27 results on '"Moore MW"'
Search Results
2. Abstract P5-03-10: Development of a novel HER2 testing strategy, using image-based cell-sorting to isolate pure cell populations from FFPE upstream of FISH
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Gerber, A, primary, Konig, L, additional, Millner, L, additional, Strotoman, L, additional, Khurana, A, additional, Kasimir-Bauer, S, additional, Moore, MW, additional, Cotter, PD, additional, and Bischoff, F, additional
- Published
- 2017
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3. Consonant Age of Acquisition Reveals Nonlinear Effects in Nonword Repetition Performance.
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Moore MW, Rambo-Hernandez KE, and McDonald TL
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- Humans, Language Tests, Language, Memory, Long-Term, Phonetics, Language Development, Linguistics
- Abstract
Recent work has shown significant sublexical effects of long-term memory in nonword repetition (NWR) using a dichotomous consonant age of acquisition (CAoA) variable (Moore, 2018; Moore, Fiez, and Tompkins, 2017). Performance consistently decreased when stimuli comprised consonants acquired later versus earlier in speech development. To address potential confounds related to stimulus design and linearity, the purpose of this study was to test whether performance decreases as the CAoA value of stimuli increases in various linguistic tasks using a continuous CAoA variable. Thirty-one college students completed NWR and other linguistic tasks in which the stimuli varied in average CAoA values. Data were analyzed using multilevel modeling. After accounting for phonotactic probability, CAoA was a statistically significant predictor of performance across the models reported. The relationship was more complex in some of the models in which CAoA showed a statistically significant nonlinear relationship with the outcome measure. Results from this study support previous work showing that CAoA affects performance on NWR and other linguistic tasks that vary in their memory, auditory perceptual, and articulatory demands. Importantly, this line of work was extended here by demonstrating that the CAoA effect is robust across novel stimulus sets and study designs, and may be more complex than previously understood when using a dichotomous CAoA variable. Quadratic results suggest that the CAoA variable has a differential effect on performance for low to moderate CAoA values, but for higher CAoA values the effect is similarly negative. The nonlinear relationship between CAoA and measures of speed and accuracy on some of the tasks warrants further study into the complex relationship between various predictive factors that contribute to language performance., (© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
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- 2022
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4. Spectral degradation influences phonological memory in typically hearing adults.
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Ross CA and Moore MW
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- Adult, Hearing, Humans, Language, Language Development, Language Tests, Memory, Short-Term, Deafness, Phonetics
- Abstract
Phonological processing is a fundamental component of language, can be impaired in people with hearing loss, and involves several confounded subprocesses. The purpose of this study was to systematically examine several phonological subprocesses - i.e., the spectral quality of auditory input and phonological short-term and long-term memory - in order to better understand how they interact with one another in basic linguistic tasks. Using an experimental, within-subjects design, 30 typically-hearing adults completed nonword repetition (NWR) and auditory lexical decision (ALD) tasks varying in spectral quality (normal versus spectrally-degraded), consonant age of acquisition (CAoA; i.e. early-acquired versus late-acquired consonants), syllable length (NWR task), and lexical status (ALD task). In NWR, spectral degradation muted the word length effect, though performance differed depending on how familiar participants were with the degraded stimuli. ALD findings showed that the magnitude of the degradation effect varied between stimuli comprising early-acquired versus late-acquired consonants. The robust effect of spectral degradation on phonological short-term and long-term memory provides a model of the interactive nature of these subprocesses in typical adults. Future work with populations with hearing loss can provide a comparison to help understand how the typical and clinical phonological systems differ.
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- 2022
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5. Bronze age stone flaking at Saruq al-Hadid, Dubai, southeastern Arabia.
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Moore MW, Weeks L, Cable C, Al-Ali Y, Boraik M, and Zein H
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- Animals, Arabia, Archaeology, Technology, Weapons, Actinobacteria, Hominidae
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Excavations at Saruq al-Hadid, Dubai, UAE, discovered a stone tool technology with backed microliths dating to the Wadi Suq period and Late Bronze Age (ca. 1750-1300 BCE). The stone technology is a contemporary with metal production in the region, and the assemblage was recovered from a thick bone midden deposit at this multi-period site on the edge of the Rub' al-Khali Desert. Small cobbles of chert were imported to the site and were reduced into flakes by hard-hammer percussion. Cores were frequently rotated during knapping and the reduction strategy was ad hoc, lacking hierarchical reduction stages. Flake tools were used as-is or modified by retouching. Some flakes were selected for backing into geometric microliths, and backing techniques often reflected high levels of stoneworking skill to produce stylised scalene shapes. A review of contemporary archaeological evidence, and the context of the Saruq al-Hadid assemblage, suggest that microliths may have been made as stone armatures for arrows despite the contemporary use of copper-based arrowheads., Competing Interests: The authors have declared that no competing interests exist.
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- 2022
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6. Phonetic Effects in Child and Adult Word Segmentation.
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Katz J and Moore MW
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- Adult, Child, Child, Preschool, Humans, Language, Learning, Verbal Learning, Language Development, Phonetics
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Purpose The aim of the study was to investigate the effects of specific acoustic patterns on word learning and segmentation in 8- to 11-year-old children and in college students. Method Twenty-two children (ages 8;2-11;4 [years;months]) and 36 college students listened to synthesized "utterances" in artificial languages consisting of six iterated "words," which followed either a phonetically natural lenition-fortition pattern or an unnatural (cross-linguistically unattested) antilenition pattern. A two-alternative forced-choice task tested whether they could discriminate between occurring and nonoccurring sequences. Participants were exposed to both languages, counterbalanced for order across subjects, in sessions spaced at least 1 month apart. Results Children showed little evidence for learning in either the phonetically natural or unnatural condition nor evidence of differences in learning across the two conditions. Adults showed the predicted (and previously attested) interaction between learning and phonetic condition: The phonetically natural language was learned better. The adults also showed a strong effect of session: Subjects performed much worse during the second session than the first. Conclusions School-age children not only failed to demonstrate the phonetic asymmetry demonstrated by adults in previous studies but also failed to show strong evidence for any learning at all. The fact that the phonetic asymmetry (and general learning effect) was replicated with adults suggests that the child result is not due to inadequate stimuli or procedures. The strong carryover effect for adults also suggests that they retain knowledge about the sound patterns of an artificial language for over a month, longer than has been reported in laboratory studies of purely phonetic/phonological learning. Supplemental Material https://doi.org/10.23641/asha.13641284.
