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Single-cell transcriptomics of the goldfish retina reveals genetic divergence in the asymmetrically evolved subgenomes after allotetraploidization

Authors :
Tetsuo Kon
Kentaro Fukuta
Zelin Chen
Koto Kon-Nanjo
Kota Suzuki
Masakazu Ishikawa
Hikari Tanaka
Shawn M. Burgess
Hideki Noguchi
Atsushi Toyoda
Yoshihiro Omori
Source :
Communications Biology, Vol 5, Iss 1, Pp 1-16 (2022)
Publication Year :
2022
Publisher :
Nature Portfolio, 2022.

Abstract

An integrated scRNA-seq and scATAC-seq analysis of retina from the goldfish, Carassius auratus, reveals global biases in expression patterns between the two (L and S) subgenomes that resulted from ancestral whole-genome duplication.

Subjects

Subjects :
Biology (General)
QH301-705.5

Details

Language :
English
ISSN :
23993642
Volume :
5
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Communications Biology
Publication Type :
Academic Journal
Accession number :
edsdoj.9a4bfdaaa67440009448d987b0ae4530
Document Type :
article
Full Text :
https://doi.org/10.1038/s42003-022-04351-3