397 results
Search Results
2. ChromaFold predicts the 3D contact map from single-cell chromatin accessibility.
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Gao, Vianne R., Yang, Rui, Das, Arnav, Luo, Renhe, Luo, Hanzhi, McNally, Dylan R., Karagiannidis, Ioannis, Rivas, Martin A., Wang, Zhong-Min, Barisic, Darko, Karbalayghareh, Alireza, Wong, Wilfred, Zhan, Yingqian A., Chin, Christopher R., Noble, William S., Bilmes, Jeff A., Apostolou, Effie, Kharas, Michael G., Béguelin, Wendy, and Viny, Aaron D.
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GENETIC regulation ,CHROMATIN ,PREDICTION models ,GENOMICS ,MICE - Abstract
Identifying cell-type-specific 3D chromatin interactions between regulatory elements can help decipher gene regulation and interpret disease-associated non-coding variants. However, achieving this resolution with current 3D genomics technologies is often infeasible given limited input cell numbers. We therefore present ChromaFold, a deep learning model that predicts 3D contact maps, including regulatory interactions, from single-cell ATAC sequencing (scATAC-seq) data alone. ChromaFold uses pseudobulk chromatin accessibility, co-accessibility across metacells, and a CTCF motif track as inputs and employs a lightweight architecture to train on standard GPUs. Trained on paired scATAC-seq and Hi-C data in human samples, ChromaFold accurately predicts the 3D contact map and peak-level interactions across diverse human and mouse test cell types. Compared to leading contact map prediction models that use ATAC-seq and CTCF ChIP-seq, ChromaFold achieves state-of-the-art performance using only scATAC-seq. Finally, fine-tuning ChromaFold on paired scATAC-seq and Hi-C in a complex tissue enables deconvolution of chromatin interactions across cell subpopulations. Obtaining a high-resolution contact map using current 3D genomics technologies can be challenging with small input cell numbers. Here, the authors develop ChromaFold, a deep learning model that predicts cell-type-specific 3D contact maps from single-cell chromatin accessibility data alone. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Temporal dynamics of nucleus accumbens neurons in male mice during reward seeking.
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Schall, Terra A., Li, King-Lun, Qi, Xiguang, Lee, Brian T., Wright, William J., Alpaugh, Erin E., Zhao, Rachel J., Liu, Jianwei, Li, Qize, Zeng, Bo, Wang, Lirong, Huang, Yanhua H., Schlüter, Oliver M., Nestler, Eric J., Nieh, Edward H., and Dong, Yan
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REWARD (Psychology) ,DOPAMINE receptors ,NEURONS ,SUCROSE ,MICE - Abstract
The nucleus accumbens (NAc) regulates reward-motivated behavior, but the temporal dynamics of NAc neurons that enable "free-willed" animals to obtain rewards remain elusive. Here, we recorded Ca
2+ activity from individual NAc neurons when mice performed self-paced lever-presses for sucrose. NAc neurons exhibited three temporally-sequenced clusters, defined by times at which they exhibited increased Ca2+ activity: approximately 0, −2.5 or −5 sec relative to the lever-pressing. Dopamine D1 receptor (D1)-expressing neurons and D2-neurons formed the majority of the −5-sec versus −2.5-sec clusters, respectively, while both neuronal subtypes were represented in the 0-sec cluster. We found that pre-press activity patterns of D1- or D2-neurons could predict subsequent lever-presses. Inhibiting D1-neurons at −5 sec or D2-neurons at −2.5 sec, but not at other timepoints, reduced sucrose-motivated lever-pressing. We propose that the time-specific activity of D1- and D2-neurons mediate key temporal features of the NAc through which reward motivation initiates reward-seeking behavior. Volitional reward taking emerges through a sequence of preluding events. Yet, the underlying neural mechanism is not fully understood. Here authors show a series of temporal dynamics of nucleus accumbens neurons that may substantiate such preluding events to commit "free-willed" animals to reward taking. [ABSTRACT FROM AUTHOR]- Published
- 2024
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4. Emerging many-to-one weighted mapping in hippocampus-amygdala network underlies memory formation.
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Liu, Jun, Hall, Arron F., and Wang, Dong V.
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MACHINE learning ,NEURONS ,EVERYDAY life ,MEMORY ,MICE - Abstract
Memories are crucial for daily life, yet the network-level organizing principles governing neural representations of experiences remain unknown. Employing dual-site in vivo recording in freely behaving male mice, here we show that hippocampal dorsal CA1 (dCA1) and basolateral amygdala (BLA) utilize distinct coding strategies for novel experiences. A small assembly of BLA neurons emerged active during memory acquisition and persisted through consolidation, whereas most dCA1 neurons were engaged in both processes. Machine learning decoding revealed that dCA1 population spikes predicted BLA assembly firing rate, suggesting that most dCA1 neurons concurrently index an episodic event by rapidly establishing weighted communication with a specific BLA assembly – a process we term "many-to-one weighted mapping." We also found that dCA1 reactivations preceded BLA assembly activity preferably during elongated and enlarged dCA1 ripples. Using a closed-loop strategy, we demonstrated that suppressing BLA activity after large dCA1 ripples impaired memory. These findings highlight a many-to-one weighted mapping mechanism underlying both the acquisition and consolidation of new memories. Memories are crucial for daily life, yet the network-level principles governing neural representations of memories are not fully understood. Here authors show that the hippocampus and its associated neural network utilize a many-to-one weighted mapping principle to rapidly encode and store new memories. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Capture of RNA-binding proteins across mouse tissues using HARD-AP.
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Ren, Yijia, Liao, Hongyu, Yan, Jun, Lu, Hongyu, Mao, Xiaowei, Wang, Chuan, Li, Yi-fei, Liu, Yu, Chen, Chong, Chen, Lu, Wang, Xiangfeng, Zhou, Kai-Yu, Liu, Han-Min, Liu, Yi, Hua, Yi-Min, Yu, Lin, and Xue, Zhihong
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RNA-binding proteins ,RNA-protein interactions ,GENE expression ,RNA ,MICE - Abstract
RNA-binding proteins (RBPs) modulate all aspects of RNA metabolism, but a comprehensive picture of RBP expression across tissues is lacking. Here, we describe our development of the method we call HARD-AP that robustly retrieves RBPs and tightly associated RNA regulatory complexes from cultured cells and fresh tissues. We successfully use HARD-AP to establish a comprehensive atlas of RBPs across mouse primary organs. We then systematically map RNA-binding sites of these RBPs using machine learning-based modeling. Notably, the modeling reveals that the LIM domain as an RNA-binding domain in many RBPs. We validate the LIM-domain-only protein Csrp1 as a tissue-dependent RNA binding protein. Taken together, HARD-AP is a powerful approach that can be used to identify RBPomes from any type of sample, allowing comprehensive and physiologically relevant networks of RNA-protein interactions. RNA-binding proteins (RBPs) modulate all aspects of RNA metabolism. Here the authors introduce a method named HARD-AP that effectively isolates RBPs and their closely associated RNA regulatory complexes from both cultured cells and fresh tissues. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Convergent direct and indirect cortical streams shape avoidance decisions in mice via the midline thalamus.
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Ma, Jun, O'Malley, John J., Kreiker, Malaz, Leng, Yan, Khan, Isbah, Kindel, Morgan, and Penzo, Mario A.
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THALAMUS ,UNCERTAIN systems ,MICE ,THALAMIC nuclei ,SIGNALS & signaling - Abstract
Current concepts of corticothalamic organization in the mammalian brain are mainly based on sensory systems, with less focus on circuits for higher-order cognitive functions. In sensory systems, first-order thalamic relays are driven by subcortical inputs and modulated by cortical feedback, while higher-order relays receive strong excitatory cortical inputs. The applicability of these principles beyond sensory systems is uncertain. We investigated mouse prefronto-thalamic projections to the midline thalamus, revealing distinct top-down control. Unlike sensory systems, this pathway relies on indirect modulation via the thalamic reticular nucleus (TRN). Specifically, the prelimbic area, which influences emotional and motivated behaviors, impacts instrumental avoidance responses through direct and indirect projections to the paraventricular thalamus. Both pathways promote defensive states, but the indirect pathway via the TRN is essential for organizing avoidance decisions through disinhibition. Our findings highlight intra-thalamic circuit dynamics that integrate cortical cognitive signals and their role in shaping complex behaviors. How prefronto-thalamic circuits shape emotional and motivated behaviors are not fully understood. Here authors report a top-down modulation in mouse prefronto-thalamic projections. The prelimbic area influences avoidance via direct and indirect pathways, revealing distinctive intrathalamic dynamics essential for complex behavior integration. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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7. Flexible neural population dynamics govern the speed and stability of sensory encoding in mouse visual cortex.
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Horrocks, Edward A. B., Rodrigues, Fabio R., and Saleem, Aman B.
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POPULATION dynamics ,VISUAL perception ,FACTOR analysis ,SENSORIMOTOR integration ,MICE ,VISUAL cortex - Abstract
Time courses of neural responses underlie real-time sensory processing and perception. How these temporal dynamics change may be fundamental to how sensory systems adapt to different perceptual demands. By simultaneously recording from hundreds of neurons in mouse primary visual cortex, we examined neural population responses to visual stimuli at sub-second timescales, during different behavioural states. We discovered that during active behavioural states characterised by locomotion, single-neurons shift from transient to sustained response modes, facilitating rapid emergence of visual stimulus tuning. Differences in single-neuron response dynamics were associated with changes in temporal dynamics of neural correlations, including faster stabilisation of stimulus-evoked changes in the structure of correlations during locomotion. Using Factor Analysis, we examined temporal dynamics of latent population responses and discovered that trajectories of population activity make more direct transitions between baseline and stimulus-encoding neural states during locomotion. This could be partly explained by dampening of oscillatory dynamics present during stationary behavioural states. Functionally, changes in temporal response dynamics collectively enabled faster, more stable and more efficient encoding of new visual information during locomotion. These findings reveal a principle of how sensory systems adapt to perceptual demands, where flexible neural population dynamics govern the speed and stability of sensory encoding. Sensory systems must adapt to changing perceptual demands. Here, the authors show that changes in sub-second timescale neural population dynamics enable flexible sensory encoding during different behavioural states, in mouse visual cortex. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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8. Oxytocin induces the formation of distinctive cortical representations and cognitions biased toward familiar mice.
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Wolf, David, Hartig, Renée, Zhuo, Yi, Scheller, Max F., Articus, Mirko, Moor, Marcel, Grinevich, Valery, Linster, Christiane, Russo, Eleonora, Weber-Fahr, Wolfgang, Reinwald, Jonathan R., and Kelsch, Wolfgang
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MICE ,RECOGNITION (Psychology) ,BODY odor ,OXYTOCIN ,OLFACTORY cortex ,COGNITION - Abstract
Social recognition is essential for the formation of social structures. Many times, recognition comes with lesser exploration of familiar animals. This lesser exploration has led to the assumption that recognition may be a habituation memory. The underlying memory mechanisms and the thereby acquired cortical representations of familiar mice have remained largely unknown, however. Here, we introduce an approach directly examining the recognition process from volatile body odors among male mice. We show that volatile body odors emitted by mice are sufficient to identify individuals and that more salience is assigned to familiar mice. Familiarity is encoded by reinforced population responses in two olfactory cortex hubs and communicated to other brain regions. The underlying oxytocin-induced plasticity promotes the separation of the cortical representations of familiar from other mice. In summary, neuronal encoding of familiar animals is distinct and utilizes the cortical representational space more broadly, promoting storage of complex social relationships. Recognition memory for other individuals forms quickly. Here the authors show that such memories are enabled by oxytocin and can be retrieved from reinforced and more distinct neural representations even when only limited sensory information is available. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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9. SANTO: a coarse-to-fine alignment and stitching method for spatial omics.
