35 results on '"Tuuri T"'
Search Results
2. P-659 Natural cycle versus medically programmed cycle in frozen embryo transfer: a retrospective analysis
- Author
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Sneck, M, primary, Hyden-Granskog, C, additional, Granroth-Wilding, H, additional, Savolainen-Peltonen, H, additional, Tuuri, T, additional, Tapanainen, J S, additional, and Luiro, K, additional
- Published
- 2023
- Full Text
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3. P-422 Ovarian tissue vitrification as a low-technology and cost-effective protocol for female fertility preservation: a bovine study
- Author
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Deligiannis, S P, primary, Kask, K, additional, Modhukur, V, additional, Ivask, M, additional, Jaakma, Ü, additional, Damdimopoulou, P, additional, Tuuri, T, additional, Velthut-Meikas, A, additional, and Salumets, A, additional
- Published
- 2023
- Full Text
- View/download PDF
4. P-793 The effect of Nuclear Receptor Subfamily 5 Group A Member 1 (NR5A1) in human ovarian somatic cell development
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Danti, L, primary, Lundin, K, additional, Sepponen, K, additional, Yohannes, D.A, additional, Kere, J, additional, Tuuri, T, additional, and Tapanainen, J, additional
- Published
- 2022
- Full Text
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5. Steroidogenic factor 1 (NR5A1) induces multiple transcriptional changes during differentiation of human gonadal-like cells
- Author
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Sepponen, K. (Kirsi), Lundin, K. (Karolina), Yohannes, D. A. (Dawit A.), Vuoristo, S. (Sanna), Balboa, D. (Diego), Poutanen, M. (Matti), Ohlsson, C. (Claes), Hustad, S. (Steinar), Bifulco, E. (Ersilia), Paloviita, P. (Pauliina), Otonkoski, T. (Timo), Ritvos, O. (Olli), Sainio, K. (Kirsi), Tapanainen, J. S. (Juha S.), Tuuri, T. (Timo), Sepponen, K. (Kirsi), Lundin, K. (Karolina), Yohannes, D. A. (Dawit A.), Vuoristo, S. (Sanna), Balboa, D. (Diego), Poutanen, M. (Matti), Ohlsson, C. (Claes), Hustad, S. (Steinar), Bifulco, E. (Ersilia), Paloviita, P. (Pauliina), Otonkoski, T. (Timo), Ritvos, O. (Olli), Sainio, K. (Kirsi), Tapanainen, J. S. (Juha S.), and Tuuri, T. (Timo)
- Abstract
Nuclear receptor subfamily 5 group A member 1 (NR5A1) encodes steroidogenic factor 1 (SF1), a key regulatory factor that determines gonadal development and coordinates endocrine functions. Here, we have established a stem cell-based model of human gonadal development and applied it to evaluate the effects of NR5A1 during the transition from bipotential gonad to testicular cells. We combined directed differentiation of human induced pluripotent stem cells (46,XY) with activation of endogenous NR5A1 expression by conditionally-inducible CRISPR activation. The resulting male gonadal-like cells expressed several Sertoli cell transcripts, secreted anti-Müllerian hormone and responded to follicle-stimulating hormone by producing sex steroid intermediates. These characteristics were not induced without NR5A1 activation. A total of 2691 differentially expressed genetic elements, including both coding and non-coding RNAs, were detected immediately following activation of NR5A1 expression. Of those, we identified novel gonad-related putative NR5A1 targets, such as SCARA5, which we validated also by immunocytochemistry. In addition, NR5A1 activation was associated with dynamic expression of multiple gonad- and infertility-related differentially expressed genes. In conclusion, by combining targeted differentiation and endogenous activation of NR5A1 we have for the first time, been able to examine in detail the effects of NR5A1 in early human gonadal cells. The model and results obtained provide a useful resource for future investigations exploring the causative reasons for gonadal dysgenesis and infertility in humans.
- Published
- 2022
6. Human pluripotent stem cell-derived cells endogenously expressing follicle-stimulating hormone receptors:modeling the function of an inactivating receptor mutation
- Author
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Lundin, K. (K.), Sepponen, K. (K.), Väyrynen, P. (P.), Liu, X. (X.), Yohannes, D. A. (D. A.), Survila, M. (M.), Ghimire, B. (B.), Känsäkoski, J. (J.), Katayama, S. (S.), Partanen, J. (J.), Vuoristo, S. (S.), Paloviita, P. (P.), Rahman, N. (N.), Raivio, T. (T.), Luiro, K. (K.), Huhtaniemi, I. (I.), Varjosalo, M. (M.), Tuuri, T. (T.), Tapanainen, J. S. (J. S.), Lundin, K. (K.), Sepponen, K. (K.), Väyrynen, P. (P.), Liu, X. (X.), Yohannes, D. A. (D. A.), Survila, M. (M.), Ghimire, B. (B.), Känsäkoski, J. (J.), Katayama, S. (S.), Partanen, J. (J.), Vuoristo, S. (S.), Paloviita, P. (P.), Rahman, N. (N.), Raivio, T. (T.), Luiro, K. (K.), Huhtaniemi, I. (I.), Varjosalo, M. (M.), Tuuri, T. (T.), and Tapanainen, J. S. (J. S.)
- Abstract
Follicle-stimulating hormone (FSH) is crucial in the development and regulation of reproductive functions. The actions of human FSH and its receptor (FSHR) and mutations therein have mainly been studied using in vivo models, primary cells, cancer cells and cell lines ectopically expressing the FSHR. To allow studies of endogenous FSHR function in vitro, we differentiated FSHR-expressing cells from human pluripotent stem cells. FSH stimulation of the wild-type (WT), but not the inactivating Finnish founder mutant (A189V) receptor, activated the canonical cyclic adenosine monophosphate (cAMP)-dependent signaling pathway and downstream mediators. To investigate protein–protein interaction partners of FSHR at resting state and upon FSH stimulation, we expressed FSHR in HEK293 cells followed by affinity purification mass spectrometry analyses. We found 19 specific high-confidence interacting proteins for WT FSHR and 14 for A189V FSHR, several of which have been linked to infertility. Interestingly, while only WT FSHR interacted with FSH, insulin-like growth factor 1 receptor (IGF1R), for example, interacted with both WT and A189V FSHR upon FSH stimulation. In conclusion, our protocol allows detailed studies of FSH action and disease modeling in human cells endogenously expressing FSHR.
