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Gold and petroleum are also strategic resources of great importance to national security. With the increasing demand for energy, multi-energy cooperative exploration has become an inevitable trend of resource development and utilization. Petroleum and hydrothermal gold deposits may form together, with similar evolutionary trends in their formation, migration, and enrichment. Petroleum reservoirs and gold deposits are closely coupled under certain geological conditions. The solubility of gold in crude oil and its forms of occurrence are important in determining the mechanisms of interaction between gold and petroleum and in facilitating the recovery of gold from gold-bearing petroleum. In this study, the occurrence of gold in crude oil from the Linnan Depression in the Bohai Bay Basin, China, was studied using inductively coupled plasma–mass spectrometry and X-ray photoelectron spectroscopy. Concentrations of gold in crude oil from the Linpan and Shanghe oilfields averaged 44.5 ppb, which is well above the minimum concentration required for hydrothermal gold mineralization. Gold has an affinity with carbon, oxygen, and sulfur, and its concentration in crude oil is positively correlated with total acid and sulfur contents. We speculate that gold may exist in crude oil as complexes with organic acids or thiols, with crude oil thus being a transport medium for gold. [ABSTRACT FROM AUTHOR]

In view of the miniaturization and decentralization characteristics of agricultural equipment factories in China, agricultural equipment manufacturing is well suited to the cloud manufacturing model, but there is no specific research on cloud services optimization for it. To fill the research gap, a cloud service optimization method is proposed in this paper. For the optimization model, the dynamic coefficient strategy and the reliability feedback update strategy are added to the mathematical model to strengthen the applicability of farming season. As optimization algorithm, a dynamic artificial ant-bee colony algorithm (DAABA) based on artificial ant colony algorithm and bee colony algorithm is presented. The optimal fusion evaluation strategy is used to save optimization time by reducing the useless iteration, and the iterative adjustment threshold strategy is adopted to improve the accuracy of cloud service by increasing the size of bee colony. Finally, the performance of DAABA is verified to be more superior by comparing with other algorithms. [ABSTRACT FROM AUTHOR]

Many metal deposits were formed by carbonic fluids (rich in CO2) as indicated by fluid inclusions in minerals, but the precise role of CO2 in metal mineralization remains unclear. The main components in fluid inclusions, i.e. H2O and CO2, correspond to the decomposed products of organic acids, which lead us to consider that in the mineralization process the organic acids transport and then discharge metals when they are stable and unstable, respectively. Here we show that the thermal stability of copper acetate solution at 15–350 °C (0.1–830 MPa) provides insight as to the role of organic acids in metal transport. Results show that the copper acetate solution is stable at high P-T conditions under low geothermal gradient of <19 °C/km, with an isochore of P = 1.89 T + 128.58, verifying the possibility of copper transportation as acetate solution. Increasing geothermal gradient leads to thermal dissociation of copper acetate in the way of 4Cu(CH3 COO)2 + 2H2O = 4Cu + 2CO2 + 7CH3COOH. The experimental results and inferences in this contribution agree well with the frequently observed fluid inclusions and wall-rock alterations of carbonate, sericite and quartz in hydrothermal deposits, and provide a new dimension in the understanding of the role of CO2 during mineralization. [ABSTRACT FROM AUTHOR]

The exploration of high production, natural gas wells (>106 m3/d) has been extremely successful in the Gaoshiti and Moxi areas of the Leshan–Longnvsi paleo‐uplift, in the west‐central Sichuan Basin. This paper focuses on the Sinian and Cambrian reservoirs from the Gaoshiti and Moxi areas, where a dataset of new trace elements in bitumen and potential source rock is reported and where hydrocarbon‐source correlation is attempted based on trace elements characteristics of the 12 potential source rocks and 22 bitumen samples. Results show that the bitumen from the three reservoirs can be distinguished from each other using trace element distribution patterns and redox‐ and provenance‐sensitive elemental ratios. Bitumen in the second and fourth members of the Sinian Dengying Formation were derived primarily from the third member of the source rocks of the Dengying Formation, which represents a self‐sourced paleo‐petroleum system. In contrast, bitumen in the reservoirs of the Cambrian Longwangmiao Formation is derived from the Cambrian Qiongzhusi Formation and third member of Dengying Formation. The trace element method used in this study improves our understanding of the complex hydrocarbon–source relation and confirm the potential target for petroleum exploration in the study area. [ABSTRACT FROM AUTHOR]