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- 2021
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7. Macrophage-derived netrin-1 drives adrenergic nerve-associated lung fibrosis.
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Gao R, Peng X, Perry C, Sun H, Ntokou A, Ryu C, Gomez JL, Reeves BC, Walia A, Kaminski N, Neumark N, Ishikawa G, Black KE, Hariri LP, Moore MW, Gulati M, Homer RJ, Greif DM, Eltzschig HK, and Herzog EL
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- Animals, Bleomycin adverse effects, Bleomycin pharmacology, Female, Lung pathology, Macrophages pathology, Male, Mice, Mice, Transgenic, Netrin-1 genetics, Norepinephrine genetics, Norepinephrine metabolism, Pulmonary Fibrosis chemically induced, Pulmonary Fibrosis genetics, Pulmonary Fibrosis pathology, Lung innervation, Lung metabolism, Macrophages metabolism, Netrin-1 metabolism, Pulmonary Fibrosis metabolism
- Abstract
Fibrosis is a macrophage-driven process of uncontrolled extracellular matrix accumulation. Neuronal guidance proteins such as netrin-1 promote inflammatory scarring. We found that macrophage-derived netrin-1 stimulates fibrosis through its neuronal guidance functions. In mice, fibrosis due to inhaled bleomycin engendered netrin-1-expressing macrophages and fibroblasts, remodeled adrenergic nerves, and augmented noradrenaline. Cell-specific knockout mice showed that collagen accumulation, fibrotic histology, and nerve-associated endpoints required netrin-1 of macrophage but not fibroblast origin. Adrenergic denervation; haploinsufficiency of netrin-1's receptor, deleted in colorectal carcinoma; and therapeutic α1 adrenoreceptor antagonism improved collagen content and histology. An idiopathic pulmonary fibrosis (IPF) lung microarray data set showed increased netrin-1 expression. IPF lung tissues were enriched for netrin-1+ macrophages and noradrenaline. A longitudinal IPF cohort showed improved survival in patients prescribed α1 adrenoreceptor blockade. This work showed that macrophages stimulate lung fibrosis via netrin-1-driven adrenergic processes and introduced α1 blockers as a potentially new fibrotic therapy.
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- 2021
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8. Perceptual Learning and Production Practice Differentially Affect How Children Produce Novel Words.
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Richtsmeier PT and Moore MW
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- Learning, Linguistics, Phonetics, Speech Production Measurement, Speech, Speech Perception
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Purpose Perceptual learning and production practice are basic mechanisms that children depend on to acquire adult levels of speech accuracy. In this study, we examined perceptual learning and production practice as they contributed to changes in speech accuracy in 3- and 4-year-old children. Our primary focus was manipulating the order of perceptual learning and production practice to better understand when and how these learning mechanisms interact. Method Sixty-five typically developing children between the ages of 3 and 4 years were included in the study. Children were asked to produce CVCCVC (C = consonant, V = vowel) nonwords like /bozjəm/ and /tʌvtʃəp/ that were described as the names of make-believe animals. All children completed two separate experimental blocks: a control block in which participants heard each nonword once and repeated it, and a test block in which the perceptual input frequency of each nonword varied between 1 and 10. Half of the participants completed a control-test order; half completed a test-control order. Results Greater accuracy was observed for nonwords produced in the second experimental block, reflecting a production practice effect. Perceptual learning resulted in greater accuracy during the test for nonwords that participants heard 3 times or more. However, perceptual learning did not carry over to control productions in the test-control design, suggesting that it reflects a kind of temporary priming. Finally, a post hoc analysis suggested that the size of the production practice effect depended on the age of acquisition of the consonants that comprised the nonwords. Conclusions The study provides new details about how perceptual learning and production practice interact with each other and with phonological aspects of the nonwords, resulting in complex effects on speech accuracy and learning of form-referent pairs. These findings may ultimately help speech-language pathologists maximize their clients' improvement in therapy. Supplemental Material https://doi.org/10.23641/asha.12971411.
- Published
- 2020
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9. Analytical performance evaluation of a commercial next generation sequencing liquid biopsy platform using plasma ctDNA, reference standards, and synthetic serial dilution samples derived from normal plasma.