- Published
- 2022
7. Human pluripotent stem cell-derived cells endogenously expressing follicle-stimulating hormone receptors: modeling the function of an inactivating receptor mutation
- Author
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Lundin, K, primary, Sepponen, K, additional, Väyrynen, P, additional, Liu, X, additional, Yohannes, D A, additional, Survila, M, additional, Ghimire, B, additional, Känsäkoski, J, additional, Katayama, S, additional, Partanen, J, additional, Vuoristo, S, additional, Paloviita, P, additional, Rahman, N, additional, Raivio, T, additional, Luiro, K, additional, Huhtaniemi, I, additional, Varjosalo, M, additional, Tuuri, T, additional, and Tapanainen, J S, additional
- Published
- 2022
- Full Text
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8. P–699 Multi-scale study of the architecture, topography and mechanics of the human ovary from prepuberty to menopause: a blueprint for next-generation bioengineering and diagnosis
- Author
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Ouni, E, primary, Haas, K T, additional, Peaucelle, A, additional, Va. Kerk1, O, additional, Dolmans, M M, additional, Tuuri, T, additional, Otala, M, additional, and Andrad. Amorim, C, additional
- Published
- 2021
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9. Small RNA expression and miRNA modification dynamics in human oocytes and early embryos
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Paloviita, P. (Pauliina), Hydén-Granskog, C. (Christel), Yohannes, D. A. (Dawit A.), Paluoja, P. (Priit), Kere, J. (Juha), Tapanainen, J. S. (Juha S.), Krjutškov, K. (Kaarel), Tuuri, T. (Timo), Võsa, U. (Urmo), and Vuoristo, S. (Sanna)
- Abstract
Small noncoding RNAs (sRNAs) play important roles during the oocyte-to-embryo transition (OET), when the maternal phenotype is reprogrammed and the embryo genome is gradually activated. The transcriptional program driving early human development has been studied with the focus mainly on protein-coding RNAs, and expression dynamics of sRNAs remain largely unexplored. We profiled sRNAs in human oocytes and early embryos using an RNA-sequencing (RNA-seq) method suitable for low inputs of material. We show that OET in humans is temporally coupled with the transition from predominant expression of oocyte short piRNAs (os-piRNAs) in oocytes, to activation of microRNA (miRNA) expression in cleavage stage embryos. Additionally, 3′ mono- and oligoadenylation of miRNAs is markedly increased in zygotes. We hypothesize that this may modulate the function or stability of maternal miRNAs, some of which are retained throughout the first cell divisions in embryos. This study is the first of its kind elucidating the dynamics of sRNA expression and miRNA modification along a continuous trajectory of early human development and provides a valuable data set for in-depth interpretative analyses.
- Published
- 2021
10. Complement in human pre-implantation embryos:attack and defense
- Author
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Reichhardt, M. P. (Martin P.), Lundin, K. (Karolina), Lokki, A. I. (A. Inkeri), Recher, G. (Gaëlle), Vuoristo, S. (Sanna), Katayama, S. (Shintaro), Tapanainen, J. S. (Juha S.), Kere, J. (Juha), Meri, S. (Seppo), and Tuuri, T. (Timo)
- Subjects
pre-implantation ,mucosal immunology ,reproductive immunology ,embryo ,complement ,development - Abstract
It is essential for early human life that mucosal immunological responses to developing embryos are tightly regulated. An imbalance of the complement system is a common feature of pregnancy complications. We hereby present the first full analysis of the expression and deposition of complement molecules in human pre-implantation embryos. Thus, far, immunological imbalance has been considered in stages of pregnancy following implantation. We here show that complement activation against developing human embryos takes place already at the pre-implantation stage. Using confocal microscopy, we observed deposition of activation products on healthy developing embryos, which highlights the need for strict complement regulation. We show that embryos express complement membrane inhibitors and bind soluble regulators. These findings show that mucosal complement targets human embryos, and indicate potential adverse pregnancy outcomes, if regulation of activation fails. In addition, single-cell RNA sequencing revealed cellular expression of complement activators. This shows that the embryonic cells themselves have the capacity to express and activate C3 and C5. The specific local embryonic expression of complement components, regulators, and deposition of activation products on the surface of embryos suggests that complement has immunoregulatory functions and furthermore may impact cellular homeostasis and differentiation at the earliest stages of life.
- Published
- 2019
11. rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology
- Author
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Marjonen, H., Auvinen, P., Kahila, H., Tšuiko, O., Kõks, S., Tiirats, A., Viltrop, T., Tuuri, T., Söderström-Anttila, V., Suikkari, A-M, Salumets, A., Tiitinen, A., Kaminen-Ahola, N., Marjonen, H., Auvinen, P., Kahila, H., Tšuiko, O., Kõks, S., Tiirats, A., Viltrop, T., Tuuri, T., Söderström-Anttila, V., Suikkari, A-M, Salumets, A., Tiitinen, A., and Kaminen-Ahola, N.
- Abstract
Background Assisted reproductive technology (ART) has been associated with low birth weight of fresh embryo transfer (FRESH) derived and increased birth weight of frozen embryo transfer (FET)-derived newborns. Owing to that, we focused on imprinted insulin-like growth factor 2 (IGF2)/H19 locus known to be important for normal growth. This locus is regulated by H19 imprinting control region (ICR) with seven binding sites for the methylation-sensitive zinc finger regulatory protein (CTCF). A polymorphism rs10732516 G/A in the sixth binding site for CTCF, associates with a genotype-specific trend to the DNA methylation. Due to this association, 62 couples with singleton pregnancies derived from FRESH (44 IVF/18 ICSI), 24 couples from FET (15 IVF/9 ICSI), and 157 couples with spontaneously conceived pregnancies as controls were recruited in Finland and Estonia for genotype-specific examination. DNA methylation levels at the H19 ICR, H19 DMR, and long interspersed nuclear elements in placental tissue were explored by MassARRAY EpiTYPER (n = 122). Allele-specific changes in the methylation level of H19 ICR in placental tissue (n = 26) and white blood cells (WBC, n = 8) were examined by bisulfite sequencing. Newborns’ (n = 243) anthropometrics was analyzed by using international growth standards. Results A consistent trend of genotype-specific decreased methylation level was observed in paternal allele of rs10732516 paternal A/maternal G genotype, but not in paternal G/maternal A genotype, at H19 ICR in ART placentas. This hypomethylation was not detected in WBCs. Also genotype-specific differences in FRESH-derived newborns’ birth weight and head circumference were observed (P = 0.04, P = 0.004, respectively): FRESH-derived newborns with G/G genotype were heavier (P = 0.04) and had larger head circumference (P = 0.002) compared to newborns with A/A genotype. Also, the placental weight and birth weight of controls, FRESH- and FET-derived newborns differed significantly in r
- Published
- 2018
12. In-depth analysis of transcriptomes in ovarian cortical follicles from children and adults reveals interfollicular heterogeneity.
