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Considerations and consequences of allowing DNA sequence data as types of fungal taxa

Authors :
Zamora, Juan Carlos
Svensson, Måns
Kirschner, Roland
Olariaga, Ibai
Ryman, Svengunnar
Parra, Luis Alberto
Geml, József
Rosling, Anna
Adamčík, Slavomír
Ahti, Teuvo
Aime, M. Catherine
Ainsworth, A. Martyn
Albert, László
Albertó, Edgardo
Altés García, Alberto
Ageev, Dmitry
Agerer, Reinhard
Aguirre-Hudson, Begoña
Ammirati, Joe
Andersson, Harry
Angelini, Claudio
Antonín, Vladimír
Aoki, Takayuki
Aptroot, André
Argaud, Didier
Arguello Sosa, Blanca Imelda
Aronsen, Arne
Arup, Ulf
Asgari, Bita
Assyov, Boris
Atienza, Violeta
Bandini, Ditte
Baptista-Ferreira, João Luís
Baral, Hans-Otto
Baroni, Tim
Barreto, Robert Weingart
Beker, Henry
Bell, Ann
Bellanger, Jean-Michel
Bellù, Francesco
Bemmann, Martin
Bendiksby, Mika
Bendiksen, Egil
Bendiksen, Katriina
Benedek, Lajos
Bérešová-Guttová, Anna
Berger, Franz
Berndt, Reinhard
Bernicchia, Annarosa
Biketova, Alona Yu.
Bizio, Enrico
Bjork, Curtis
Boekhout, Teun
Boertmann, David
Böhning, Tanja
Boittin, Florent
Boluda, Carlos G.
Boomsluiter, Menno W.
Borovička, Jan
Brandrud, Tor Erik
Braun, Uwe
Brodo, Irwin
Bulyonkova, Tatiana
Burdsall, Harold H.
Buyck, Bart
Burgaz Moreno, Ana Rosa
Calatayud, Vicent
Callac, Philippe
Campo, Emanuele
Candusso, Massimo
Capoen, Brigitte
Carbó, Joaquim
Carbone, Matteo
Castañeda-Ruiz, Rafael F.
Castellano, Michael A.
Chen, Jie
Clerc, Philippe
Consiglio, Giovanni
Corriol, Gilles
Courtecuisse, Régis
Crespo De Las Casas, Ana María
Cripps, Cathy
Crous, Pedro W.
da Silva, Gladstone Alves
da Silva, Meiriele
Dam, Marjo
Dam, Nico
Dämmrich, Frank
Das, Kanad
Davies, Linda
De Crop, Eske
De Kesel, Andre
De Lange, Ruben
De Madrignac BonziBárbara, Bárbara
de la Cruz, Thomas Edison E.
Delgat, Lynn
Demoulin, Vincent
Desjardin, Dennis E.
Diederich, Paul
Dima, Bálint
Dios, Maria Martha
Douanla-Meli, Clovis
Douglas, Brian
Drechsler-Santos, Elisandro Ricardo
Dulare Devi, Pradeep Divakar
Dyer, Paul S.
Eberhardt, Ursula
Ertz, Damien
Esteve-Raventós, Fernando
Etayo Salazar, Javier Angel
Evenson, Vera
Eyssartier, Guillaume
Farkas, Edit
Favre, Alain
Fedosova, Anna G.
Filippa, Mario
Finy, Péter
Flakus, Adam
Fos, Simón
Fournier, Jacques
Fraiture, André
Franchi, Paolo
Franco Molano, Ana Esperanza
Friebes, Gernot
Frisch, Andreas
Fryday, Alan
Furci, Giuliana
Galán Márquez, Ricardo
Garbelotto, Matteo
García-Martín, Joaquina María
García Otálora, Mónica A.
García Sánchez, Dania
Gardiennet, Alain
Garnica, Sigisfredo
Garrido Benavent, Isaac
Gates, Genevieve
Lima da Gerlach, Alice Cruz
Ghobad-Nejhad, Masoomeh
Gibertoni, Tatiana B.
Grebenc, Tine
Greilhuber, Irmgard
Grishkan, Bella
Groenewald, Johannes Z.