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Li, Haoyang, Lin, Yingxin, He, Wenjia, Han, Wenkai, Xu, Xiaopeng, Xu, Chencheng, Gao, Elva, Zhao, Hongyu, and Gao, Xin
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TUMOR microenvironment ,BREAST cancer ,TRANSCRIPTOMES ,EMBRYOS ,MICE - Abstract
With the flourishing of spatial omics technologies, alignment and stitching of slices becomes indispensable to decipher a holistic view of 3D molecular profile. However, existing alignment and stitching methods are unpractical to process large-scale and image-based spatial omics dataset due to extreme time consumption and unsatisfactory accuracy. Here we propose SANTO, a coarse-to-fine method targeting alignment and stitching tasks for spatial omics. SANTO firstly rapidly supplies reasonable spatial positions of two slices and identifies the overlap region. Then, SANTO refines the positions of two slices by considering spatial and omics patterns. Comprehensive experiments demonstrate the superior performance of SANTO over existing methods. Specifically, SANTO stitches cross-platform slices for breast cancer samples, enabling integration of complementary features to synergistically explore tumor microenvironment. SANTO is then applied to 3D-to-3D spatiotemporal alignment to study development of mouse embryo. Furthermore, SANTO enables cross-modality alignment of spatial transcriptomic and epigenomic data to understand complementary interactions. Spatial omics technologies require alignment and stitching of slices for a 3D molecular profile. Here, the authors present SANTO, a coarse-to-fine method that rapidly determines spatial positions and overlap regions, then refines them, enabling integration across platforms and modalities. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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10. Shifts in attention drive context-dependent subspace encoding in anterior cingulate cortex in mice during decision making.
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Hajnal, Márton Albert, Tran, Duy, Szabó, Zsombor, Albert, Andrea, Safaryan, Karen, Einstein, Michael, Vallejo Martelo, Mauricio, Polack, Pierre-Olivier, Golshani, Peyman, and Orbán, Gergő
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ARTIFICIAL neural networks ,RECURRENT neural networks ,DECISION making ,CINGULATE cortex ,MICE ,ATTENTION - Abstract
Attention supports decision making by selecting the features that are relevant for decisions. Selective enhancement of the relevant features and inhibition of distractors has been proposed as potential neural mechanisms driving this selection process. Yet, how attention operates when relevance cannot be directly determined, and the attention signal needs to be internally constructed is less understood. Here we recorded from populations of neurons in the anterior cingulate cortex (ACC) of mice in an attention-shifting task where relevance of stimulus modalities changed across blocks of trials. In contrast with V1 recordings, decoding of the irrelevant modality gradually declined in ACC after an initial transient. Our analytical proof and a recurrent neural network model of the task revealed mutually inhibiting connections that produced context-gated suppression as observed in mice. Using this RNN model we predicted a correlation between contextual modulation of individual neurons and their stimulus drive, which we confirmed in ACC but not in V1. How conflicting contingencies between stimulus and outcome can be resolved by attention are not fully understood. Here authors, combining computational model and experimental approaches, show that mouse anterior cingulate cortex (ACC) effectively operates on low-dimensional neuronal subspaces to combine stimulus-related information with internal cues to drive actions under conflict. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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11. Maternal mRNA deadenylation is defective in in vitro matured mouse and human oocytes.
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Liu, Yusheng, Tao, Wenrong, Wu, Shuang, Zhang, Yiwei, Nie, Hu, Hou, Zhenzhen, Zhang, Jingye, Yang, Zhen, Chen, Zi-Jiang, Wang, Jiaqiang, Lu, Falong, and Wu, Keliang
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OVUM ,REPRODUCTIVE technology ,MESSENGER RNA ,GENETIC translation ,MICE - Abstract
Oocyte in vitro maturation is a technique in assisted reproductive technology. Thousands of genes show abnormally high expression in in vitro maturated metaphase II (MII) oocytes compared to those matured in vivo in bovines, mice, and humans. The mechanisms underlying this phenomenon are poorly understood. Here, we use poly(A) inclusive RNA isoform sequencing (PAIso-seq) for profiling the transcriptome-wide poly(A) tails in both in vivo and in vitro matured mouse and human oocytes. Our results demonstrate that the observed increase in maternal mRNA abundance is caused by impaired deadenylation in in vitro MII oocytes. Moreover, the cytoplasmic polyadenylation of dormant Btg4 and Cnot7 mRNAs, which encode key components of deadenylation machinery, is impaired in in vitro MII oocytes, contributing to reduced translation of these deadenylase machinery components and subsequently impaired global maternal mRNA deadenylation. Our findings highlight impaired maternal mRNA deadenylation as a distinct molecular defect in in vitro MII oocytes. The study reveals defective maternal mRNA deadenylation in oocytes matured in culture dishes versus natural ones, potentially explaining lower fertility in assisted reproduction with immature oocytes. [ABSTRACT FROM AUTHOR]
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- 2024
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12. Central amygdala CRF+ neurons promote heightened threat reactivity following early life adversity in mice.
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Demaestri, Camila, Pisciotta, Margaux, Altunkeser, Naira, Berry, Georgia, Hyland, Hannah, Breton, Jocelyn, Darling, Anna, Williams, Brenna, and Bath, Kevin G.
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AMYGDALOID body ,CORTICOTROPIN releasing hormone ,NEURONS ,NEURAL circuitry ,MICE ,FAILURE (Psychology) - Abstract
Failure to appropriately predict and titrate reactivity to threat is a core feature of fear and anxiety-related disorders and is common following early life adversity (ELA). A population of neurons in the lateral central amygdala (CeAL) expressing corticotropin releasing factor (CRF) have been proposed to be key in processing threat of different intensities to mediate active fear expression. Here, we use in vivo fiber photometry to show that ELA results in sex-specific changes in the activity of CeAL CRF+ neurons, yielding divergent mechanisms underlying the augmented startle in ELA mice, a translationally relevant behavior indicative of heightened threat reactivity and hypervigilance. Further, chemogenic inhibition of CeAL CRF+ neurons selectively diminishes startle and produces a long-lasting suppression of threat reactivity. These findings identify a mechanism for sex-differences in susceptibility for anxiety following ELA and have broad implications for understanding the neural circuitry that encodes and gates the behavioral expression of fear. Heightened threat reactivity following early life adversity (ELA) is linked to dysregulated Crh signaling, crucial for regulating fear expression in the CeAL. Here, the authors show sex-specific changes in CeAL CRF+ neuron activity following ELA and their role in enhancing startle. [ABSTRACT FROM AUTHOR]
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- 2024
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13. Mycobacterium tuberculosis strain with deletions in menT3 and menT4 is attenuated and confers protection in mice and guinea pigs.
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Gosain, Tannu Priya, Chugh, Saurabh, Rizvi, Zaigham Abbas, Chauhan, Neeraj Kumar, Kidwai, Saqib, Thakur, Krishan Gopal, Awasthi, Amit, and Singh, Ramandeep
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GUINEA pigs ,MYCOBACTERIUM tuberculosis ,T cells ,MICE ,IMMUNOLOGIC memory ,BACTERIAL toxins ,OXIDATIVE stress - Abstract
The genome of Mycobacterium tuberculosis encodes for a large repertoire of toxin-antitoxin systems. In the present study, MenT3 and MenT4 toxins belonging to MenAT subfamily of TA systems have been functionally characterized. We demonstrate that ectopic expression of these toxins inhibits bacterial growth and this is rescued upon co-expression of their cognate antitoxins. Here, we show that simultaneous deletion of menT3 and menT4 results in enhanced susceptibility of M. tuberculosis upon exposure to oxidative stress and attenuated growth in guinea pigs and mice. We observed reduced expression of transcripts encoding for proteins that are essential or required for intracellular growth in mid-log phase cultures of ΔmenT4ΔT3 compared to parental strain. Further, the transcript levels of proteins involved in efficient bacterial clearance were increased in lung tissues of ΔmenT4ΔT3 infected mice relative to parental strain infected mice. We show that immunization of mice and guinea pigs with ΔmenT4ΔT3 confers significant protection against M. tuberculosis infection. Remarkably, immunization of mice with ΔmenT4ΔT3 results in increased antigen-specific T
H 1 bias and activated memory T cell response. We conclude that MenT3 and MenT4 are important for M. tuberculosis pathogenicity and strains lacking menT3 and menT4 have the potential to be explored further as vaccine candidates. Gosain et al.'s work aims to enhance understanding of the contribution of MenT3 and MenT4 toxins belonging to MenAT TA systems to the physiology and pathogenesis of Mycobacterium tuberculosis. The authors show that strains lacking these proteins is attenuated and confers protection in vivo. [ABSTRACT FROM AUTHOR]- Published
- 2024
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14. Augmented microglial endoplasmic reticulum-mitochondria contacts mediate depression-like behavior in mice induced by chronic social defeat stress.
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Zhang, Jia-Rui, Shen, Shi-Yu, Zhai, Meng-Ying, Shen, Zu-Qi, Li, Wei, Liang, Ling-Feng, Yin, Shu-Yuan, Han, Qiu-Qin, Li, Bing, Zhang, Yu-Qiu, and Yu, Jin
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SOCIAL defeat ,ENDOPLASMIC reticulum ,MICROGLIA ,ANIMAL social behavior ,MITOCHONDRIAL membranes ,MICE ,HOMEOSTASIS - Abstract
Extracellular ATP (eATP) signaling through the P2X7 receptor pathway is widely believed to trigger NLRP3 inflammasome assembly in microglia, potentially contributing to depression. However, the cellular stress responses of microglia to both eATP and stress itself remain largely unexplored. Mitochondria-associated membranes (MAMs) is a platform facilitating calcium transport between the endoplasmic reticulum (ER) and mitochondria, regulating ER stress responses and mitochondrial homeostasis. This study aims to investigate how MAMs influence microglial reaction and their involvement in the development of depression-like symptoms in response to chronic social defeat stress (CSDS). CSDS induced ER stress, MAMs' modifications, mitochondrial damage, and the formation of the IP3R3-GRP75-VDAC1 complex at the ER-mitochondria interface in hippocampal microglia, all concomitant with depression-like behaviors. Additionally, exposing microglia to eATP to mimic CSDS conditions resulted in analogous outcomes. Furthermore, knocking down GRP75 in BV2 cells impeded ER-mitochondria contact, calcium transfer, ER stress, mitochondrial damage, mitochondrial superoxide production, and NLRP3 inflammasome aggregation induced by eATP. In addition, reduced GRP75 expression in microglia of Cx3cr1
CreER/+ Hspa9f/+ mice lead to reduce depressive behaviors, decreased NLRP3 inflammasome aggregation, and fewer ER-mitochondria contacts in hippocampal microglia during CSDS. Here, we show the role of MAMs, particularly the formation of a tripartite complex involving IP3R3, GRP75, and VDAC1 within MAMs, in facilitating communication between the ER and mitochondria in microglia, thereby contributing to the development of depression-like phenotypes in male mice. Malfunctioning of cellular organelles, such as the endoplasmic reticulum (ER) and mitochondria, can have a role in stress-induced pathophysiological changes. Here, the authors show that increased mitochondria‐associated endoplasmic reticulum membranes contacts related to ATP-P2X7 receptor signaling contribute to stress responses in microglia and the development of depression-like behavior in male mice. [ABSTRACT FROM AUTHOR]- Published
- 2024
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15. Protein restriction slows the development and progression of pathology in a mouse model of Alzheimer's disease.
