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Draft genome sequence data of Pythium cedri Chen 4, the causal pathogen of deodar cedar root rot

Authors :
Jin-Feng Peng
Yusufjon Gafforov
Jian Yu
Hong-Jun Yang
Yuan-Yuan Chen
Yi-Fan Xing
Jia-Jia Chen
Source :
Data in Brief, Vol 57, Iss , Pp 110930- (2024)
Publication Year :
2024
Publisher :
Elsevier, 2024.

Abstract

Pythium species are distributed globally, with certain members playing significant roles as plant and animal pathogens. Pythium cedri Chen 4 has been identified as a pathogenic isolate responsible for causing root rot on Cedrus deodara. Here, a comprehensive genome-wide sequence of P. cedri strain Chen 4 utilizing the Illumina NovaSeq sequencing platform and a Pacific Biosciences Sequel sequencing platform is presented. The genome of P. cedri strain Chen 4 was assembled into 150 contigs containing a combined size of 41.25 Mb, N50 value of 1,717,859 bp and N90 value of 431,829 bp. Genome annotation revealed 14,077 protein-encoding genes and 364 of the 1016 predicted proteins were putative effectors. The present work enriches the genetic resources of P. cedri for studying its evolution and can contribute to a better understanding of P. cedri–host interaction.

Details

Language :
English
ISSN :
23523409
Volume :
57
Issue :
110930-
Database :
Directory of Open Access Journals
Journal :
Data in Brief
Publication Type :
Academic Journal
Accession number :
edsdoj.947a18b7933340148cde0737c7d628c3
Document Type :
article
Full Text :
https://doi.org/10.1016/j.dib.2024.110930