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Verma S, Moore MW, Ringler R, Ghosal A, Horvath K, Naef T, Anvari S, Cotter PD, and Gunn S
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- Cell-Free Nucleic Acids blood, Cell-Free Nucleic Acids genetics, Circulating Tumor DNA genetics, Humans, Liquid Biopsy, Mutation genetics, Neoplasms genetics, Biomarkers, Tumor blood, Circulating Tumor DNA blood, High-Throughput Nucleotide Sequencing, Neoplasms blood
- Abstract
Background: Circulating tumor (ct) DNA assays performed in clinical laboratories provide tumor biomarker testing support for biopharmaceutical clinical trials. Yet it is neither practical nor economically feasible for many of these clinical laboratories to internally develop their own liquid biopsy assay. Commercially available ctDNA kits are a potential solution for laboratories seeking to incorporate liquid biopsy into their test menus. However, the scarcity of characterized patient samples and cost of purchasing validation reference standards creates a barrier to entry. In the current study, we evaluated the analytical performance of the AVENIO ctDNA liquid biopsy platform (Roche Sequencing Solutions) for use in our clinical laboratory., Method: Intra-laboratory performance evaluation of AVENIO ctDNA Targeted, Expanded, and Surveillance kits (Research Use Only) was performed according to College of American Pathologists (CAP) guidelines for the validation of targeted next generation sequencing assays using purchased reference standards, de-identified human plasma cell-free (cf) DNA samples, and contrived samples derived from commercially purchased normal and cancer human plasma. All samples were sequenced at read depths relevant to clinical settings using the NextSeq High Output kit (Illumina)., Results: At the clinically relevant read depth, Avenio ctDNA kits demonstrated 100% sensitivity in detecting single nucleotide variants (SNVs) at ≥0.5% allele frequency (AF) and 50% sensitivity in detecting SNVs at 0.1% AF using 20-40 ng sample input amount. The assay integrated seamlessly into our laboratory's NGS workflow with input DNA mass, target allele frequency (TAF), multiplexing, and number of reads optimized to support a high-throughput assay appropriate for biopharmaceutical trials., Conclusions: Our study demonstrates that AVENIO ctDNA liquid biopsy platform provides a viable alternative for efficient incorporation of liquid biopsy assays into the clinical laboratory for detecting somatic alterations as low as 0.5%. Accurate detection of variants lower than 0.5% could potentially be achieved by deeper sequencing when clinically indicated and economically feasible.
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- 2020
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10. Archaeology and art in context: Excavations at the Gunu Site Complex, Northwest Kimberley, Western Australia.
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Moore MW, Westaway K, Ross J, Newman K, Perston Y, Huntley J, Keats S, and Morwood MJ
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- Caves, Geography, Imaging, Three-Dimensional, Western Australia, Archaeology, Art
- Abstract
The Kimberley region of Western Australia is one of the largest and most diverse rock art provenances in the world, with a complex stylistic sequence spanning at least 16 ka, culminating in the modern art-making of the Wunumbal people. The Gunu Site Complex, in the remote Mitchell River region of the northwest Kimberley, is one of many local expressions of the Kimberley rock art sequence. Here we report excavations at two sites in this complex: Gunu Rock, a sand sheet adjacent to rock art panels; and Gunu Cave, a floor deposit within an extensive rockshelter. Excavations at Gunu Rock provide evidence for two phases of occupation, the first from 7-8 to 2.7 ka, and the second from 1064 cal BP. Excavations at Gunu Rock provide evidence for occupation from the end of the second phase to the recent past. Stone for tools in the early phase were procured from a variety of sources, but quartz crystal reduction dominated the second occupation phase. Small quartz crystals were reduced by freehand percussion to provide small flake tools and blanks for manufacturing small points called nguni by the Wunambal people today. Quartz crystals were prominent in historic ritual practices associated with the Wanjina belief system. Complex methods of making bifacially-thinned and pressure flaked quartzite projectile points emerged after 2.7 ka. Ochre pigments were common in both occupation phases, but evidence for occupation contemporaneous with the putative age of the oldest rock art styles was not discovered in the excavations. Our results show that developing a complete understanding of rock art production and local occupation patterns requires paired excavations inside and outside of the rockshelters that dominate the Kimberley., Competing Interests: The authors have the following interests: The Kandiwal Aboriginal Corporation, an incorporated body encompassing members of the Kandiwal community (about 45 people) provided support during field work and knowledge about sites in their country, under a research agreement with the ARC (as a Linkage Partner). Slingair and Heliwork Pty Ltd provided a discount on air travel across the northwest Kimberley under a research agreement with the ARC (as a Linkage Partner). There are no patents, products in development or marketed products to declare. This does not alter our adherence to all the PLoS One policies on sharing data and materials, as detailed online in the guide for authors.
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- 2020
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11. Last appearance of Homo erectus at Ngandong, Java, 117,000-108,000 years ago.
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Rizal Y, Westaway KE, Zaim Y, van den Bergh GD, Bettis EA 3rd, Morwood MJ, Huffman OF, Grün R, Joannes-Boyau R, Bailey RM, Sidarto, Westaway MC, Kurniawan I, Moore MW, Storey M, Aziz F, Suminto, Zhao JX, Aswan, Sipola ME, Larick R, Zonneveld JP, Scott R, Putt S, and Ciochon RL
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- Animals, Biological Evolution, Fossils, Indonesia, Leg Bones, Skull, Time Factors, Hominidae
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Homo erectus is the founding early hominin species of Island Southeast Asia, and reached Java (Indonesia) more than 1.5 million years ago
1,2 . Twelve H. erectus calvaria (skull caps) and two tibiae (lower leg bones) were discovered from a bone bed located about 20 m above the Solo River at Ngandong (Central Java) between 1931 and 19333,4 , and are of the youngest, most-advanced form of H. erectus5-8 . Despite the importance of the Ngandong fossils, the relationship between the fossils, terrace fill and ages have been heavily debated9-14 . Here, to resolve the age of the Ngandong evidence, we use Bayesian modelling of 52 radiometric age estimates to establish-to our knowledge-the first robust chronology at regional, valley and local scales. We used uranium-series dating of speleothems to constrain regional landscape evolution; luminescence,40 argon/39 argon (40 Ar/39 Ar) and uranium-series dating to constrain the sequence of terrace evolution; and applied uranium-series and uranium series-electron-spin resonance (US-ESR) dating to non-human fossils to directly date our re-excavation of Ngandong5,15 . We show that at least by 500 thousand years ago (ka) the Solo River was diverted into the Kendeng Hills, and that it formed the Solo terrace sequence between 316 and 31 ka and the Ngandong terrace between about 140 and 92 ka. Non-human fossils recovered during the re-excavation of Ngandong date to between 109 and 106 ka (uranium-series minimum)16 and 134 and 118 ka (US-ESR), with modelled ages of 117 to 108 thousand years (kyr) for the H. erectus bone bed, which accumulated during flood conditions3,17 . These results negate the extreme ages that have been proposed for the site and solidify Ngandong as the last known occurrence of this long-lived species.- Published
- 2020
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12. Multiparametric liquid biopsy analysis in metastatic prostate cancer.
