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In-silico approach to identify novel potent inhibitors against GraR of S. aureus

Authors :
Poonam Dhankhar
Vikram Dalal
Dasantila Golemi-Kotra
Pravindra Kumar
Source :
Frontiers in Bioscience-Landmark, Vol 25, Iss 7, Pp 1337-1360 (2020)
Publication Year :
2020
Publisher :
IMR Press, 2020.

Abstract

With rising antibiotic resistance at alarming rates in S. aureus, a major human pathogen, it is important to identify targets for new antimicrobial therapies. A number of two-component systems (TCS) have been implicated in S. aureus resistance to several antibiotics. The glycopeptide-resistance associated TCS, GraSR, is involved in cationic antimicrobial peptides (CAMPs) resistance through the regulation of mprF, dltABCD, and vraFG operons. GraS is a sensor histidine kinase, while GraR is a response regulator transcription factor, which is potential drug target. In lieu of the significance of GraSR in antibiotic resistance and the lack of structural studies on GraR, we undertook to determine the GraR structure through homology modelling. A series of small molecules were virtually screened and the top-scored molecules were analyzed for different pharmacophore properties and assessed for their binding potency to GraR (IC50). Further, a molecular dynamics simulation study of GraR-ligand complexes revealed that the predicted molecules exhibited good binding affinities at the dimerization interface of GraR. Thus, these molecules could be suitable inhibitors for the GraR-mediated signalling processes, which may be further utilized to develop novel antimicrobial agents against S. aureus.

Details

Language :
English
ISSN :
27686701
Volume :
25
Issue :
7
Database :
Directory of Open Access Journals
Journal :
Frontiers in Bioscience-Landmark
Publication Type :
Academic Journal
Accession number :
edsdoj.bc33fab5f5644208b97df25781805e41
Document Type :
article
Full Text :
https://doi.org/10.2741/4859