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Babygirija, Reji, Sonsalla, Michelle M., Mill, Jericha, James, Isabella, Han, Jessica H., Green, Cara L., Calubag, Mariah F., Wade, Gina, Tobon, Anna, Michael, John, Trautman, Michaela M., Matoska, Ryan, Yeh, Chung-Yang, Grunow, Isaac, Pak, Heidi H., Rigby, Michael J., Baldwin, Dominique A., Niemi, Natalie M., Denu, John M., and Puglielli, Luigi
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ALZHEIMER'S disease ,LOW-protein diet ,MICE ,LABORATORY mice ,ANIMAL disease models ,GLYCEMIC control ,NEUROFIBRILLARY tangles - Abstract
Dietary protein is a critical regulator of metabolic health and aging. Low protein diets are associated with healthy aging in humans, and dietary protein restriction extends the lifespan and healthspan of mice. In this study, we examined the effect of protein restriction (PR) on metabolic health and the development and progression of Alzheimer's disease (AD) in the 3xTg mouse model of AD. Here, we show that PR promotes leanness and glycemic control in 3xTg mice, specifically rescuing the glucose intolerance of 3xTg females. PR induces sex-specific alterations in circulating and brain metabolites, downregulating sphingolipid subclasses in 3xTg females. PR also reduces AD pathology and mTORC1 activity, increases autophagy, and improves the cognition of 3xTg mice. Finally, PR improves the survival of 3xTg mice. Our results suggest that PR or pharmaceutical interventions that mimic the effects of this diet may hold promise as a treatment for AD. There is growing need for ways to slow or prevent Alzheimer's disease (AD). Here, the authors demonstrate that a low protein diet can protect against metabolic dysfunction, slow AD progression, and preserve cognitive function in a mouse model of AD. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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16. Midbrain glutamatergic circuit mechanism of resilience to socially transferred allodynia in male mice.
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Han, Yi, Ai, Lin, Song, Lingzhen, Zhou, Yu, Chen, Dandan, Sha, Sha, Ji, Ran, Li, Qize, Bu, Qingyang, Pan, Xiangyu, Zhai, Xiaojing, Cui, Mengqiao, Duan, Jiawen, Yang, Junxia, Chaudhury, Dipesh, Hu, Ankang, Liu, He, Han, Ming-Hu, Cao, Jun-Li, and Zhang, Hongxing
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ALLODYNIA ,MESENCEPHALON ,PSYCHOLOGICAL resilience ,MICE ,DOPAMINERGIC neurons ,NUCLEUS accumbens ,MALES - Abstract
The potential brain mechanism underlying resilience to socially transferred allodynia remains unknown. Here, we utilize a well-established socially transferred allodynia paradigm to segregate male mice into pain-susceptible and pain-resilient subgroups. Brain screening results show that ventral tegmental area glutamatergic neurons are selectively activated in pain-resilient mice as compared to control and pain-susceptible mice. Chemogenetic manipulations demonstrate that activation and inhibition of ventral tegmental area glutamatergic neurons bi-directionally regulate resilience to socially transferred allodynia. Moreover, ventral tegmental area glutamatergic neurons that project specifically to the nucleus accumbens shell and lateral habenula regulate the development and maintenance of the pain-resilient phenotype, respectively. Together, we establish an approach to explore individual variations in pain response and identify ventral tegmental area glutamatergic neurons and related downstream circuits as critical targets for resilience to socially transferred allodynia and the development of conceptually innovative analgesics. Mechanical allodynia can be socially transferred. Here, authors show that a small population of mice exhibit resilience to socially transferred allodynia, an active process mediated by ventral tegmental area glutamatergic circuits. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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17. KSHV infection of B cells primes protective T cell responses in humanized mice.
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Caduff, Nicole, Rieble, Lisa, Böni, Michelle, McHugh, Donal, Roshan, Romin, Miley, Wendell, Labo, Nazzarena, Barman, Sumanta, Trivett, Matthew, Bosma, Douwe M. T., Rühl, Julia, Goebels, Norbert, Whitby, Denise, and Münz, Christian
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T cells ,B cells ,B cell lymphoma ,CANCER cells ,KAPOSI'S sarcoma ,MICE ,B cell receptors - Abstract
Kaposi sarcoma associated herpesvirus (KSHV) is associated with around 1% of all human tumors, including the B cell malignancy primary effusion lymphoma (PEL), in which co-infection with the Epstein Barr virus (EBV) can almost always be found in malignant cells. Here, we demonstrate that KSHV/EBV co-infection of mice with reconstituted human immune systems (humanized mice) leads to IgM responses against both latent and lytic KSHV antigens, and expansion of central and effector memory CD4
+ and CD8+ T cells. Among these, KSHV/EBV dual-infection allows for the priming of CD8+ T cells that are specific for the lytic KSHV antigen K6 and able to kill KSHV/EBV infected B cells. This suggests that K6 may represent a vaccine antigen for the control of KSHV and its associated pathologies in high seroprevalence regions, such as Sub-Saharan Africa. Kaposi sarcoma associated herpesvirus (KSHV) and Epstein Barr virus often co-infect hosts and some malignancies, such as primary effusion lymphoma, are typically arising from dual-infected cells. Here authors recapitulate dual infection in a humanized mouse model, and find that under these conditions, an efficient and specific CD8+ T cell response is mounted against the lytic KSHV antigen K6. [ABSTRACT FROM AUTHOR]- Published
- 2024
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18. Memory CD8 T cells are vulnerable to chronic IFN-γ signals but not to CD4 T cell deficiency in MHCII-deficient mice.
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Setoguchi, Ruka, Sengiku, Tomoya, Kono, Hiroki, Kawakami, Eiryo, Kubo, Masato, Yamamoto, Tadashi, and Hori, Shohei
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IMMUNOLOGIC memory ,T cells ,CD4 antigen ,INTERFERON receptors ,MICE - Abstract
The mechanisms by which the number of memory CD8 T cells is stably maintained remains incompletely understood. It has been postulated that maintaining them requires help from CD4 T cells, because adoptively transferred memory CD8 T cells persist poorly in MHC class II (MHCII)-deficient mice. Here we show that chronic interferon-γ signals, not CD4 T cell-deficiency, are responsible for their attrition in MHCII-deficient environments. Excess IFN-γ is produced primarily by endogenous colonic CD8 T cells in MHCII-deficient mice. IFN-γ neutralization restores the number of memory CD8 T cells in MHCII-deficient mice, whereas repeated IFN-γ administration or transduction of a gain-of-function STAT1 mutant reduces their number in wild-type mice. CD127
high memory cells proliferate actively in response to IFN-γ signals, but are more susceptible to attrition than CD127low terminally differentiated effector memory cells. Furthermore, single-cell RNA-sequencing of memory CD8 T cells reveals proliferating cells that resemble short-lived, terminal effector cells and documents global downregulation of gene signatures of long-lived memory cells in MHCII-deficient environments. We propose that chronic IFN-γ signals deplete memory CD8 T cells by compromising their long-term survival and by diverting self-renewing CD127high cells toward terminal differentiation. Memory CD8+ T cells persist poorly in MHCII-deficient mice. Here the authors show that this CD8+ T cell attrition is not caused by a lack of CD4+ T cell help, as previously proposed, but by chronic IFN-γ signals derived from endogenous colonic CD8+ T cells. [ABSTRACT FROM AUTHOR]- Published
- 2024
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19. BIN1 knockdown rescues systolic dysfunction in aging male mouse hearts.
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Westhoff, Maartje, del Villar, Silvia G., Voelker, Taylor L., Thai, Phung N., Spooner, Heather C., Costa, Alexandre D., Sirish, Padmini, Chiamvimonvat, Nipavan, Dickson, Eamonn J., and Dixon, Rose E.
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AGING ,HEART diseases ,ADENO-associated virus ,MYOSIN ,RYANODINE receptors ,HEART ,MICE - Abstract
Cardiac dysfunction is a hallmark of aging in humans and mice. Here we report that a two-week treatment to restore youthful Bridging Integrator 1 (BIN1) levels in the hearts of 24-month-old mice rejuvenates cardiac function and substantially reverses the aging phenotype. Our data indicate that age-associated overexpression of BIN1 occurs alongside dysregulated endosomal recycling and disrupted trafficking of cardiac Ca
V 1.2 and type 2 ryanodine receptors. These deficiencies affect channel function at rest and their upregulation during acute stress. In vivo echocardiography reveals reduced systolic function in old mice. BIN1 knockdown using an adeno-associated virus serotype 9 packaged shRNA-mBIN1 restores the nanoscale distribution and clustering plasticity of ryanodine receptors and recovers Ca2+ transient amplitudes and cardiac systolic function toward youthful levels. Enhanced systolic function correlates with increased phosphorylation of the myofilament protein cardiac myosin binding protein-C. These results reveal BIN1 knockdown as a novel therapeutic strategy to rejuvenate the aging myocardium. Cardiac dysfunction is a hallmark of aging in humans and mice. Here, the authors show that by restoring youthful Bridging Integrator 1 (BIN1) protein levels in the hearts of 24-month-old mice in vivo cardiac systolic function is rejuvenated, and the aging phenotype partially reversed within two weeks. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
20. Localized and global representation of prior value, sensory evidence, and choice in male mouse cerebral cortex.
- Author
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Ishizu, Kotaro, Nishimoto, Shosuke, Ueoka, Yutaro, and Funamizu, Akihiro
- Subjects
CEREBRAL cortex ,REWARD (Psychology) ,AUDITORY cortex ,PREFRONTAL cortex ,MOTOR cortex ,MICE - Abstract
Adaptive behavior requires integrating prior knowledge of action outcomes and sensory evidence for making decisions while maintaining prior knowledge for future actions. As outcome- and sensory-based decisions are often tested separately, it is unclear how these processes are integrated in the brain. In a tone frequency discrimination task with two sound durations and asymmetric reward blocks, we found that neurons in the medial prefrontal cortex of male mice represented the additive combination of prior reward expectations and choices. The sensory inputs and choices were selectively decoded from the auditory cortex irrespective of reward priors and the secondary motor cortex, respectively, suggesting localized computations of task variables are required within single trials. In contrast, all the recorded regions represented prior values that needed to be maintained across trials. We propose localized and global computations of task variables in different time scales in the cerebral cortex. The extent to which brains employ Bayesian principles remains unclear. Here, the authors provide evidence suggesting that neurons in the medial prefrontal cortex represent the modulation of reward expectation (i.e., prior values) with incoming sensory inputs to compute confidence values. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
