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The genetic determinants of recurrent somatic mutations in 43,693 blood genomes.

Authors :
Weinstock, Joshua S
Weinstock, Joshua S
Laurie, Cecelia A
Broome, Jai G
Taylor, Kent D
Guo, Xiuqing
Shuldiner, Alan R
O'Connell, Jeffrey R
Lewis, Joshua P
Boerwinkle, Eric
Barnes, Kathleen C
Chami, Nathalie
Kenny, Eimear E
Loos, Ruth JF
Fornage, Myriam
Redline, Susan
Cade, Brian E
Gilliland, Frank D
Chen, Zhanghua
Gauderman, W James
Kumar, Rajesh
Grammer, Leslie
Schleimer, Robert P
Psaty, Bruce M
Bis, Joshua C
Brody, Jennifer A
Silverman, Edwin K
Yun, Jeong H
Qiao, Dandi
Weiss, Scott T
Lasky-Su, Jessica
DeMeo, Dawn L
Palmer, Nicholette D
Freedman, Barry I
Bowden, Donald W
Cho, Michael H
Vasan, Ramachandran S
Johnson, Andrew D
Yanek, Lisa R
Becker, Lewis C
Kardia, Sharon
He, Jiang
Kaplan, Robert
Heckbert, Susan R
Smith, Nicholas L
Wiggins, Kerri L
Arnett, Donna K
Irvin, Marguerite R
Tiwari, Hemant
Correa, Adolfo
Raffield, Laura M
Gao, Yan
de Andrade, Mariza
Rotter, Jerome I
Rich, Stephen S
Manichaikul, Ani W
Konkle, Barbara A
Johnsen, Jill M
Wheeler, Marsha M
Custer, Brian S
Duggirala, Ravindranath
Curran, Joanne E
Blangero, John
Gui, Hongsheng
Xiao, Shujie
Williams, L Keoki
Meyers, Deborah A
Li, Xingnan
Ortega, Victor
McGarvey, Stephen
Gu, C Charles
Chen, Yii-Der Ida
Lee, Wen-Jane
Shoemaker, M Benjamin
Darbar, Dawood
Roden, Dan
Albert, Christine
Kooperberg, Charles
Desai, Pinkal
Blackwell, Thomas W
Abecasis, Goncalo R
Smith, Albert V
Kang, Hyun M
Mathias, Rasika
Natarajan, Pradeep
Jaiswal, Siddhartha
Reiner, Alexander P
Bick, Alexander G
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
Weinstock, Joshua S
Weinstock, Joshua S
Laurie, Cecelia A
Broome, Jai G
Taylor, Kent D
Guo, Xiuqing
Shuldiner, Alan R
O'Connell, Jeffrey R
Lewis, Joshua P
Boerwinkle, Eric
Barnes, Kathleen C
Chami, Nathalie
Kenny, Eimear E
Loos, Ruth JF
Fornage, Myriam
Redline, Susan
Cade, Brian E
Gilliland, Frank D
Chen, Zhanghua
Gauderman, W James
Kumar, Rajesh
Grammer, Leslie
Schleimer, Robert P
Psaty, Bruce M
Bis, Joshua C
Brody, Jennifer A
Silverman, Edwin K
Yun, Jeong H
Qiao, Dandi
Weiss, Scott T
Lasky-Su, Jessica
DeMeo, Dawn L
Palmer, Nicholette D
Freedman, Barry I
Bowden, Donald W
Cho, Michael H
Vasan, Ramachandran S
Johnson, Andrew D
Yanek, Lisa R
Becker, Lewis C
Kardia, Sharon
He, Jiang
Kaplan, Robert
Heckbert, Susan R
Smith, Nicholas L
Wiggins, Kerri L
Arnett, Donna K
Irvin, Marguerite R
Tiwari, Hemant
Correa, Adolfo
Raffield, Laura M
Gao, Yan
de Andrade, Mariza
Rotter, Jerome I
Rich, Stephen S
Manichaikul, Ani W
Konkle, Barbara A
Johnsen, Jill M
Wheeler, Marsha M
Custer, Brian S
Duggirala, Ravindranath
Curran, Joanne E
Blangero, John
Gui, Hongsheng
Xiao, Shujie
Williams, L Keoki
Meyers, Deborah A
Li, Xingnan
Ortega, Victor
McGarvey, Stephen
Gu, C Charles
Chen, Yii-Der Ida
Lee, Wen-Jane
Shoemaker, M Benjamin
Darbar, Dawood
Roden, Dan
Albert, Christine
Kooperberg, Charles
Desai, Pinkal
Blackwell, Thomas W
Abecasis, Goncalo R
Smith, Albert V
Kang, Hyun M
Mathias, Rasika
Natarajan, Pradeep
Jaiswal, Siddhartha
Reiner, Alexander P
Bick, Alexander G
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
Source :
Science advances; vol 9, iss 17, eabm4945; 2375-2548
Publication Year :
2023

Abstract

Nononcogenic somatic mutations are thought to be uncommon and inconsequential. To test this, we analyzed 43,693 National Heart, Lung and Blood Institute Trans-Omics for Precision Medicine blood whole genomes from 37 cohorts and identified 7131 non-missense somatic mutations that are recurrently mutated in at least 50 individuals. These recurrent non-missense somatic mutations (RNMSMs) are not clearly explained by other clonal phenomena such as clonal hematopoiesis. RNMSM prevalence increased with age, with an average 50-year-old having 27 RNMSMs. Inherited germline variation associated with RNMSM acquisition. These variants were found in genes involved in adaptive immune function, proinflammatory cytokine production, and lymphoid lineage commitment. In addition, the presence of eight specific RNMSMs associated with blood cell traits at effect sizes comparable to Mendelian genetic mutations. Overall, we found that somatic mutations in blood are an unexpectedly common phenomenon with ancestry-specific determinants and human health consequences.

Details

Database :
OAIster
Journal :
Science advances; vol 9, iss 17, eabm4945; 2375-2548
Notes :
application/pdf, Science advances vol 9, iss 17, eabm4945 2375-2548
Publication Type :
Electronic Resource
Accession number :
edsoai.on1391579907
Document Type :
Electronic Resource