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Macrophages and monocytes mediated activation of oxidative phosphorylation implicated the prognosis and clinical therapeutic strategy of Wilms tumour

Authors :
Jialin Meng
Yonghao Chen
Xiaofan Lu
Qintao Ge
Feixiang Yang
Suwen Bai
Chaozhao Liang
Juan Du
Source :
Computational and Structural Biotechnology Journal, Vol 20, Iss , Pp 3399-3408 (2022)
Publication Year :
2022
Publisher :
Elsevier, 2022.

Abstract

Wilms tumour is the fourth leading cause of paediatric malignancy, but the detailed relationship between the tumour microenvironment and prognosis remains largely unclear. In this research, gene expression profile and clinical information from TARGET and the First Affiliated Hospital of Anhui Medical University were collected. After comparing the prognostic value of the associated immune cells, we established a nomogram to predict the prognosis of Wilms tumour based on monocyte infiltration, macrophage infiltration, stage, and sex. Further results showed that the most significant relationship between matrix metallopeptidase 9 and prognosis or macrophage infiltration. Meanwhile, by gene set enrichment or variation analyses and immunohistochemistry staining, we demonstrated that the most highly enriched hub genes were closely related to the activated oxidative phosphorylation pathway. Finally, through tumour immune dysfunction and an exclusion algorithm, the satisfactory discriminative performance of our nomogram was revealed for predicting the response to clinical therapy. Anti-PD1 therapy is more suitable for Wilms tumour patients with high nomogram points, and chemotherapies are more effective for patients with low nomogram score.

Details

Language :
English
ISSN :
20010370
Volume :
20
Issue :
3399-3408
Database :
Directory of Open Access Journals
Journal :
Computational and Structural Biotechnology Journal
Publication Type :
Academic Journal
Accession number :
edsdoj.893f1032cbf446d893b66ffb56bc80e8
Document Type :
article
Full Text :
https://doi.org/10.1016/j.csbj.2022.06.052