35 results on '"Ferrandon, Dominique"'
Search Results
2. Perturbation of METTL1-mediated tRNA N7- methylguanosine modification induces senescence and aging.
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Fu, Yudong, Jiang, Fan, Zhang, Xiao, Pan, Yingyi, Xu, Rui, Liang, Xiu, Wu, Xiaofen, Li, Xingqiang, Lin, Kaixuan, Shi, Ruona, Zhang, Xiaofei, Ferrandon, Dominique, Liu, Jing, Pei, Duanqing, Wang, Jie, and Wang, Tao
- Subjects
TRANSFER RNA ,RNA modification & restriction ,CELLULAR aging ,PREMATURE aging (Medicine) ,GENETIC translation ,ORGANELLE formation - Abstract
Cellular senescence is characterized by a decrease in protein synthesis, although the underlying processes are mostly unclear. Chemical modifications to transfer RNAs (tRNAs) frequently influence tRNA activity, which is crucial for translation. We describe how tRNA N7-methylguanosine (m7G46) methylation, catalyzed by METTL1-WDR4, regulates translation and influences senescence phenotypes. Mettl1/Wdr4 and m7G gradually diminish with senescence and aging. A decrease in METTL1 causes a reduction in tRNAs, especially those with the m7G modification, via the rapid tRNA degradation (RTD) pathway. The decreases cause ribosomes to stall at certain codons, impeding the translation of mRNA that is essential in pathways such as Wnt signaling and ribosome biogenesis. Furthermore, chronic ribosome stalling stimulates the ribotoxic and integrative stress responses, which induce senescence-associated secretory phenotype. Moreover, restoring eEF1A protein mitigates senescence phenotypes caused by METTL1 deficiency by reducing RTD. Our findings demonstrate that tRNA m7G modification is essential for preventing premature senescence and aging by enabling efficient mRNA translation. The heterodimer of METTL1-WDR4 is responsible for adding methylation group to the N7 atom of guanine (m7G) in tRNA molecules. Here the authors show how the tRNA m7G modification mediates tRNA stability to control proteostasis by maintaining efficient protein synthesis, which is important for preventing premature senescence and aging. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. A specific innate immune response silences the virulence of Pseudomonas aeruginosa in a latent infection model in the Drosophila melanogaster host.
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Chen, Jing, Lin, Guiying, Ma, Kaiyu, Li, Zi, Liégeois, Samuel, and Ferrandon, Dominique
- Subjects
PSEUDOMONAS aeruginosa infections ,DROSOPHILA melanogaster ,LATENT infection ,PSEUDOMONAS aeruginosa ,IMMUNE response ,VIRULENCE of bacteria ,WOLBACHIA - Abstract
Microbial pathogenicity often depends on the route of infection. For instance, P. aeruginosa or S. marcescens cause acute systemic infections when low numbers of bacteria are injected into D. melanogaster flies whereas flies succumb much slower to the continuous ingestion of these pathogens, even though both manage to escape from the gut compartment and reach the hemocoel. Here, we have developed a latent P. aeruginosa infection model by feeding flies on the bacteria for a short period. The bacteria stably colonize internal tissues yet hardly cause any damage since latently-infected flies live almost as long as noninfected control flies. The apparently dormant bacteria display particular characteristics in terms of bacterial colony morphology, composition of the outer cell wall, and motility. The virulence of these bacteria can however be reactivated upon wounding the host. We show that melanization but not the cellular or the systemic humoral response is the predominant host defense that establishes latency and may coerce the bacteria to a dormant state. In addition, the lasting activation of the melanization responses in latently-infected flies provides a degree of protection to the host against a secondary fungal infection. Latent infections by an ingested pathogen protects against a variety of homologous or heterologous systemic secondary infectious challenges, a situation previously described for the endosymbiotic Wolbachia bacteria, a guard against viral infections. Author summary: Environmentally ubiquitous bacteria have acquired extensive abilities to adapt to variable environments, bestowing to some of them the potential to become opportunistic pathogens. This may translate into distinct infection modes according to the route of entry. Whereas Pseudomonas aeruginosa is considered to have two major modes of infection, acute by planktonic cells or chronic through the establishment of biofilms, we report here a novel type of infection whereby ingested bacteria escape from the digestive tract and silently colonize tissues as single cells without strongly affecting the lifespan of the Drosophila host. The bacteria appear to be dormant, a feature shared with persister cells that elude the action of antibiotics. They are characterized by distinct bacterial and colony morphologies, cell surface and motility properties. Their virulence program can nevertheless be reactivated spontaneously or upon injury. We also report that an important host defense of invertebrates, melanization, is activated upon escape of the bacteria into the internal milieu. This activation not only promotes the dormancy of the colonizing bacteria but also protects the host to some degree against secondary infections. As P. aeruginosa is a member of the microbiota of a sizable fraction of human populations, these discoveries may become medically relevant. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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- View/download PDF