• gma-miR169c is widely expressed in soybean tissues and induced by polyethylene glycol, high salt levels, cold stress and abscisic acid. • Arabidopsis overexpressing gma-miR169c is more sensitive to drought stress, with reduced survival, accelerated leaf water loss, and shorter root length than the wild-type plants. • gma-miR169c negatively regulates the drought stress response by inhibiting the expression of the targets AtNFYA1 and AtNFYA5 and reducing the transcript levels of the stress response genes AtRD29A , AtRD22 , AtGSTU25 and AtCOR15A. The miR169 family, a large-scale microRNA gene family conserved in plants, is involved in stress responses, although how soybean miR169 functions in response to drought stress remains unclear. We show that gma-miR169c exerts a negative regulatory role in the response to drought stress by inhibiting the expression of its target gene, nuclear factor Y–A (NF-YA). A real-time RT-PCR analysis indicated that gma-miR169c is widely expressed in soybean tissues and induced by polyethylene glycol (PEG), high salt, cold stress and abscisic acid (ABA). Histochemical ß-glucuronidase (GUS) staining showed that the gma-miR169c promoter drives GUS reporter gene expression in various transgenic Arabidopsis tissues, and the stress-induced pattern was confirmed in transgenic Arabidopsis and transgenic soybean hairy roots. Arabidopsis overexpressing gma-miR169c is more sensitive to drought stress, with reduced survival, accelerated leaf water loss, and shorter root length than wild-type plants. We identified a precise cleavage site for 10 gma-miR169c targets and found reduced transcript levels of the AtNFYA1 and AtNFYA5 transcription factors in gma-miR169c -overexpressing Arabidopsis and reduced expression of the stress response genes AtRD29A , AtRD22 , AtGSTU25 and AtCOR15A. These results indicate that gma-miR169c plays a negative regulatory role in drought stress and is a candidate miRNA for improving plant drought adaptation. [ABSTRACT FROM AUTHOR]

Online Analytical Processing, or OLAP, is an approach to answering multidimensional analytical (MDA) queries in an interactive way. However, the traditional OLAP approaches can only deal with structured data, but not unstructured textual data like tweets. To address this problem, we propose a Latent Dirichlet Allocation (LDA)-based model, called Multilayered Semantic LDA (MS-LDA), which detects the hidden layered interests from Twitter data based on LDA. The layered dimension of interests can be further used to apply OLAP techniques to Twitter data. Furthermore, MS-LDA employs the semantic similarity among words of tweets based on word2vec, and also the social relationship among twitters, to improve its effectiveness. The extensive experiments demonstrate that MS-LDA can effectively extract the dimension hierarchy of tweeters' interests for OLAP. [ABSTRACT FROM AUTHOR]

MYB transcription factors are a large family of proteins involved in plant development and responses to stress. In this study, the wheat salinity-induced R2R3-MYB transcription factor TaSIM was functionally characterized, with a focus on its role in salt stress tolerance. TaSIM protein enters the nucleus and binds to the MYB-binding site II motif. Expression analysis revealed that TaSIM was induced by drought, high salinity, low temperature, and abscisic acid treatment. Overexpression of TaSIM improved salt stress tolerance in transgenic plants. Furthermore, the transcript levels of genes involved in abscisic acid (ABA)-dependent ( RD22 ) and ABA-independent ( RD29A ) signaling were higher in TaSIM -overexpressing plants than in the wild type. These results suggest that TaSIM positively modulates salt stress tolerance and has potential applications in molecular breeding to enhance salt tolerance in crops. [ABSTRACT FROM AUTHOR]

• A distinct oil group was discovered in the Dongying Depression. • Related source rock of the distinct oil group has abundant bacteria/algae inputs. • Norcholestanes and triaromatic steroids are effectively used in oil classification. • This oil group has a higher abundance of nordiacholestanes than norcholestanes. • This oil group contains extremely high abundances of 4-methyltriaromatic steroids. The lower third and upper fourth members of the Eocene Shahejie Formation (lower Es3 and upper Es4) are known as two sets of effective source rocks in the Dongying Depression, Bohai Bay Basin. In this study, the saturated and aromatic steroids of 20 crude oil samples from the Dongying Depression were systematically investigated using gas chromatography–mass spectrometry (GC–MS) and GC–MS metastable reaction monitoring. Based on the distribution patterns of the steranes, norcholestanes, and triaromatic steroids, the Group I and II oils were clearly identified and shown to be derived from the lower Es3 and upper Es4 source rocks, respectively. Significantly, it was discovered that three oil samples collected from the Eocene Kongdian Formation and the Ordovician reservoirs exhibit completely different steroid and isotopic compositions from those of the Group I and II oils. These oils, as a distinct oil group (Group III), have the characteristics of abnormally high concentrations of C 29 steranes, 24-nordiacholestane, 27-nordiacholestane, C 28 triaromatic steroids, C 27 4α-methyltriaromatic steroids, and C 29 4α-methyl-24-ethyltriaromatic steroids, and low concentrations of 24-norcholestane, 27-norcholestane and triaromatic dinosteroids, and 13C depletion. Although the related source rock of Group III oils needs to be further clarified in the study area, the 13C depletion, abundant C 29 steranes, and low 24-norcholestane content may suggest greater bacteria/algae inputs (e.g., green algae rather than dinoflagellates) than both the lower Es3 and upper Es4 source rocks. Identification of the Group III oils indicates that the norcholestanes and triaromatic steroids may be more effective molecular fossils for the classification of crude oils in complicated petroleum exploration fields. [ABSTRACT FROM AUTHOR]