- Author
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Rooda I, Hassan J, Hao J, Wagner M, Moussaud-Lamodière E, Jääger K, Otala M, Knuus K, Lindskog C, Papaikonomou K, Gidlöf S, Langenskiöld C, Vogt H, Frisk P, Malmros J, Tuuri T, Salumets A, Jahnukainen K, Velthut-Meikas A, and Damdimopoulou P
- Subjects
- Female, Humans, Adult, Child, Oocytes metabolism, MicroRNAs genetics, MicroRNAs metabolism, Gene Expression Profiling, Cyclophosphamide, Cryopreservation, Fertility Preservation methods, Adolescent, Signal Transduction, Child, Preschool, Ovarian Follicle metabolism, Transcriptome
- Abstract
The ovarian cortical reserve of follicles is vital for fertility. Some medical treatments are toxic to follicles, leading to premature ovarian insufficiency. Ovarian tissue cryopreservation is an established method to preserve fertility in adults and even applied in prepuberty despite unproven efficacy. Here, we analyze transcriptomes of 120 cortical follicles from children and adults for detailed comparison. We discover heterogeneity with two main types of follicles in both age groups: one with expected oocyte-granulosa profiles and another with predicted role in signaling. Transcriptional changes during growth to the secondary stage are similar overall in children and adults, but variations related to extracellular matrix, theca cells, and miRNA profiles are found. Notably, cyclophosphamide dose correlates with interferon signaling in child follicles. Additionally, morphology alone is insufficient for follicle categorization suggesting a need for additional markers. Marker genes for early follicle activation are determined. These findings will help refine follicular classification and fertility preservation techniques across critical ages., (© 2024. The Author(s).)
- Published
- 2024
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13. Investigating the impact of vitrification on bovine ovarian tissue morphology, follicle survival, and transcriptomic signature.
- Author
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Deligiannis SP, Kask K, Modhukur V, Boskovic N, Ivask M, Jaakma Ü, Damdimopoulou P, Tuuri T, Velthut-Meikas A, and Salumets A
- Subjects
- Animals, Female, Cattle, Fertility Preservation methods, Cell Proliferation genetics, DNA Damage genetics, Vitrification, Ovarian Follicle growth & development, Ovarian Follicle metabolism, Cryopreservation methods, Transcriptome genetics, Ovary metabolism
- Abstract
Purpose: Ovarian tissue cryopreservation is vital for fertility preservation, yet its effect on ovarian tissue follicle survival and transcriptomic signature requires further investigation. This study delves into the effects of vitrification on tissue morphology, function, and transcriptomic changes, helping to find possibilities for vitrification protocol improvements., Methods: Ovarian cortex from 19 bovine animals were used to conduct pre- and post-vitrification culture followed by histological assessment, immunohistochemistry, and TUNEL assay. Follicles' functionality was assessed for viability and growth within the tissue and in isolated cultures. RNA-sequencing of ovarian tissue was used to explore the transcriptomic alterations caused by vitrification., Results: Follicle density, cell proliferation, and DNA damage in ovarian stroma were unaffected by vitrification. However, vitrified cultured tissue exhibited reduced follicle density of primordial/primary and antral follicles, while freshly cultured tissue manifested reduction of antral follicles. Increased stromal cell proliferation and DNA damage occurred in both groups post-culture. Isolated follicles from vitrified tissue exhibited similar viability to fresh follicles until day 4, after which the survival dropped. RNA-sequencing revealed minor effects of vitrification on transcriptomic signatures, while culture induced significant gene expression changes in both groups. The altered expression of WNT and hormonal regulation pathway genes post-vitrification suggests the molecular targets for vitrification protocol refinement., Conclusion: Vitrification minimally affects tissue morphology, follicle density, and transcriptomic signature post-thawing. However, culture revealed notable changes in vitrified tissue samples, including reduced follicle density, decreased isolated follicle survival, and alteration in WNT signalling and ovarian hormonal regulation pathways, highlighted them as possible limitations of the current vitrification protocol., (© 2024. The Author(s).)
- Published
- 2024
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14. Correction to: Induced Pluripotent Stem Cells as a Possible Approach for Exploring the Pathophysiology of Polycystic Ovary Syndrome (PCOS).
- Author
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Khatun M, Lundin K, Naillat F, Loog L, Saarela U, Tuuri T, Salumets A, Piltonen TT, and Tapanainen JS
- Published
- 2024
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15. Induced Pluripotent Stem Cells as a Possible Approach for Exploring the Pathophysiology of Polycystic Ovary Syndrome (PCOS).
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Khatun M, Lundin K, Naillat F, Loog L, Saarela U, Tuuri T, Salumets A, Piltonen TT, and Tapanainen JS
- Subjects
- Female, Humans, Genome-Wide Association Study, Cell Differentiation, Polycystic Ovary Syndrome genetics, Polycystic Ovary Syndrome metabolism, Polycystic Ovary Syndrome pathology, Induced Pluripotent Stem Cells metabolism
- Abstract
Polycystic ovary syndrome (PCOS) is the most prevalent endocrine condition among women with pleiotropic sequelae possessing reproductive, metabolic, and psychological characteristics. Although the exact origin of PCOS is elusive, it is known to be a complex multigenic disorder with a genetic, epigenetic, and environmental background. However, the pathogenesis of PCOS, and the role of genetic variants in increasing the risk of the condition, are still unknown due to the lack of an appropriate study model. Since the debut of induced pluripotent stem cell (iPSC) technology, the ability of reprogrammed somatic cells to self-renew and their potential for multidirectional differentiation have made them excellent tools to study different disease mechanisms. Recently, researchers have succeeded in establishing human in vitro PCOS disease models utilizing iPSC lines from heterogeneous PCOS patient groups (iPSC
PCOS ). The current review sets out to summarize, for the first time, our current knowledge of the implications and challenges of iPSC technology in comprehending PCOS pathogenesis and tissue-specific disease mechanisms. Additionally, we suggest that the analysis of polygenic risk prediction based on genome-wide association studies (GWAS) could, theoretically, be utilized when creating iPSC lines as an additional research tool to identify women who are genetically susceptible to PCOS. Taken together, iPSCPCOS may provide a new paradigm for the exploration of PCOS tissue-specific disease mechanisms., (© 2023. The Author(s).)- Published
- 2024
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16. Reference standards for follicular density in ovarian cortex from birth to sexual maturity.
