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An evolutionarily significant unicellular strategy in response to starvation in Dictyostelium social amoebae [version 2; referees: 2 approved]

Authors :
Darja Dubravcic
Minus van Baalen
Clément Nizak
Author Affiliations :
<relatesTo>1</relatesTo>CNRS, LIPHY, F-38000 Grenoble, France<br /><relatesTo>2</relatesTo>Laboratory of Ecology and Evolution, CNRS UMR7625, Ecole Normale Supérieure, Université Pierre et Marie Curie, Paris Universitas, CNRS, Paris, France<br /><relatesTo>3</relatesTo>Laboratory of Biochemistry, UMR 8231 ESPCI ParisTech/CNRS, PSL Research University, Paris, France
Source :
F1000Research. 3:133
Publication Year :
2014
Publisher :
London, UK: F1000 Research Limited, 2014.

Abstract

The social amoeba Dictyostelium discoideum is widely studied for its multicellular development program as a response to starvation. Aggregates of up to 10 6 cells form fruiting bodies containing (i) dormant spores (~80%) that can persist for months in the absence of nutrients, and (ii) dead stalk cells (~20%) that promote the dispersion of the spores towards nutrient-rich areas. It is often overlooked that not all cells aggregate upon starvation. Using a new quantitative approach based on time-lapse fluorescence microscopy and a low ratio of reporting cells, we have quantified this fraction of non-aggregating cells. In realistic starvation conditions, up to 15% of cells do not aggregate, which makes this third cell fate a significant component of the population-level response of social amoebae to starvation. Non-aggregating cells have an advantage over cells in aggregates since they resume growth earlier upon arrival of new nutrients, but have a shorter lifespan under prolonged starvation. We find that phenotypic heterogeneities linked to cell nutritional state bias the representation of cells in the aggregating vs. non-aggregating fractions, and thus affect population partitioning. Next, we report that the fraction of non-aggregating cells depends on genetic factors that regulate the timing of starvation, signal sensing efficiency and aggregation efficiency. In addition, interactions between clones in mixtures of non-isogenic cells affect the partitioning of each clone into both fractions. We further build a numerical model to test the evolutionary significance of the non-aggregating cell fraction. The partitioning of cells into aggregating and non-aggregating fractions is optimal in fluctuating environments with an unpredictable duration of starvation periods. Our study highlights the unicellular component of the response of social amoebae to starvation, and thus extends its evolutionary and ecological framework.

Details

ISSN :
20461402
Volume :
3
Database :
F1000Research
Journal :
F1000Research
Notes :
Revised Amendments from Version 1 We have corrected our abstract and conclusions in the discussion section concerning the implications of our results regarding a bet-hedging strategy in Dictyostelium populations. Our text now clearly states that our results strongly suggest such a strategy but do not demonstrate it formally. We have clarified the paragraph concerning genetic factors that affect population partitioning. Our previous version was entitled "genetics of population partitioning..." which led to confusions since "genetics" refers traditionally to a genetic analysis through a screen to isolate new mutants and corresponding genomic mutations, which we have not performed. Rather, our study demonstrates that genetic factors do affect the partitioning process (using already well-known mutants isolated by others), and we further show that different genetic clones affect each other's partitioning in mixtures. We have corrected the paragraph title as well as a few sentences to cover these two kinds of results without employing the term "genetics". We believe the formulation is now precise, unambiguous, and clearly explains the meaning, implications and importance of this set of results. We have removed anthropomorphic terms in one paragraph at the end of the discussion section, as suggested by Prof. Paul Rainey. We agree that these terms when used to qualify amoebae, although often employed in the field, may cause misinterpretations of results. We have kept these terms (between quotation marks) in the next paragraph that connects our results with game theory concepts because there is no possible confusion in the context of this type of mathematical theory and models. We have added the number of performed experiments in figure legends next to the error bar definition (the raw data already contained all these details). We have corrected a few typos, added one reference and removed the word 'stress' from the title., , [version 2; referees: 2 approved]
Publication Type :
Academic Journal
Accession number :
edsfor.10.12688.f1000research.4218.2
Document Type :
research-article
Full Text :
https://doi.org/10.12688/f1000research.4218.2