16 results on '"Natasha Letunica"'
Search Results
2. Fibrin clot characteristics and anticoagulant response in a SARS‐CoV‐2‐infected endothelial model
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Conor McCafferty, Leo Lee, Tengyi Cai, Slavica Praporski, Julian Stolper, Vasiliki Karlaftis, Chantal Attard, David Myint, Leeanne M. Carey, David W. Howells, Geoffrey A. Donnan, Stephen Davis, Henry Ma, Sheila Crewther, Vinh A. Nguyen, Suelyn Van Den Helm, Natasha Letunica, Ella Swaney, David Elliott, Kanta Subbarao, Vera Ignjatovic, and Paul Monagle
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anticoagulation ,blood coagulation ,cell culture ,electron microscopy ,viruses ,Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Abstract Coronavirus disease 2019 (COVID‐19) patients have increased thrombosis risk. With increasing age, there is an increase in COVID‐19 severity. Additionally, adults with a history of vasculopathy have the highest thrombotic risk in COVID‐19. The mechanisms of these clinical differences in risk remain unclear. Human umbilical vein endothelial cells (HUVECs) were infected with SARS‐CoV‐2, influenza A/Singapore/6/86 (H1N1) or mock‐infected prior to incubation with plasma from healthy children, healthy adults or vasculopathic adults. Fibrin on surface of cells was observed using scanning electron microscopy, and fibrin characteristics were quantified. This experiment was repeated in the presence of bivalirudin, defibrotide, low‐molecular‐weight‐heparin (LMWH) and unfractionated heparin (UFH). Fibrin formed on SARS‐CoV‐2 infected HUVECs was densely packed and contained more fibrin compared to mock‐infected cells. Fibrin generated from child plasma was the thicker than fibrin generated in vasculopathic adult plasma (p = 0.0165). Clot formation was inhibited by LMWH (0.5 U/ml) and UFH (0.1–0.7 U/ml). We show that in the context of the SARS‐CoV‐2 infection on an endothelial culture, plasma from vasculopathic adults produces fibrin clots with thinner fibrin, indicating that the plasma coagulation system may play a role in determining the thrombotic outcome of SARS‐CoV‐2 infection. Heparinoid anticoagulants were most effective at preventing clot formation.
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- 2022
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3. Changes in von Willebrand Factor Multimers, Concentration, and Function During Pediatric Extracorporeal Membrane Oxygenation*
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Suelyn, Van Den Helm, Natasha, Letunica, Rebecca, Barton, Asami, Weaver, Hui Ping, Yaw, Vasiliki, Karlaftis, Conor, McCafferty, Tengyi, Cai, Fiona, Newall, Stephen B, Horton, Roberto, Chiletti, Amy, Johansen, Derek, Best, Joanne, McKittrick, Warwick, Butt, Yves, d'Udekem, Graeme, MacLaren, Matthew D, Linden, Vera, Ignjatovic, and Paul, Monagle
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Pediatrics, Perinatology and Child Health ,Critical Care and Intensive Care Medicine - Abstract
To investigate changes in von Willebrand factor (VWF) concentration, function, and multimers during pediatric extracorporeal membrane oxygenation (ECMO) and determine whether routine monitoring of VWF during ECMO would be useful in predicting bleeding.Prospective observational study of pediatric ECMO patients from April 2017 to May 2019.The PICU in a large, tertiary referral pediatric ECMO center.Twenty-five neonates and children (18 yr) supported by venoarterial ECMO.None.Arterial blood samples were collected within 24 hours pre-ECMO, daily for the first 5 days of ECMO, every second day until decannulation, and 24 hours post-ECMO. The STA R Max analyzer was used to measure VWF antigen (VWF:Ag) and ristocetin cofactor (VWF:RCo) activity. VWF collagen binding (VWF:CB) was measured using an enzyme-linked immunosorbent assay. VWF multimers were measured using the semi-automated Hydragel 11 VWF Multimer assay. Corresponding clinical data for each patient was also recorded. A total of 25 venoarterial ECMO patients were recruited (median age, 73 d; interquartile range [IQR], 3 d to 1 yr). The median ECMO duration was 4 days (IQR, 3-8 d) and 15 patients had at least one major bleed during ECMO. The percentage of high molecular weight multimers (HMWM) decreased and intermediate molecular weight multimers increased while patients were on ECMO, irrespective of a bleeding status. VWF:Ag increased and the VWF:RCo/VWF:Ag and VWF:CB/VWF:Ag ratios decreased while patients were on ECMO compared with the baseline pre-ECMO samples and healthy children.Neonates and children on ECMO exhibited a loss of HMWM and lower VWF:CB/VWF:Ag and VWF:RCo/VWF:Ag ratios compared with healthy children, irrespective of major bleeding occurring. Therefore, monitoring VWF during ECMO would not be useful in predicting bleeding in these patients and changes to other hemostatic factors should be investigated to further understand bleeding during ECMO.