Background: Natural antisense transcripts (NATs) are a class of RNAs that contain a sequence complementary to other transcripts. NATs occur widely in eukaryotes and play critical roles in post-transcriptional regulation. Soybean NAT sequences are predicted in the PlantNATsDB, but detailed analyses of these NATs remain to be performed. Results: A total of 26,216 NATs, including 994 cis-NATs and 25,222 trans-NATs, were predicted in soybean. Each sense transcript had 1-177 antisense transcripts. We identified 21 trans-NATs using RT-PCR amplification. Additionally, we identified 179 cis-NATs and 6,629 trans-NATs that gave rise to small RNAs; these were enriched in the NAT overlapping region. The most abundant small RNAs were 21, 22, and 24 nt in length. The generation of small RNAs was biased to one stand of the NATs, and the degradation of NATs was biased. High-throughput sequencing of the degradome allowed for the global identification of NAT small interfering RNAs (nat-siRNAs) targets. 446 target genes for 165 of these nat-siRNAs were identified. The nat-siRNA target could be one transcript of a given NAT, or from other gene transcripts. We identified five NAT transcripts containing a hairpin structure that is characteristic of pre-miRNA. We identified a total of 86 microRNA (miRNA) targets that had antisense transcripts in soybean. Conclusions: We globally identified nat-siRNAs, and the targets of nat-siRNAs in soybean. It is likely that the cis-NATs, trans-NATs, nat-siRNAs, miRNAs, and miRNA targets form complex regulatory networks. [ABSTRACT FROM AUTHOR]

Plant microRNAs (miRNAs) regulate gene expression mainly by guiding cleavage of target mRNAs. In this study, a degradome library constructed from different soybean ( Glycine max (L.) Merr.) tissues was deep-sequenced. 428 potential targets of small interfering RNAs and 25 novel miRNA families were identified. A total of 211 potential miRNA targets, including 174 conserved miRNA targets and 37 soybean-specific miRNA targets, were identified. Among them, 121 targets were first discovered in soybean. The signature distribution of soybean primary miRNAs (pri-miRNAs) showed that most pri-miRNAs had the characteristic pattern of Dicer processing. The biogenesis of TAS3 small interfering RNAs (siRNAs) was conserved in soybean, and nine Auxin Response Factors were identified as TAS3 siRNA targets. Twenty-three miRNA targets produced secondary small interfering RNAs (siRNAs) in soybean. These targets were guided by five miRNAs: gma-miR393, gma-miR1508, gma-miR1510, gma-miR1514, and novel-11. Multiple targets of these secondary siRNAs were detected. These 23 miRNA targets may be the putative novel TAS genes in soybean. Global identification of miRNA targets and potential novel TAS genes will contribute to research on the functions of miRNAs in soybean. [ABSTRACT FROM AUTHOR]

Abstract: MicroRNAs, key posttranscriptional regulators of eukaryotic gene expression, play important roles in plant development and response to stress. In this study, a soybean gma-MIR394a gene was functionally characterized, especially with regard to its role in drought stress resistance. Expression analysis revealed that gma-MIR394a was expressed differentially in various soybean tissues and was induced by drought, high salinity, low temperature stress, and abscisic acid treatment in leaves. One target gene of gma-miR394a, Glyma08g11030, was predicted and verified using a modified 5′ RLM-RACE (RNA ligase-mediated rapid amplification of 5′ cDNA ends) assay. Overexpression of gma-MIR394a resulted in plants with lowered leaf water loss and enhanced drought tolerance. Furthermore, overexpression of gma-MIR394a in Arabidopsis reduced the transcript of an F-box gene (At1g27340) containing a miR394 complementary target site. These results suggest that the gma-MIR394a gene functions in positive modulation of drought stress tolerance and has potential applications in molecular breeding to enhance drought tolerance in crops. [Copyright &y& Elsevier]

The Qiyugou deposit, in the Xiong’er terrane, Qinling Orogen, is an auriferous breccia pipe developed in continental collision setting. The breccia pipe exhibits variable-sized clasts and clast mixing, which are typical of fluidized breccias. Brecciation, alteration, and gold mineralization are related to granite porphyry emplaced at c. 134 Ma. However, the relationships of the CO2-rich ore-forming fluids with the tectonic setting, structural control, granite magma evolution, and hydrothermal brecciation have not been clearly discussed. New fluid inclusion data presented in this paper indicate that the formation of the Qiyugou deposit includes: (1) an early stage defined by K-feldspar-epidote-quartz-pyrite assemblage; (2) a middle stage of quartz-polymetallic sulphides; and (3) a late stage typified by quartz-carbonate±adularia. Alteration and mineralization resulted from escape of hot (>320 °C), high-salinity (>40 wt% NaCl eq.) magmatic fluid exsolved during the final stage of crystallization of the granite porphyry. Significant pressure drop from 85–90 to 20–38 MPa resulted in breccia formation and precipitation of quartz, sulphides, and gold. A vapour phase was produced at 355–403 °C due to fluid boiling, and then was cooled and condensed under near-critical conditions to a moderately saline, warm liquid. Aqueous-carbonic inclusions were formed by trapping of heterogeneous fluids unmixed from the original H2O-CO2-NaCl fluid. Late magmatic-hydrothermal fluid mixed with meteoric fluid, and was cooled and diluted to produce lukewarm, low-salinity fluid that precipitated clear quartz and calcite with little or no mineralization. Our review of the literature suggests that the brecciation and mineralization likely coincided with sinistral transtensive faulting during 140–120 Ma. Therefore, synthesis of the foregoing geochemical information with pertinent geological information from the literature lead us to propose that fluidization and seismic pumping were important in the breccia formation and associated gold mineralization at Qiyugou. [ABSTRACT FROM AUTHOR]