21. Multiplexed representation of others in the hippocampal CA1 subfield of female mice.
- Author
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Zhang, Xiang, Cao, Qichen, Gao, Kai, Chen, Cong, Cheng, Sihui, Li, Ang, Zhou, Yuqian, Liu, Ruojin, Hao, Jun, Kropff, Emilio, and Miao, Chenglin
- Subjects
HIPPOCAMPUS (Brain) ,FEMALES ,RODENTS ,MICE ,SELF ,LEARNING - Abstract
Hippocampal place cells represent the position of a rodent within an environment. In addition, recent experiments show that the CA1 subfield of a passive observer also represents the position of a conspecific performing a spatial task. However, whether this representation is allocentric, egocentric or mixed is less clear. In this study we investigated the representation of others during free behavior and in a task where female mice learned to follow a conspecific for a reward. We found that most cells represent the position of others relative to self-position (social-vector cells) rather than to the environment, with a prevalence of purely egocentric coding modulated by context and mouse identity. Learning of a pursuit task improved the tuning of social-vector cells, but their number remained invariant. Collectively, our results suggest that the hippocampus flexibly codes the position of others in multiple coordinate systems, albeit favoring the self as a reference point. How the position of conspecifics is represented in the brain is not fully understood. Here authors show that the position of conspecifics is represented relative to self-position in the hippocampus of female mice, which is modulated by context and identity and improved through learning. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
22. Distinct local and global functions of mouse Aβ low-threshold mechanoreceptors in mechanical nociception.
- Author
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Gautam, Mayank, Yamada, Akihiro, Yamada, Ayaka I., Wu, Qinxue, Kridsada, Kim, Ling, Jennifer, Yu, Huasheng, Dong, Peter, Ma, Minghong, Gu, Jianguo, and Luo, Wenqin
- Subjects
CHRONIC pain ,MICE ,HYPERALGESIA ,LABORATORY mice ,OPTOGENETICS - Abstract
The roles of Aβ low-threshold mechanoreceptors (LTMRs) in transmitting mechanical hyperalgesia and in alleviating chronic pain have been of great interest but remain contentious. Here we utilized intersectional genetic tools, optogenetics, and high-speed imaging to specifically examine functions of Split
Cre labeled mouse Aβ-LTMRs in this regard. Genetic ablation of SplitCre -Aβ-LTMRs increased mechanical nociception but not thermosensation in both acute and chronic inflammatory pain conditions, indicating a modality-specific role in gating mechanical nociception. Local optogenetic activation of SplitCre -Aβ-LTMRs triggered nociception after tissue inflammation, whereas their broad activation at the dorsal column still alleviated mechanical hypersensitivity of chronic inflammation. Taking all data into consideration, we propose a model, in which Aβ-LTMRs play distinctive local and global roles in transmitting or alleviating mechanical hyperalgesia of chronic pain, respectively. Our model suggests a strategy of global activation plus local inhibition of Aβ-LTMRs for treating mechanical hyperalgesia. The mechanism underlying mechanical hyperalgesia is not fully understood. Here authors show opposing roles of tactile afferents in mechanical nociception using mouse pain models. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
23. Combined and differential roles of ADD domains of DNMT3A and DNMT3L on DNA methylation landscapes in mouse germ cells.
- Author
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Kubo, Naoki, Uehara, Ryuji, Uemura, Shuhei, Ohishi, Hiroaki, Shirane, Kenjiro, and Sasaki, Hiroyuki
- Subjects
GERM cells ,DNA methylation ,PROTEIN domains ,OVUM ,MICE - Abstract
DNA methyltransferase 3A (DNMT3A) and its catalytically inactive cofactor DNA methyltransferase 3-Like (DNMT3L) proteins form functional heterotetramers to deposit DNA methylation in mammalian germ cells. While both proteins have an ATRX-DNMT3-DNMT3L (ADD) domain that recognizes histone H3 tail unmethylated at lysine-4 (H3K4me0), the combined and differential roles of the domains in the two proteins have not been fully defined in vivo. Here we investigate DNA methylation landscapes in female and male germ cells derived from mice with loss-of-function amino acid substitutions in the ADD domains of DNMT3A and/or DNMT3L. Mutations in either the DNMT3A-ADD or the DNMT3L-ADD domain moderately decrease global CG methylation levels, but to different degrees, in both germ cells. Furthermore, when the ADD domains of both DNMT3A and DNMT3L lose their functions, the CG methylation levels are much more reduced, especially in oocytes, comparable to the impact of the Dnmt3a/3L knockout. In contrast, aberrant accumulation of non-CG methylation occurs at thousands of genomic regions in the double mutant oocytes and spermatozoa. These results highlight the critical role of the ADD-H3K4me0 binding in proper CG and non-CG methylation in germ cells and the various impacts of the ADD domains of the two proteins. DNMT3A and DNMT3L form a complex to deposit DNA methylation in mammalian germ cells. Here, the authors report that loss-of-function of ADD domains of DNMT3A and/or DNMT3L has various impacts on DNA methylation landscapes in mouse oocytes and sperm. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
24. Distinct local and global functions of mouse Aβ low-threshold mechanoreceptors in mechanical nociception.
- Author
-
Gautam, Mayank, Yamada, Akihiro, Yamada, Ayaka I., Wu, Qinxue, Kridsada, Kim, Ling, Jennifer, Yu, Huasheng, Dong, Peter, Ma, Minghong, Gu, Jianguo, and Luo, Wenqin
- Subjects
MECHANORECEPTORS ,CHRONIC pain ,MICE ,HYPERALGESIA ,LABORATORY mice ,OPTOGENETICS - Abstract
The roles of Aβ low-threshold mechanoreceptors (LTMRs) in transmitting mechanical hyperalgesia and in alleviating chronic pain have been of great interest but remain contentious. Here we utilized intersectional genetic tools, optogenetics, and high-speed imaging to specifically examine functions of Split
Cre labeled mouse Aβ-LTMRs in this regard. Genetic ablation of SplitCre -Aβ-LTMRs increased mechanical nociception but not thermosensation in both acute and chronic inflammatory pain conditions, indicating a modality-specific role in gating mechanical nociception. Local optogenetic activation of SplitCre -Aβ-LTMRs triggered nociception after tissue inflammation, whereas their broad activation at the dorsal column still alleviated mechanical hypersensitivity of chronic inflammation. Taking all data into consideration, we propose a model, in which Aβ-LTMRs play distinctive local and global roles in transmitting or alleviating mechanical hyperalgesia of chronic pain, respectively. Our model suggests a strategy of global activation plus local inhibition of Aβ-LTMRs for treating mechanical hyperalgesia. The mechanism underlying mechanical hyperalgesia is not fully understood. Here authors show opposing roles of tactile afferents in mechanical nociception using mouse pain models. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
25. Remodeling of the postsynaptic proteome in male mice and marmosets during synapse development.
- Author
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Kaizuka, Takeshi, Suzuki, Takehiro, Kishi, Noriyuki, Tamada, Kota, Kilimann, Manfred W., Ueyama, Takehiko, Watanabe, Masahiko, Shimogori, Tomomi, Okano, Hideyuki, Dohmae, Naoshi, and Takumi, Toru
- Subjects
MARMOSETS ,CALLITHRIX jacchus ,NEUROPLASTICITY ,MICE ,NEURAL development ,PROTEOMICS ,SYNAPSES - Abstract
Postsynaptic proteins play crucial roles in synaptic function and plasticity. During brain development, alterations in synaptic number, shape, and stability occur, known as synapse maturation. However, the postsynaptic protein composition changes during development are not fully understood. Here, we show the trajectory of the postsynaptic proteome in developing male mice and common marmosets. Proteomic analysis of mice at 2, 3, 6, and 12 weeks of age shows that proteins involved in synaptogenesis are differentially expressed during this period. Analysis of published transcriptome datasets shows that the changes in postsynaptic protein composition in the mouse brain after 2 weeks of age correlate with gene expression changes. Proteomic analysis of marmosets at 0, 2, 3, 6, and 24 months of age show that the changes in the marmoset brain can be categorized into two parts: the first 2 months and after that. The changes observed in the first 2 months are similar to those in the mouse brain between 2 and 12 weeks of age. The changes observed in marmoset after 2 months old include differential expression of synaptogenesis-related molecules, which hardly overlap with that in mice. Our results provide a comprehensive proteomic resource that underlies developmental synapse maturation in rodents and primates. The proteomic changes that occur during synapse development are not fully understood. In this work, the authors characterise the postsynaptic proteome changes that occur during development in male mice and marmosets. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
26. Serotonergic modulation of vigilance states in zebrafish and mice.
- Author
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Zhao, Yang, Huang, Chun-Xiao, Gu, Yiming, Zhao, Yacong, Ren, Wenjie, Wang, Yutong, Chen, Jinjin, Guan, Na N., and Song, Jianren
- Subjects
NEURAL circuitry ,BRACHYDANIO ,AVERSIVE stimuli ,MICE ,PREFRONTAL cortex ,ANIMAL locomotion ,RAPHE nuclei - Abstract
Vigilance refers to being alertly watchful or paying sustained attention to avoid potential threats. Animals in vigilance states reduce locomotion and have an enhanced sensitivity to aversive stimuli so as to react quickly to dangers. Here we report that an unconventional 5-HT driven mechanism operating at neural circuit level which shapes the internal state underlying vigilance behavior in zebrafish and male mice. The neural signature of internal vigilance state was characterized by persistent low-frequency high-amplitude neuronal synchrony in zebrafish dorsal pallium and mice prefrontal cortex. The neuronal synchronization underlying vigilance was dependent on intense release of 5-HT induced by persistent activation of either DRN 5-HT neuron or local 5-HT axon terminals in related brain regions via activation of 5-HTR7. Thus, we identify a mechanism of vigilance behavior across species that illustrates the interplay between neuromodulators and neural circuits necessary to shape behavior states. To successfully escape a predator, animals usually maintain a vigilance state, the neural basis of which was unknown. Here, authors show a 5-HT driven mechanism operating at neural circuit level which shapes the vigilance state in zebrafish and mice. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
27. Efficient coding of natural images in the mouse visual cortex.
- Author
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Bolaños, Federico, Orlandi, Javier G., Aoki, Ryo, Jagadeesh, Akshay V., Gardner, Justin L., and Benucci, Andrea
- Subjects
VISUAL cortex ,MICE ,OPEN-ended questions - Abstract
How the activity of neurons gives rise to natural vision remains a matter of intense investigation. The mid-level visual areas along the ventral stream are selective to a common class of natural images—textures—but a circuit-level understanding of this selectivity and its link to perception remains unclear. We addressed these questions in mice, first showing that they can perceptually discriminate between textures and statistically simpler spectrally matched stimuli, and between texture types. Then, at the neural level, we found that the secondary visual area (LM) exhibited a higher degree of selectivity for textures compared to the primary visual area (V1). Furthermore, textures were represented in distinct neural activity subspaces whose relative distances were found to correlate with the statistical similarity of the images and the mice's ability to discriminate between them. Notably, these dependencies were more pronounced in LM, where the texture-related subspaces were smaller than in V1, resulting in superior stimulus decoding capabilities. Together, our results demonstrate texture vision in mice, finding a linking framework between stimulus statistics, neural representations, and perceptual sensitivity—a distinct hallmark of efficient coding computations. Whether mice can perceptually discriminate between texture images, and if so how these stimuli are processed by their visual system, remains an open question. Here, the authors show that mice can visually discriminate between textures and found evidence for 'efficient coding', highlighting a correlative link between image statistics, perceptual behavior, and geometrical aspects of neural representations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
28. Nucleocapsid protein-specific monoclonal antibodies protect mice against Crimean-Congo hemorrhagic fever virus.
- Author
-
Garrison, Aura R., Moresco, Vanessa, Zeng, Xiankun, Cline, Curtis R., Ward, Michael D., Ricks, Keersten M., Olschner, Scott P., Cazares, Lisa H., Karaaslan, Elif, Fitzpatrick, Collin J., Bergeron, Éric, Pegan, Scott D., and Golden, Joseph W.