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- 2023
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4. Platelet function in neonates and children
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Suelyn Van Den Helm, Conor McCafferty, Natasha Letunica, Ka Ying Chau, Paul Monagle, and Vera Ignjatovic
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Hematology - Published
- 2023
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5. The Proportions of Low- and Intermediate-Molecular-Weight von Willebrand Factor Multimers Are Different in Neonates and Infants Compared to Adults
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Paul Monagle, Natasha Letunica, Asami Weaver, Vera Ignjatovic, Rebecca Barton, Vasiliki Karlaftis, and Suelyn Van Den Helm
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Adult ,medicine.medical_specialty ,Factor VIII ,business.industry ,Infant, Newborn ,Hematology ,Von Willebrand factor multimers ,Molecular Weight ,von Willebrand Diseases ,Endocrinology ,Internal medicine ,von Willebrand Factor ,Humans ,Medicine ,Blood Coagulation Tests ,business - Published
- 2021
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6. Protocol for the Investigation of Plasma and Whole Blood Clot Property of Fibrin Fiber Thickness Using Scanning Electron Microscopy
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Tengyi Cai, Conor McCafferty, Suelyn Van Den Helm, Natasha Letunica, Chantal Attard, Paul Monagle, and Vera Ignjatovic
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- 2023
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7. Blood Collection Processing and Handling for Plasma and Serum Proteomics
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Conor McCafferty, Natasha Letunica, Ella Swaney, Cai Tengyi, Paul Monagle, Vera Ignjatovic, and Chantal Attard
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- 2023
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8. Proteomic Applications and Considerations: From Research to Patient Care
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Natasha Letunica, Conor McCafferty, Ella Swaney, Tengyi Cai, Paul Monagle, Vera Ignjatovic, and Chantal Attard
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- 2023
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9. Newborn and Pediatric Reference Intervals for Coagulation Assays Using Novel Reagents
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Natasha Letunica, Vasiliki Karlaftis, Paul Monagle, and Vera Ignjatovic
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Reference Values ,Infant, Newborn ,Humans ,Indicators and Reagents ,Hematology ,Blood Coagulation Tests ,Child - Published
- 2022
10. Increased platelet activation in SARS‐CoV‐2 infected non‐hospitalised children and adults, and their household contacts
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David Burgner, Chantal Attard, Paul Monagle, Tengyi Cai, Natasha Letunica, Melanie R Neeland, Luisa Clucas, Shidan Tosif, Ella Swaney, Nigel W Crawford, Conor McCafferty, Slavica Praporski, Vasiliki Karlaftis, Kate Dohle, Suelyn Van Den Helm, and Vera Ignjatovic
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Adult ,Family Characteristics ,2019-20 coronavirus outbreak ,Adolescent ,Coronavirus disease 2019 (COVID-19) ,SARS-CoV-2 ,business.industry ,flow cytometry ,platelet function ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Family characteristics ,COVID-19 ,Paediatrics ,Hematology ,Platelet Activation ,Virology ,virology ,Young Adult ,Correspondence ,Humans ,Medicine ,Platelet activation ,Young adult ,Child ,business - Published
- 2021
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11. Platelet Phenotype and Function Changes With Increasing Duration of Extracorporeal Membrane Oxygenation
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Suelyn Van Den Helm, Hui Ping Yaw, Natasha Letunica, Rebecca Barton, Asami Weaver, Fiona Newall, Stephen B. Horton, Roberto Chiletti, Amy Johansen, Derek Best, Joanne McKittrick, Warwick Butt, Yves d’Udekem, Graeme MacLaren, Matthew D. Linden, Vera Ignjatovic, and Paul Monagle
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Blood Platelets ,Extracorporeal Membrane Oxygenation ,Phenotype ,Selectins ,Humans ,Hemorrhage ,Thrombosis ,Critical Care and Intensive Care Medicine - Abstract