• The cotton cytoplasmic subgroup gene GhHSP70-26 is transcribed in response to polyethylene glycol and abscisic acid treatment and salt, cold, and heat stress. • Overexpression of the GhHSP70-26 gene in tobacco and silencing of the GhHSP70-26 gene in cotton showed that the GhHSP70-26 gene can improve plant tolerance to drought stress. • GhbZIP43 and GhHSF8 bind to cis -acting ABREs and HSEs, respectively, to regulate the transcription of GhHSP70-26 , and the GhHSP70-26 protein interacts with the GhAPX2 protein. The 70-kDa heat shock protein (HSP70) is a molecular chaperone that plays an important role in the response of plants to abiotic stress, but the function and molecular mechanism of HSP70 in the cotton drought stress response are unclear. In this study, the HSP70-encoding gene GhHSP70-26 , which belongs to the cytoplasmic HSP70 subgroup, was cloned from upland cotton (Gossypium hirsutum L.). The transcript level of GhHSP70-26 in cotton leaves was higher than that in cotton stems and roots. GhHSP70-26 was found to respond at the transcriptional level to polyethylene glycol (PEG) and abscisic acid (ABA) treatment and to cold, salt, and heat stress, and its transcript level was positively correlated with the drought resistance of different cotton varieties. Heterologous overexpression of the GhHSP70-26 gene improved the drought resistance of transgenic tobacco compared with that of wild-type (WT) tobacco, and the transgenic tobacco plants were characterized by low leaf wilting, high survival, low leaf water loss, increased root length and high chlorophyll content. Moreover, the transgenic tobacco plants overexpressing GhHSP70-26 had higher proline contents, higher superoxide dismutase (SOD) and peroxidase (POD) enzyme activities, and lower malondialdehyde (MDA) and reactive oxygen species (ROS) contents than the WT tobacco plants. The transcript levels of the stress response-related genes NtLEA , NtERD10D , NtPOD , NtSOD , and NtNCED3-1 in transgenic tobacco overexpressing GhHSP70-26 were significantly higher than those in WT tobacco. In contrast, under drought stress, unlike the results obtained with the pTRV2 empty vector (EV)-transformed and WT cotton plants, the use of virus-induced gene silencing (VIGS) technology to silence the GhHSP70-26 gene in cotton resulted in plants with severely wilted leaves, an increased water loss rate, a higher MDA content, and higher relative electrical conductivity (REC). Furthermore, yeast one-hybrid assays showed that GhbZIP43 and GhHSF8 bind to ABA-responsive elements (ABREs) and heat shock elements (HSEs) in the GhHSP70-26 promoter, respectively. Moreover, yeast two-hybrid, bimolecular fluorescence complementation and luciferase complementation assays showed that the GhHSP70-26 protein interacts with the ascorbate peroxidase (APX) GhAPX2 protein. These results indicate that by reducing the degrees of cell membrane damage and cellular damage caused by ROS stress, the GhHSP70-26 protein plays a positive role in the response of plants to drought stress. [ABSTRACT FROM AUTHOR]

Two class I family teosinte branched1/cycloidea/proliferating cell factor1 (TCP) proteins from allotetraploid cotton are involved in cotton fiber cell differentiation and elongation and root hair development. However, the biological function of most class II TCP proteins is unclear. This study sought to reveal the characteristics and functions of the sea-island cotton class II TCP gene GbTCP4 by biochemical, genetic, and molecular biology methods. GbTCP4 protein localizes to nuclei, binding two types of TCP-binding cis-acting elements, including the one in its promoter. Expression pattern analysis revealed that GbTCP4 is widely expressed in tissues, with the highest level in flowers. GbTCP4 is expressed at different fiber development stages and has high transcription in fibers beginning at 5 days post anthesis (DPA). GbTCP4 overexpression increases primary root hair length and density and leaf and stem trichomes in transgenic Arabidopsis relative to wild-type plants (WT). GbTCP4 binds directly to the CAPRICE (CPC) promoter, increasing CPC transcript levels in roots and reducing them in leaves. Compared with WT plants, lignin content in the stems of transgenic Arabidopsis overexpressing GbTCP4 increased, and AtCAD5 gene transcript levels increased. These results suggest that GbTCP4 regulates trichome formation and root hair development in Arabidopsis and may be a candidate gene for regulating cotton fiber elongation. [ABSTRACT FROM AUTHOR]