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Hodara E, Morrison G, Cunha A, Zainfeld D, Xu T, Xu Y, Dempsey PW, Pagano PC, Bischoff F, Khurana A, Koo S, Ting M, Cotter PD, Moore MW, Gunn S, Usher J, Rabizadeh S, Danenberg P, Danenberg K, Carpten J, Dorff T, Quinn D, and Goldkorn A
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- Aged, Aged, 80 and over, Biomarkers, Tumor blood, Cell-Free Nucleic Acids blood, DNA Copy Number Variations, Disease Progression, Gene Expression Profiling, Humans, Male, Middle Aged, Mutation, Neoplastic Cells, Circulating, Prostatic Neoplasms genetics, Receptors, Androgen blood, Receptors, Androgen genetics, Liquid Biopsy methods, Prostatic Neoplasms blood, Prostatic Neoplasms pathology
- Abstract
Molecular profiling of prostate cancer with liquid biopsies, such as circulating tumor cells (CTCs) and cell-free nucleic acid analysis, yields informative yet distinct data sets. Additional insights may be gained by simultaneously interrogating multiple liquid biopsy components to construct a more comprehensive molecular disease profile. We conducted an initial proof-of-principle study aimed at piloting this multiparametric approach. Peripheral blood samples from men with metastatic castrate-resistant prostate cancer were analyzed simultaneously for CTC enumeration, single-cell copy number variations, CTC DNA and matched cell-free DNA mutations, and plasma cell-free RNA levels of androgen receptor (AR) and AR splice variant (ARV7). In addition, liquid biopsies were compared with matched tumor profiles when available, and a second liquid biopsy was drawn and analyzed at disease progression in a subset of patients. In this manner, multiparametric liquid biopsy profiles were successfully generated for each patient and time point, demonstrating the feasibility of this approach and highlighting shared as well as unique cancer-relevant alterations. With further refinement and validation in large cohorts, multiparametric liquid biopsies can optimally integrate disparate but clinically informative data sets and maximize their utility for molecularly directed, real-time patient management.
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- 2019
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13. The VWFA Is the Home of Orthographic Learning When Houses Are Used as Letters.
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Martin L, Durisko C, Moore MW, Coutanche MN, Chen D, and Fiez JA
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- Brain Mapping, Female, Housing, Humans, Magnetic Resonance Imaging, Male, Photic Stimulation, Temporal Lobe diagnostic imaging, Young Adult, Learning physiology, Pattern Recognition, Visual physiology, Reading, Temporal Lobe physiology
- Abstract
Learning to read specializes a portion of the left mid-fusiform cortex for printed word recognition, the putative visual word form area (VWFA). This study examined whether a VWFA specialized for English is sufficiently malleable to support learning a perceptually atypical second writing system. The study utilized an artificial orthography, HouseFont, in which house images represent English phonemes. House images elicit category-biased activation in a spatially distinct brain region, the so-called parahippocampal place area (PPA). Using house images as letters made it possible to test whether the capacity for learning a second writing system involves neural territory that supports reading in the first writing system, or neural territory tuned for the visual features of the new orthography. Twelve human adults completed two weeks of training to establish basic HouseFont reading proficiency and underwent functional neuroimaging pre and post-training. Analysis of three functionally defined regions of interest (ROIs), the VWFA, and left and right PPA, found significant pre-training versus post-training increases in response to HouseFont words only in the VWFA. Analysis of the relationship between the behavioral and neural data found that activation changes from pre-training to post-training within the VWFA predicted HouseFont reading speed. These results demonstrate that learning a new orthography utilizes neural territory previously specialized by the acquisition of a native writing system. Further, they suggest VWFA engagement is driven by orthographic functionality and not the visual characteristics of graphemes, which informs the broader debate about the nature of category-specialized areas in visual association cortex.
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- 2019
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14. Correction: A reassessment of the early archaeological record at Leang Burung 2, a Late Pleistocene rock-shelter site on the Indonesian island of Sulawesi.
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Brumm A, Hakim B, Ramli M, Aubert M, van den Bergh GD, Li B, Burhan B, Saiful AM, Siagian L, Sardi R, Jusdi A, Abdullah, Mubarak AP, Moore MW, Roberts RG, Zhao JX, McGahan D, Jones BG, Perston Y, Szabó K, Mahmud MI, Westaway K, Jatmiko, Saptomo EW, van der Kaars S, Grün R, Wood R, Dodson J, and Morwood MJ
- Abstract
[This corrects the article DOI: 10.1371/journal.pone.0193025.].
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- 2018
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15. Reference Size Matching, Whole-Genome Amplification, and Fluorescent Labeling as a Method for Chromosomal Microarray Analysis of Clinically Actionable Copy Number Alterations in Formalin-Fixed, Paraffin-Embedded Tumor Tissue.