4. The Toll pathway mediates Drosophila resilience to Aspergillus mycotoxins through specific Bomanins.
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Xu, Rui, Lou, Yanyan, Tidu, Antonin, Bulet, Philippe, Heinekamp, Thorsten, Martin, Franck, Brakhage, Axel, Li, Zi, Liégeois, Samuel, and Ferrandon, Dominique
- Abstract
Host defense against infections encompasses both resistance, which targets microorganisms for neutralization or elimination, and resilience/disease tolerance, which allows the host to withstand/tolerate pathogens and repair damages. In Drosophila, the Toll signaling pathway is thought to mediate resistance against fungal infections by regulating the secretion of antimicrobial peptides, potentially including Bomanins. We find that Aspergillus fumigatus kills Drosophila Toll pathway mutants without invasion because its dissemination is blocked by melanization, suggesting a role for Toll in host defense distinct from resistance. We report that mutants affecting the Toll pathway or the 55C Bomanin locus are susceptible to the injection of two Aspergillus mycotoxins, restrictocin and verruculogen. The vulnerability of 55C deletion mutants to these mycotoxins is rescued by the overexpression of Bomanins specific to each challenge. Mechanistically, flies in which BomS6 is expressed in the nervous system exhibit an enhanced recovery from the tremors induced by injected verruculogen and display improved survival. Thus, innate immunity also protects the host against the action of microbial toxins through secreted peptides and thereby increases its resilience to infection. Synopsis: Toll signaling is thought to mediate fungal resistance by regulating the secretion of antimicrobial peptides. This study shows that Toll signaling is not needed to prevent Aspergillus fumigatus invasion but protects Drosophila against specific mycotoxins. Melanization but not the Toll pathway prevents the proliferation and dissemination of A. fumigatus in flies.Toll mutant flies succumb to A. fumigatus secreted mycotoxins restrictocin and verruculogen.Specific Bomanins as well as other Toll targets prevent restrictocin from efficiently cleaving its 28S RNA substrate.BomS6 expressed in the brain mediates fast recovery from toxic effects of verruculogen and thereby protects the host. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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5. The fliR gene contributes to the virulence of S. marcescens in a Drosophila intestinal infection model.
- Author
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Sina Rahme, Bechara, Lestradet, Matthieu, Di Venanzio, Gisela, Ayyaz, Arshad, Yamba, Miriam Wennida, Lazzaro, Martina, Liégeois, Samuel, Garcia Véscovi, Eleonora, and Ferrandon, Dominique
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INTESTINAL infections ,DROSOPHILA ,SERRATIA marcescens ,DROSOPHILA melanogaster ,GENETIC testing ,DROSOPHILIDAE - Abstract
Serratia marcescens is an opportunistic bacterium that infects a wide range of hosts including humans. It is a potent pathogen in a septic injury model of Drosophila melanogaster since a few bacteria directly injected in the body cavity kill the insect within a day. In contrast, flies do not succumb to ingested bacteria for days even though some bacteria cross the intestinal barrier into the hemolymph within hours. The mechanisms by which S. marcescens attacks enterocytes and damages the intestinal epithelium remain uncharacterized. To better understand intestinal infections, we performed a genetic screen for loss of virulence of ingested S. marcescens and identified FliR, a structural component of the flagellum, as a virulence factor. Next, we compared the virulence of two flagellum mutants fliR and flhD in two distinct S. marcescens strains. Both genes are required for S. marcescens to escape the gut lumen into the hemocoel, indicating that the flagellum plays an important role for the passage of bacteria through the intestinal barrier. Unexpectedly, fliR but not flhD is involved in S. marcescens-mediated damages of the intestinal epithelium that ultimately contribute to the demise of the host. Our results therefore suggest a flagellum-independent role for fliR in bacterial virulence. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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6. Cyclin J–CDK complexes limit innate immune responses by reducing proinflammatory changes in macrophage metabolism.
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Chong, Yee Kien, Tartey, Sarang, Yoshikawa, Yuki, Imami, Koshi, Li, Songling, Yoshinaga, Masanori, Hirabayashi, Ai, Liu, Guohao, Vandenbon, Alexis, Hia, Fabian, Uehata, Takuya, Mino, Takashi, Suzuki, Yutaka, Noda, Takeshi, Ferrandon, Dominique, Standley, Daron M., Ishihama, Yasushi, and Takeuchi, Osamu
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CYCLINS ,CYCLIN-dependent kinases ,IMMUNE response ,GLYCOLYSIS ,TYPE I interferons ,MITOCHONDRIAL proteins ,MACROPHAGE inflammatory proteins ,HEAT shock proteins - Abstract
Toll-like receptor (TLR) stimulation induces glycolysis and the production of mitochondrial reactive oxygen species (ROS), both of which are critical for inflammatory responses in macrophages. Here, we demonstrated that cyclin J, a TLR-inducible member of the cyclin family, reduced cytokine production in macrophages by coordinately controlling glycolysis and mitochondrial functions. Cyclin J interacted with cyclin-dependent kinases (CDKs), which increased the phosphorylation of a subset of CDK substrates, including the transcription factor FoxK1 and the GTPase Drp1. Cyclin J–dependent phosphorylation of FoxK1 decreased the transcription of glycolytic genes and Hif-1α activation, whereas hyperactivation of Drp1 by cyclin J–dependent phosphorylation promoted mitochondrial fragmentation and impaired the production of mitochondrial ROS. In mice, cyclin J in macrophages limited the growth of tumor xenografts and protected against LPS-induced shock but increased the susceptibility to bacterial infection. Collectively, our findings indicate that cyclin J–CDK signaling promotes antitumor immunity and the resolution of inflammation by opposing the metabolic changes that drive inflammatory responses in macrophages. Cyclin macrophages off: The activation of macrophages stimulates metabolic changes that are critical for these cells to respond to infections and tumors. Chong et al. found that cyclin J suppressed macrophage activation through a cell cycle–independent mechanism. Stimulating mouse macrophages with lipopolysaccharide (LPS) or type I interferon induced the expression of the gene encoding cyclin J, and constitutive expression of cyclin J in macrophages attenuated LPS-induced metabolic reprogramming and inflammatory responses. Mechanistically, cyclin J interacted with cyclin-dependent kinases (CDKs) to promote phosphorylation of the transcription factor FoxK1 and the mitochondrial fission protein Drp1, leading to reductions in glycolysis and reactive oxygen species production and an increase in mitochondrial fragmentation. Macrophage-specific loss of cyclin J sensitized mice to LPS-induced shock and increased the growth of tumor xenografts but protected against infection. Cyclin J therefore restrains macrophage responses by dampening activation-induced metabolic reprogramming. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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7. Phagocytosis Is the Sole Arm of Drosophila melanogaster Known Host Defenses That Provides Some Protection Against Microsporidia Infection.