Abstract Drought is the most serious meteorological disaster affecting wheat production. Members of the R2R3-MYB gene subfamily play a crucial role in the regulation of the wheat drought stress response. In this study, the function of polyethylene glycol (PEG)-induced expression of the wheat R2R3-MYB gene TaSIM in response to drought stress was characterized. β-Glucuronidase (GUS) histochemical staining revealed that the TaSIM promoter can drive the expression of the GUS gene in the flowers, roots, stems and rosette leaves. Moreover, TaSIM was expressed in the stamens, pistils, roots, stems and leaves of wheat. The TaSIM promoter contains a known stress-responsive cis -acting element and is inducible by stress, PEG and abscisic acid (ABA). Under drought stress, compared with wild-type (WT) Arabidopsis , transgenic Arabidopsis overexpressing TaSIM presented significantly lower leaf water loss rates and increased survival. Moreover, the content of soluble sugars and proline and the expression of stress-related genes (RD29A and RD22) in transgenic Arabidopsis overexpressing TaSIM were higher than those in WT Arabidopsis under drought stress. Our results indicate that TaSIM plays a positive role in the drought stress response and can be used as a candidate gene for the genetic engineering of wheat drought resistance. Highlights • TaSIM is expressed in the stamens, pistils, roots, stems and leaves of wheat. • ABRE and CRT/DRE cis -acting elements are present in the TaSIM promoter, which is induced by stress, PEG and ABA. • Transgenic Arabidopsis overexpressing TaSIM has a low water loss rate, accumulates relatively high contents of soluble sugars and proline, and expresses RD22 and RD29A , thereby enhancing Arabidopsis tolerance to drought stress. [ABSTRACT FROM AUTHOR]

Highlights • Unique geochemistry of high mature reservoir pyrobitumens in Lower Cambrian. • Parallel application and cross-validation of REE, carbon isotopes and biomarkers. • Multiproxy study of oceanographic conditions in the Lower Cambrian. • Variations of inorganic element ratios in probitumens along migration pathways. • A potential means through analysis of bitumen to study paleo-oil reservoirs. Abstract The Moxi–Gaoshiti Bulge of the Sichuan Basin in southwestern China is unique because it provides insights into the geochemistry of Lower Cambrian reservoir bitumens and their geological significance for paleo-oil reservoirs. Analyses of biomarkers, carbon isotopes, trace elements (TE) and rare earth elements (REE) were conducted on reservoir bitumens and the associated source rocks to constrain sedimentary environments and bitumen/paleo-oil sources. Based on biomarkers, carbon isotopes, TE ratios and REE distribution patterns, both of the Cambrian Qiongzhisi (Є 1 q) and Sinian Dengying (Z 2 dn) source rocks can be hydrocarbon sources for the Cambrian Longwangmiao (Є 1 l) bitumens in the MG Bulge (Lower Cambrian Doushantuo Formation not discussed here). Abundant n -alkanes relative to isoprenoids, significant C 21 and C 22 steranes, predominance of dibenzothiophene (DBT), and low ratios of biomarkers, such as Pr/Ph, DBT/P, C 22 TT/C 21 TT and C 35 H(22S)/C 34 H(22S) indicated that the source rock was characterized as shale from an overall highly reducing marine depositional environment. The average δ13C values from the compositions of the solid bitumens show an abnormal order: saturate hydrocarbons < asphaltenes < N-S-O compounds < aromatic hydrocarbons, suggesting that high temperature might affect the normal fractionation among different organic matter fractions. The reservoir bitumens are enriched in Mo, Tl, Pb and Ba, strongly depleted in Bi Compared to PAAS, and mostly well correlated in the REE distribution patterns. In the primary migration pathways suggested by the DBT concentration, the parameters ∑REE and Zr/Cu show an overall increase, and the ratios V/Ni, Ni/Co, V/Zr and V/Cr have decreasing trends. The comprehensive analyses of molecular biomarkers, carbon isotopes, TE and REE in pyrobitumens of the highly mature reservoirs in this study suggest a potential means to study paleo-oil reservoirs, and can thus provide valuable information for deep oil and gas exploration in Precambrian – Lower Cambrian petroleum systems. [ABSTRACT FROM AUTHOR]

