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Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture

Authors :
Berndt, Sonja I.
Gustafsson, Stefan
Mägi, Reedik
Ganna, Andrea
Wheeler, Eleanor
Feitosa, Mary F.
Justice, Anne E.
Monda, Keri L.
Croteau-Chonka, Damien C.
Day, Felix R.
Esko, Tõnu
Fall, Tove
Ferreira, Teresa
Gentilini, Davide
Jackson, Anne U.
Luan, Jian’an
Randall, Joshua C.
Vedantam, Sailaja
Willer, Cristen J.
Winkler, Thomas W.
Wood, Andrew R.
Workalemahu, Tsegaselassie
Hu, Yi-Juan
Lee, Sang Hong
Liang, Liming
Lin, Dan-Yu
Min, Josine L.
Neale, Benjamin M.
Thorleifsson, Gudmar
Yang, Jian
Albrecht, Eva
Amin, Najaf
Bragg-Gresham, Jennifer L.
Cadby, Gemma
den Heijer, Martin
Eklund, Niina
Fischer, Krista
Goel, Anuj
Hottenga, Jouke-Jan
Huffman, Jennifer E.
Jarick, Ivonne
Johansson, Åsa
Johnson, Toby
Kanoni, Stavroula
Kleber, Marcus E.
König, Inke R.
Kristiansson, Kati
Kutalik, Zoltán
Lamina, Claudia
Lecoeur, Cecile
Li, Guo
Mangino, Massimo
McArdle, Wendy L.
Medina-Gomez, Carolina
Müller-Nurasyid, Martina
Ngwa, Julius S.
Nolte, Ilja M.
Paternoster, Lavinia
Pechlivanis, Sonali
Perola, Markus
Peters, Marjolein J.
Preuss, Michael
Rose, Lynda M.
Shi, Jianxin
Shungin, Dmitry
Smith, Albert Vernon
Strawbridge, Rona J.
Surakka, Ida
Teumer, Alexander
Trip, Mieke D.
Tyrer, Jonathan
Van Vliet-Ostaptchouk, Jana V.
Vandenput, Liesbeth
Waite, Lindsay L.
Zhao, Jing Hua
Absher, Devin
Asselbergs, Folkert W.
Atalay, Mustafa
Attwood, Antony P.
Balmforth, Anthony J.
Basart, Hanneke
Beilby, John
Bonnycastle, Lori L.
Brambilla, Paolo
Bruinenberg, Marcel
Campbell, Harry
Chasman, Daniel I.
Chines, Peter S.
Collins, Francis S.
Connell, John M.
Cookson, William
de Faire, Ulf
de Vegt, Femmie
Dei, Mariano
Dimitriou, Maria
Edkins, Sarah
Estrada, Karol
Evans, David M.
Farrall, Martin
Ferrario, Marco M.
Ferrières, Jean
Franke, Lude
Frau, Francesca
Gejman, Pablo V.
Grallert, Harald
Grönberg, Henrik
Gudnason, Vilmundur
Hall, Alistair S.
Hall, Per
Hartikainen, Anna-Liisa
Hayward, Caroline
Heard-Costa, Nancy L.
Heath, Andrew C.
Hebebrand, Johannes
Homuth, Georg
Hu, Frank B.
Hunt, Sarah E.
Hyppönen, Elina
Iribarren, Carlos
Jacobs, Kevin B.
Jansson, John-Olov
Jula, Antti
Kähönen, Mika
Kathiresan, Sekar
Kee, Frank
Khaw, Kay-Tee
Kivimaki, Mika
Koenig, Wolfgang
Kraja, Aldi T.
Kumari, Meena
Kuulasmaa, Kari
Kuusisto, Johanna
Laitinen, Jaana H.
Lakka, Timo A.
Langenberg, Claudia
Launer, Lenore J.
Lind, Lars
Lindström, Jaana
Liu, Jianjun
Liuzzi, Antonio
Lokki, Marja-Liisa
Lorentzon, Mattias
Madden, Pamela A.
Magnusson, Patrik K.
Manunta, Paolo
Marek, Diana
März, Winfried
Mateo Leach, Irene
McKnight, Barbara
Medland, Sarah E.
Mihailov, Evelin
Milani, Lili
Montgomery, Grant W.
Mooser, Vincent
Mühleisen, Thomas W.
Munroe, Patricia B.
Musk, Arthur W.
Narisu, Narisu
Navis, Gerjan
Nicholson, George
Nohr, Ellen A.
Ong, Ken K.
Oostra, Ben A.
Palmer, Colin N.A.
Palotie, Aarno
Peden, John F.
Pedersen, Nancy
Peters, Annette
Polasek, Ozren
Pouta, Anneli
Pramstaller, Peter P.
Prokopenko, Inga
Pütter, Carolin
Radhakrishnan, Aparna
Raitakari, Olli
Rendon, Augusto
Rivadeneira, Fernando
Rudan, Igor
Saaristo, Timo E.
Sambrook, Jennifer G.
Sanders, Alan R.
Sanna, Serena
Saramies, Jouko
Schipf, Sabine
Schreiber, Stefan
Schunkert, Heribert
Shin, So-Youn
Signorini, Stefano
Sinisalo, Juha
Skrobek, Boris
Soranzo, Nicole
Stančáková, Alena
Stark, Klaus
Stephens, Jonathan C.
Stirrups, Kathleen
Stolk, Ronald P.
Stumvoll, Michael
Swift, Amy J.
Theodoraki, Eirini V.
Thorand, Barbara
Tregouet, David-Alexandre
Tremoli, Elena
Van der Klauw, Melanie M.
van Meurs, Joyce B.J.
Vermeulen, Sita H.
Viikari, Jorma
Virtamo, Jarmo
Vitart, Veronique
Waeber, Gérard
Wang, Zhaoming
Widén, Elisabeth
Wild, Sarah H.
Willemsen, Gonneke
Winkelmann, Bernhard R.
Witteman, Jacqueline C.M.
Wolffenbuttel, Bruce H.R.
Wong, Andrew
Wright, Alan F.
Zillikens, M. Carola
Amouyel, Philippe
Boehm, Bernhard O.
Boerwinkle, Eric
Boomsma, Dorret I.
Caulfield, Mark J.
Chanock, Stephen J.
Cupples, L. Adrienne
Cusi, Daniele
Dedoussis, George V.
Erdmann, Jeanette
Eriksson, Johan G.
Franks, Paul W.
Froguel, Philippe
Gieger, Christian
Gyllensten, Ulf
Hamsten, Anders
Harris, Tamara B.
Hengstenberg, Christian
Hicks, Andrew A.
Hingorani, Aroon
Hinney, Anke
Hofman, Albert
Hovingh, Kees G.
Hveem, Kristian
Illig, Thomas
Jarvelin, Marjo-Riitta
Jöckel, Karl-Heinz
Keinanen-Kiukaanniemi, Sirkka M.
Kiemeney, Lambertus A.
Kuh, Diana
Laakso, Markku
Lehtimäki, Terho
Levinson, Douglas F.
Martin, Nicholas G.
Metspalu, Andres
Morris, Andrew D.
Nieminen, Markku S.
Njølstad, Inger
Ohlsson, Claes
Oldehinkel, Albertine J.
Ouwehand, Willem H.
Palmer, Lyle J.
Penninx, Brenda
Power, Chris
Province, Michael A.
Psaty, Bruce M.
Qi, Lu
Rauramaa, Rainer
Ridker, Paul M.
Ripatti, Samuli
Salomaa, Veikko
Samani, Nilesh J.
Snieder, Harold
Sørensen, Thorkild I.A.
Spector, Timothy D.
Stefansson, Kari
Tönjes, Anke
Tuomilehto, Jaakko
Uitterlinden, André G.
Uusitupa, Matti
van der Harst, Pim
Vollenweider, Peter
Wallaschofski, Henri
Wareham, Nicholas J.
Watkins, Hugh
Wichmann, H.-Erich
Wilson, James F.
Abecasis, Goncalo R.
Assimes, Themistocles L.
Barroso, Inês
Boehnke, Michael
Borecki, Ingrid B.
Deloukas, Panos
Fox, Caroline S.
Frayling, Timothy
Groop, Leif C.
Haritunian, Talin
Heid, Iris M.
Hunter, David
Kaplan, Robert C.
Karpe, Fredrik
Moffatt, Miriam
Mohlke, Karen L.
O’Connell, Jeffrey R.
Pawitan, Yudi
Schadt, Eric E.
Schlessinger, David
Steinthorsdottir, Valgerdur
Strachan, David P.
Thorsteinsdottir, Unnur
van Duijn, Cornelia M.
Visscher, Peter M.
Di Blasio, Anna Maria
Hirschhorn, Joel N.
Lindgren, Cecilia M.
Morris, Andrew P.
Meyre, David
Scherag, André
McCarthy, Mark I.
Speliotes, Elizabeth K.
North, Kari E.
Loos, Ruth J.F.
Ingelsson, Erik
Source :
Berndt, S. I., S. Gustafsson, R. Mägi, A. Ganna, E. Wheeler, M. F. Feitosa, A. E. Justice, et al. 2014. “Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.” Nature genetics 45 (5): 501-512. doi:10.1038/ng.2606. http://dx.doi.org/10.1038/ng.2606.
Publication Year :
2014