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Caravello, Gaëtan, Franchet, Adrien, Niehus, Sebastian, and Ferrandon, Dominique
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MICROSPORIDIOSIS ,DROSOPHILA melanogaster ,PHAGOCYTOSIS ,INSECT defenses ,INTRACELLULAR pathogens ,REACTIVE oxygen species - Abstract
Microsporidia are obligate intracellular parasites able to infest specifically a large range of species, including insects. The knowledge about the biology of microsporidial infections remains confined to mostly descriptive studies, including molecular approaches such as transcriptomics or proteomics. Thus, functional data to understand insect host defenses are currently lacking. Here, we have undertaken a genetic analysis of known host defenses of the Drosophila melanogaster using an infection model whereby Tubulinosema ratisbonensis spores are directly injected in this insect. We find that phagocytosis does confer some protection in this infection model. In contrast, the systemic immune response, extracellular reactive oxygen species, thioester proteins, xenophagy, and intracellular antiviral response pathways do not appear to be involved in the resistance against this parasite. Unexpectedly, several genes such as PGRP-LE seem to promote this infection. The prophenol oxidases that mediate melanization have different functions; PPO1 presents a phenotype similar to that of PGRP-LE whereas that of PPO2 suggests a function in the resilience to infection. Similarly, eiger and Unpaired3 , which encode two cytokines secreted by hemocytes display a resilience phenotype with a strong susceptibility to T. ratisbonensis. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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8. The fliR gene contributes to the virulence of S. marcescens in a Drosophila intestinal infection model.
- Author
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Sina Rahme, Bechara, Lestradet, Matthieu, Di Venanzio, Gisela, Ayyaz, Arshad, Yamba, Miriam Wennida, Lazzaro, Martina, Liégeois, Samuel, Garcia Véscovi, Eleonora, and Ferrandon, Dominique
- Subjects
INTESTINAL infections ,SERRATIA marcescens ,DROSOPHILA melanogaster ,GREATER wax moth ,GENETIC testing ,DROSOPHILA ,FLAGELLA (Microbiology) - Abstract
Serratia marcescens is an opportunistic bacterium that infects a wide range of hosts including humans. It is a potent pathogen in a septic injury model of Drosophila melanogaster since a few bacteria directly injected in the body cavity kill the insect within a day. In contrast, flies do not succumb to ingested bacteria for days even though some bacteria cross the intestinal barrier into the hemolymph within hours. The mechanisms by which S. marcescens attacks enterocytes and damages the intestinal epithelium remain uncharacterized. To better understand intestinal infections, we performed a genetic screen for loss of virulence of ingested S. marcescens and identified FliR, a structural component of the flagellum, as a virulence factor. Next, we compared the virulence of two flagellum mutants fliR and flhD in two distinct S. marcescens strains. Both genes are required for S. marcescens to escape the gut lumen into the hemocoel, indicating that the flagellum plays an important role for the passage of bacteria through the intestinal barrier. Unexpectedly, fliR but not flhD is involved in S. marcescens-mediated damages of the intestinal epithelium that ultimately contribute to the demise of the host. Our results therefore suggest a flagellum-independent role for fliR in bacterial virulence. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
9. Sensing microbial infections in the Drosophila melanogaster genetic model organism.
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Liegeois, Samuel and Ferrandon, Dominique
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DROSOPHILA melanogaster ,GENETIC models ,DOUBLE-stranded RNA ,NATURAL immunity ,MICROBIAL virulence ,DROSOPHILIDAE - Abstract
Insects occupy a central position in the biosphere. They are able to resist infections even though they lack an adaptive immune system. Drosophila melanogaster has been used as a potent genetic model to understand innate immunity both in invertebrates and vertebrates. Its immune system includes both humoral and cellular arms. Here, we review how the distinct immune responses are triggered upon sensing infections, with an emphasis on the mechanisms that lead to systemic humoral immune responses. As in plants, the components of the cell wall of microorganisms are detected by dedicated receptors. There is also an induction of the systemic immune response upon sensing the proteolytic activities of microbial virulence factors. The antiviral response mostly relies on sensing double-stranded RNAs generated during the viral infection cycle. This event subsequently triggers either the viral short interfering RNA pathway or a cGAS-like/STING/NF-κB signaling pathway. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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10. An initial assessment of the involvement of transglutaminase2 in eosinophilic bronchitis using a disease model developed in C57BL/6 mice.
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Chen, Lan, Liu, Shuyan, Xiao, Linzhuo, Chen, Kanyao, Tang, Juanjuan, Huang, Chuqin, Luo, Wei, Ferrandon, Dominique, Lai, Kefang, and Li, Zi
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TRANSGLUTAMINASES ,EOSINOPHILIA ,MEDICAL model ,ASTHMA ,OVALBUMINS - Abstract
The detailed pathogenesis of eosinophilic bronchitis (EB) remains unclear. Transglutaminase 2 (TG2) has been implicated in many respiratory diseases including asthma. Herein, we aim to assess preliminarily the relationship of TG2 with EB in the context of the development of an appropriate EB model through ovalbumin (OVA) sensitization and challenge in the C57BL/6 mouse strain. Our data lead us to propose a 50 μg dose of OVA challenge as appropriate to establish an EB model in C57BL/6 mice, whereas a challenge with a 400 μg dose of OVA significantly induced asthma. Compared to controls, TG2 is up-regulated in the airway epithelium of EB mice and EB patients. When TG2 activity was inhibited by cystamine treatment, there were no effects on airway responsiveness; in contrast, the lung pathology score and eosinophil counts in bronchoalveolar lavage fluid were significantly increased whereas the cough frequency was significantly decreased. The expression levels of interleukin (IL)-4, IL-13, IL-6, mast cell protease7 and the transient receptor potential (TRP) ankyrin 1 (TRPA1), TRP vanilloid 1 (TRPV1) were significantly decreased. These data open the possibility of an involvement of TG2 in mediating the increased cough frequency in EB through the regulation of TRPA1 and TRPV1 expression. The establishment of an EB model in C57BL/6 mice opens the way for a genetic investigation of the involvement of TG2 and other molecules in this disease using KO mice, which are often generated in the C57BL/6 genetic background. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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11. Differential Requirements for Mediator Complex Subunits in Drosophila melanogaster Host Defense Against Fungal and Bacterial Pathogens.