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Gunn SR, Govender S, Sims CL, Khurana A, Koo S, Scoggin J, Moore MW, and Cotter PD
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- Cell Line, DNA genetics, Formaldehyde, Gene Deletion, Gene Dosage, Humans, PTEN Phosphohydrolase genetics, Quality Control, Receptor, ErbB-2 genetics, Reference Standards, Chromosomes, Human genetics, DNA Copy Number Variations genetics, Fluorescent Dyes chemistry, Genome, Human, Microarray Analysis standards, Neoplasms genetics, Paraffin Embedding methods, Tissue Fixation methods
- Abstract
Cancer genome copy number alterations (CNAs) assist clinicians in selecting targeted therapeutics. Solid tumor CNAs are most commonly evaluated in formalin-fixed, paraffin-embedded (FFPE) tissue by fluorescence in situ hybridization. Although fluorescence in situ hybridization is a sensitive and specific assay for interrogating preselected genomic regions, it provides no information about coexisting clinically significant copy number changes. Chromosomal microarray analysis is an alternative DNA-based method for interrogating genome-wide CNAs in solid tumors. However, DNA extracted from FFPE tumor tissue produces an essential, yet problematic, sample type. The College of American Pathologists/American Society of Clinical Oncology guidelines for optimal tumor tissue handling, published in 2007 for breast cancer and in 2016 for gastroesophageal adenocarcinomas, are lacking for other solid tumors. Thus, cold ischemia times are seldom monitored in non-breast cancer and non-gastroesophageal adenocarcinomas, and all tumor biospecimens are affected by chemical fixation. Although intended to preserve specimens for long-term storage, formalin fixation causes loss of genetic information through DNA damage. Herein, we describe a reference size matching, whole-genome amplification, and fluorescent labeling method for FFPE-derived DNA designed to improve chromosomal microarray results from suboptimal nucleic acids and salvage highly degraded samples. With this technological advance, whole-genome copy number analysis of tumor DNA can be reliably performed in the clinical laboratory for a wide variety of tissue conditions and tumor types., (Copyright © 2018 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.)
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- 2018
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16. A reassessment of the early archaeological record at Leang Burung 2, a Late Pleistocene rock-shelter site on the Indonesian island of Sulawesi.
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Brumm A, Hakim B, Ramli M, Aubert M, van den Bergh GD, Li B, Burhan B, Saiful AM, Siagian L, Sardi R, Jusdi A, Abdullah, Mubarak AP, Moore MW, Roberts RG, Zhao JX, McGahan D, Jones BG, Perston Y, Szabó K, Mahmud MI, Westaway K, Jatmiko, Saptomo EW, van der Kaars S, Grün R, Wood R, Dodson J, and Morwood MJ
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- Animals, Hominidae, Humans, Indonesia, Islands, Archaeology, Fossils, Technology
- Abstract
This paper presents a reassessment of the archaeological record at Leang Burung 2, a key early human occupation site in the Late Pleistocene of Southeast Asia. Excavated originally by Ian Glover in 1975, this limestone rock-shelter in the Maros karsts of Sulawesi, Indonesia, has long held significance in our understanding of early human dispersals into 'Wallacea', the vast zone of oceanic islands between continental Asia and Australia. We present new stratigraphic information and dating evidence from Leang Burung 2 collected during the course of our excavations at this site in 2007 and 2011-13. Our findings suggest that the classic Late Pleistocene modern human occupation sequence identified previously at Leang Burung 2, and proposed to span around 31,000 to 19,000 conventional 14C years BP (~35-24 ka cal BP), may actually represent an amalgam of reworked archaeological materials. Sources for cultural materials of mixed ages comprise breccias from the rear wall of the rock-shelter-remnants of older, eroded deposits dated to 35-23 ka cal BP-and cultural remains of early Holocene antiquity. Below the upper levels affected by the mass loss of Late Pleistocene deposits, our deep-trench excavations uncovered evidence for an earlier hominin presence at the site. These findings include fossils of now-extinct proboscideans and other 'megafauna' in stratified context, as well as a cobble-based stone artifact technology comparable to that produced by late Middle Pleistocene hominins elsewhere on Sulawesi.
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- 2018
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17. Consonant Age-of-Acquisition Effects in Nonword Repetition Are Not Articulatory in Nature.
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Moore MW, Fiez JA, and Tompkins CA
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- Adolescent, Female, Humans, Imitative Behavior, Language Tests, Male, Memory, Long-Term, Memory, Short-Term, Pattern Recognition, Visual, Reaction Time, Reading, Speech Perception, Young Adult, Language Development, Learning, Motor Skills, Phonetics, Speech
- Abstract
Purpose: Most research examining long-term-memory effects on nonword repetition (NWR) has focused on lexical-level variables. Phoneme-level variables have received little attention, although there are reasons to expect significant sublexical effects in NWR. To further understand the underlying processes of NWR, this study examined effects of sublexical long-term phonological knowledge by testing whether performance differs when the stimuli comprise consonants acquired later versus earlier in speech development., Method: Thirty (Experiment 1) and 20 (Experiment 2) college students completed tasks that investigated whether an experimental phoneme-level variable (consonant age of acquisition) similarly affects NWR and lexical-access tasks designed to vary in articulatory, auditory-perceptual, and phonological short-term-memory demands. The lexical-access tasks were performed in silence or with concurrent articulation to explore whether consonant age-of-acquisition effects arise before or after articulatory planning., Results: NWR accuracy decreased on items comprising later- versus earlier-acquired phonemes. Similar consonant age-of-acquisition effects were observed in accuracy measures of nonword reading and lexical decision performed in silence or with concurrent articulation., Conclusion: Results indicate that NWR performance is sensitive to phoneme-level phonological knowledge in long-term memory. NWR, accordingly, should not be regarded as a diagnostic tool for pure impairment of phonological short-term memory., Supplemental Materials: https://doi.org/10.23641/asha.5435137.
- Published
- 2017
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18. Can Preoperative CT Scans Be Used to Predict Facial Nerve Stimulation Following CI?