The Moxi–Gaoshiti (MG) Bulge of the Sichuan Basin in southwestern China is unique because of its enormous gas field in old Cambrian and Proterozoic marine strata, where oils in carbonate reservoirs have been nearly completely cracked to solid bitumen and natural gas because of high to post-mature thermal maturity levels. Numerous solid bitumen-bearing dolomites obtained from boreholes in the MG Bulge provide an ideal opportunity to trace the major filling orientations for the Lower Cambrian paleo-oil reservoirs. Biomarker analysis was conducted on solid bitumens through quantitative detection with gas chromatography–mass spectrometry. Results show that all solid bitumen samples in the MG Bulge exhibit similar compositions of molecular markers, thereby implying that they belong to the same oil population and that paleo-oils should be derived from the same source kitchen/bed. Low pristane/phytane and dibenzothiophene (DBT)/phenanthrene ratios, as well as the predominance of DBT among DBT, dibenzofuran, and fluorene, are observed in the solid bitumen samples, which suggest that related paleo-oil reservoirs likely originated from a highly reducing marine shale environment. All isopleth maps of the DBT concentrations, 4-methylDBT/1-methylDBT, 4,6-dimethylDBT/(1,4 + 1,6)-dimethylDBT (DMDBT), and (2,6 + 3,6)-DMDBT/(1,4 + 1,6)-DMDBT ratios consistently indicate that the overall orientation of oil migration in the MG Bulge is primarily from the west-to-east direction, with the strongest filling point located at approximately the Mx12 well. The north-to-west direction is an additional filling orientation. These indicators show that those paleo-oils that had been cracked to pyrobitumens mainly originated from a source kitchen in the western part of the MG Bulge. A hydrocarbon source kitchen in the northern part of the MG Bulge may also have developed but further research on this is needed. The recognition of these solid bitumen molecular signatures, particularly the consistent results using DBT concentrations and alkyl DBT thermal maturity indicators, suggests a potential approach that can be applied to the study of paleo-oil reservoirs. [ABSTRACT FROM AUTHOR]

MicroRNAs (miRNAs) have important functions in the plant salt stress response. However, the functions of nonconserved miRNAs in soybean salt stress adaptation remain unclear. In this study, the soybean nonconserved miRNA gma-miR4359b and its target mRNA F-box gene GmFBX193 were functionally identified in response to salt stress. gma-miR4359b responded to salt stress in soybean hairy roots, stems, and leaves. Under salt stress, the root length ratio, root surface area ratio, root volume ratio, root tip number, survival rate, chlorophyll content, soluble sugar content, proline content, superoxide dismutase activity, and peroxidase enzyme activity of soybean hairy roots overexpressing gma-miR4359b (MIR4359b) were increased compared to those of the K599 (control) soybean hairy roots, while the relative electrolyte leakage and malondialdehyde content of the MIR4359b soybean hairy roots decreased. In contrast, soybean hairy roots in which target mimicry (MIM4359b) and short tandem target mimic (STTM4359b) inhibited gma-miR4359b exhibited a salt-sensitive phenotype. The transcription level of GmFBX193 was decreased in MIR4359b soybean hairy roots, while the transcription level of GmFBX193 was increased in MIM4359b and STTM4359b soybean hairy roots. GmFBX193 responded to salt stress in soybean roots, and GmFBX193 was identified as a nuclear-localized protein. Under salt stress, soybean hairy roots overexpressing GmFBX193 had a similar phenotype to MIM4359b and STTM4359b soybean hairy roots. Compared with K599 (control) soybean hairy roots, MIR4359b soybean hairy roots had 172 differentially expressed genes (DEGs), and MIM4359b soybean hairy roots had 2129 DEGs. Some known stress-related transcription factors were included among the DEGs. Taken together, these results suggest that gma-miR4359b plays a positive role in the soybean salt stress response by negatively regulating GmFBX193. • The nonconserved soybean miRNA gma-miR4359b and its target mRNA F-box gene GmFBX193 responded to salt stress. gma-miR4359b positively regulates the soybean response to salt stress by targeting GmFBX193. • gma-miR4359b is a positive regulator of salt tolerance in soybean. • GmFBX193 negatively regulates soybean tolerance to salt stress. • Transcriptome sequencing showed that gma-miR4359b could affect the transcription levels of some transcription factors related to the salt stress response. [ABSTRACT FROM AUTHOR]

Variations in biomarker concentrations, including tricyclic terpanes, tetracyclic terpanes, pentacyclic triterpanes, steranes, methylphenanthrenes and triaromatic steranes, were investigated at two different pressures (0.1 and 20 MPa) in multiple laboratory simulation experiments of oil-to-gas cracking. The low-maturity non-marine oil samples used in the study are from the Paleogene Shahejie Formation in the Dongying Depression, Bohai Bay Basin, eastern China. The oils were pyrolyzed to gas at elevated temperatures (300–650 °C) in an autoclave. The oil residue was sampled and analyzed at 50 °C temperature intervals. The results show that changes in biomarker concentrations are controlled mainly by temperature, while high pressures exert non-linear suppression effects on these variations. There appear to be different evolution regimes based on biomarker cracking and generation rates in the primary (400–500 °C for 0.1 MPa and 450–550 °C for 20 MPa) and secondary (500–650 °C for 0.1 MPa and 550–650 °C for 20 MPa) oil-to-gas cracking stages. Generally, the biomarker ratio differences are considerable in the early primary oil-to-gas cracking stage but decrease substantially in the later primary oil-to-gas cracking stage. The differences remain stable at high temperatures in the secondary oil-to-gas cracking stage. These oil-to-gas pyrolysis experiments reveal the characteristics of biomarker ratios, which are quite different from their distribution within the conventional “liquid window” at moderate maturity level. They provide new insights on oil biomarker maturity parameters under high temperatures and the change of oil and gas in deep buried basins. [ABSTRACT FROM AUTHOR]