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Huang, Chuqin, Xu, Rui, Liégeois, Samuel, Chen, Di, Li, Zi, and Ferrandon, Dominique
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DROSOPHILA melanogaster ,GRAM-positive bacterial infections ,ERWINIA ,ENTEROCOCCUS ,HUMORAL immunity ,ERWINIA carotovora ,RNA polymerases - Abstract
The humoral immune response to bacterial or fungal infections in Drosophila relies largely on a transcriptional response mediated by the Toll and Immune deficiency NF-κB pathways. Antimicrobial peptides are potent effectors of these pathways and allow the organism to attack invading pathogens. Dorsal-related Immune Factor (DIF), a transcription factor regulated by the Toll pathway, is required in the host defense against fungal and some Gram-positive bacterial infections. The Mediator complex is involved in the initiation of transcription of most RNA polymerase B (PolB)-dependent genes by forming a functional bridge between transcription factors bound to enhancer regions and the gene promoter region and then recruiting the PolB pre-initiation complex. Mediator is formed by several modules that each comprises several subunits. The Med17 subunit of the head module of Mediator has been shown to be required for the expression of Drosomycin , which encodes a potent antifungal peptide, by binding to DIF. Thus, Mediator is expected to mediate the host defense against pathogens controlled by the Toll pathway-dependent innate immune response. Here, we first focus on the Med31 subunit of the middle module of Mediator and find that it is required in host defense against Aspergillus fumigatus , Enterococcus faecalis , and injected but not topically-applied Metarhizium robertsii. Thus, host defense against M. robertsii requires Dif but not necessarily Med31 in the two distinct infection models. The induction of some Toll-pathway-dependent genes is decreased after a challenge of Med31 RNAi-silenced flies with either A. fumigatus or E. faecalis , while these flies exhibit normal phagocytosis and melanization. We have further tested most Mediator subunits using RNAi by monitoring their survival after challenges to several other microbial infections known to be fought off through DIF. We report that the host defense against specific pathogens involves a distinct set of Mediator subunits with only one subunit for C. glabrata or Erwinia carotovora carotovora , at least one for M. robertsii or a somewhat extended repertoire for A. fumigatus (at least eight subunits) and E. faecalis (eight subunits), with two subunits, Med6 and Med11 being required only against A. fumigatus. Med31 but not Med17 is required in fighting off injected M. robertsii conidia. Thus, the involvement of Mediator in Drosophila innate immunity is more complex than expected. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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12. Quorum‐sensing regulator RhlR but not its autoinducer RhlI enables <italic>Pseudomonas</italic> to evade opsonization.
- Author
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Haller, Samantha, Franchet, Adrien, Hakkim, Abdul, Chen, Jing, Drenkard, Eliana, Yu, Shen, Schirmeier, Stefanie, Li, Zi, Martins, Nelson, Ausubel, Frederick M., Liégeois, Samuel, and Ferrandon, Dominique
- Abstract
Abstract: When
Drosophila melanogaster feeds onPseudomonas aeruginosa , some bacteria cross the intestinal barrier and eventually proliferate in the hemocoel. This process is limited by hemocytes through phagocytosis.P. aeruginosa requires the quorum‐sensing regulator RhlR to elude the cellular immune response of the fly. RhlI synthesizes the autoinducer signal that activates RhlR. Here, we show thatrhlI mutants are unexpectedly more virulent thanrhlR mutants, both in fly and in nematode intestinal infection models, suggesting that RhlR has RhlI‐independent functions. We also report that RhlR protectsP. aeruginosa from opsonization mediated by theDrosophila thioester‐containing protein 4 (Tep4).RhlR mutant bacteria show higher levels ofTep4‐ mediated opsonization, as compared torhlI mutants, which prevents lethal bacteremia in theDrosophila hemocoel. In contrast, in a septic model of infection, in which bacteria are introduced directly into the hemocoel,Tep4 mutant flies are more resistant to wild‐typeP. aeruginosa, but not to therhlR mutant. Thus, depending on the infection route, the Tep4 opsonin can either be protective or detrimental to host defense. [ABSTRACT FROM AUTHOR]- Published
- 2018
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13. Positive Feedback regulation between Transglutaminase 2 and Toll-like receptor 4 signaling in hepatic stellate cells correlates with liver Fibrosis Post Schistosoma japonicum infection.
- Author
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Zhencheng Wen, Xiaofang Ji, Juanjuan Tang, Guiying Lin, Linzhuo Xiao, Cuiying Liang, Manni Wang, Fang Su, Ferrandon, Dominique, and Zi Li
- Subjects
SCHISTOSOMA japonicum ,TRANSGLUTAMINASE regulation ,TOLL-like receptors - Abstract
Universitα de Strasbourg, RIDI UPR9022 du CNRS, Strasbourg, France Liver fibrosis induced by Schistosoma japonicum (Sj) infection is characterized by the accumulation of extracellular matrix (ECM). The activated and differentiated hepatic stellate cells (HSCs) are the predominant ECM-producing cell type in the liver. Toll-like receptor (TLR) 4 pathway activation plays a key role in mice liver fibrosis models induced by alcohol, biliary ligation, and carbon tetrachloride 4. In this work, we found that TLR4 pathway activation correlated with the severity of liver fibrosis post Sj infection. The TLR4 receptor inhibitor TAK242 reduced the extent of liver fibrosis. The increased expression of TLR4, α-smooth muscle actin (α-SMA), and cytoglobin was observed in the HSCs of mouse liver after Sj infection. In response to stimulation with either lipopolysaccharide or Sj's soluble egg antigen (SEA), high levels of TLR4 and α-SMA were induced in HSCs and were inhibited by TAK242 treatment. In previous work, we had reported that a high level of transglutaminase 2 (TGM2) is crucial for liver fibrosis post Sj infection. Herein, we found that TLR4 signaling also controlled Tgm2 expression. Inhibition of TGM2 activity by cystamine (CTM) in Sj-infected mice or in HSCs induced with all-trans-retinoic acid (ATRA) stimulation led to a lowered activation of TLR4 signaling and a reduced α-SMA expression. These results were confirmed by downregulating the Tgm2 gene by specific siRNA. These observations implied the presence of a positive feedback regulation between TGM2 and TLR4 signaling in HSCs that correlated with liver fibrosis post Sj infection. This novel connection between TGM2 and TLR4 pathway activation in liver fibrosis induced by Sj infection enhances our understanding of liver diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
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14. Drosophila as a Model for Intestinal Infections.
