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Landscape of allele-specific transcription factor binding in the human genome

Authors :
Sergey Abramov
Alexandr Boytsov
Daria Bykova
Dmitry D. Penzar
Ivan Yevshin
Semyon K. Kolmykov
Marina V. Fridman
Alexander V. Favorov
Ilya E. Vorontsov
Eugene Baulin
Fedor Kolpakov
Vsevolod J. Makeev
Ivan V. Kulakovskiy
Source :
Nature Communications, Vol 12, Iss 1, Pp 1-15 (2021)
Publication Year :
2021
Publisher :
Nature Portfolio, 2021.

Abstract

Single-nucleotide variants in enhancers or promoters may affect gene transcription by altering transcription factor binding sites. Here the authors present a meta-analysis empowered by a new statistical method covering thousands of ChIP-Seq experiments resulting in the identification of more than 500 thousand allele-specific binding (ASB) events in the human genome.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
12
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.fb8abbc7f0654d9bb7b8ee5f2d4d9a03
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-021-23007-0