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Automated matching of two-time X-ray photon correlation mans from phase-separating proteins with Cahn-Hilliard-type simulations using auto-encoder networks

Authors :
Timmermann, Sonja
Starostin, Vladimir
Girelli, Anita
Ragulskaya, Anastasia
Rahmann, Hendrik
Reiser, Mario
Begam, Nafisa
Randolph, Lisa
Sprung, Michael
Westermeier, Fabian
Zhang, Fajun
Schreiber, Frank
Gutt, Christian
Timmermann, Sonja
Starostin, Vladimir
Girelli, Anita
Ragulskaya, Anastasia
Rahmann, Hendrik
Reiser, Mario
Begam, Nafisa
Randolph, Lisa
Sprung, Michael
Westermeier, Fabian
Zhang, Fajun
Schreiber, Frank
Gutt, Christian
Publication Year :
2022

Abstract

Machine learning methods are used for an automated classification of experimental two-time X-ray photon correlation maps from an arrested liquid–liquid phase separation of a protein solution. The correlation maps are matched with correlation maps generated with Cahn–Hilliard-type simulations of liquid–liquid phase separations according to two simulation parameters and in the last step interpreted in the framework of the simulation. The matching routine employs an auto-encoder network and a differential evolution based algorithm. The method presented here is a first step towards handling large amounts of dynamic data measured at high-brilliance synchrotron and X-ray free-electron laser sources, facilitating fast comparison with phase field models of phase separation.

Details

Database :
OAIster
Notes :
English
Publication Type :
Electronic Resource
Accession number :
edsoai.on1356421617
Document Type :
Electronic Resource
Full Text :
https://doi.org/10.1107.S1600576722004435