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Complete genome sequence of Enterococcus faecium strain AK_C_05 with potential characteristics applicable in livestock industry

Authors :
Hyunok Doo
Jin Ho Cho
Minho Song
Eun Sol Kim
Sheena Kim
Gi Beom Keum
Jinok Kwak
Sriniwas Pandey
Sumin Ryu
Yejin Choi
Juyoun Kang
Hyeun Bum Kim
Ju-Hoon Lee
Source :
Journal of Animal Science and Technology, Vol 66, Iss 2, Pp 438-441 (2024)
Publication Year :
2024
Publisher :
Korean Society of Animal Sciences and Technology, 2024.

Abstract

The Enterococcus faecium (E. faecium) strain AK_C_05 was isolated from cheonggukjang, the Korean traditional food, collected from a local market in South Korea. In this report, we presented the complete genome sequence of E. faecium strain AK_C_05. The genome of E. faecium strain AK_C_05 genome consisted of one circular chromosome (2,691,319 bp) with a guanine + cytosine (GC) content of 38.3% and one circular plasmid (177,732 bp) with a GC content of 35.48%. The Annotation results revealed 2,827 protein-coding sequences (CDSs), 18 rRNAs, and 68 tRNA genes. It possesses genes, which encodes enzymes such as alpha-galactosidase (EC 3.2.1.22), beta-glucosidase (EC 3.2.1.21) and alpha-L-arabinofuranosidase (EC 3.2.1.55) enabling efficient utilization of carbohydrates. Based on Clusters of Orthologous Groups analysis, E. faecium strain AK_C_05 showed specialization in carbohydrate transport and metabolism indicating the ability to generate energy using a variety of carbohydrates.

Details

Language :
English
ISSN :
26720191 and 20550391
Volume :
66
Issue :
2
Database :
Directory of Open Access Journals
Journal :
Journal of Animal Science and Technology
Publication Type :
Academic Journal
Accession number :
edsdoj.86bc4c845d7a4aac934ec4b6805620df
Document Type :
article
Full Text :
https://doi.org/10.5187/jast.2023.e103