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Lestradet, Matthieu, Lee, Kwang-Zin, and Ferrandon, Dominique
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- 2014
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15. Assessing Pseudomonas Virulence with a Nonmammalian Host: Drosophila melanogaster.
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Haller, Samantha, Limmer, Stefanie, and Ferrandon, Dominique
- Published
- 2014
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16. Ensuita purgare ! Les entérocytes exposés à une infection bactérienne suivent les prescriptions du Dr Purgon.
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Socha, Catherine, Lestradet, Matthieu, and Ferrandon, Dominique
- Published
- 2017
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17. Enteroendocrine Cells Support Intestinal Stem-Cell-Mediated Homeostasis in Drosophila.
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Amcheslavsky, Alla, Song, Wei, Li, Qi, Nie, Yingchao, Bragatto, Ivan, Ferrandon, Dominique, Perrimon, Norbert, and Ip, Y. Tony
- Abstract
Summary Intestinal stem cells in the adult Drosophila midgut are regulated by growth factors produced from the surrounding niche cells including enterocytes and visceral muscle. The role of the other major cell type, the secretory enteroendocrine cells, in regulating intestinal stem cells remains unclear. We show here that newly eclosed scute loss-of-function mutant flies are completely devoid of enteroendocrine cells. These enteroendocrine cell-less flies have normal ingestion and fecundity but shorter lifespan. Moreover, in these newly eclosed mutant flies, the diet-stimulated midgut growth that depends on the insulin-like peptide 3 expression in the surrounding muscle is defective. The depletion of Tachykinin-producing enteroendocrine cells or knockdown of Tachykinin leads to a similar although less severe phenotype. These results establish that enteroendocrine cells serve as an important link between diet and visceral muscle expression of an insulin-like growth factor to stimulate intestinal stem cell proliferation and tissue growth. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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18. Fly culture collapse disorder.
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Niehus, Sebastian, Giammarinaro, Philippe, Liégeois, Samuel, Quintin, Jessica, and Ferrandon, Dominique
- Published
- 2012
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19. Pseudomonas aeruginosa RhIR is required to neutralize the cellular immune response in a Drosophila melanogaster oral infection model.
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Limmer, Stefanie, Haller, Samantha, Drenkard, Eliana, Lee, Janice, Shen Yu, Kocks, Christine, Ausubel, Frederick M., and Ferrandon, Dominique
- Subjects
DROSOPHILA melanogaster ,PSEUDOMONAS aeruginosa ,IMMUNE response ,HOST-parasite relationships ,BACTEREMIA ,IMMUNODEFICIENCY ,NEUTRALIZATION (Chemistry) - Abstract
An in-depth mechanistic understanding of microbial infection necessitates a molecular dissection of host-pathogen relationships. Both Drosophila melanogaster and Pseudomonas aeruginosa have been intensively studied. Here, we analyze the infection of D. melanogaster by P. aeruginosa by using mutants in both host and pathogen. We show that orally ingested P. aeruginosa crosses the intestinal barrier and then proliferates in the hemolymph, thereby causing the infected flies to die of bacteremia. Host defenses against ingested P. aeruginosa included an immune deficiency (IMD) response in the intestinal epithelium, systemic Toll and IMD pathway responses, and a cellular immune response controlling bacteria in the hemocoel. Although the observed cellular and intestinal immune responses appeared to act throughout the course of the infection, there was a late onset of the systemic IMD and Toll responses. In this oral infection model, P. aeruginosa PA14 did not require its type Ill secretion system or other well~studied virulence factors such as the two-component response regulator GacA or the protease AprA for virulence. In contrast, the quorumsensing transcription factor RhIR, but surprisingly not LasR. played a key role in counteracting the cellular immune response against PA14, possibly at an early stage when only a few bacteria are present in the hemocoel. These results illustrate the power of studying infection from the dual perspective of host and pathogen by revealing that RhlR plays a more complex role during pathogenesis than previously appreciated. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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- View/download PDF
20. Relative Roles of the Cellular and Humoral Responses in the Drosophila Host Defense against Three Gram-Positive Bacterial Infections.