- Subjects
MONOCLONAL antibodies ,HEMORRHAGIC fever ,VIRAL proteins ,GLYCOPROTEINS ,MICE - Abstract
Crimean-Congo hemorrhagic fever virus (CCHFV) is a WHO priority pathogen. Antibody-based medical countermeasures offer an important strategy to mitigate severe disease caused by CCHFV. Most efforts have focused on targeting the viral glycoproteins. However, glycoproteins are poorly conserved among viral strains. The CCHFV nucleocapsid protein (NP) is highly conserved between CCHFV strains. Here, we investigate the protective efficacy of a CCHFV monoclonal antibody targeting the NP. We find that an anti-NP monoclonal antibody (mAb-9D5) protected female mice against lethal CCHFV infection or resulted in a significant delay in mean time-to-death in mice that succumbed to disease compared to isotype control animals. Antibody protection is independent of Fc-receptor functionality and complement activity. The antibody bound NP from several CCHFV strains and exhibited robust cross-protection against the heterologous CCHFV strain Afg09-2990. Our work demonstrates that the NP is a viable target for antibody-based therapeutics, providing another direction for developing immunotherapeutics against CCHFV. There are limited treatment options for infection with Crimean-Congo hemorrhagic fever virus in humans. Here, the authors show that a monoclonal antibody targeting the highly conserved viral nucleocapsid protein provides protective effects in a mouse model of infection. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
29. NAAA-regulated lipid signaling in monocytes controls the induction of hyperalgesic priming in mice.
- Author
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Fotio, Yannick, Mabou Tagne, Alex, Squire, Erica, Lee, Hye-lim, Phillips, Connor M., Chang, Kayla, Ahmed, Faizy, Greenberg, Andrew S., Villalta, S. Armando, Scarfone, Vanessa M., Spadoni, Gilberto, Mor, Marco, and Piomelli, Daniele
- Subjects
HYPERALGESIA ,PEROXISOME proliferator-activated receptors ,CHRONIC pain ,MICE ,MONOCYTES ,LIPIDS ,LABORATORY mice - Abstract
Circulating monocytes participate in pain chronification but the molecular events that cause their deployment are unclear. Using a mouse model of hyperalgesic priming (HP), we show that monocytes enable progression to pain chronicity through a mechanism that requires transient activation of the hydrolase, N-acylethanolamine acid amidase (NAAA), and the consequent suppression of NAAA-regulated lipid signaling at peroxisome proliferator-activated receptor-α (PPAR-α). Inhibiting NAAA in the 72 hours following administration of a priming stimulus prevented HP. This effect was phenocopied by NAAA deletion and depended on PPAR-α recruitment. Mice lacking NAAA in CD11b
+ cells – monocytes, macrophages, and neutrophils – were resistant to HP induction. Conversely, mice overexpressing NAAA or lacking PPAR-α in the same cells were constitutively primed. Depletion of monocytes, but not resident macrophages, generated mice that were refractory to HP. The results identify NAAA-regulated signaling in monocytes as a control node in the induction of HP and, potentially, the transition to pain chronicity. Circulating monocytes contribute to the transition to pain chronicity but the molecular events that cause their deployment are still unclear. Using a mouse model of hyperalgesic priming, here the authors show that blood monocytes contribute to the emergence of chronic pain via a mechanism that requires a transient disruption of NAAA-regulated lipid signaling. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
30. Single-cell transcriptomics identifies the differentiation trajectory from inflammatory monocytes to pro-resolving macrophages in a mouse skin allergy model.
- Author
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Miyake, Kensuke, Ito, Junya, Takahashi, Kazufusa, Nakabayashi, Jun, Brombacher, Frank, Shichino, Shigeyuki, Yoshikawa, Soichiro, Miyake, Sachiko, and Karasuyama, Hajime
- Subjects
MONOCYTES ,MACROPHAGES ,TRANSCRIPTOMES ,SKIN inflammation ,MICE ,ALLERGIES - Abstract
Both monocytes and macrophages are heterogeneous populations. It was traditionally understood that Ly6C
hi classical (inflammatory) monocytes differentiate into pro-inflammatory Ly6Chi macrophages. Accumulating evidence has suggested that Ly6Chi classical monocytes can also differentiate into Ly6Clo pro-resolving macrophages under certain conditions, while their differentiation trajectory remains to be fully elucidated. The present study with scRNA-seq and flow cytometric analyses reveals that Ly6Chi PD-L2lo classical monocytes recruited to the allergic skin lesion sequentially differentiate into Ly6Clo PD-L2hi pro-resolving macrophages, via intermediate Ly6Chi PD-L2hi macrophages but not Ly6Clo non-classical monocytes, in an IL-4 receptor-dependent manner. Along the differentiation, classical monocyte-derived macrophages display anti-inflammatory signatures followed by metabolic rewiring concordant with their ability to phagocytose apoptotic neutrophils and allergens, therefore contributing to the resolution of inflammation. The failure in the generation of these pro-resolving macrophages drives the IL-1α-mediated cycle of inflammation with abscess-like accumulation of necrotic neutrophils. Thus, we clarify the stepwise differentiation trajectory from Ly6Chi classical monocytes toward Ly6Clo pro-resolving macrophages that restrain neutrophilic aggravation of skin allergic inflammation. Classical monocytes can differentiate into pro-inflammatory or pro-resolving macrophages. Here the authors characterise mouse macrophage differentiation and show that Ly6Chi classical monocytes can differentiate into Ly6Clo pro-resolving macrophages which are involved in the resolution of skin allergic inflammation. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
31. Immune signature of Chlamydia vaccine CTH522/CAF®01 translates from mouse-to-human and induces durable protection in mice.
- Author
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Olsen, Anja W., Rosenkrands, Ida, Jacobsen, Christina S., Cheeseman, Hannah M., Kristiansen, Max P., Dietrich, Jes, Shattock, Robin J., and Follmann, Frank
- Subjects
IMMUNOGLOBULINS ,T cells ,CHLAMYDIA ,MICE ,VACCINES ,VACCINE development ,VACCINE effectiveness - Abstract
The clinical development of an effective Chlamydia vaccine requires in-depth understanding of how well protective pre-clinical immune signatures translate to humans. Here, we report a comparative immunological characterization of CTH522/CAF®01 in female mice and humans. We find a range of immune signatures that translate from mouse to human, including a Th1/Th17 cytokine profile and antibody functionality. We identify vaccine-induced T cell epitopes, conserved among Chlamydia serovars, and previously found in infected individuals. Using the mouse model, we show that the common immune signature protected against ascending infection in mice, and vaccine induced antibodies could delay bacterial ascension to the oviduct, as well as development of pathology, in a T cell depleted mouse model. Finally, we demonstrate long-lasting immunity and protection of mice one year after vaccination. Based on the results obtained in the present study, we propose to further investigate CTH522/CAF®01 in a phase IIb study. Authors present a comparative immunological characterisation of Chlamydia vaccine, CTH522/CAF®01, in mice and humans. Findings suggest the mouse to be a good predictor of human immunity to the Chlamydia vaccine CTH522/CAF®01, and long-lasting protection in the mouse further supports the development of this promising vaccine candidate. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
32. Cortical astrocyte N-methyl-D-aspartate receptors influence whisker barrel activity and sensory discrimination in mice.
- Author
-
Ahmadpour, Noushin, Kantroo, Meher, Stobart, Michael J., Meza-Resillas, Jessica, Shabanipour, Shahin, Parra-Nuñez, Jesus, Salamovska, Tetiana, Muzaleva, Anna, O'Hara, Finnegan, Erickson, Dustin, Di Gaetano, Bruno, Carrion-Falgarona, Sofia, Weber, Bruno, Lamont, Alana, Lavine, Natalie E., Kauppinen, Tiina M., Jackson, Michael F., and Stobart, Jillian L.
- Subjects
WHISKERS ,SENSORY stimulation ,METHYL aspartate receptors ,NEUROPLASTICITY ,MICE ,ASTROCYTES ,SENSORIMOTOR integration - Abstract
Astrocytes express ionotropic receptors, including N-methyl-D-aspartate receptors (NMDARs). However, the contribution of NMDARs to astrocyte-neuron interactions, particularly in vivo, has not been elucidated. Here we show that a knockdown approach to selectively reduce NMDARs in mouse cortical astrocytes decreases astrocyte Ca
2+ transients evoked by sensory stimulation. Astrocyte NMDAR knockdown also impairs nearby neuronal circuits by elevating spontaneous neuron activity and limiting neuronal recruitment, synchronization, and adaptation during sensory stimulation. Furthermore, this compromises the optimal processing of sensory information since the sensory acuity of the mice is reduced during a whisker-dependent tactile discrimination task. Lastly, we rescue the effects of astrocyte NMDAR knockdown on neurons and improve the tactile acuity of the animal by supplying exogenous ATP. Overall, our findings show that astrocytes can respond to nearby neuronal activity via their NMDAR, and that these receptors are an important component for purinergic signaling that regulate astrocyte-neuron interactions and cortical sensory discrimination in vivo. The role of astrocyte NMDA receptor signaling in cortical circuits is unclear. Here, the authors show that NMDA receptors contribute to astrocyte calcium events and support neuronal processing of sensory information that maintains sensory activity in mice. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
33. Functional plasticity of glutamatergic neurons of medullary reticular nuclei after spinal cord injury in mice.
- Author
-
Lemieux, Maxime, Karimi, Narges, and Bretzner, Frederic
- Subjects
SPINAL cord injuries ,RETICULAR formation ,NEURONS ,ANIMAL locomotion ,MICE - Abstract
Spinal cord injury disrupts the descending command from the brain and causes a range of motor deficits. Here, we use optogenetic tools to investigate the functional plasticity of the glutamatergic reticulospinal drive of the medullary reticular formation after a lateral thoracic hemisection in female mice. Sites evoking stronger excitatory descending drive in intact conditions are the most impaired after injury, whereas those associated with a weaker drive are potentiated. After lesion, pro- and anti-locomotor activities (that is, initiation/acceleration versus stop/deceleration) are overall preserved. Activating the descending reticulospinal drive improves stepping ability on a flat surface of chronically impaired injured mice, and its priming enhances recovery of skilled locomotion on a horizontal ladder. This study highlights the resilience and capacity for reorganization of the glutamatergic reticulospinal command after injury, along with its suitability as a therapeutical target to promote functional recovery. Spinal cord injury disrupts the descending command from the brain necessary for locomotion. Here, the authors show the functional plasticity of glutamatergic reticulospinal neurons and how their recruitment can enhance spontaneous motor recovery. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
34. Reduced progranulin increases tau and α-synuclein inclusions and alters mouse tauopathy phenotypes via glucocerebrosidase.