To investigate platelet pathophysiology associated with pediatric extracorporeal membrane oxygenation (ECMO).Prospective observational study of neonatal and pediatric ECMO patients from September 1, 2016, to December 31, 2019.The PICU in a large tertiary referral pediatric ECMO center.Eighty-seven neonates and children (18 yr) supported by ECMO.None.Arterial blood samples were collected on days 1, 2, and 5 of ECMO and were analyzed by whole blood flow cytometry. Corresponding clinical data for each patient was also recorded. A total of 87 patients were recruited (median age, 65 d; interquartile range [IQR], 7 d to 4 yr). The median duration of ECMO was 5 days (IQR, 3-8 d) with a median length of stay in PICU and hospital of 18 days (IQR, 10-29 d) and 35 days (IQR, 19-75 d), respectively. Forty-two patients (48%) had at least one major bleed according to a priori determined definitions, and 12 patients (14%) had at least one thrombotic event during ECMO. Platelet fibrinogen receptor expression decreased (median fluorescence intensity [MFI], 29,256 vs 26,544; p = 0.0005), while von Willebrand Factor expression increased (MFI: 7,620 vs 8,829; p = 0.0459) from day 2 to day 5 of ECMO. Platelet response to agonist, Thrombin Receptor Activator Peptide 6, also decreased from day 2 to day 5 of ECMO, as measured by binding with anti-P-selectin, PAC-1 (binds activated GPIIb/IIIa), and anti-CD63 monoclonal antibodies (P-selectin area under the curve [AUC]: 63.46 vs 42.82, respectively, p = 0.0022; PAC-1 AUC: 93.75 vs 74.46, p = 0.0191; CD63 AUC: 55.69 vs 41.76, p = 0.0020).The loss of platelet response over time may contribute to bleeding during ECMO. These novel insights may be useful in understanding mechanisms of bleeding in pediatric ECMO and monitoring platelet markers clinically could allow for prediction or early detection of bleeding and thrombosis.
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- 2022
12. Advances and Utility of the Human Plasma Proteome
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Michal Maes, Natasha Letunica, Krishnan K. Palaniappan, Yves Vandenbrouck, Robert L. Moritz, Gilbert S. Omenn, Sheng-Ce Tao, Virginie Brun, Maria Pernemalm, Vera Ignjatovic, Eric W. Deutsch, Philipp E. Geyer, Xiaobo Yu, Zhi Sun, Jochen M. Schwenk, Institute for Systems Biology [Seattle] (ISB), University of Michigan [Ann Arbor], University of Michigan System, Karolinska Institutet [Stockholm], Murdoch Children's Research Institute (MCRI), Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Shanghai Jiao Tong University [Shanghai], Beijing Institute of Lifeomics [China], University of Melbourne, Etude de la dynamique des protéomes (EDyP), BioSanté (UMR BioSanté), Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes (UGA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes (UGA), Institut d'Informatique et de Mathématiques Appliquées de Grenoble (IMAG), and Université Joseph Fourier - Grenoble 1 (UJF)-Institut National Polytechnique de Grenoble (INPG)-Centre National de la Recherche Scientifique (CNRS)
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Aging ,PeptideAtlas ,Proteome ,[SDV]Life Sciences [q-bio] ,Genomics ,Computational biology ,DNA aptamers (Somascan) ,Biology ,Proteomics ,Biochemistry ,Article ,proteomics ,blood ,proximity extension assays (PEA by Olink) ,Human proteome project ,Humans ,Databases, Protein ,Human Proteome Project ,plasma ,mass spectrometry ,Hemostasis ,COVID-19 ,General Chemistry ,Extracellular vesicle ,Precision medicine ,Human plasma ,Human Plasma Proteome Project - Abstract
International audience; The study of proteins circulating in blood offers tremendous opportunities to diagnose, stratify, or possibly prevent diseases. With recent technological advances and the urgent need to understand the effects of COVID-19, the proteomic analysis of blood-derived serum and plasma has become even more important for studying human biology and pathophysiology. Here we provide views and perspectives about technological developments and possible clinical applications that use mass-spectrometry(MS)- or affinity-based methods. We discuss examples where plasma proteomics contributed valuable insights into SARS-CoV-2 infections, aging, and hemostasis and the opportunities offered by combining proteomics with genetic data. As a contribution to the Human Proteome Organization (HUPO) Human Plasma Proteome Project (HPPP), we present the Human Plasma PeptideAtlas build 2021-07 that comprises 4395 canonical and 1482 additional nonredundant human proteins detected in 240 MS-based experiments. In addition, we report the new Human Extracellular Vesicle PeptideAtlas 2021-06, which comprises five studies and 2757 canonical proteins detected in extracellular vesicles circulating in blood, of which 74% (2047) are in common with the plasma PeptideAtlas. Our overview summarizes the recent advances, impactful applications, and ongoing challenges for translating plasma proteomics into utility for precision medicine.