- Author
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Hassan J, Knuus K, Lahtinen A, Rooda I, Otala M, Tuuri T, Gidlöf S, Edlund E, Menezes J, Malmros J, Byström P, Sundin M, Langenskiöld C, Vogt H, Frisk P, Petersen C, Damdimopoulou P, and Jahnukainen K
- Subjects
- Female, Humans, Aged, Infant, Child, Preschool, Child, Adolescent, Young Adult, Adult, Ovary, Reference Standards, Quality Control, Antineoplastic Agents, Alkylating, Turner Syndrome
- Abstract
Research Question: Are age-normalized reference values for human ovarian cortical follicular density adequate for tissue quality control in fertility preservation?, Design: Published quantitative data on the number of follicles in samples without known ovarian pathology were converted into cortical densities to create reference values. Next, a sample cohort of 126 girls (age 1-24 years, mean ± SD 11 ± 6) with cancer, severe haematological disease or Turner syndrome were used to calculate Z-scores for cortical follicular density based on the reference values., Results: No difference was observed between Z-scores in samples from untreated patients (0.3 ± 3.5, n = 30) and patients treated with (0.5 ± 2.9, n = 48) and without (0.1 ± 1.3, n = 6) alkylating chemotherapy. Z-scores were not correlated with increasing cumulative exposure to cytostatics. Nevertheless, Z-scores in young treated patients (0-2 years -2.1 ± 3.1, n = 10, P = 0.04) were significantly lower than Z-scores in older treated patients (11-19 years, 2 ± 1.9, n = 15). Samples from patients with Turner syndrome differed significantly from samples from untreated patients (-5.2 ± 5.1, n = 24, P = 0.003), and a Z-score of -1.7 was identified as a cut-off showing good diagnostic value for identification of patients with Turner syndrome with reduced ovarian reserve. When this cut-off was applied to other patients, analysis showed that those with indications for reduced ovarian reserve (n = 15) were significantly younger (5.9 ± 4.2 versus 10.7 ± 5.9 years, P = 0.004) and, when untreated, more often had non-malignant haematologic diseases compared with those with normal ovarian reserve (n = 24, 100% versus 19%, P = 0.009)., Conclusion: Z-scores allow the estimation of genetic- and treatment-related effects on follicular density in cortical tissue from young patients stored for fertility preservation. Understanding the quality of cryopreserved tissue facilitates its use during patient counselling. More research is needed regarding the cytostatic effects found in this study., (Copyright © 2023 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2023
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17. The intensities of vowels and plosive bursts and their impact on text intelligibility in singinga).
- Author
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Vurma A, Meister E, Meister L, Ross J, Raju M, Kala V, and Dede T
- Subjects
- Humans, Cognition, Recognition, Psychology, Software, Acoustics, Singing
- Abstract
In classical singing, there are often problems with the intelligibility of sung text. The present study aims to test the hypotheses that (1) in loud operatic singing, compared with speaking, the intensity of voiceless plosives increases less than the intensity of vowels, leading to poorer recognition of plosives; and (2) pronouncing the plosive bursts with greater intensity improves their recognition. The acoustic analysis of nine opera arias in Italian from the Classical and Romantic periods performed by ten classically trained singers showed that the average difference in the intensity of vowels when sung and spoken was 14.6 dB [standard deviation (SD) = 7.2 dB], while the difference in the intensity of voiceless plosive bursts was only 6.6 dB (SD = 6 dB). In a perception test with 73 participants, increasing the intensity of the plosive bursts generally improved the recognition of plosives in the sung /a-plosive-a/ sequences, but mainly when reverberation and/or pink noise imitating instrumental accompaniments were added to the stimuli. At the same time, recognition of plosives was often better than chance even when the plosive burst was missing and replaced by silence., (© 2023 Acoustical Society of America.)
- Published
- 2023
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18. CRISPR/Cas9-mediated activation of NR5A1 steers female human embryonic stem cell-derived bipotential gonadal-like cells towards a steroidogenic cell fate.
- Author
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Danti L, Lundin K, Sepponen K, Yohannes DA, Kere J, Tuuri T, and Tapanainen JS
- Subjects
- Animals, Humans, Female, Male, CRISPR-Cas Systems, Steroidogenic Factor 1 genetics, Cell Differentiation genetics, Cytochrome P450 Family 17, Human Embryonic Stem Cells
- Abstract
The nuclear receptor subfamily 5 group A member 1 (NR5A1), encoding steroidogenic factor 1 (SF-1), has been identified as a critical factor in gonadal development in animal studies. A previous study of ours suggested that upregulation of NR5A1 during early gonadal differentiation in male (46,XY) human pluripotent stem cells steers the cells into a more mature gonadal cell type. However, the detailed role of NR5A1 in female gonadal differentiation has yet to be determined. In this study, by combining the processes of gonadal differentiation and conditional gene activation, we show that NR5A1 induction predominantly upregulates the female gonadal marker inhibin subunit α (INHA) and steroidogenic markers steroidogenic acute regulatory protein (STAR), cytochrome P450 family 11 subfamily A member 1 (CYP11A1), cytochrome P450 family 17 subfamily A member 1 (CYP17A1), hydroxy-delta-5-steroid dehydrogenase (HSD3B2) and hydroxysteroid 17-beta dehydrogenase 1 (HSD17B1). In contrast, NR5A1 induction did not seem to affect the bipotential gonadal markers gata binding protein 4 (GATA4) and Wilms' tumour suppressor 1 (WT1) nor the female gonadal markers r-spondin 1 (RSPO1) and wnt family member 4 (WNT4). Differentially expressed genes were highly associated with adrenal and ovarian steroidogenesis pathways. Moreover, time-series analysis revealed different dynamic changes between male and female induced samples, where continuously upregulated genes in female gonadal differentiation were mostly associated with adrenal steroidogenesis. Thus, in contrast to male gonadal differentiation, NR5A1 is necessary but not sufficient to steer human embryonic stem cell (hESC)-derived bipotential gonadal-like cells towards a more mature somatic, female cell fate. Instead, it seems to direct bipotential gonadal-like cells more towards a steroidogenic-like cell population. The information obtained in this study helps in elucidating the role of NR5A1 in gonadal differentiation of a female stem cell line., (© 2023. BioMed Central Ltd., part of Springer Nature.)
- Published
- 2023
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19. Deciphering the Transcriptional Landscape of Human Pluripotent Stem Cell-Derived GnRH Neurons: The Role of Wnt Signaling in Patterning the Neural Fate.
- Author
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Wang Y, Madhusudan S, Cotellessa L, Kvist J, Eskici N, Yellapragada V, Pulli K, Lund C, Vaaralahti K, Tuuri T, Giacobini P, and Raivio T
- Subjects
- Humans, Wnt Signaling Pathway genetics, Neurons metabolism, Cell Differentiation genetics, Gonadotropin-Releasing Hormone genetics, Gonadotropin-Releasing Hormone metabolism, Pluripotent Stem Cells metabolism
- Abstract
Hypothalamic gonadotropin-releasing hormone (GnRH) neurons lay the foundation for human development and reproduction; however, the critical cell populations and the entangled mechanisms underlying the development of human GnRH neurons remain poorly understood. Here, by using our established human pluripotent stem cell-derived GnRH neuron model, we decoded the cellular heterogeneity and differentiation trajectories at the single-cell level. We found that a glutamatergic neuron population, which generated together with GnRH neurons, showed similar transcriptomic properties with olfactory sensory neuron and provided the migratory path for GnRH neurons. Through trajectory analysis, we identified a specific gene module activated along the GnRH neuron differentiation lineage, and we examined one of the transcription factors, DLX5, expression in human fetal GnRH neurons. Furthermore, we found that Wnt inhibition could increase DLX5 expression and improve the GnRH neuron differentiation efficiency through promoting neurogenesis and switching the differentiation fates of neural progenitors into glutamatergic neurons/GnRH neurons. Our research comprehensively reveals the dynamic cell population transition and gene regulatory network during GnRH neuron differentiation., (© The Author(s) 2022. Published by Oxford University Press.)