Grube, Martin
Gruhn, Gérald
Gueidan, Cécile
Gulden, Gro
Gusmão, Luis F. P.
Hafellner, Josef
Hairaud, Michel
Halama, Marek
Hallenberg, Nils
Halling, Roy E.
Hansen, Karen
Harder, Christoffer Bugge
Heilmann-Clausen, Jacob
Helleman, Stip
Henriot, Alain
Hernandez-Restrepo, Margarita
Herve, Raphaël
Hobart, Caroline
Hoffmeister, Mascha
Høiland, Klaus
Holec, Jan
Holien, Håkon
Hughes, Karen
Hubka, Vit
Huhtinen, Seppo
Ivančević, Boris
Jagers, Marian
Jaklitsch, Walter
Jansen, Anna Elise
Jayawardena, Ruvishika S.
Jiménez Rico, Víctor
Jeppesen, Thomas Stjernegaard
Jeppson, Mikael
Johnston, Peter
Jørgensen, Per Magnus
Kärnefelt, Ingvar
Kalinina, Liudmila B.
Kantvilas, Gintaras
Karadelev, Mitko
Kasuya, Taiga
Kautmanová, Ivona
Kerrigan, Richard W.
Kirchmair, Martin
Kiyashko, Anna
Knapp, Dániel G.
Knudsen, Henning
Knudsen, Kerry
Knutsson, Tommy
Kolařík, Miroslav
Kõljalg, Urmas
Košuthová, Alica
Koszka, Attila
Kotiranta, Heikki
Kotkova, Vera
Koukol, Ondřej
Kout, Jiří
Kovács, Gábor M.
Kříž, Martin
Kruys, Åsa
Kučera, Viktor
Kudzma, Linas
Kuhar, Francisco
Kukwa, Martin
Kumar, T. K. Arun
Kunca, Vladimír
Kušan, Ivana
Kuyper, Thomas W.
Lado, Carlos
Læssøe, Thomas
Lainé, Patrice
Langer, Ewald
Larsson, Ellen
Larsson, Karl-Henrik
Laursen, Gary
Lechat, Christian
Lee, Serena
Lendemer, James C.
Levin, Laura
Lindemann, Uwe
Lindström, Håkan
Liu, Xingzhong
Llarena Hernandez, Regulo Carlos
Llop, Esteve
Locsmándi, Csaba
Lodge, Deborah Jean
Loizides, Michael
Lőkös, László
Luangsa-ard, Jennifer
Lüderitz, Matthias
Lumbsch, Thorsten
Lutz, Matthias
Mahoney, Dan
Malysheva, Ekaterina
Malysheva, Vera
Manimohan, Patinjareveettil
Marin-Felix, Yasmina
Marques, Guilhermina
Martínez-Gil, Rubén
Marson, Guy
Mata, Gerardo
Matheny, P. Brandon
Mathiassen, Geir Harald
Matočec, Neven
Mayrhofer, Helmut
Mehrabi, Mehdi
Melo, Ireneia
Mešić, Armin
Methven, Andrew S.
Miettinen, Otto
Millanes Romero, Ana M.
Miller, Andrew N.
Mitchell, James K.
Moberg, Roland
Moreau, Pierre-Arthur
Moreno, Gabriel
Morozova, Olga
Morte, Asunción
Muggia, Lucia
Muñoz González, Guillermo
Myllys, Leena
Nagy, István
Nagy, László G.
Neves, Maria Alice
Niemelä, Tuomo
Nimis, Pier Luigi
Niveiro, Nicolas
Noordeloos, Machiel E.
Nordin, Anders
Noumeur, Sara Raouia
Novozhilov, Yuri
Nuytinck, Jorinde
Ohenoja, Esteri
Oliveira Fiuza, Patricia
Orange, Alan
Ordynets, Alexander
Ortiz-Santana, Beatriz
Pacheco, Leticia
Pál-Fám, Ferenc
Palacio, Melissa
Palice, Zdeněk
Papp, Viktor
Pärtel, Kadri
Pawlowska, Julia
Paz, Aurelia
Peintner, Ursula
Pennycook, Shaun
Liparini Pereira, Olinto
Pérez Daniëls, Pablo
Pérez-De-Gregorio Capella, Miquel À.
