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Characterization of the complete chloroplast genome sequence of Actinidia kolomikta

Authors :
Dongping Qiu
Ping Tang
Xiaohong Yao
Source :
Mitochondrial DNA. Part B. Resources, Vol 6, Iss 3, Pp 1129-1130 (2021)
Publication Year :
2021
Publisher :
Taylor & Francis Group, 2021.

Abstract

The whole complete chloroplast (cp) genome sequence of Actinidia kolomikta (formerly A. maloide) was sequenced and assembled from Illumina paired-end sequencing. The cp genome of A. arguta was 157,425 bp long, containing a large single copy region (LSC) of 88,498 bp and a small single copy region (SSC) of 20,475 bp and a pair of inverted repeat regions (IR) of 242,266 bp. It contained 113 different genes, including 79 protein-coding genes, 30 tRNA genes, 4 ribosomal RNA genes. Phylogenetic analysis using concatenated alignments of whole cp genome sequences revealed that A. kolomikta was the sister group to all other groups of Actinidia

Details

Language :
English
ISSN :
23802359
Volume :
6
Issue :
3
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.91ee434bb89249aeb2f04a08de1e9f04
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2021.1902408