- Published
- 2022
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20. Steroidogenic factor 1 (NR5A1) induces multiple transcriptional changes during differentiation of human gonadal-like cells.
- Author
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Sepponen K, Lundin K, Yohannes DA, Vuoristo S, Balboa D, Poutanen M, Ohlsson C, Hustad S, Bifulco E, Paloviita P, Otonkoski T, Ritvos O, Sainio K, Tapanainen JS, and Tuuri T
- Subjects
- Humans, Male, Steroidogenic Factor 1 genetics, Steroidogenic Factor 1 metabolism, Mutation, Gonads metabolism, Scavenger Receptors, Class A genetics, Induced Pluripotent Stem Cells metabolism, Infertility
- Abstract
Nuclear receptor subfamily 5 group A member 1 (NR5A1) encodes steroidogenic factor 1 (SF1), a key regulatory factor that determines gonadal development and coordinates endocrine functions. Here, we have established a stem cell-based model of human gonadal development and applied it to evaluate the effects of NR5A1 during the transition from bipotential gonad to testicular cells. We combined directed differentiation of human induced pluripotent stem cells (46,XY) with activation of endogenous NR5A1 expression by conditionally-inducible CRISPR activation. The resulting male gonadal-like cells expressed several Sertoli cell transcripts, secreted anti-Müllerian hormone and responded to follicle-stimulating hormone by producing sex steroid intermediates. These characteristics were not induced without NR5A1 activation. A total of 2691 differentially expressed genetic elements, including both coding and non-coding RNAs, were detected immediately following activation of NR5A1 expression. Of those, we identified novel gonad-related putative NR5A1 targets, such as SCARA5, which we validated also by immunocytochemistry. In addition, NR5A1 activation was associated with dynamic expression of multiple gonad- and infertility-related differentially expressed genes. In conclusion, by combining targeted differentiation and endogenous activation of NR5A1 we have for the first time, been able to examine in detail the effects of NR5A1 in early human gonadal cells. The model and results obtained provide a useful resource for future investigations exploring the causative reasons for gonadal dysgenesis and infertility in humans., Competing Interests: Declaration of competing interest none., (Copyright © 2022 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2022
- Full Text
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21. FGF8-FGFR1 signaling regulates human GnRH neuron differentiation in a time- and dose-dependent manner.
- Author
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Yellapragada V, Eskici N, Wang Y, Madhusudan S, Vaaralahti K, Tuuri T, and Raivio T
- Subjects
- Fibroblast Growth Factor 8 metabolism, Fibroblast Growth Factor 8 pharmacology, Forkhead Transcription Factors metabolism, Humans, Intracellular Signaling Peptides and Proteins metabolism, Membrane Proteins metabolism, Nerve Tissue Proteins metabolism, Neurogenesis, Neurons metabolism, Gonadotropin-Releasing Hormone metabolism, Gonadotropin-Releasing Hormone pharmacology, Receptor, Fibroblast Growth Factor, Type 1 genetics, Receptor, Fibroblast Growth Factor, Type 1 metabolism
- Abstract
Fibroblast growth factor 8 (FGF8), acting through the fibroblast growth factor receptor 1 (FGFR1), has an important role in the development of gonadotropin-releasing hormone-expressing neurons (GnRH neurons). We hypothesized that FGF8 regulates differentiation of human GnRH neurons in a time- and dose-dependent manner via FGFR1. To investigate this further, human pluripotent stem cells were differentiated during 10 days of dual-SMAD inhibition into neural progenitor cells, followed either by treatment with FGF8 at different concentrations (25 ng/ml, 50 ng/ml or 100 ng/ml) for 10 days or by treatment with 100 ng/ml FGF8 for different durations (2, 4, 6 or 10 days); cells were then matured through DAPT-induced inhibition of Notch signaling for 5 days into GnRH neurons. FGF8 induced expression of GNRH1 in a dose-dependent fashion and the duration of FGF8 exposure correlated positively with gene expression of GNRH1 (P<0.05, Rs=0.49). However, cells treated with 100 ng/ml FGF8 for 2 days induced the expression of genes, such as FOXG1, ETV5 and SPRY2, and continued FGF8 treatment induced the dynamic expression of several other genes. Moreover, during exposure to FGF8, FGFR1 localized to the cell surface and its specific inhibition with the FGFR1 inhibitor PD166866 reduced expression of GNRH1 (P<0.05). In neurons, FGFR1 also localized to the nucleus. Our results suggest that dose- and time-dependent FGF8 signaling via FGFR1 is indispensable for human GnRH neuron ontogeny. This article has an associated First Person interview with the first author of the paper., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2022. Published by The Company of Biologists Ltd.)
- Published
- 2022
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22. Proteome-wide and matrisome-specific atlas of the human ovary computes fertility biomarker candidates and open the way for precision oncofertility.
- Author
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Ouni E, Nedbal V, Da Pian M, Cao H, Haas KT, Peaucelle A, Van Kerk O, Herinckx G, Marbaix E, Dolmans MM, Tuuri T, Otala M, Amorim CA, and Vertommen D
- Subjects
- Biomarkers, Extracellular Matrix Proteins metabolism, Female, Fertility, Humans, Ovary chemistry, Ovary metabolism, Pregnancy, Proteome genetics, Proteomics methods, Fertility Preservation, Infertility
- Abstract
Our modern era is witnessing an increasing infertility rate worldwide. Although some of the causes can be attributed to our modern lifestyle (e.g., persistent organic pollutants, late pregnancy), our knowledge of the human ovarian tissue has remained limited and insufficient to reverse the infertility statistics. Indeed, all efforts have been focused on the endocrine and cellular function in support of the cell theory that dates back to the 18th century, while the human ovarian matrisome is still under-described. Hereby, we unveil the extracellular side of the story during different periods of the ovary life, demonstrating that follicle survival and development, and ultimately fertility, would not be possible without its involvement. We examined the human ovarian matrisome and described its remodeling from prepuberty until menopause, creating the first ovarian proteomic codex. Here, we confidently identified and quantified 98 matrisome proteins present in the three ovary groups. Among them, 26 were expressed differently among age groups, delineating a peculiar matrisomal fingerprint at each stage. Such proteins could be potential biomarkers phenotyping ovarian ECM at each age phase of female reproductive life. Beyond proteomics, our study presents a unique approach to understanding the data and depicting the spatiotemporal ECM-intracellular signaling networks and remodeling with age through imaging, advanced text-mining based on natural language processing technology, machine learning, and data sonification. Our findings provide essential context for healthy ovarian physiology, identifying and characterizing disease states, and recapitulating physiological tissues or development in vitro. This comprehensive proteomics analysis represents the ovarian proteomic codex and contributes to an improved understanding of the critical roles that ECM plays throughout the ovarian life span., Competing Interests: Declaration of competing interests All authors have no competing interests to declare, (Copyright © 2022 Elsevier B.V. All rights reserved.)