Pérez del Amo, Carlos Manuel
Pérez Gorjón, Sergio
Pérez-Ortega, Sergio
Pérez-Vargas, Israel
Perry, Brian A.
Petersen, Jens H.
Petersen, Ronald H.
Pfister, Donald H.
Phukhamsakda, Chayanard
Piątek, Marcin
Piepenbring, Meike
Pino Bodas, Raquel
Pinzón Esquivel, Juan Pablo
Pirot, Paul
Popov, Eugene S.
Popoff, Orlando
Prieto Álvaro, María
Printzen, Christian
Psurtseva, Nadezhda
Purahong, Witoon
Quijada, Luis
Rambold, Gerhard
Ramírez, Natalia A.
Raja, Huzefa
Raspé, Olivier
Raymundo, Tania
Réblová, Martina
Rebriev, Yury A.
Reyes García, Juan de Dios
Ribes Ripoll, Miguel Ángel
Richard, Franck
Richardson, Mike J.
Robledo, Gerardo Lucio
Rodrigues Barbosa, Flavia
Rodriguez-Caycedo, Cristina
Rodriguez-Flakus, Pamela
Ronikier, Anna
Rubio Casas, Luis
Rusevska, Katerina
Saar, Günter
Saar, Irja
Salcedo, Isabel
Salcedo Martínez, Sergio M.
Salvador Montoya, Carlos A.
Sánchez-Ramírez, Santiago
Sandoval-Sierra, J. Vladimir
Santamaria, Sergi
Santana Monteiro, Josiane
Schroers, Hans Josef
Schulz, Barbara
Schmidt-Stohn, Geert
Schumacher, Trond
Senn-Irlet, Beatrice
Ševčíková, Hana
Shchepin, Oleg
Shirouzu, Takashi
Shiryaev, Anton
Siepe, Klaus
Sir, Esteban B.
Sohrabi, Mohammad
Soop, Karl
Spirin, Viacheslav
Spribille, Toby
Stadler, Marc
Stalpers, Joost
Stenroos, Soili
Suija, Ave
Sunhede, Stellan
Svantesson, Sten
Svensson, Sigvard
Svetasheva, Tatyana Yu.
Świerkosz, Krzysztof
Tamm, Heidi
Taskin, Hatira
Taudière, Adrien
Tedebrand, Jan-Olof
Tena Lahoz, Raúl
Temina, Marina
Thell, Arne
Thines, Marco
Thor, Göran
Thüs, Holger
Tibell, Leif
Tibell, Sanja
Timdal, Einar
Tkalčec, Zdenko
Tønsberg, Tor
Trichies, Gérard
Triebel, Dagmar
Tsurykau, Andrei
Tulloss, Rodham E.
Tuovinen, Veera
Ulloa Sosa, Miguel
Urcelay, Carlos
Valade, François
Valenzuela Garza, Ricardo
van den Boom, Pieter
Van Vooren, Nicolas
Vasco-Palacios, Aida M.
Vauras, Jukka
Velasco Santos, Juan Manuel
Vellinga, Else
Verbeken, Annemieke
Vetlesen, Per
Vizzini, Alfredo
Voglmayr, Hermann
Volobuev, Sergey
von Brackel, Wolfgang
Voronina, Elena
Walther, Grit
Watling, Roy
Weber, Evi
Wedin, Mats
Weholt, Øyvind
Westberg, Martin
Yurchenko, Eugene
Zehnálek, Petr
Zhang, Huang
Zhurbenko, Mikhail P.
Ekman, Stefan
Zamora, Juan Carlos
Svensson, Måns
Kirschner, Roland
Olariaga, Ibai
Ryman, Svengunnar
Parra, Luis Alberto
Geml, József
Rosling, Anna
Adamčík, Slavomír
Ahti, Teuvo
Aime, M. Catherine
Ainsworth, A. Martyn
Albert, László
Albertó, Edgardo
Altés García, Alberto
Ageev, Dmitry
Agerer, Reinhard
Aguirre-Hudson, Begoña
Ammirati, Joe
Andersson, Harry
Angelini, Claudio
Antonín, Vladimír
Aoki, Takayuki
Aptroot, André
Argaud, Didier
Arguello Sosa, Blanca Imelda
Aronsen, Arne
Arup, Ulf
Asgari, Bita
Assyov, Boris
Atienza, Violeta
Bandini, Ditte
Baptista-Ferreira, João Luís
Baral, Hans-Otto
Baroni, Tim
Barreto, Robert Weingart
Beker, Henry
Bell, Ann
Bellanger, Jean-Michel
Bellù, Francesco
Bemmann, Martin
Bendiksby, Mika
Bendiksen, Egil
Bendiksen, Katriina
Benedek, Lajos
Bérešová-Guttová, Anna
Berger, Franz
Berndt, Reinhard
Bernicchia, Annarosa
Biketova, Alona Yu.