- Author
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Nehme, Nadine T., Quintin, Jessica, Ju Hyun Cho, Janice Lee, Lafarge, Marie-Céline, Kocks, Christine, and Ferrandon, Dominique
- Subjects
DROSOPHILA ,BACTERIAL diseases ,IMMUNODEFICIENCY ,MACROPHAGES ,ANTI-infective agents ,MOLECULES - Abstract
Background: Two NF-kappaB signaling pathways, Toll and immune deficiency (imd), are required for survival to bacterial infections in Drosophila. In response to septic injury, these pathways mediate rapid transcriptional activation of distinct sets of effector molecules, including antimicrobial peptides, which are important components of a humoral defense response. However, it is less clear to what extent macrophage-like hemocytes contribute to host defense. Methodology/Principal Findings: In order to dissect the relative importance of humoral and cellular defenses after septic injury with three different Gram-positive bacteria (Micrococcus luteus, Enterococcus faecalis, Staphylococcus aureus), we used latex bead pre-injection to ablate macrophage function in flies wildtype or mutant for various Toll and imd pathway components. We found that in all three infection models a compromised phagocytic system impaired fly survival - independently of concomitant Toll or imd pathway activation. Our data failed to confirm a role of the PGRP-SA and GNBP1 Pattern Recognition Receptors for phagocytosis of S. aureus. The Drosophila scavenger receptor Eater mediates the phagocytosis by hemocytes or S2 cells of E. faecalis and S. aureus, but not of M. luteus. In the case of M. luteus and E. faecalis, but not S. aureus, decreased survival due to defective phagocytosis could be compensated for by genetically enhancing the humoral immune response. Conclusions/Significance: Our results underscore the fundamental importance of both cellular and humoral mechanisms in Drosophila immunity and shed light on the balance between these two arms of host defense depending on the invading pathogen. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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21. Analysis of Thioester-Containing Proteins during the Innate Immune Response of Drosophila melanogaster.
- Author
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Bou Aoun, Richard, Hetru, Charles, Troxler, Laurent, Doucet, Daniel, Ferrandon, Dominique, and Matt, Nicolas
- Published
- 2010
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22. The Drosophila PRR GNBP3 assembles effector complexes involved in antifungal defenses independently of its Toll-pathway activation function.
- Author
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Matskevich, Alexey A., Quintin, Jessica, and Ferrandon, Dominique
- Abstract
The Drosophila Toll-signaling pathway controls the systemic antifungal host response. Gram-negative binding protein 3 (GNBP3), a member of the β-glucan recognition protein family senses fungal infections and activates this pathway. A second detection system perceives the activity of proteolytic fungal virulence factors and redundantly activates Toll. GNBP3 mutant flies succumb more rapidly to Candida albicans and to entomopathogenic fungal infections than WT flies, despite normal triggering of the Toll pathway via the virulence detection system. These observations suggest that GNBP3 triggers antifungal defenses that are not dependent on activation of the Toll pathway. Here, we show that GNBP3 agglutinates fungal cells. Furthermore, it can activate melanization in a Toll-independent manner. Melanization is likely to be an essential defense against some fungal infections given that the entomopathogenic fungus Beauveria bassiana inhibits the activity of the main melanization enzymes, the phenol oxidases. Finally, we show that GNBP3 assembles 'attack complexes', which comprise phenoloxidase and the necrotic serpin. We propose that Drosophila GNBP3 targets fungi immediately at the inception of the infection by bringing effector molecules in direct contact with the invading microorganisms. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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23. Candida glabrata environmental stress response involves Saccharomyces cerevisiae Msn2/4 orthologous transcription factors.
- Author
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Roetzer, Andreas, Gregori, Christa, Jennings, Ann Marie, Quintin, Jessica, Ferrandon, Dominique, Butler, Geraldine, Kuchler, Karl, Ammerer, Gustav, and Schüller, Christoph
- Subjects
GENOMES ,SACCHAROMYCES cerevisiae ,CANDIDA albicans ,MUTAGENESIS ,HOMOLOGY (Biology) ,CELLS - Abstract
We determined the genome-wide environmental stress response (ESR) expression profile of Candida glabrata, a human pathogen related to Saccharomyces cerevisiae. Despite different habitats, C. glabrata, S. cerevisiae, Schizosaccharomyces pombe and Candida albicans have a qualitatively similar ESR. We investigate the function of the C. glabrata syntenic orthologues to the ESR transcription factor Msn2. The C. glabrata orthologues CgMsn2 and CgMsn4 contain a motif previously referred to as HD1 (homology domain 1) also present in Msn2 orthologues from fungi closely related to S. cerevisiae. We show that regions including this motif confer stress-regulated intracellular localization when expressed in S. cerevisiae. Site-directed mutagenesis confirms that nuclear export of CgMsn2 in C. glabrata requires an intact HD1. Transcript profiles of CgMsn2/4 mutants and CgMsn2 overexpression strains show that they regulate a part of the CgESR. CgMsn2 complements a S. cerevisiae msn2 null mutant and in stressed C. glabrata cells, rapidly translocates from the cytosol to the nucleus. CgMsn2 is required for full resistance against severe osmotic stress and rapid and full induction of trehalose synthesis genes ( TPS1, TPS2). Constitutive activation of CgMsn2 is detrimental for C. glabrata. These results establish an Msn2-regulated general stress response in C. glabrata. [ABSTRACT FROM AUTHOR]
- Published
- 2008
- Full Text
- View/download PDF
24. The Drosophila systemic immune response: sensing and signalling during bacterial and fungal infections.
- Author
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Ferrandon, Dominique, Imler, Jean-Luc, Hetru, Charles, and Hoffmann, Jules A.
- Subjects
DROSOPHILA melanogaster ,IMMUNE response ,BACTERIAL diseases ,MYCOSES ,IMMUNITY - Abstract
A hallmark of the potent, multifaceted antimicrobial defence of Drosophila melanogaster is the challenge-induced synthesis of several families of antimicrobial peptides by cells in the fat body. The basic mechanisms of recognition of various types of microbial infections by the adult fly are now understood, often in great detail. We have further gained valuable insight into the infection-induced gene reprogramming by nuclear factor-κB (NF-κB) family members under the dependence of complex intracellular signalling cascades. The striking parallels between the adult fly response and mammalian innate immune defences described below point to a common ancestry and validate the relevance of the fly defence as a paradigm for innate immunity. [ABSTRACT FROM AUTHOR]