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- 2021
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13. Proteomics in Thrombosis and Hemostasis
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Conor McCafferty, Ella Swaney, Vasiliki Karlaftis, Natasha Letunica, Chantal Attard, Paul Monagle, Tengyi Cai, Suelyn Van Den Helm, and Vera Ignjatovic
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Blood Platelets ,Proteomics ,Hemostasis ,Proteome ,business.industry ,MEDLINE ,Thrombosis ,Hematology ,Bioinformatics ,medicine.disease ,Review article ,Medicine ,Humans ,business ,Biomarkers - Abstract
Proteomics, the simultaneous study of all proteins in a given cell, tissue or organism, is an innovative approach used to identify novel markers for diagnosis, prognosis and the pathophysiological mechanisms associated with diseases. Proteomic methodologies have been used in a variety of contexts such as investigating changes in protein abundance that may occur with disease presence, the response to therapeutic treatments as well as the impacts of age on the plasma proteome.Over the last decade, significant technological advancements in proteomic techniques have resulted in an increase in the use of proteomics in thrombosis and hemostasis research, particularly in order to identify relevant and novel clinical markers associated with bleeding and thrombosis. This mini-review explores the use of proteomics in the setting of thrombosis and hemostasis from 2010-2020, across five main domains (platelets, blood clot composition, stroke, venous thromboembolism, and therapeutics), as well as provides insights into key considerations for conducting proteomic studies.
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- 2021
14. The use of proteomics for blood biomarker research in premature infants: a scoping review
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Natasha Letunica, Vera Ignjatovic, Paul Monagle, Tengyi Cai, Jeanie L.Y. Cheong, and Lex W. Doyle
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Proteomics ,0301 basic medicine ,medicine.medical_specialty ,Clinical Biochemistry ,MEDLINE ,Review ,Premature Infants ,03 medical and health sciences ,0302 clinical medicine ,030225 pediatrics ,medicine ,Intensive care medicine ,Molecular Biology ,Late onset sepsis ,business.industry ,Gestational age ,Retinopathy of prematurity ,General Medicine ,medicine.disease ,030104 developmental biology ,Systematic review ,Bronchopulmonary dysplasia ,Molecular Medicine ,Biomarker (medicine) ,Prematurity ,business ,Biomarkers - Abstract
Over the last decade, the use of proteomics in the setting of prematurity has increased and has enabled researchers to successfully identify biomarkers for an array of associated morbidities. The objective of this scoping review was to identify the existing literature, as well as any knowledge gaps related to proteomic biomarker discoveries in the setting of prematurity. A scoping review was conducted using PubMed, Embase and Medline databases following the Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) guidelines. The study selection process yielded a total of 700 records, of which 13 studies were included in this review. Most studies used a tandem Mass Spectrometry (MS/MS) proteomics approach to identify key biomarkers. The corresponding studies identified proteins associated with retinopathy of prematurity (ROP), bronchopulmonary dysplasia (BPD), necrotising enterocolitis (NEC), late onset sepsis (LOS) and gestational age. This scoping review demonstrates the limited use of proteomics to identify biomarkers associated with severe complications of prematurity. Further research is warranted to identify biomarkers of other important morbidities associated with prematurity, such as intraventricular haemorrhage (IVH) and cerebral palsy, and to investigate the mechanisms associated with these outcomes.