TCP transcription factors play important regulatory roles in plant growth and development; however, their function in response to salt and drought stress in sea-island cotton (Gossypium barbadense) is unknown. Here, GbTCP4 expression was induced by abscisic acid (ABA), drought, and NaCl treatments. Under drought stress, compared to wild-type (WT) Arabidopsis , transgenic GbTCP4 -overexpressing Arabidopsis showed increased seed germination rate, root length and survival rate; additionally, it was ABA-insensitive at the germination stage but ABA-sensitive at the seedling stage, showing reduced stomatal opening and ABA enrichment. Under salt stress, compared to WT Arabidopsis , transgenic GbTCP4- overexpressing Arabidopsis showed greater root length, survival rate, and SPAD value and lower malondialdehyde (MDA) content. Conversely, under drought or salt stress, virus-induced gene-silenced GbTCP4 cotton showed decreased root length, area and volume and increased MDA content and sensitivity to drought and salt stress compared with control cotton. RNA-seq and quantitative real-time PCR analyses showed that GbTCP4 affected the transcription levels of genes across multiple abiotic stress-related metabolic pathways. Furthermore, GbTCP4 activated the transcription of GbUVR8 and GbbHLH130 by binding to their promoters. These results suggest that GbTCP4 positively regulates drought and salt stress responses and is a suitable candidate gene for improving plant drought and salt tolerance. • The sea-island cotton class II TCP gene GbTCP4 is induced by drought, salt, and ABA treatments. • Overexpression of GbTCP4 in Arabidopsis and silencing of GbTCP4 in cotton indicated that GbTCP4 is a positive regulator of drought and salt stress. • GbTCP4 regulates abiotic stress responses in an ABA-dependent manner. • The GbTCP4 transcription factor can affect the expression of key genes in multiple stress-related metabolic pathways. [ABSTRACT FROM AUTHOR]

• The GmNF-YA10 gene encodes an NF-YA transcription factor located in the nucleus that responds to PEG and ABA treatment at the transcription level. • Overexpression of the GmNF-YA10 gene increases the drought resistance of transgenic Arabidopsis by accumulating osmotic substances, slowing membrane lipid peroxidation, enhancing photosynthesis, regulating ABA-mediated stomatal closure, reducing the leaf water loss rate, and affecting the transcript levels of stress-related genes. • GmNF-YA10 gene participates in Arabidopsis response to drought stress through two pathways, ABA-dependent and ABA-independent. Nuclear factor (NF)-Y is composed of three subunits, NF-YA, NF-YB and NF-YC, and plays important roles in the regulation of plant abiotic stress response gene expression. However, the function of individual soybean NF-YA proteins in response to drought stress is unclear. In this study, the soybean NF-YA subunit gene GmNF-YA10 was cloned, and its function in response to drought stress was identified. GmNF-YA10 is broadly expressed in soybean tissues and is specifically located in the nucleus. In soybean roots, the transcription level of the GmNF-YA10 gene was induced by polyethylene glycol (PEG)-simulated drought stress and abscisic acid (ABA) treatment. Under mannitol stress, the germination rate of transgenic Arabidopsis overexpressing GmNF-YA10 was higher than that of wild-type (WT) Arabidopsis. After drought stress, the survival rate, relative water content, ABA content, proline content and chlorophyll content of transgenic Arabidopsis overexpressing GmNF-YA10 were higher than those of WT Arabidopsis while the rate of water loss and the contents of malondialdehyde and sucrose were lower than those of WT Arabidopsis , indicating that transgenic Arabidopsis overexpressing GmNF-YA10 has better drought resistance than WT Arabidopsis. Under the ABA treatment, the root length of transgenic Arabidopsis overexpressing GmNF-YA10 was shorter than that of WT Arabidopsis and the degree of stomatal closure was greater than that of WT Arabidopsis , indicating that transgenic Arabidopsis overexpressing GmNF-YA10 was more sensitive to ABA at the post-germination stage. Transcriptome sequencing and real-time quantitative PCR analysis showed that GmNF-YA10 affected the expression of both ABA-dependent and ABA-independent signalling pathway genes. These results indicate that GmNF-YA10 significantly improves the drought resistance of transgenic Arabidopsis through ABA-dependent and ABA-independent signal transduction pathways. [ABSTRACT FROM AUTHOR]