- Published
- 2022
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23. DUX4 is a multifunctional factor priming human embryonic genome activation.
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Vuoristo S, Bhagat S, Hydén-Granskog C, Yoshihara M, Gawriyski L, Jouhilahti EM, Ranga V, Tamirat M, Huhtala M, Kirjanov I, Nykänen S, Krjutškov K, Damdimopoulos A, Weltner J, Hashimoto K, Recher G, Ezer S, Paluoja P, Paloviita P, Takegami Y, Kanemaru A, Lundin K, Airenne TT, Otonkoski T, Tapanainen JS, Kawaji H, Murakawa Y, Bürglin TR, Varjosalo M, Johnson MS, Tuuri T, Katayama S, and Kere J
- Abstract
Double homeobox 4 ( DUX4 ) is expressed at the early pre-implantation stage in human embryos. Here we show that induced human DUX4 expression substantially alters the chromatin accessibility of non-coding DNA and activates thousands of newly identified transcribed enhancer-like regions, preferentially located within ERVL-MaLR repeat elements. CRISPR activation of transcribed enhancers by C-terminal DUX4 motifs results in the increased expression of target embryonic genome activation (EGA) genes ZSCAN4 and KHDC1P1 . We show that DUX4 is markedly enriched in human zygotes, followed by intense nuclear DUX4 localization preceding and coinciding with minor EGA. DUX4 knockdown in human zygotes led to changes in the EGA transcriptome but did not terminate the embryos. We also show that the DUX4 protein interacts with the Mediator complex via the C-terminal KIX binding motif. Our findings contribute to the understanding of DUX4 as a regulator of the non-coding genome., Competing Interests: Y.T. and A.K. are employees of K.K.DNAFORM. Y. T. and Y. M. are inventors on a patent related to NET-CAGE technology., (© 2022 The Authors.)
- Published
- 2022
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24. A blueprint of the topology and mechanics of the human ovary for next-generation bioengineering and diagnosis.
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Ouni E, Peaucelle A, Haas KT, Van Kerk O, Dolmans MM, Tuuri T, Otala M, and Amorim CA
- Subjects
- Adult, Age Factors, Aged, Bioengineering, Child, Child, Preschool, Elastic Tissue anatomy & histology, Elastic Tissue metabolism, Elasticity, Extracellular Matrix chemistry, Extracellular Matrix metabolism, Female, Hormones metabolism, Humans, Middle Aged, Ovarian Follicle growth & development, Ovarian Reserve, Ovary cytology, Viscosity, Young Adult, Ovary anatomy & histology, Ovary physiology
- Abstract
Although the first dissection of the human ovary dates back to the 17
th century, the biophysical characteristics of the ovarian cell microenvironment are still poorly understood. However, this information is vital to deciphering cellular processes such as proliferation, morphology and differentiation, as well as pathologies like tumor progression, as demonstrated in other biological tissues. Here, we provide the first readout of human ovarian fiber morphology, interstitial and perifollicular fiber orientation, pore geometry, topography and surface roughness, and elastic and viscoelastic properties. By determining differences between healthy prepubertal, reproductive-age, and menopausal ovarian tissue, we unravel and elucidate a unique biophysical phenotype of reproductive-age tissue, bridging biophysics and female fertility. While these data enable to design of more biomimetic scaffolds for the tissue-engineered ovary, our analysis pipeline is applicable for the characterization of other organs in physiological or pathological states to reveal their biophysical markers or design their bioinspired analogs., (© 2021. The Author(s).)- Published
- 2021
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25. Small RNA expression and miRNA modification dynamics in human oocytes and early embryos.
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Paloviita P, Hydén-Granskog C, Yohannes DA, Paluoja P, Kere J, Tapanainen JS, Krjutškov K, Tuuri T, Võsa U, and Vuoristo S
- Subjects
- Embryo, Mammalian metabolism, Humans, Oocytes metabolism, Sequence Analysis, RNA methods, Zygote metabolism, MicroRNAs genetics, MicroRNAs metabolism
- Abstract
Small noncoding RNAs (sRNAs) play important roles during the oocyte-to-embryo transition (OET), when the maternal phenotype is reprogrammed and the embryo genome is gradually activated. The transcriptional program driving early human development has been studied with the focus mainly on protein-coding RNAs, and expression dynamics of sRNAs remain largely unexplored. We profiled sRNAs in human oocytes and early embryos using an RNA-sequencing (RNA-seq) method suitable for low inputs of material. We show that OET in humans is temporally coupled with the transition from predominant expression of oocyte short piRNAs (os-piRNAs) in oocytes, to activation of microRNA (miRNA) expression in cleavage stage embryos. Additionally, 3' mono- and oligoadenylation of miRNAs is markedly increased in zygotes. We hypothesize that this may modulate the function or stability of maternal miRNAs, some of which are retained throughout the first cell divisions in embryos. This study is the first of its kind elucidating the dynamics of sRNA expression and miRNA modification along a continuous trajectory of early human development and provides a valuable data set for in-depth interpretative analyses., (© 2021 Paloviita et al.; Published by Cold Spring Harbor Laboratory Press.)
- Published
- 2021
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26. Characterization of the human GnRH neuron developmental transcriptome using a GNRH1 -TdTomato reporter line in human pluripotent stem cells.
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Lund C, Yellapragada V, Vuoristo S, Balboa D, Trova S, Allet C, Eskici N, Pulli K, Giacobini P, Tuuri T, and Raivio T
- Subjects
- CRISPR-Associated Protein 9 metabolism, CRISPR-Cas Systems genetics, Cell Line, Fetus cytology, Fibroblast Growth Factor 8 pharmacology, Humans, Hypogonadism genetics, LIM-Homeodomain Proteins metabolism, Neurons drug effects, Pluripotent Stem Cells drug effects, RNA, Messenger genetics, RNA, Messenger metabolism, Transcription Factors metabolism, Up-Regulation drug effects, Up-Regulation genetics, Genes, Reporter, Gonadotropin-Releasing Hormone metabolism, Neurons metabolism, Pluripotent Stem Cells metabolism, Transcriptome genetics
- Abstract
Gonadotropin-releasing hormone (GnRH) neurons provide a fundamental signal for the onset of puberty and subsequent reproductive functions by secretion of gonadotropin-releasing hormone. Their disrupted development or function leads to congenital hypogonadotropic hypogonadism (CHH). To model the development of human GnRH neurons, we generated a stable GNRH1 -TdTomato reporter cell line in human pluripotent stem cells (hPSCs) using CRISPR-Cas9 genome editing. RNA-sequencing of the reporter clone, differentiated into GnRH neurons by dual SMAD inhibition and FGF8 treatment, revealed 6461 differentially expressed genes between progenitors and GnRH neurons. Expression of the transcription factor ISL1 , one of the top 50 most upregulated genes in the TdTomato-expressing GnRH neurons, was confirmed in 10.5 gestational week-old human fetal GnRH neurons. Among the differentially expressed genes, we detected 15 genes that are implicated in CHH and several genes that are implicated in human puberty timing. Finally, FGF8 treatment in the neuronal progenitor pool led to upregulation of 37 genes expressed both in progenitors and in TdTomato-expressing GnRH neurons, which suggests upstream regulation of these genes by FGF8 signaling during GnRH neuron differentiation. These results illustrate how hPSC-derived human GnRH neuron transcriptomic analysis can be utilized to dissect signaling pathways and gene regulatory networks involved in human GnRH neuron development.This article has an associated First Person interview with the first author of the paper., Competing Interests: Competing interestsThe authors declare no competing or financial interests., (© 2020. Published by The Company of Biologists Ltd.)