Bizio, Enrico
Bjork, Curtis
Boekhout, Teun
Boertmann, David
Böhning, Tanja
Boittin, Florent
Boluda, Carlos G.
Boomsluiter, Menno W.
Borovička, Jan
Brandrud, Tor Erik
Braun, Uwe
Brodo, Irwin
Bulyonkova, Tatiana
Burdsall, Harold H.
Buyck, Bart
Burgaz Moreno, Ana Rosa
Calatayud, Vicent
Callac, Philippe
Campo, Emanuele
Candusso, Massimo
Capoen, Brigitte
Carbó, Joaquim
Carbone, Matteo
Castañeda-Ruiz, Rafael F.
Castellano, Michael A.
Chen, Jie
Clerc, Philippe
Consiglio, Giovanni
Corriol, Gilles
Courtecuisse, Régis
Crespo De Las Casas, Ana María
Cripps, Cathy
Crous, Pedro W.
da Silva, Gladstone Alves
da Silva, Meiriele
Dam, Marjo
Dam, Nico
Dämmrich, Frank
Das, Kanad
Davies, Linda
De Crop, Eske
De Kesel, Andre
De Lange, Ruben
De Madrignac BonziBárbara, Bárbara
de la Cruz, Thomas Edison E.
Delgat, Lynn
Demoulin, Vincent
Desjardin, Dennis E.
Diederich, Paul
Dima, Bálint
Dios, Maria Martha
Douanla-Meli, Clovis
Douglas, Brian
Drechsler-Santos, Elisandro Ricardo
Dulare Devi, Pradeep Divakar
Dyer, Paul S.
Eberhardt, Ursula
Ertz, Damien
Esteve-Raventós, Fernando
Etayo Salazar, Javier Angel
Evenson, Vera
Eyssartier, Guillaume
Farkas, Edit
Favre, Alain
Fedosova, Anna G.
Filippa, Mario
Finy, Péter
Flakus, Adam
Fos, Simón
Fournier, Jacques
Fraiture, André
Franchi, Paolo
Franco Molano, Ana Esperanza
Friebes, Gernot
Frisch, Andreas
Fryday, Alan
Furci, Giuliana
Galán Márquez, Ricardo
Garbelotto, Matteo
García-Martín, Joaquina María
García Otálora, Mónica A.
García Sánchez, Dania
Gardiennet, Alain
Garnica, Sigisfredo
Garrido Benavent, Isaac
Gates, Genevieve
Lima da Gerlach, Alice Cruz
Ghobad-Nejhad, Masoomeh
Gibertoni, Tatiana B.
Grebenc, Tine
Greilhuber, Irmgard
Grishkan, Bella
Groenewald, Johannes Z.
Grube, Martin
Gruhn, Gérald
Gueidan, Cécile
Gulden, Gro
Gusmão, Luis F. P.
Hafellner, Josef
Hairaud, Michel
Halama, Marek
Hallenberg, Nils
Halling, Roy E.
Hansen, Karen
Harder, Christoffer Bugge
Heilmann-Clausen, Jacob
Helleman, Stip
Henriot, Alain
Hernandez-Restrepo, Margarita
Herve, Raphaël
Hobart, Caroline
Hoffmeister, Mascha
Høiland, Klaus
Holec, Jan
Holien, Håkon
Hughes, Karen
Hubka, Vit
Huhtinen, Seppo
Ivančević, Boris
Jagers, Marian
Jaklitsch, Walter
Jansen, Anna Elise
Jayawardena, Ruvishika S.