- Author
-
Takahashi, Hideyuki, Bhagwagar, Sanaea, Nies, Sarah H., Ye, Hongping, Han, Xianlin, Chiasseu, Marius T., Wang, Guilin, Mackenzie, Ian R., and Strittmatter, Stephen M.
- Subjects
TAUOPATHIES ,MICE ,TAU proteins ,PROGRANULIN ,TRANSGENIC mice ,ALPHA-synuclein ,ALZHEIMER'S disease - Abstract
Comorbid proteinopathies are observed in many neurodegenerative disorders including Alzheimer's disease (AD), increase with age, and influence clinical outcomes, yet the mechanisms remain ill-defined. Here, we show that reduction of progranulin (PGRN), a lysosomal protein associated with TDP-43 proteinopathy, also increases tau inclusions, causes concomitant accumulation of α-synuclein and worsens mortality and disinhibited behaviors in tauopathy mice. The increased inclusions paradoxically protect against spatial memory deficit and hippocampal neurodegeneration. PGRN reduction in male tauopathy attenuates activity of β-glucocerebrosidase (GCase), a protein previously associated with synucleinopathy, while increasing glucosylceramide (GlcCer)-positive tau inclusions. In neuronal culture, GCase inhibition enhances tau aggregation induced by AD-tau. Furthermore, purified GlcCer directly promotes tau aggregation in vitro. Neurofibrillary tangles in human tauopathies are also GlcCer-immunoreactive. Thus, in addition to TDP-43, PGRN regulates tau- and synucleinopathies via GCase and GlcCer. A lysosomal PGRN–GCase pathway may be a common therapeutic target for age-related comorbid proteinopathies. Neurodegenerative diseases often co-accumulate several disease-associated proteins. Here, the authors show that reduction of progranulin, a protein associated with TDP-43, also increases accumulation of tau and a-synuclein via glucocerebrosidase. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
35. SEL1L-HRD1 interaction is required to form a functional HRD1 ERAD complex.
- Author
-
Lin, Liangguang Leo, Wang, Huilun Helen, Pederson, Brent, Wei, Xiaoqiong, Torres, Mauricio, Lu, You, Li, Zexin Jason, Liu, Xiaodan, Mao, Hancheng, Wang, Hui, Zhou, Linyao Elina, Zhao, Zhen, Sun, Shengyi, and Qi, Ling
- Subjects
UBIQUITIN-conjugating enzymes ,MICE ,PROTEIN stability ,CEREBELLAR ataxia ,ENDOPLASMIC reticulum ,DEVELOPMENTAL delay - Abstract
The SEL1L-HRD1 protein complex represents the most conserved branch of endoplasmic reticulum (ER)-associated degradation (ERAD). Despite recent advances in both mouse models and humans, in vivo evidence for the importance of SEL1L in the ERAD complex formation and its (patho-)physiological relevance in mammals remains limited. Here we report that SEL1L variant p.Ser658Pro (SEL1L
S658P ) is a pathogenic hypomorphic mutation, causing partial embryonic lethality, developmental delay, and early-onset cerebellar ataxia in homozygous mice carrying the bi-allelic variant. Biochemical analyses reveal that SEL1LS658P variant not only reduces the protein stability of SEL1L, but attenuates the SEL1L-HRD1 interaction, likely via electrostatic repulsion between SEL1L F668 and HRD1 Y30 residues. Proteomic screens of SEL1L and HRD1 interactomes reveal that SEL1L-HRD1 interaction is a prerequisite for the formation of a functional HRD1 ERAD complex, as SEL1L is required for the recruitment of E2 enzyme UBE2J1 as well as DERLIN to HRD1. These data not only establish the disease relevance of SEL1L-HRD1 ERAD, but also provide additional insight into the formation of a functional HRD1 ERAD complex. The importance of the SEL1L-HRD1 interaction in vivo was unclear. Here, authors reported that SEL1L-HRD1 interaction is required to form a functional HRD1 ERAD complex by recruiting the E2 enzyme UBE2J1 and DERLIN to HRD1. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
36. Reduced progranulin increases tau and α-synuclein inclusions and alters mouse tauopathy phenotypes via glucocerebrosidase.
- Author
-
Takahashi, Hideyuki, Bhagwagar, Sanaea, Nies, Sarah H., Ye, Hongping, Han, Xianlin, Chiasseu, Marius T., Wang, Guilin, Mackenzie, Ian R., and Strittmatter, Stephen M.
- Subjects
TAUOPATHIES ,MICE ,TAU proteins ,PROGRANULIN ,TRANSGENIC mice ,ALPHA-synuclein ,ALZHEIMER'S disease - Abstract
Comorbid proteinopathies are observed in many neurodegenerative disorders including Alzheimer's disease (AD), increase with age, and influence clinical outcomes, yet the mechanisms remain ill-defined. Here, we show that reduction of progranulin (PGRN), a lysosomal protein associated with TDP-43 proteinopathy, also increases tau inclusions, causes concomitant accumulation of α-synuclein and worsens mortality and disinhibited behaviors in tauopathy mice. The increased inclusions paradoxically protect against spatial memory deficit and hippocampal neurodegeneration. PGRN reduction in male tauopathy attenuates activity of β-glucocerebrosidase (GCase), a protein previously associated with synucleinopathy, while increasing glucosylceramide (GlcCer)-positive tau inclusions. In neuronal culture, GCase inhibition enhances tau aggregation induced by AD-tau. Furthermore, purified GlcCer directly promotes tau aggregation in vitro. Neurofibrillary tangles in human tauopathies are also GlcCer-immunoreactive. Thus, in addition to TDP-43, PGRN regulates tau- and synucleinopathies via GCase and GlcCer. A lysosomal PGRN–GCase pathway may be a common therapeutic target for age-related comorbid proteinopathies. Neurodegenerative diseases often co-accumulate several disease-associated proteins. Here, the authors show that reduction of progranulin, a protein associated with TDP-43, also increases accumulation of tau and a-synuclein via glucocerebrosidase. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
37. SEL1L-HRD1 interaction is required to form a functional HRD1 ERAD complex.
- Author
-
Lin, Liangguang Leo, Wang, Huilun Helen, Pederson, Brent, Wei, Xiaoqiong, Torres, Mauricio, Lu, You, Li, Zexin Jason, Liu, Xiaodan, Mao, Hancheng, Wang, Hui, Zhou, Linyao Elina, Zhao, Zhen, Sun, Shengyi, and Qi, Ling
- Subjects
UBIQUITIN-conjugating enzymes ,MICE ,PROTEIN stability ,CEREBELLAR ataxia ,ENDOPLASMIC reticulum ,DEVELOPMENTAL delay - Abstract
The SEL1L-HRD1 protein complex represents the most conserved branch of endoplasmic reticulum (ER)-associated degradation (ERAD). Despite recent advances in both mouse models and humans, in vivo evidence for the importance of SEL1L in the ERAD complex formation and its (patho-)physiological relevance in mammals remains limited. Here we report that SEL1L variant p.Ser658Pro (SEL1L
S658P ) is a pathogenic hypomorphic mutation, causing partial embryonic lethality, developmental delay, and early-onset cerebellar ataxia in homozygous mice carrying the bi-allelic variant. Biochemical analyses reveal that SEL1LS658P variant not only reduces the protein stability of SEL1L, but attenuates the SEL1L-HRD1 interaction, likely via electrostatic repulsion between SEL1L F668 and HRD1 Y30 residues. Proteomic screens of SEL1L and HRD1 interactomes reveal that SEL1L-HRD1 interaction is a prerequisite for the formation of a functional HRD1 ERAD complex, as SEL1L is required for the recruitment of E2 enzyme UBE2J1 as well as DERLIN to HRD1. These data not only establish the disease relevance of SEL1L-HRD1 ERAD, but also provide additional insight into the formation of a functional HRD1 ERAD complex. The importance of the SEL1L-HRD1 interaction in vivo was unclear. Here, authors reported that SEL1L-HRD1 interaction is required to form a functional HRD1 ERAD complex by recruiting the E2 enzyme UBE2J1 and DERLIN to HRD1. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
38. Sonic hedgehog-heat shock protein 90β axis promotes the development of nonalcoholic steatohepatitis in mice.
- Author
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Zhang, Weitao, Lu, Junfeng, Feng, Lianshun, Xue, Hanyue, Shen, Shiyang, Lai, Shuiqing, Li, PingPing, Li, Ping, Kuang, Jian, Yang, Zhiwei, and Xu, Xiaojun
- Subjects
NON-alcoholic fatty liver disease ,HEAT shock proteins ,HEDGEHOG signaling proteins ,LIPID synthesis ,PROTEIN stability ,MICE - Abstract
Sonic hedgehog (SHH) and heat shock protein 90β (HSP90β) have been implicated in nonalcoholic steatohepatitis (NASH) but their molecular mechanisms of action remain elusive. We find that HSP90β is a key SHH downstream molecule for promoting NASH process. In hepatocytes, SHH reduces HSP90β ubiquitylation through deubiquitylase USP31, thus preventing HSP90β degradation and promoting hepatic lipid synthesis. HSP90β significantly increases in NASH mouse model, leading to secretion of exosomes enriched with miR-28-5p. miR-28-5p directly targetes and decreases Rap1b levels, which in turn promotes NF-κB transcriptional activity in macrophages and stimulates the expression of inflammatory factors. Genetic deletion, pharmacological inhibition of the SHH-HSP90β axis, or delivery of miR-28-5p to macrophages in the male mice liver, impairs NASH symptomatic development. Importantly, there is a markedly higher abundance of miR-28-5p in NASH patient sera. Taken together, the SHH-HSP90β-miR-28-5p axis offers promising therapeutic targets against NASH, and serum miR-28-5p may serve as a NASH diagnostic biomarker. The mechanistic involvement of sonic hedgehog signaling in nonalcoholic steatohepatitis is not clear. Here, the authors show that sonic hedgehog protein regulates the stability of HSP90β, enabling hepatocytes to secrete exosomes containing miR-28-5-p to promote NASH development. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