- Published
- 2007
- Full Text
- View/download PDF
25. A Model of Bacterial Intestinal Infections in Drosophila melanogaster.
- Author
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Nehme, Nadine T., Ligéois, Samuel, Kele, Beatrix, Giammarinaro, Philippe, Pradel, Elizabeth, Hoffmann, Jules A., Ewbank, Jonathan J., and Ferrandon, Dominique
- Subjects
SERRATIA marcescens ,INTESTINAL diseases ,BACTERIAL diseases ,DROSOPHILA melanogaster ,ENDOTOXINS ,ANTIGENS ,PHAGOCYTOSIS ,BLOOD cells - Abstract
Serratia marcescens is an entomopathogenic bacterium that opportunistically infects a wide range of hosts, including humans. In a model of septic injury, if directly introduced into the body cavity of Drosophila, this pathogen is insensitive to the host's systemic immune response and kills flies in a day. We find that S. marcescens resistance to the Drosophila immune deficiency (imd)-mediated humoral response requires the bacterial lipopolysaccharide O-antigen. If ingested by Drosophila, bacteria cross the gut and penetrate the body cavity. During this passage, the bacteria can be observed within the cells of the intestinal epithelium. In such an oral infection model, the flies succumb to infection only after 6 days. We demonstrate that two complementary host defense mechanisms act together against such foodborne infection: an antimicrobial response in the intestine that is regulated by the imd pathway and phagocytosis by hemocytes of bacteria that have escaped into the hemolymph. Interestingly, bacteria present in the hemolymph elicit a systemic immune response only when phagocytosis is blocked. Our observations support a model wherein peptidoglycan fragments released during bacterial growth activate the imd pathway and do not back a proposed role for phagocytosis in the immune activation of the fat body. Thanks to the genetic tools available in both host and pathogen, the molecular dissection of the interactions between S. marcescens and Drosophila will provide a useful paradigm for deciphering intestinal pathogenesis. [ABSTRACT FROM AUTHOR]
- Published
- 2007
- Full Text
- View/download PDF
26. Toll-dependent and Toll-independent immune responses in Drosophila.
- Author
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Imler, Jean-Luc, Ferrandon, Dominique, Royet, Julien, Reichhart, Jean-Marc, Hetru, Charles, and Hoffmann, Jules A.
- Subjects
IMMUNE response ,DROSOPHILA ,GENES ,INFECTION ,INSECTS ,MAMMALS - Abstract
The multifaceted response of the fruitfly Drosophila melanogaster to infection by a wide range of microbes is complex and remarkably efficient. Its most prominent aspect is the immune-inducible expression of a set of potent antimicrobial peptides. Genetic analysis of the regulation of the genes encoding these peptides has led to the identification of the receptor Toll as an essential component of the fly's host defense system. In addition, these studies have revealed that the response to Gram-negative bacterial infections involves Toll-independent mechanisms, and that the sensing of infection involves two structurally distinct sets of molecules – the PGRPs and the GNBPs/βGRPs. [ABSTRACT FROM AUTHOR]
- Published
- 2004
- Full Text
- View/download PDF
27. Toll-dependent and Toll-independent immune responses in Drosophila.
- Author
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Imler, Jean-Luc, Ferrandon, Dominique, Royet, Julien, Reichhart, Jean-Marc, Hetru, Charles, and Hoffmann, Jules A.
- Abstract
The multifaceted response of the fruitfly Drosophila melanogaster to infection by a wide range of microbes is complex and remarkably efficient. Its most prominent aspect is the immune-inducible expression of a set of potent antimicrobial peptides. Genetic analysis of the regulation of the genes encoding these peptides has led to the identification of the receptor Toll as an essential component of the fly's host defense system. In addition, these studies have revealed that the response to Gram-negative bacterial infections involves Toll-independent mechanisms, and that the sensing of infection involves two structurally distinct sets of molecules — the PGRPs and the GNBPs/βGRPs. [ABSTRACT FROM PUBLISHER]
- Published
- 2004
- Full Text
- View/download PDF
28. The Drosophila immune response against Gram-negative bacteria is mediated by a peptidoglycan recognition protein.
- Author
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Gottar, Marie, Gobert, Vanessa, Michel, Tatiana, Belvin, Marcia, Duyk, Geoffrey, Hoffmann, Jules A., Ferrandon, Dominique, and Royet, Julien
- Subjects
IMMUNE response ,DROSOPHILA ,BACTERIAL diseases in animals - Abstract
The antimicrobial defence of Drosophila relies largely on the challenge-induced synthesis of an array of potent antimicrobial peptides by the fat body. The defence against Gram-positive bacteria and natural fungal infections is mediated by the Toll signalling pathway, whereas defence against Gram-negative bacteria is dependent on the Immune deficiency (IMD) pathway. Loss-of-function mutations in either pathway reduce the resistance to corresponding infections. The link between microbial infections and activation of these two pathways has remained elusive. The Toll pathway is activated by Gram-positive bacteria through a circulating Peptidoglycan recognition protein (PGRP-SA). PGRPs appear to be highly conserved from insects to mammals, and the Drosophila genome contains 13 members. Here we report a mutation in a gene coding for a putative transmembrane protein, PGRP-LC, which reduces survival to Gram-negative sepsis but has no effect on the response to Gram-positive bacteria or natural fungal infections. By genetic epistasis, we demonstrate that PGRP-LC acts upstream of the imd gene. The data on PGRP-SA with respect to the response to Gram-positive infections, together with the present report, indicate that the PGRP family has a principal role in sensing microbial infections in Drosophila. [ABSTRACT FROM AUTHOR]
- Published
- 2002
- Full Text
- View/download PDF
29. Role of Drosophila IKKγ in a Toll-independent antibacterial immune response.
- Author
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Rutschmann, Sophie, Jung, Alain C., Zhou, Rui, Silverman, Neal, Hoffmann, Jules A., and Ferrandon, Dominique
- Subjects
DROSOPHILA ,IMMUNE response - Abstract
We have generated, by ethylmethane sulfonate mutagenesis, loss-of-function mutants in the Drosophila homolog of the mammalian I-κB kinase (IKK) complex component IKKγ (also called NEMO). Our data show that Drosophila IKKγ is required for the Relish-dependent immune induction of the genes encoding antibacterial peptides and for resistance to infections by Escherichia coli. However, it is not required for the Toll-DIF?dependent antifungal host defense. The results indicate distinct control mechanisms of the Rel-like transactivators DIF and Relish in the Drosophila innate immune response and show that Drosophila Toll does not signal through a IKKγ-dependent signaling complex. Thus, in contrast to the vertebrate inflammatory response, IKKγ is required for the activation of only one immune signaling pathway in Drosophila. [ABSTRACT FROM AUTHOR]
- Published
- 2000
- Full Text
- View/download PDF
30. RNA-RNA interaction is required for the formation of specific bicoid mRNA 3' UTR-STAUFEN ribonucleoprotein particles.