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Hatch JL, Rizk HG, Moore MW, Camposeo EE, Nguyen SA, Lambert PR, Meyer TA, and McRackan TR
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- Adult, Aged, Cochlea surgery, Cochlear Implantation methods, Facial Nerve surgery, Female, Humans, Male, Middle Aged, Retrospective Studies, Temporal Bone surgery, Tomography, X-Ray Computed, Cochlea diagnostic imaging, Cochlear Implantation adverse effects, Facial Nerve diagnostic imaging, Postoperative Complications diagnostic imaging
- Abstract
Objectives: 1) To determine the ability of preoperative computed tomography (CT) to predict facial nerve stimulation (FNS) after cochlear implantation (CI). 2) To recognize the limitations of CT in predicting FNS., Study Design: Patient control study., Setting: Tertiary care academic medical center., Subjects: Adult patients with CI from 2003 to 2015., Methods: Patients with severe FNS (n = 4) were compared with randomly selected CI patients (n = 28). Three blinded reviewers evaluated preoperative temporal bone CT scans to measure the distance from the labyrinthine segment of the facial nerve to the basal turn of the cochlea and attempted to predict whether or not the subject had FNS after CI., Results: In total, 32 CT scans were evaluated representing 49 ears that underwent CI.The distances (mm) measured from the labyrinthine segment of the facial nerve to the basal turn of the cochlea in both the axial (0.3 ± 0.3 versus 0.6 ± 0.3) and coronal (0.4 ± 0.2 versus 0.6 ± 0.2) orientation were significantly different between the two groups (p = 0.0001 and p = 0.0034) respectively. The intraclass correlation coefficient demonstrated good (K > 0.7) reviewer correlation in both the reviewers' measurements and predictions. The sensitivity, specificity, positive predictive value, and negative predictive value for preoperative CT scans to predict FNS were 38.5, 85.1, 19.2, and 93.8% respectively. The reviewers were 23% accurate in predicting FNS., Conclusion: Based on a blinded retrospective patient-control study, CT scan measurements show a significantly reduced distance between the labyrinthine facial nerve and the basal turn of the cochlea in patients with FNS. However, it is difficult to predict who will have FNS based on these measurements.
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- 2017
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19. Antifibrotic role of vascular endothelial growth factor in pulmonary fibrosis.
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Murray LA, Habiel DM, Hohmann M, Camelo A, Shang H, Zhou Y, Coelho AL, Peng X, Gulati M, Crestani B, Sleeman MA, Mustelin T, Moore MW, Ryu C, Osafo-Addo AD, Elias JA, Lee CG, Hu B, Herazo-Maya JD, Knight DA, Hogaboam CM, and Herzog EL
- Abstract
The chronic progressive decline in lung function observed in idiopathic pulmonary fibrosis (IPF) appears to result from persistent nonresolving injury to the epithelium, impaired restitution of the epithelial barrier in the lung, and enhanced fibroblast activation. Thus, understanding these key mechanisms and pathways modulating both is essential to greater understanding of IPF pathogenesis. We examined the association of VEGF with the IPF disease state and preclinical models in vivo and in vitro. Tissue and circulating levels of VEGF were significantly reduced in patients with IPF, particularly in those with a rapidly progressive phenotype, compared with healthy controls. Lung-specific overexpression of VEGF significantly protected mice following intratracheal bleomycin challenge, with a decrease in fibrosis and bleomycin-induced cell death observed in the VEGF transgenic mice. In vitro, apoptotic endothelial cell-derived mediators enhanced epithelial cell injury and reduced epithelial wound closure. This process was rescued by VEGF pretreatment of the endothelial cells via a mechanism involving thrombospondin-1 (TSP1). Taken together, these data indicate beneficial roles for VEGF during lung fibrosis via modulating epithelial homeostasis through a previously unrecognized mechanism involving the endothelium.
- Published
- 2017
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20. Early human symbolic behavior in the Late Pleistocene of Wallacea.
- Author
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Brumm A, Langley MC, Moore MW, Hakim B, Ramli M, Sumantri I, Burhan B, Saiful AM, Siagian L, Suryatman, Sardi R, Jusdi A, Abdullah, Mubarak AP, Hasliana, Hasrianti, Oktaviana AA, Adhityatama S, van den Bergh GD, Aubert M, Zhao JX, Huntley J, Li B, Roberts RG, Saptomo EW, Perston Y, and Grün R
- Subjects
- Archaeology, History, Ancient, Human Activities, Human Migration, Humans, Indonesia, Art history, Fossils, Social Behavior, Symbolism
- Abstract
Wallacea, the zone of oceanic islands separating the continental regions of Southeast Asia and Australia, has yielded sparse evidence for the symbolic culture of early modern humans. Here we report evidence for symbolic activity 30,000-22,000 y ago at Leang Bulu Bettue, a cave and rock-shelter site on the Wallacean island of Sulawesi. We describe hitherto undocumented practices of personal ornamentation and portable art, alongside evidence for pigment processing and use in deposits that are the same age as dated rock art in the surrounding karst region. Previously, assemblages of multiple and diverse types of Pleistocene "symbolic" artifacts were entirely unknown from this region. The Leang Bulu Bettue assemblage provides insight into the complexity and diversification of modern human culture during a key period in the global dispersal of our species. It also shows that early inhabitants of Sulawesi fashioned ornaments from body parts of endemic animals, suggesting modern humans integrated exotic faunas and other novel resources into their symbolic world as they colonized the biogeographically unique regions southeast of continental Eurasia., Competing Interests: The authors declare no conflict of interest.
- Published
- 2017
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21. Regulatory T Cells in Idiopathic Pulmonary Fibrosis: Too Much of a Good Thing?
- Author
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Moore MW and Herzog EL
- Subjects
- Humans, Pulmonary Fibrosis, Idiopathic Pulmonary Fibrosis, T-Lymphocytes, Regulatory
- Abstract
This commentary highlights the article by Birjandi et al showing that alterations in regulatory T cells can exacerbate lung fibrosis., (Copyright © 2016 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.)