39. Sonic hedgehog-heat shock protein 90β axis promotes the development of nonalcoholic steatohepatitis in mice.
- Author
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Zhang, Weitao, Lu, Junfeng, Feng, Lianshun, Xue, Hanyue, Shen, Shiyang, Lai, Shuiqing, Li, PingPing, Li, Ping, Kuang, Jian, Yang, Zhiwei, and Xu, Xiaojun
- Subjects
NON-alcoholic fatty liver disease ,HEAT shock proteins ,HEDGEHOG signaling proteins ,LIPID synthesis ,PROTEIN stability ,MICE - Abstract
Sonic hedgehog (SHH) and heat shock protein 90β (HSP90β) have been implicated in nonalcoholic steatohepatitis (NASH) but their molecular mechanisms of action remain elusive. We find that HSP90β is a key SHH downstream molecule for promoting NASH process. In hepatocytes, SHH reduces HSP90β ubiquitylation through deubiquitylase USP31, thus preventing HSP90β degradation and promoting hepatic lipid synthesis. HSP90β significantly increases in NASH mouse model, leading to secretion of exosomes enriched with miR-28-5p. miR-28-5p directly targetes and decreases Rap1b levels, which in turn promotes NF-κB transcriptional activity in macrophages and stimulates the expression of inflammatory factors. Genetic deletion, pharmacological inhibition of the SHH-HSP90β axis, or delivery of miR-28-5p to macrophages in the male mice liver, impairs NASH symptomatic development. Importantly, there is a markedly higher abundance of miR-28-5p in NASH patient sera. Taken together, the SHH-HSP90β-miR-28-5p axis offers promising therapeutic targets against NASH, and serum miR-28-5p may serve as a NASH diagnostic biomarker. The mechanistic involvement of sonic hedgehog signaling in nonalcoholic steatohepatitis is not clear. Here, the authors show that sonic hedgehog protein regulates the stability of HSP90β, enabling hepatocytes to secrete exosomes containing miR-28-5-p to promote NASH development. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
40. AAV-delivered muscone-induced transgene system for treating chronic diseases in mice via inhalation.
- Author
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Wu, Xin, Yu, Yuanhuan, Wang, Meiyan, Dai, Di, Yin, Jianli, Liu, Wenjing, Kong, Deqiang, Tang, Shasha, Meng, Meiyao, Gao, Tian, Zhang, Yuanjin, Zhou, Yang, Guan, Ningzi, Zhao, Shangang, and Ye, Haifeng
- Subjects
OLFACTORY receptors ,TRANSGENE expression ,NON-alcoholic fatty liver disease ,CHRONIC diseases ,GENE expression ,SYNTHETIC receptors ,MICE - Abstract
Gene therapies provide treatment options for many diseases, but the safe and long-term control of therapeutic transgene expression remains a primary issue for clinical applications. Here, we develop a muscone-induced transgene system packaged into adeno-associated virus (AAV) vectors (AAV
MUSE ) based on a G protein-coupled murine olfactory receptor (MOR215-1) and a synthetic cAMP-responsive promoter (PCRE ). Upon exposure to the trigger, muscone binds to MOR215-1 and activates the cAMP signaling pathway to initiate transgene expression. AAVMUSE enables remote, muscone dose- and exposure-time-dependent control of luciferase expression in the livers or lungs of mice for at least 20 weeks. Moreover, we apply this AAVMUSE to treat two chronic inflammatory diseases: nonalcoholic fatty liver disease (NAFLD) and allergic asthma, showing that inhalation of muscone—after only one injection of AAVMUSE —can achieve long-term controllable expression of therapeutic proteins (ΔhFGF21 or ΔmIL-4). Our odorant-molecule-controlled system can advance gene-based precision therapies for human diseases. Long-term control of therapeutic transgene expression is needed. Here the authors report a muscone-induced transgene system packaged into AAVs based on a G protein-coupled murine olfactory receptor and a synthetic cAMP-responsive promoter: they show dose- and exposure-time-dependent gene expression control in mice. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
41. Artesunate treats obesity in male mice and non-human primates through GDF15/GFRAL signalling axis.
- Author
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Guo, Xuanming, Asthana, Pallavi, Zhai, Lixiang, Cheng, Ka Wing, Gurung, Susma, Huang, Jiangang, Wu, Jiayan, Zhang, Yijing, Mahato, Arun Kumar, Saarma, Mart, Ustav, Mart, Kwan, Hiu Yee, Lyu, Aiping, Chan, Kui Ming, Xu, Pingyi, Bian, Zhao-Xiang, and Wong, Hoi Leong Xavier
- Subjects
MICE ,GROWTH differentiation factors ,WEIGHT loss ,OBESITY ,PRIMATES ,ARTEMISININ derivatives - Abstract
Obesity, a global health challenge, is a major risk factor for multiple life-threatening diseases, including diabetes, fatty liver, and cancer. There is an ongoing need to identify safe and tolerable therapeutics for obesity management. Herein, we show that treatment with artesunate, an artemisinin derivative approved by the FDA for the treatment of severe malaria, effectively reduces body weight and improves metabolic profiles in preclinical models of obesity, including male mice with overnutrition-induced obesity and male cynomolgus macaques with spontaneous obesity, without inducing nausea and malaise. Artesunate promotes weight loss and reduces food intake in obese mice and cynomolgus macaques by increasing circulating levels of Growth Differentiation Factor 15 (GDF15), an appetite-regulating hormone with a brainstem-restricted receptor, the GDNF family receptor α-like (GFRAL). Mechanistically, artesunate induces the expression of GDF15 in multiple organs, especially the liver, in mice through a C/EBP homologous protein (CHOP)-directed integrated stress response. Inhibition of GDF15/GFRAL signalling by genetic ablation of GFRAL or tissue-specific knockdown of GDF15 abrogates the anti-obesity effect of artesunate in mice with diet-induced obesity, suggesting that artesunate controls bodyweight and appetite in a GDF15/GFRAL signalling-dependent manner. These data highlight the therapeutic benefits of artesunate in the treatment of obesity and related comorbidities. Obesity is a global health challenge with an ongoing need for new medical treatments. Here, the authors show that artesunate, an FDA-approved treatment for severe malaria, can be repurposed for the treatment of obesity via GDF15/GFRAL signaling axis without overt side effects in mice and non-human primates. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
42. Secretin-dependent signals in the ventromedial hypothalamus regulate energy metabolism and bone homeostasis in mice.
- Author
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Zhang, Fengwei, Qiao, Wei, Wei, Ji-an, Tao, Zhengyi, Chen, Congjia, Wu, Yefeng, Lin, Minghui, Ng, Ka Man Carmen, Zhang, Li, Yeung, Kelvin Wai-Kwok, and Chow, Billy Kwok Chong
- Subjects
HYPOTHALAMUS ,ENERGY metabolism ,BONE metabolism ,HOMEOSTASIS ,MICE ,SECRETIN ,FOOD consumption - Abstract
Secretin, though originally discovered as a gut-derived hormone, is recently found to be abundantly expressed in the ventromedial hypothalamus, from which the central neural system controls satiety, energy metabolism, and bone homeostasis. However, the functional significance of secretin in the ventromedial hypothalamus remains unclear. Here we show that the loss of ventromedial hypothalamus-derived secretin leads to osteopenia in male and female mice, which is primarily induced by diminished cAMP response element-binding protein phosphorylation and upregulation in peripheral sympathetic activity. Moreover, the ventromedial hypothalamus-secretin inhibition also contributes to hyperphagia, dysregulated lipogenesis, and impaired thermogenesis, resulting in obesity in male and female mice. Conversely, overexpression of secretin in the ventromedial hypothalamus promotes bone mass accrual in mice of both sexes. Collectively, our findings identify an unappreciated secretin signaling in the central neural system for the regulation of energy and bone metabolism, which may serve as a new target for the clinical management of obesity and osteoporosis. The mechanism by which central secretin regulates metabolism is unclear. Here, the authors show that ventromedial hypothalamus-derived secretin maintains energy and bone homeostasis by controlling food intake and sympathetic nerve activity. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
43. Single-cell multiomics decodes regulatory programs for mouse secondary palate development.
- Author
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Yan, Fangfang, Suzuki, Akiko, Iwaya, Chihiro, Pei, Guangsheng, Chen, Xian, Yoshioka, Hiroki, Yu, Meifang, Simon, Lukas M., Iwata, Junichi, and Zhao, Zhongming
- Subjects
PALATE ,MULTIOMICS ,GENETIC regulation ,CLEFT palate ,MICE - Abstract
Perturbations in gene regulation during palatogenesis can lead to cleft palate, which is among the most common congenital birth defects. Here, we perform single-cell multiome sequencing and profile chromatin accessibility and gene expression simultaneously within the same cells (n = 36,154) isolated from mouse secondary palate across embryonic days (E) 12.5, E13.5, E14.0, and E14.5. We construct five trajectories representing continuous differentiation of cranial neural crest-derived multipotent cells into distinct lineages. By linking open chromatin signals to gene expression changes, we characterize the underlying lineage-determining transcription factors. In silico perturbation analysis identifies transcription factors SHOX2 and MEOX2 as important regulators of the development of the anterior and posterior palate, respectively. In conclusion, our study charts epigenetic and transcriptional dynamics in palatogenesis, serving as a valuable resource for further cleft palate research. Development of the secondary palate is a complex process. Here, the authors profile mouse palatogenesis through single-cell multiome sequencing, revealing dynamic gene regulation across embryonic days (E) 12.5, E13.5, E14.0, and E14.5. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
44. Discovery of a peripheral 5HT2A antagonist as a clinical candidate for metabolic dysfunction-associated steatohepatitis.