Jiménez Rico, Víctor
Jeppesen, Thomas Stjernegaard
Jeppson, Mikael
Johnston, Peter
Jørgensen, Per Magnus
Kärnefelt, Ingvar
Kalinina, Liudmila B.
Kantvilas, Gintaras
Karadelev, Mitko
Kasuya, Taiga
Kautmanová, Ivona
Kerrigan, Richard W.
Kirchmair, Martin
Kiyashko, Anna
Knapp, Dániel G.
Knudsen, Henning
Knudsen, Kerry
Knutsson, Tommy
Kolařík, Miroslav
Kõljalg, Urmas
Košuthová, Alica
Koszka, Attila
Kotiranta, Heikki
Kotkova, Vera
Koukol, Ondřej
Kout, Jiří
Kovács, Gábor M.
Kříž, Martin
Kruys, Åsa
Kučera, Viktor
Kudzma, Linas
Kuhar, Francisco
Kukwa, Martin
Kumar, T. K. Arun
Kunca, Vladimír
Kušan, Ivana
Kuyper, Thomas W.
Lado, Carlos
Læssøe, Thomas
Lainé, Patrice
Langer, Ewald
Larsson, Ellen
Larsson, Karl-Henrik
Laursen, Gary
Lechat, Christian
Lee, Serena
Lendemer, James C.
Levin, Laura
Lindemann, Uwe
Lindström, Håkan
Liu, Xingzhong
Llarena Hernandez, Regulo Carlos
Llop, Esteve
Locsmándi, Csaba
Lodge, Deborah Jean
Loizides, Michael
Lőkös, László
Luangsa-ard, Jennifer
Lüderitz, Matthias
Lumbsch, Thorsten
Lutz, Matthias
Mahoney, Dan
Malysheva, Ekaterina
Malysheva, Vera
Manimohan, Patinjareveettil
Marin-Felix, Yasmina
Marques, Guilhermina
Martínez-Gil, Rubén
Marson, Guy
Mata, Gerardo
Matheny, P. Brandon
Mathiassen, Geir Harald
Matočec, Neven
Mayrhofer, Helmut
Mehrabi, Mehdi
Melo, Ireneia
Mešić, Armin
Methven, Andrew S.
Miettinen, Otto
Millanes Romero, Ana M.
Miller, Andrew N.
Mitchell, James K.
Moberg, Roland
Moreau, Pierre-Arthur
Moreno, Gabriel
Morozova, Olga
Morte, Asunción
Muggia, Lucia
Muñoz González, Guillermo
Myllys, Leena
Nagy, István
Nagy, László G.
Neves, Maria Alice
Niemelä, Tuomo
Nimis, Pier Luigi
Niveiro, Nicolas
Noordeloos, Machiel E.
Nordin, Anders
Noumeur, Sara Raouia
Novozhilov, Yuri
Nuytinck, Jorinde
Ohenoja, Esteri
Oliveira Fiuza, Patricia
Orange, Alan
Ordynets, Alexander
Ortiz-Santana, Beatriz
Pacheco, Leticia
Pál-Fám, Ferenc
Palacio, Melissa
Palice, Zdeněk
Papp, Viktor
Pärtel, Kadri
Pawlowska, Julia
Paz, Aurelia
Peintner, Ursula
Pennycook, Shaun
Liparini Pereira, Olinto
Pérez Daniëls, Pablo
Pérez-De-Gregorio Capella, Miquel À.
Pérez del Amo, Carlos Manuel
Pérez Gorjón, Sergio
Pérez-Ortega, Sergio
Pérez-Vargas, Israel
Perry, Brian A.
Petersen, Jens H.
Petersen, Ronald H.
Pfister, Donald H.
Phukhamsakda, Chayanard
Piątek, Marcin
Piepenbring, Meike
Pino Bodas, Raquel
Pinzón Esquivel, Juan Pablo
Pirot, Paul
Popov, Eugene S.
Popoff, Orlando
Prieto Álvaro, María
Printzen, Christian
Psurtseva, Nadezhda
Purahong, Witoon
Quijada, Luis
Rambold, Gerhard
Ramírez, Natalia A.
Raja, Huzefa
Raspé, Olivier
Raymundo, Tania
Réblová, Martina
Rebriev, Yury A.