- Published
- 2020
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27. Complement in Human Pre-implantation Embryos: Attack and Defense.
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Reichhardt MP, Lundin K, Lokki AI, Recher G, Vuoristo S, Katayama S, Tapanainen JS, Kere J, Meri S, and Tuuri T
- Subjects
- Gene Expression Regulation, Developmental, Humans, Microscopy, Confocal, Sequence Analysis, RNA, Single-Cell Analysis, Complement System Proteins immunology, Embryo, Mammalian immunology, Embryonic Development immunology
- Abstract
It is essential for early human life that mucosal immunological responses to developing embryos are tightly regulated. An imbalance of the complement system is a common feature of pregnancy complications. We hereby present the first full analysis of the expression and deposition of complement molecules in human pre-implantation embryos. Thus, far, immunological imbalance has been considered in stages of pregnancy following implantation. We here show that complement activation against developing human embryos takes place already at the pre-implantation stage. Using confocal microscopy, we observed deposition of activation products on healthy developing embryos, which highlights the need for strict complement regulation. We show that embryos express complement membrane inhibitors and bind soluble regulators. These findings show that mucosal complement targets human embryos, and indicate potential adverse pregnancy outcomes, if regulation of activation fails. In addition, single-cell RNA sequencing revealed cellular expression of complement activators. This shows that the embryonic cells themselves have the capacity to express and activate C3 and C5. The specific local embryonic expression of complement components, regulators, and deposition of activation products on the surface of embryos suggests that complement has immunoregulatory functions and furthermore may impact cellular homeostasis and differentiation at the earliest stages of life., (Copyright © 2019 Reichhardt, Lundin, Lokki, Recher, Vuoristo, Katayama, Tapanainen, Kere, Meri and Tuuri.)
- Published
- 2019
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28. MKRN3 Interacts With Several Proteins Implicated in Puberty Timing but Does Not Influence GNRH1 Expression.
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Yellapragada V, Liu X, Lund C, Känsäkoski J, Pulli K, Vuoristo S, Lundin K, Tuuri T, Varjosalo M, and Raivio T
- Abstract
Paternally-inherited loss-of-function mutations in makorin ring finger protein 3 gene ( MKRN3 ) underlie central precocious puberty. To investigate the puberty-related mechanism(s) of MKRN3 in humans, we generated two distinct bi-allelic MKRN3 knock-out human pluripotent stem cell lines, Del 1 and Del 2, and differentiated them into GNRH1 -expressing neurons. Both Del 1 and Del 2 clones could be differentiated into neuronal progenitors and GNRH1 -expressing neurons, however, the relative expression of GNRH1 did not differ from wild type cells ( P = NS). Subsequently, we investigated stable and dynamic protein-protein interaction (PPI) partners of MKRN3 by stably expressing it in HEK cells followed by mass spectrometry analyses. We found 81 high-confidence novel protein interaction partners, which are implicated in cellular processes such as insulin signaling, RNA metabolism and cell-cell adhesion. Of the identified interactors, 20 have been previously implicated in puberty timing. In conclusion, our stem cell model for generation of GNRH1 -expressing neurons did not offer mechanistic insight for the role of MKRN3 in puberty initiation. The PPI data, however, indicate that MKRN3 may regulate puberty by interacting with other puberty-related proteins. Further studies are required to elucidate the possible mechanisms and outcomes of these interactions.
- Published
- 2019
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29. Hyperglycosylated hCG activates LH/hCG-receptor with lower activity than hCG.
- Author
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Koistinen H, Koel M, Peters M, Rinken A, Lundin K, Tuuri T, Tapanainen JS, Alfthan H, Salumets A, Stenman UH, and Lavogina D
- Subjects
- Animals, Chorionic Gonadotropin, beta Subunit, Human pharmacology, Dogs, Glycosylation, Humans, Madin Darby Canine Kidney Cells, Chorionic Gonadotropin pharmacology, Luteinizing Hormone metabolism, Receptors, LH metabolism
- Abstract
While human chorionic gonadotropin (hCG) appears to have an essential role in early pregnancy, it is controversial whether the hyperglycosylated form of hCG (hCG-h), which is the major hCG isoform during the first 4-5 weeks of pregnancy, is able to activate LH/hCG receptor (LHCGR). To address this, we utilized different extensively characterized hCG and hCGβ reference reagents, cell culture- and urine-derived hCG-h preparations, and an in vitro reporter system for LHCGR activation. The WHO hCG reference reagent (99/688) was found to activate LHCGR with an EC
50 -value of 3.3 ± 0.6 pmol/L (n = 9). All three studied hCG-h preparations were also able to activate LHCGR, but with a lower potency (EC50 -values between 7.1 ± 0.5 and 14 ± 3 pmol/L, n = 5-11, for all P < 0.05 as compared to the hCG reference). The activities of commercial urinary hCG (Pregnyl) and recombinant hCG (Ovitrelle) preparations were intermediate between those of the hCG reference and the hCG-h. These results strongly suggest that the hCG-h is functionally similar to hCG, although it has lower potency for LHCGR activation. Whether this explains the reduced proportion of hCG-h to hCG reported in patients developing early onset pre-eclampsia or those having early pregnancy loss remains to be determined., (Copyright © 2018 The Author(s). Published by Elsevier B.V. All rights reserved.)- Published
- 2019
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30. Demographic and evolutionary trends in ovarian function and aging.