- Published
- 2016
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22. Experimental Insights into the Cognitive Significance of Early Stone Tools.
- Author
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Moore MW and Perston Y
- Subjects
- Animals, Archaeology, History, Ancient, Cognition physiology, Evolution, Molecular, Hominidae physiology
- Abstract
Stone-flaking technology is the most enduring evidence for the evolving cognitive abilities of our early ancestors. Flake-making was mastered by African hominins ~3.3 ma, followed by the appearance of handaxes ~1.75 ma and complex stone reduction strategies by ~1.6 ma. Handaxes are stones flaked on two opposed faces ('bifacially'), creating a robust, sharp-edged tool, and complex reduction strategies are reflected in strategic prior flaking to prepare or 'predetermine' the nature of a later flake removal that served as a tool blank. These technologies are interpreted as major milestones in hominin evolution that reflect the development of higher-order cognitive abilities, and the presence and nature of these technologies are used to track movements of early hominin species or 'cultures' in the archaeological record. However, the warranting argument that certain variations in stone tool morphologies are caused by differences in cognitive abilities relies on analogy with technical replications by skilled modern stoneworkers, and this raises the possibility that researchers are projecting modern approaches to technical problems onto our non-modern hominin ancestors. Here we present the results of novel experiments that randomise flake removal and disrupt the modern stoneworker's inclination to use higher-order reasoning to guide the stone reduction process. Although our protocols prevented goal-directed replication of stone tool types, the experimental assemblage is morphologically standardised and includes handaxe-like 'protobifaces' and cores with apparently 'predetermined' flake removals. This shows that the geometrical constraints of fracture mechanics can give rise to what appear to be highly-designed stoneworking products and techniques when multiple flakes are removed randomly from a stone core.
- Published
- 2016
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23. Age and context of the oldest known hominin fossils from Flores.
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Brumm A, van den Bergh GD, Storey M, Kurniawan I, Alloway BV, Setiawan R, Setiyabudi E, Grün R, Moore MW, Yurnaldi D, Puspaningrum MR, Wibowo UP, Insani H, Sutisna I, Westgate JA, Pearce NJ, Duval M, Meijer HJ, Aziz F, Sutikna T, van der Kaars S, Flude S, and Morwood MJ
- Subjects
- Animals, Argon, Climate, Electron Spin Resonance Spectroscopy, Grassland, History, Ancient, Indonesia, Radioisotopes, Tool Use Behavior, Tooth chemistry, Volcanic Eruptions history, Wetlands, Archaeology, Environment, Fossils, Hominidae, Radiometric Dating
- Abstract
Recent excavations at the early Middle Pleistocene site of Mata Menge in the So'a Basin of central Flores, Indonesia, have yielded hominin fossils attributed to a population ancestral to Late Pleistocene Homo floresiensis. Here we describe the age and context of the Mata Menge hominin specimens and associated archaeological findings. The fluvial sandstone layer from which the in situ fossils were excavated in 2014 was deposited in a small valley stream around 700 thousand years ago, as indicated by (40)Ar/(39)Ar and fission track dates on stratigraphically bracketing volcanic ash and pyroclastic density current deposits, in combination with coupled uranium-series and electron spin resonance dating of fossil teeth. Palaeoenvironmental data indicate a relatively dry climate in the So'a Basin during the early Middle Pleistocene, while various lines of evidence suggest the hominins inhabited a savannah-like open grassland habitat with a wetland component. The hominin fossils occur alongside the remains of an insular fauna and a simple stone technology that is markedly similar to that associated with Late Pleistocene H. floresiensis.
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- 2016
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24. Fusiform Gyrus Laterality in Writing Systems with Different Mapping Principles: An Artificial Orthography Training Study.
- Author
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Hirshorn EA, Wrencher A, Durisko C, Moore MW, and Fiez JA
- Subjects
- Analysis of Variance, Brain Mapping, Female, Humans, Magnetic Resonance Imaging, Male, Neural Pathways diagnostic imaging, Neural Pathways physiology, Neuropsychological Tests, Photic Stimulation, Temporal Lobe diagnostic imaging, Young Adult, Learning physiology, Pattern Recognition, Visual physiology, Psycholinguistics, Reading, Temporal Lobe physiology
- Abstract
Writing systems vary in many ways, making it difficult to account for cross-linguistic neural differences. For example, orthographic processing of Chinese characters activates the mid-fusiform gyri (mFG) bilaterally, whereas the processing of English words predominantly activates the left mFG. Because Chinese and English vary in visual processing (holistic vs. analytical) and linguistic mapping principle (morphosyllabic vs. alphabetic), either factor could account for mFG laterality differences. We used artificial orthographies representing English to investigate the effect of mapping principle on mFG lateralization. The fMRI data were compared for two groups that acquired foundational proficiency: one for an alphabetic and one for an alphasyllabic artificial orthography. Greater bilateral mFG activation was observed in the alphasyllabic versus alphabetic group. The degree of bilaterality correlated with reading fluency for the learned orthography in the alphasyllabic but not alphabetic group. The results suggest that writing systems with a syllable-based mapping principle recruit bilateral mFG to support orthographic processing. Implications for individuals with left mFG dysfunction will be discussed.
- Published
- 2016
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25. Netrin-1 Regulates Fibrocyte Accumulation in the Decellularized Fibrotic Sclerodermatous Lung Microenvironment and in Bleomycin-Induced Pulmonary Fibrosis.