Reyes García, Juan de Dios
Ribes Ripoll, Miguel Ángel
Richard, Franck
Richardson, Mike J.
Robledo, Gerardo Lucio
Rodrigues Barbosa, Flavia
Rodriguez-Caycedo, Cristina
Rodriguez-Flakus, Pamela
Ronikier, Anna
Rubio Casas, Luis
Rusevska, Katerina
Saar, Günter
Saar, Irja
Salcedo, Isabel
Salcedo Martínez, Sergio M.
Salvador Montoya, Carlos A.
Sánchez-Ramírez, Santiago
Sandoval-Sierra, J. Vladimir
Santamaria, Sergi
Santana Monteiro, Josiane
Schroers, Hans Josef
Schulz, Barbara
Schmidt-Stohn, Geert
Schumacher, Trond
Senn-Irlet, Beatrice
Ševčíková, Hana
Shchepin, Oleg
Shirouzu, Takashi
Shiryaev, Anton
Siepe, Klaus
Sir, Esteban B.
Sohrabi, Mohammad
Soop, Karl
Spirin, Viacheslav
Spribille, Toby
Stadler, Marc
Stalpers, Joost
Stenroos, Soili
Suija, Ave
Sunhede, Stellan
Svantesson, Sten
Svensson, Sigvard
Svetasheva, Tatyana Yu.
Świerkosz, Krzysztof
Tamm, Heidi
Taskin, Hatira
Taudière, Adrien
Tedebrand, Jan-Olof
Tena Lahoz, Raúl
Temina, Marina
Thell, Arne
Thines, Marco
Thor, Göran
Thüs, Holger
Tibell, Leif
Tibell, Sanja
Timdal, Einar
Tkalčec, Zdenko
Tønsberg, Tor
Trichies, Gérard
Triebel, Dagmar
Tsurykau, Andrei
Tulloss, Rodham E.
Tuovinen, Veera
Ulloa Sosa, Miguel
Urcelay, Carlos
Valade, François
Valenzuela Garza, Ricardo
van den Boom, Pieter
Van Vooren, Nicolas
Vasco-Palacios, Aida M.
Vauras, Jukka
Velasco Santos, Juan Manuel
Vellinga, Else
Verbeken, Annemieke
Vetlesen, Per
Vizzini, Alfredo
Voglmayr, Hermann
Volobuev, Sergey
von Brackel, Wolfgang
Voronina, Elena
Walther, Grit
Watling, Roy
Weber, Evi
Wedin, Mats
Weholt, Øyvind
Westberg, Martin
Yurchenko, Eugene
Zehnálek, Petr
Zhang, Huang
Zhurbenko, Mikhail P.
Ekman, Stefan
Publication Year :
2018

Abstract

Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify biological diversity) with nomenclature (an artificial agreement to name biological diversity). Two proposals to amend the International Code of Nomenclature for algae, fungi, and plants (ICN), allowing DNA sequences alone (of any region and extent) to serve as types of taxon names for voucherless fungi (mainly putative taxa from environmental DNA sequences), have been submitted to be voted on at the 11th International Mycological Congress (Puerto Rico, July 2018). We consider various genetic processes affecting the distribution of alleles among taxa and find that alleles may not consistently and uniquely represent the species within which they are contained. Should the proposals be accepted, the meaning of nomenclatural types would change in a fundamental way from physical objects as sources of data to the data themselves. Such changes are conducive to irreproducible science, the potential typification on artefactual data, and massive creation of names with low information content, ultimately causing nomenclatural instability and unnecessary work for future researchers that would stall future explorations of fungal diversity. We conclude that the acceptance of DNA sequences alone as types of names of taxa, under the terms used in the current proposals, is unnecessary and would not solve the problem of naming putative taxa known only from DNA sequences in a scientifically defensible way. As an alternative, we highlight the use of formulas for naming putative taxa (candidate taxa) that do not require any modification of the ICN.<br />Depto. de Farmacología, Farmacognosia y Botánica<br />Fac. de Farmacia<br />TRUE<br />pub

Details

Database :
OAIster
Notes :
application/pdf, 2210-6359, English
Publication Type :
Electronic Resource
Accession number :
edsoai.on1457228976
Document Type :
Electronic Resource