• The GbTCP5 gene encodes a sea-island cotton class II TCP CIN subclass transcription factor. • The GbTCP5 transcription factor is located in the nucleus, has transcriptional activation activity, and can bind to TCP II cis -acting elements. • Heterologous overexpression of the GbTCP5 gene increased root hair length, root hair and stem trichome density, and stem lignin content in transgenic Arabidopsis. • GbTCP5 binds the promoters of the GL3 , EGL3 , CPC , MYB46 , LBD30 , CesA4 , VND7 , CCOMT1 , and CAD5 genes to upregulate their expression. Teosinte branched1/cycloidea/proliferating cell factor1 (TCP) is a plant-specific protein family member involved in plant growth and development. However, the functions of most members of the cotton TCP family are unknown. In this study, the GbTCP5 gene encodes a sea-island cotton class II TCP CIN subclass transcription factor. The GbTCP5 transcription factor is located in the nucleus, has transcriptional activation activity, and can bind to TCP II cis -acting elements. GbTCP5 was widely expressed in tissues with the highest transcript level in the calyx. GbTCP5 is expressed at different developmental stages of the fiber and has significantly high transcriptional level expression in the fibers at 20, 30 and 35 days post anthesis (DPA). Heterologous overexpression of the GbTCP5 gene increased root hair length, root hair and stem trichome density, and stem lignin content in transgenic Arabidopsis compared to the wild type (WT). GbTCP5 binds the promoters of the GL3 , EGL3 , CPC , MYB46 , LBD30 , CesA4 , VND7 , CCOMT1 , and CAD5 genes to upregulate their expression. Moreover, the homologous genes of these genes are expressed in the fibers of different developmental stages of the sea-island cotton fiber. These results indicate that GbTCP5 regulates root hair development and secondary wall formation in Arabidopsis and may be a candidate gene for improving cotton fiber quality. [ABSTRACT FROM AUTHOR]

• GmFBX176 encodes a nuclear-localized F-box protein that responds to PEG treatment, ABA treatment, and salt stress at the transcriptional level. • Stress tolerance analysis of heterologous GmFBX176-overexpressing Arabidopsis revealed that GmFBX176 is a negative regulatory protein that improves tolerance to drought and salt stress. • GmFBX176-overexpressing Arabidopsis displayed reduced sensitivity to ABA. • Constitutive heterologous overexpression of the GmFBX176 gene affects stress-related physiological indicators and the transcript levels of stress response genes in transgenic Arabidopsis. As key components of the E3 ubiquitin ligase in the Skp1/Cullin or CDC53/F-box (SCF) complex, F-box proteins are involved in plant abiotic stress responses. However, the functions of F-box proteins in soybean in response to abiotic stress remain unclear. In this study, the soybean F-box protein-encoding gene GmFBX176 was cloned and functionally analyzed. GmFBX176 localized to the nucleus, was widely expressed in tissues (with the highest level in the roots), and responded to polyethylene glycol (PEG) treatment, abscisic acid (ABA) treatment, and salt stress at the transcriptional level. GmFBX176 -overexpressing Arabidopsis had lower survival rates; faster water loss rates; lower proline, sucrose and chlorophyll contents; greater malondialdehyde (MDA) contents; greater relative electrical conductivity (REC); and greater drought stress sensitivity than did wild-type (WT) Arabidopsis. Moreover, GmFBX176 -overexpressing Arabidopsis had lower survival rates, lower chlorophyll content, lower superoxide dismutase (SOD) activity, greater sensitivity to salt stress, longer roots, greater stomatal opening rates, and lower sensitivity to ABA than did WT Arabidopsis. Transcriptome sequencing and quantitative real-time PCR (qPCR) analyses revealed that GmFBX176 affects the transcript levels of stress response genes. These results indicate that GmFBX176 regulates ABA-mediated responses to drought and salt stress. [ABSTRACT FROM AUTHOR]

In plant cells, vacuolar H + -ATPases (V-ATPases) are responsible for deacidification of the cytosol and energisation of the secondary transport processes across the tonoplast. A number of V-ATPase subunit genes have been demonstrated to be involved in the regulation of the plant response to water deficit. However, there are no reports on the role of V-ATPase subunit A (VHA-A) in dehydration tolerance of cotton. In this study, cotton GhVHA-A gene was functionally characterized, especially with regard to its role in dehydration stress tolerance. Expression analysis showed that GhVHA-A was differentially expressed in various cotton organs and was induced by dehydration, low temperature, high salinity, and abscisic acid treatment in leaves. We also report that GhVHA-A improve dehydration tolerance in transgenic tobacco and cotton. Virus-induced gene silencing of GhVHA-A decreased the tolerance of cotton plantlets to dehydration stress. Silencing GhVHA-A decreased chlorophyll content and antioxidant enzyme activities and increased malondialdehyde (MDA) content in cotton under dehydration stress. However, transgenic tobacco expressing GhVHA-A exhibited enhanced dehydration resistance, resulting in reduced leaf water loss, higher average root length, and lower MDA levels under dehydration stress. Meanwhile, overexpression of GhVHA-A in tobacco conferred water deficit tolerance by enhancing osmotic adjustment (proline) and the activities of the antioxidant enzymes superoxide dismutase and peroxidase, thereby enhancing reactive oxygen species detoxification. These results suggest that GhVHA-A plays an important role in conferring resistance to dehydration stress. Our results have identified GhVHA-A as a candidate gene for improving dehydration tolerance in plants.