- Author
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Ferrandon, Dominique, Koch, Iris, Westhof, Eric, and Nüsslein-Volhard, Christiane
- Subjects
RNA-protein interactions ,MESSENGER RNA ,RIBOSOMES ,PROTEINS ,DIMERS ,PROTEIN binding ,DROSOPHILA - Abstract
The formation of the anterior pattern of the Drosophila embryo is dependent on the localization of the mRNA of the morphogen Bicoid (bcd) to the anterior pole of the egg cell. Staufen protein (STAU) is required in a late step of the localization to anchor the bcd mRNA in the anterior cytoplasm. We have shown previously that endogenous STAU associates specifically with injected bcd mRNA 3′-untranslated region (UTR), resulting in the formation of characteristic RNA-protein particles that are transported along microtubules of the mitotic spindles in a directed manner. The regions recognized by STAU in this in vivo assay are predicted to form three stem-loop structures involving large double-stranded stretches. Here, we show that the STAU interaction requires a double-stranded conformation of the stems within the RNA localization signal. In addition, base pairing between two single stranded loops plays a major role in particle formation. This loop-loop interaction is intermolecular, not intramolecular; thus dimers or multimers of the RNA localization signal must be associated with STAU in these particles. The bcd mRNA 3′ UTR can also dimerize in vitro in the absence of STAU. Thus, in addition to RNA-protein interactions, RNA-RNA interaction might be involved in the formation of ribonucleoprotein particles for transport and localization. [ABSTRACT FROM AUTHOR]
- Published
- 1997
- Full Text
- View/download PDF
31. Negative regulation of immune responses on the fly.
- Author
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Lee, Kwang-Zin and Ferrandon, Dominique
- Subjects
DROSOPHILA melanogaster ,IMMUNE response ,NF-kappa B ,INFLAMMATION prevention ,IMMUNODEFICIENCY ,MITOGEN-activated protein kinases ,PLATELET-derived growth factor ,VASCULAR endothelial growth factors - Published
- 2011
- Full Text
- View/download PDF
32. Contribution of tissue transglutaminase to the severity of hepatic fibrosis resulting from Schistosoma japonicum infection through the regulation of IL-33/ST2 expression.
- Author
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Li, Zhi-Yong, Xiao, LinZhuo, Lin, GuiYing, Tang, JuanJuan, Chen, YuQiang, Chen, Lan, Li, BaoQi, Wu, MeiLing, Liu, ShuYan, Huang, ChuQin, Ferrandon, Dominique, and Li, Zi
- Subjects
SCHISTOSOMA japonicum ,HEPATIC fibrosis ,GENE knockout ,INFECTION ,TISSUES ,LIVER - Abstract
Background: Tissue transglutaminase (tTG)-regulating IL-13 plays an important role in the pathogenesis of liver fibrosis resulting from Schistosoma japonicum (Sj) infection. IL-33 and its receptor ST2 are involved in Th2-biased immune responses through the release of IL-5 and IL-13 and subsequent hepatic granuloma pathology induced by Sj infection. However, the relationship between tTG, IL-33/ST2, and liver fibrosis during Schistosoma infection has not been established. Results: This study investigated the link between tTG and IL-33/ST2 in the induction of liver fibrogenesis during Sj infection in mice. The extent of liver fibrosis coincided with an increase in tTG and IL-33/ST2 expression in the liver of infected mice between five to eight weeks, with a peak of correlation at six weeks after Sj infection. The inhibition of tTG activity through cystamine administration or gene knockout alleviated the level of TLR4, NF-κB pathway molecules, IL-33/ST2, and the severity of liver fibrosis resulting from Sj infection. Conclusions: These results indicate that during Sj infection tTG may control liver fibrosis at least partially through TLR4, NF-κB pathway activation and then IL-33/ST2. tTG, IL-33 or ST2 might be promising drug targets against liver fibrosis induced by Sj infection. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
33. Modeling hologenome imbalances in inflammation and cancer.
- Author
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Apidianakis, Yiorgos and Ferrandon, Dominique
- Subjects
INTESTINAL cancer ,INFLAMMATORY bowel diseases ,DISEASE exacerbation ,HUMAN microbiota ,GENOMES ,NEOPLASTIC cell transformation - Abstract
The authors discuss the hologenome imbalances modeling in cancer and inflammation. Topics of opinion and review articles mentioned are adaptation of Koch's postulates in assessing the causation between intestinal disease in cancer patients and pathogen pseudomonas aeruginosa, the role of microbiota on exacerbation of cancer and intestinal inflammation, and the role of innate immunity, stress, and inflammatory signaling pathways in tumorigenesis and intestinal stem cell proliferation.
- Published
- 2014
- Full Text
- View/download PDF
34. Immune cell transdifferentiation: a complex crosstalk between circulating immune cells and the haematopoietic niche.
- Author
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Meister, Marie and Ferrandon, Dominique
- Published
- 2012
- Full Text
- View/download PDF
35. Genome engineering in the yeast pathogen Candida glabrata using the CRISPR-Cas9 system.
- Author
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Enkler, Ludovic, Richer, Delphine, Marchand, Anthony L., Ferrandon, Dominique, and Jossinet, Fabrice
- Published
- 2016
- Full Text
- View/download PDF
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