Abstract

Approaches exploiting extremes of the trait distribution may reveal novel loci for common traits, but it is unknown whether such loci are generalizable to the general population. In a genome-wide search for loci associated with upper vs. lower 5th percentiles of body mass index, height and waist-hip ratio, as well as clinical classes of obesity including up to 263,407 European individuals, we identified four new loci (IGFBP4, H6PD, RSRC1, PPP2R2A) influencing height detected in the tails and seven new loci (HNF4G, RPTOR, GNAT2, MRPS33P4, ADCY9, HS6ST3, ZZZ3) for clinical classes of obesity. Further, we show that there is large overlap in terms of genetic structure and distribution of variants between traits based on extremes and the general population and little etiologic heterogeneity between obesity subgroups.

Details

Language :
English
ISSN :
10614036
Database :
Digital Access to Scholarship at Harvard (DASH)
Journal :
Berndt, S. I., S. Gustafsson, R. Mägi, A. Ganna, E. Wheeler, M. F. Feitosa, A. E. Justice, et al. 2014. “Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.” Nature genetics 45 (5): 501-512. doi:10.1038/ng.2606. http://dx.doi.org/10.1038/ng.2606.
Publication Type :
Academic Journal
Accession number :
edshld.1.12152861
Document Type :
Journal Article
Full Text :
https://doi.org/10.1038/ng.2606