- Author
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Sun H, Zhu Y, Pan H, Chen X, Balestrini JL, Lam TT, Kanyo JE, Eichmann A, Gulati M, Fares WH, Bai H, Feghali-Bostwick CA, Gan Y, Peng X, Moore MW, White ES, Sava P, Gonzalez AL, Cheng Y, Niklason LE, and Herzog EL
- Subjects
- Animals, Antibiotics, Antineoplastic toxicity, Antibodies, Neutralizing pharmacology, Biomechanical Phenomena, Bleomycin toxicity, Case-Control Studies, Cell Differentiation, Collagen metabolism, Collagen Type I metabolism, Collagen Type I, alpha 1 Chain, Fibrosis, Flow Cytometry, Fluorescent Antibody Technique, Heterozygote, Humans, Leukocyte Common Antigens metabolism, Leukocytes, Mononuclear, Lung drug effects, Lung pathology, Lung Diseases, Interstitial etiology, Lung Diseases, Interstitial pathology, Mice, Mice, Knockout, Microscopy, Electron, Scanning, Nerve Growth Factors antagonists & inhibitors, Nerve Growth Factors genetics, Netrin-1, Proteomics, Pulmonary Fibrosis chemically induced, Pulmonary Fibrosis pathology, Reverse Transcriptase Polymerase Chain Reaction, Scleroderma, Systemic complications, Tissue Scaffolds, Tumor Suppressor Proteins antagonists & inhibitors, Tumor Suppressor Proteins genetics, Lung metabolism, Lung Diseases, Interstitial metabolism, Nerve Growth Factors metabolism, Pulmonary Fibrosis metabolism, Scleroderma, Systemic metabolism, Tumor Suppressor Proteins metabolism
- Abstract
Objective: Fibrocytes are collagen-producing leukocytes that accumulate in patients with systemic sclerosis (SSc; scleroderma)-related interstitial lung disease (ILD) via unknown mechanisms that have been associated with altered expression of neuroimmune proteins. The extracellular matrix (ECM) influences cellular phenotypes. However, a relationship between the lung ECM and fibrocytes in SSc has not been explored. The aim of this study was to use a novel translational platform based on decellularized human lungs to determine whether the lung ECM of patients with scleroderma controls the development of fibrocytes from peripheral blood mononuclear cells., Methods: We performed biomechanical evaluation of decellularized scaffolds prepared from lung explants from healthy control subjects and patients with scleroderma, using tensile testing and biochemical and proteomic analysis. Cells obtained from healthy controls and patients with SSc-related ILD were cultured on these scaffolds, and CD45+pro-ColIα1+ cells meeting the criteria for fibrocytes were quantified. The contribution of the neuromolecule netrin-1 to fibrosis was assessed using neutralizing antibodies in this system and by administering bleomycin via inhalation to netrin-1(+/-) mice., Results: Compared with control lung scaffolds, lung scaffolds from patients with SSc-related ILD showed aberrant anatomy, enhanced stiffness, and abnormal ECM composition. Culture of control cells in lung scaffolds from patients with SSc-related ILD increased production of pro-ColIα1+ cells, which was stimulated by enhanced stiffness and abnormal ECM composition. Cells from patients with SSc-related ILD demonstrated increased pro-ColIα1 responsiveness to lung scaffolds from scleroderma patients but not enhanced stiffness. Enhanced detection of netrin-1-expressing CD14(low) cells in patients with SSc-related ILD was observed, and antibody-mediated netrin-1 neutralization attenuated detection of CD45+pro-ColIα1+ cells in all settings. Netrin-1(+/-) mice were protected against bleomycin-induced lung fibrosis and fibrocyte accumulation., Conclusion: Factors present in the lung matrices of patients with scleroderma regulate fibrocyte accumulation via a netrin-1-dependent pathway. Netrin-1 regulates bleomycin-induced pulmonary fibrosis in mice. Netrin-1 might be a novel therapeutic target in SSc-related ILD., (© 2016, American College of Rheumatology.)
- Published
- 2016
- Full Text
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26. Earliest hominin occupation of Sulawesi, Indonesia.
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van den Bergh GD, Li B, Brumm A, Grün R, Yurnaldi D, Moore MW, Kurniawan I, Setiawan R, Aziz F, Roberts RG, Suyono, Storey M, Setiabudi E, and Morwood MJ
- Subjects
- Animals, History, Ancient, Human Migration history, Humans, Indonesia, Tool Use Behavior, Fossils, Hominidae
- Abstract
Sulawesi is the largest and oldest island within Wallacea, a vast zone of oceanic islands separating continental Asia from the Pleistocene landmass of Australia and Papua (Sahul). By one million years ago an unknown hominin lineage had colonized Flores immediately to the south, and by about 50 thousand years ago, modern humans (Homo sapiens) had crossed to Sahul. On the basis of position, oceanic currents and biogeographical context, Sulawesi probably played a pivotal part in these dispersals. Uranium-series dating of speleothem deposits associated with rock art in the limestone karst region of Maros in southwest Sulawesi has revealed that humans were living on the island at least 40 thousand years ago (ref. 5). Here we report new excavations at Talepu in the Walanae Basin northeast of Maros, where in situ stone artefacts associated with fossil remains of megafauna (Bubalus sp., Stegodon and Celebochoerus) have been recovered from stratified deposits that accumulated from before 200 thousand years ago until about 100 thousand years ago. Our findings suggest that Sulawesi, like Flores, was host to a long-established population of archaic hominins, the ancestral origins and taxonomic status of which remain elusive.
- Published
- 2016
- Full Text
- View/download PDF
27. Supracricoid partial laryngectomy with cricohyoidoepiglottopexy: surgical technique illustrated in the anatomy laboratory.
- Author
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Holsinger FC, Tomeh C, Moore MW, Yan W, Chen C, and Laccourreye O
- Subjects
- Cadaver, Humans, Minimally Invasive Surgical Procedures methods, Patient Positioning, Plastic Surgery Procedures methods, Cricoid Cartilage surgery, Laryngeal Neoplasms surgery, Laryngectomy methods, Surgical Flaps transplantation
- Published
- 2015
- Full Text
- View/download PDF
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