- Author
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Pagire, Haushabhau S., Pagire, Suvarna H., Jeong, Byung-kwan, Choi, Won-Il, Oh, Chang Joo, Lim, Chae Won, Kim, Minhee, Yoon, Jihyeon, Kim, Seong Soon, Bae, Myung Ae, Jeon, Jae-Han, Song, Sungmin, Lee, Hee Jong, Lee, Eun Young, Goughnour, Peter C., Kim, Dooseop, Lee, In-Kyu, Loomba, Rohit, Kim, Hail, and Ahn, Jin Hee
- Subjects
HEPATIC fibrosis ,FATTY liver ,MALE models ,KNOCKOUT mice ,LIVER diseases ,MICE ,HIGH-fat diet - Abstract
Metabolic Dysfunction-Associated Steatotic Liver Disease (MASLD) is currently the leading cause of chronic liver disease worldwide. Metabolic Dysfunction-Associated Steatohepatitis (MASH), an advanced form of MASLD, can progress to liver fibrosis, cirrhosis, and hepatocellular carcinoma. Based on recent findings by our team that liver 5HT
2A knockout male mice suppressed steatosis and reduced fibrosis-related gene expression, we developed a peripheral 5HT2A antagonist, compound 11c for MASH. It shows good in vitro activity, stability, and in vivo pharmacokinetics (PK) in rats and dogs. Compound 11c also shows good in vivo efficacy in a diet-induced obesity (DIO) male mice model and in a choline-deficient, L-amino acid-defined, high-fat diet (CDAHFD) male mice model, effectively improving histologic features of MASH and fibrosis. According to the tissue distribution study using [14 C]-labeled 11c, the compound was determined to be a peripheral 5HT2A antagonist. Collectively, first-in-class compound 11c shows promise as a therapeutic agent for the treatment of MASLD and MASH. Metabolic Dysfunction-Associated Steatohepatitis (MASH), an advanced form of Metabolic Dysfunction-Associated Steatotic Liver Disease (MASLD), can progress to liver fibrosis. Here, the authors develop a peripheral 5HT2A antagonist for the treatment of MASLD and MASH. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
45. Leukemia inhibitory factor suppresses hepatic de novo lipogenesis and induces cachexia in mice.
- Author
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Yang, Xue, Wang, Jianming, Chang, Chun-Yuan, Zhou, Fan, Liu, Juan, Xu, Huiting, Ibrahim, Maria, Gomez, Maria, Guo, Grace L., Liu, Hao, Zong, Wei-Xing, Wondisford, Fredric E., Su, Xiaoyang, White, Eileen, Feng, Zhaohui, and Hu, Wenwei
- Subjects
LEUKEMIA inhibitory factor ,MICE ,CACHEXIA ,KNOCKOUT mice ,LIPID synthesis ,MUSCLE mass ,LIPID metabolism - Abstract
Cancer cachexia is a systemic metabolic syndrome characterized by involuntary weight loss, and muscle and adipose tissue wasting. Mechanisms underlying cachexia remain poorly understood. Leukemia inhibitory factor (LIF), a multi-functional cytokine, has been suggested as a cachexia-inducing factor. In a transgenic mouse model with conditional LIF expression, systemic elevation of LIF induces cachexia. LIF overexpression decreases de novo lipogenesis and disrupts lipid homeostasis in the liver. Liver-specific LIF receptor knockout attenuates LIF-induced cachexia, suggesting that LIF-induced functional changes in the liver contribute to cachexia. Mechanistically, LIF overexpression activates STAT3 to downregulate PPARα, a master regulator of lipid metabolism, leading to the downregulation of a group of PPARα target genes involved in lipogenesis and decreased lipogenesis in the liver. Activating PPARα by fenofibrate, a PPARα agonist, restores lipid homeostasis in the liver and inhibits LIF-induced cachexia. These results provide valuable insights into cachexia, which may help develop strategies to treat cancer cachexia. Cancer cachexia is a systemic syndrome characterized by dramatic weight loss and decline in adipose tissue and skeletal muscle mass. Here, the authors show that overexpression of leukemia inhibitory factor (LIF), a secreted cytokine, suppresses de novo lipogenesis and induces cachexia in mice. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
46. Persistent enhancement of basolateral amygdala-dorsomedial striatum synapses causes compulsive-like behaviors in mice.
- Author
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Lee, In Bum, Lee, Eugene, Han, Na-Eun, Slavuj, Marko, Hwang, Jeong Wook, Lee, Ahrim, Sun, Taeyoung, Jeong, Yehwan, Baik, Ja-Hyun, Park, Jae-Yong, Choi, Se-Young, Kwag, Jeehyun, and Yoon, Bong-June
- Subjects
OBSESSIVE-compulsive disorder ,COMPULSIVE behavior ,MENTAL illness ,NEURAL circuitry ,MICE - Abstract
Compulsive behaviors are observed in a range of psychiatric disorders, however the neural substrates underlying the behaviors are not clearly defined. Here we show that the basolateral amygdala-dorsomedial striatum (BLA-DMS) circuit activation leads to the manifestation of compulsive-like behaviors. We revealed that the BLA neurons projecting to the DMS, mainly onto dopamine D1 receptor-expressing neurons, largely overlap with the neuronal population that responds to aversive predator stress, a widely used anxiogenic stressor. Specific optogenetic activation of the BLA-DMS circuit induced a strong anxiety response followed by compulsive grooming. Furthermore, we developed a mouse model for compulsivity displaying a wide spectrum of compulsive-like behaviors by chronically activating the BLA-DMS circuit. In these mice, persistent molecular changes at the BLA-DMS synapses observed were causally related to the compulsive-like phenotypes. Together, our study demonstrates the involvement of the BLA-DMS circuit in the emergence of enduring compulsive-like behaviors via its persistent synaptic changes. Compulsivity is associated with many psychiatric disorders including obsessive compulsive disorder. However, the neural circuits that mediate this trait are not clearly defined. Here the authors show that the amygdalostriatal circuit plays a critical role in the pathophysiology of compulsive-like behavior. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
47. Modular interneuron circuits control motion sensitivity in the mouse retina.
- Author
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Jo, Andrew, Deniz, Sercan, Cherian, Suraj, Xu, Jian, Futagi, Daiki, DeVries, Steven H., and Zhu, Yongling
- Subjects
INTERNEURONS ,RETINAL ganglion cells ,RETINA ,MICE genetics ,RESPONSE inhibition ,MICE - Abstract
Neural computations arise from highly precise connections between specific types of neurons. Retinal ganglion cells (RGCs) with similar stratification patterns are positioned to receive similar inputs but often display different response properties. In this study, we used intersectional mouse genetics to achieve single-cell type labeling and identified an object motion sensitive (OMS) AC type, COMS-AC(counter-OMS AC). Optogenetic stimulation revealed that COMS-AC makes glycinergic synapses with the OMS-insensitive HD2p-RGC, while chemogenetic inactivation showed that COMS-AC provides inhibitory control to HD2p-RGC during local motion. This local inhibition, combined with the inhibitory drive from TH2-AC during global motion, explains the OMS-insensitive feature of HD2p-RGC. In contrast, COMS-AC fails to make synapses with W3(UHD)-RGC, allowing it to exhibit OMS under the control of VGlut3-AC and TH2-AC. These findings reveal modular interneuron circuits that endow structurally similar RGC types with different responses and present a mechanism for redundancy-reduction in the retina to expand coding capacity. Interneuron circuits in the retina allow structurally similar retinal ganglion cells to show different responses. Here the authors use an intersectional genetics approach to identify an object motion sensitive amacrine cell subtype in the mouse retina. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
48. α-Synuclein aggregates amplified from patient-derived Lewy bodies recapitulate Lewy body diseases in mice.
- Author
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Uemura, Norihito, Marotta, Nicholas P., Ara, Jahan, Meymand, Emily S., Zhang, Bin, Kameda, Hiroshi, Koike, Masato, Luk, Kelvin C., Trojanowski, John Q., and Lee, Virginia M.-Y.
- Subjects
MICE ,ALPHA-synuclein ,LABORATORY mice - Abstract
Extraction of α-Synuclein (αSyn) aggregates from Lewy body disease (LBD) brains has been widely described yet templated fibrillization of LB-αSyn often fails to propagate its structural and functional properties. We recently demonstrated that aggregates amplified from LB-αSyn (ampLB) show distinct biological activities in vitro compared to human αSyn preformed fibrils (hPFF) formed de novo. Here we compare the in vivo biological activities of hPFF and ampLB regarding seeding activity, latency in inducing pathology, distribution of pathology, inclusion morphology, and cell-type preference. Injection of ampLB into mice expressing only human αSyn (male Thy1:SNCA/Snca
–/– mice) induced pathologies similar to those of LBD subjects that were distinct from those induced by hPFF-injection or developing spontaneously with aging. Importantly, αSyn aggregates in ampLB-injected Thy1:SNCA/Snca–/– mice maintained the unique biological and conformational features of original LB-αSyn. These results indicate that ampLB-injection, rather than conventional PFF-injection or αSyn overexpression, faithfully models key aspects of LBD. α-Synuclein aggregates in Lewy bodies (LBs) have not been widely used for research due to the limited availability of diseased brains. Here, the authors report a mouse model that recapitulates LB diseases using the LB amplification method. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
- View/download PDF
49. Maternal thyroid hormone receptor β activation in mice sparks brown fat thermogenesis in the offspring.
- Author
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Oelkrug, Rebecca, Harder, Lisbeth, Pedaran, Mehdi, Hoffmann, Anne, Kolms, Beke, Inderhees, Julica, Gachkar, Sogol, Resch, Julia, Johann, Kornelia, Jöhren, Olaf, Krause, Kerstin, and Mittag, Jens
- Subjects
THYROID hormone regulation ,BROWN adipose tissue ,THYROID hormone receptors ,BODY temperature regulation ,FETAL development ,MICE ,THYROID hormones - Abstract
It is well established that maternal thyroid hormones play an important role for the developing fetus; however, the consequences of maternal hyperthyroidism for the offspring remain poorly understood. Here we show in mice that maternal 3,3',5-triiodothyronine (T3) treatment during pregnancy leads to improved glucose tolerance in the adult male offspring and hyperactivity of brown adipose tissue (BAT) thermogenesis in both sexes starting early after birth. The activated BAT provides advantages upon cold exposure, reducing the strain on other thermogenic organs like muscle. This maternal BAT programming requires intact maternal thyroid hormone receptor β (TRβ) signaling, as offspring of mothers lacking this receptor display the opposite phenotype. On the molecular level, we identify distinct T3 induced alterations in maternal serum metabolites, including choline, a key metabolite for healthy pregnancy. Taken together, our results connect maternal TRβ activation to the fetal programming of a thermoregulatory phenotype in the offspring. Maternal thyroid hormone is important for fetal development. Here, the authors show that hyperthyroidism during pregnancy can program the offsprings' glucose sensitivity and response to cold via activation of maternal thyroid hormone receptor β in a sex dependent manner [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
50. Telomouse—a mouse model with human-length telomeres generated by a single amino acid change in RTEL1.
- Author
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Smoom, Riham, May, Catherine Lee, Ortiz, Vivian, Tigue, Mark, Kolev, Hannah M., Rowe, Melissa, Reizel, Yitzhak, Morgan, Ashleigh, Egyes, Nachshon, Lichtental, Dan, Skordalakes, Emmanuel, Kaestner, Klaus H., and Tzfati, Yehuda
- Subjects
TELOMERES ,LABORATORY mice ,AMINO acids ,ANIMAL disease models ,MICE ,CELLULAR aging ,CHROMOSOMES - Abstract
Telomeres, the ends of eukaryotic chromosomes, protect genome integrity and enable cell proliferation. Maintaining optimal telomere length in the germline and throughout life limits the risk of cancer and enables healthy aging. Telomeres in the house mouse, Mus musculus, are about five times longer than human telomeres, limiting the use of this common laboratory animal for studying the contribution of telomere biology to aging and cancer. We identified a key amino acid variation in the helicase RTEL1, naturally occurring in the short-telomere mouse species M. spretus. Introducing this variation into M. musculus is sufficient to reduce the telomere length set point in the germline and generate mice with human-length telomeres. While these mice are fertile and appear healthy, the regenerative capacity of their colonic epithelium is compromised. The engineered Telomouse reported here demonstrates a dominant role of RTEL1 in telomere length regulation and provides a unique model for aging and cancer. Telomeres are the protective caps of the chromosomes, which shorten with age. Smoom and colleagues developed a mouse strain with human-size telomeres. This mouse, termed Telomouse, is therefore an invaluable tool for studying human aging and cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
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