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Modeling Population Growth in R with the biogrowth Package

Authors :
Alberto Garre
Jeroen Koomen
Heidy M. W. den Besten
Marcel H. Zwietering
Source :
Journal of Statistical Software, Vol 107, Iss 1 (2023)
Publication Year :
2023
Publisher :
Foundation for Open Access Statistics, 2023.

Abstract

The growth of populations is of interest in a broad variety of fields, such as epidemiology, economics or biology. Although a large variety of growth models are available in the scientific literature, their application usually requires advanced knowledge of mathematical programming and statistical inference, especially when modelling growth under dynamic environmental conditions. This article presents the biogrowth package for R, which implements functions for modelling the growth of populations. It can predict growth under static or dynamic environments, considering the effect of an arbitrary number of environmental factors. Moreover, it can be used to fit growth models to data gathered under static or dynamic environmental conditions. The package allows the user to fix any model parameter prior to the fit, an approach that can mitigate identifiability issues associated to growth models. The package includes common S3 methods for visualization and statistical analysis (summary of the fit, predictions, . . . ), easing result interpretation. It also includes functions for model comparison/selection. We illustrate the functions in biogrowth using examples from food science and economy.

Details

Language :
English
ISSN :
15487660
Volume :
107
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Journal of Statistical Software
Publication Type :
Academic Journal
Accession number :
edsdoj.936c686b92764b90b6c7c8056ede72c0
Document Type :
article
Full Text :
https://doi.org/10.18637/jss.v107.i01