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- 2021
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15. Investigating potential protein markers of cardiovascular disease in children with type 1 diabetes mellitus
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Fergus J. Cameron, Vera Ignjatovic, Chantal Attard, Natasha Letunica, Paul Monagle, and Tengyi Cai
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0301 basic medicine ,Autoimmune disease ,Type 1 diabetes ,medicine.medical_specialty ,endocrine system diseases ,030102 biochemistry & molecular biology ,Heart disease ,business.industry ,Clinical Biochemistry ,nutritional and metabolic diseases ,Venous blood ,Disease ,medicine.disease ,03 medical and health sciences ,030104 developmental biology ,Clinical research ,Blood pressure ,Diabetes Mellitus, Type 1 ,Diabetes mellitus ,Internal medicine ,medicine ,business - Abstract
BACKGROUND: Type 1 diabetes mellitus (T1DM) is a metabolic disease characterized by dysglycaemia. Cardiovascular disease (CVD) is a major complication among T1DM patients and the leading cause of mortality later in life. METHODS: The study subjects consisted of T1DM children with poor glycemic control (HbA1c > 7.5%) and healthy age and gender matched controls. Venous blood samples were collected and tested by utilizing a novel immunoassay panel with 96 protein biomarkers. Data were analyzed using non-linear regression analysis and the expression of biomarkers was compared between T1DM and healthy control groups using an unpaired student's t-test. Dynamic principal component analysis (PCA) was operated based on the differentially expressed proteins. RESULTS: Ten T1DM children and 10 healthy controls were analyzed. Twelve CVD markers show significant differential expression between T1DM patients and healthy controls (p
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- 2020
16. Age-specific differences in the in vitro anticoagulant effect of Bivalirudin in healthy neonates and children compared to adults
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Jessica Cowley, Natasha Letunica, Paul Monagle, Vera Ignjatovic, and Xavier Busuttil-Crellin
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Adult ,Adolescent ,030204 cardiovascular system & hematology ,Pharmacology ,Extracorporeal ,03 medical and health sciences ,0302 clinical medicine ,Thrombin ,Medicine ,Bivalirudin ,Humans ,Child ,Platelet-poor plasma ,business.industry ,Heparin ,Age Factors ,Infant, Newborn ,Anticoagulants ,Infant ,Hematology ,Hirudins ,Peptide Fragments ,Recombinant Proteins ,Coagulation ,Bypass surgery ,Direct thrombin inhibitor ,030220 oncology & carcinogenesis ,Child, Preschool ,business ,medicine.drug - Abstract
Bivalirudin is a reversible direct thrombin inhibitor that inhibits both bound and free thrombin and binds to the active (catalytic) and fibrinogen-binding sites of thrombin, with high affinity and specificity. Off-label use of bivalirudin in the paediatric population has increased, as an alternative to heparin, particularly in the setting of anticoagulation for patients undergoing coronary bypass surgery (CPB), extracorporeal life support (ECLS) and those on ventricular assist devices (VAD). This study aimed to determine the age-specific in vitro effect of bivalirudin in children compared to adults. Age-specific pools (neonates, ≤2 years,2 to 5 years, 6 to 10 years, 11 to 17 years and Adults) were prepared using platelet poor plasma samples from 20 individuals per age group. Pooled plasma was spiked with increasing concentrations of Bivalirudin (from 0 g/mL to 10μg/mL), and thrombin inhibition was measured using standard coagulation assays. There was a significantly increased response to bivalirudin across all paediatric age groups as compared to adults. The age-specific difference in response to bivalirudin was specifically evident in neonates, where the potential to generate thrombin was decreased 2-fold compared to adults (p 0.001). Our findings support the concept of age-specific pharmaco-dynamic responses to Bivalirudin and support the need for further ex vivo studies in hospitalised children to determine accurate clinical dosing recommendations.
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- 2020
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