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Laisk T, Tšuiko O, Jatsenko T, Hõrak P, Otala M, Lahdenperä M, Lummaa V, Tuuri T, Salumets A, and Tapanainen JS
- Subjects
- Animals, Cellular Senescence physiology, Demography, Female, Humans, Menopause physiology, Ovarian Reserve physiology, Reproduction physiology, Aging physiology, Biological Evolution, Ovary physiology
- Abstract
Background: The human female reproductive lifespan is regulated by the dynamics of ovarian function, which in turn is influenced by several factors: from the basic molecular biological mechanisms governing folliculogenesis, to environmental and lifestyle factors affecting the ovarian reserve between conception and menopause. From a broader point of view, global and regional demographic trends play an additional important role in shaping the female reproductive lifespan, and finally, influences on an evolutionary scale have led to the reproductive senescence that precedes somatic senescence in humans., Objective and Rationale: The narrative review covers reproductive medicine, by integrating the molecular mechanisms of ovarian function and aging with short-term demographic and long-term evolutionary trends., Search Methods: PubMed and Google Scholar searches were performed with relevant keywords (menopause, folliculogenesis, reproductive aging, reproductive lifespan and life history theory). The reviewed articles and their references were restricted to those written in English., Outcomes: We discuss and summarize the rapidly accumulating information from large-scale population-based and single-reproductive-cell genomic studies, their constraints and advantages in the context of female reproductive aging as well as their possible evolutionary significance on the life history trajectory from foetal-stage folliculogenesis until cessation of ovarian function in menopause. The relevant environmental and lifestyle factors and demographic trends are also discussed in the framework of predominant evolutionary hypotheses explaining the origin and maintenance of menopause., Wider Implications: The high speed at which new data are generated has so far raised more questions than it has provided solid answers and has been paralleled by a lack of satisfactory interpretations of the findings in the context of human life history theory. Therefore, the recent flood of data could offer an unprecedented tool for future research to possibly confirm or rewrite human evolutionary reproductive history, at the same time providing novel grounds for patient counselling and family planning strategies.
- Published
- 2019
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31. rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology.
- Author
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Marjonen H, Auvinen P, Kahila H, Tšuiko O, Kõks S, Tiirats A, Viltrop T, Tuuri T, Söderström-Anttila V, Suikkari AM, Salumets A, Tiitinen A, and Kaminen-Ahola N
- Subjects
- Adult, Binding Sites, CCCTC-Binding Factor metabolism, Case-Control Studies, Estonia, Female, Finland, Genotype, Humans, Infant, Newborn, Insulin-Like Growth Factor II genetics, Male, Maternal Age, Placenta chemistry, Pregnancy, RNA, Long Noncoding chemistry, RNA, Long Noncoding metabolism, Reproductive Techniques, Assisted, Birth Weight genetics, DNA Methylation, Genomic Imprinting, Polymorphism, Single Nucleotide, RNA, Long Noncoding genetics
- Abstract
Background: Assisted reproductive technology (ART) has been associated with low birth weight of fresh embryo transfer (FRESH) derived and increased birth weight of frozen embryo transfer (FET)-derived newborns. Owing to that, we focused on imprinted insulin-like growth factor 2 ( IGF2 )/ H19 locus known to be important for normal growth. This locus is regulated by H19 imprinting control region (ICR) with seven binding sites for the methylation-sensitive zinc finger regulatory protein (CTCF). A polymorphism rs10732516 G/A in the sixth binding site for CTCF, associates with a genotype-specific trend to the DNA methylation. Due to this association, 62 couples with singleton pregnancies derived from FRESH (44 IVF/18 ICSI), 24 couples from FET (15 IVF/9 ICSI), and 157 couples with spontaneously conceived pregnancies as controls were recruited in Finland and Estonia for genotype-specific examination. DNA methylation levels at the H19 ICR, H19 DMR, and long interspersed nuclear elements in placental tissue were explored by MassARRAY EpiTYPER ( n = 122). Allele-specific changes in the methylation level of H19 ICR in placental tissue ( n = 26) and white blood cells (WBC, n = 8) were examined by bisulfite sequencing. Newborns' ( n = 243) anthropometrics was analyzed by using international growth standards., Results: A consistent trend of genotype-specific decreased methylation level was observed in paternal allele of rs10732516 paternal A/maternal G genotype, but not in paternal G/maternal A genotype, at H19 ICR in ART placentas. This hypomethylation was not detected in WBCs. Also genotype-specific differences in FRESH-derived newborns' birth weight and head circumference were observed ( P = 0.04, P = 0.004, respectively): FRESH-derived newborns with G/G genotype were heavier ( P = 0.04) and had larger head circumference ( P = 0.002) compared to newborns with A/A genotype. Also, the placental weight and birth weight of controls, FRESH- and FET-derived newborns differed significantly in rs10732516 A/A genotype ( P = 0.024, P = 0.006, respectively): the placentas and newborns of FET-derived pregnancies were heavier compared to FRESH-derived pregnancies ( P = 0.02, P = 0.004, respectively)., Conclusions: The observed DNA methylation changes together with the phenotypic findings suggest that rs10732516 polymorphism associates with the effects of ART in a parent-of-origin manner. Therefore, this polymorphism should be considered when the effects of environmental factors on embryonic development are studied., Competing Interests: The study was approved by the Ethics Committee of Helsinki University Central Hospital (386/13/03/03/2012 and 285/13/03/03/2013) and Research Ethics Committee of the University of Tartu (256/M-17). Informed consent was obtained from all participants.The authors declare that they have no competing interests.Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
- Published
- 2018
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32. The Role of Sequential BMP Signaling in Directing Human Embryonic Stem Cells to Bipotential Gonadal Cells.
- Author
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Sepponen K, Lundin K, Knuus K, Väyrynen P, Raivio T, Tapanainen JS, and Tuuri T
- Subjects
- Activins pharmacology, Bone Morphogenetic Protein 7 genetics, Bone Morphogenetic Proteins pharmacology, Cells, Cultured, Embryonic Stem Cells drug effects, Gene Expression Regulation drug effects, Gonads drug effects, Humans, Pyridines pharmacology, Pyrimidines pharmacology, Signal Transduction drug effects, Signal Transduction physiology, Wnt Signaling Pathway drug effects, Wnt Signaling Pathway genetics, Bone Morphogenetic Proteins physiology, Cell Differentiation drug effects, Cell Differentiation genetics, Embryonic Stem Cells physiology, Gonads cytology, Gonads physiology
- Abstract
Context: Human gonads arise as a pair of epithelial ridges on the surface of intermediate mesoderm (IM)-derived mesonephros. Toxic environmental factors and mutations in various genes are known to disturb normal gonadal development, but because of a lack of suitable in vitro models, detailed studies characterizing the molecular basis of the observed defects have not been performed., Objective: To establish an in vitro method for studying differentiation of bipotential gonadal progenitors by using human embryonic stem cells (hESCs) and to investigate the role of bone morphogenetic protein (BMP) in gonadal differentiation., Design: We tested 17 protocols using activin A, CHIR-99021, and varying durations of BMP-7 and the BMP inhibitor dorsomorphin. Activation of activin A, WNT, and BMP pathways was optimized to induce differentiation., Setting: Academic research laboratory., Main Outcomes Measures: Cell differentiation, gene expression, and flow cytometry., Results: The two most efficient protocols consistently upregulated IM markers LHX1, PAX2, and OSR1 at days 2 to 4 and bipotential gonadal markers EMX2, GATA4, WT1, and LHX9 at day 8 of culture. The outcome depended on the combination of the duration, concentration, and type of BMP activation and the length of WNT signaling. Adjusting any of the parameters substantially affected the requirements for other parameters., Conclusions: We have established a reproducible protocol for directed differentiation of hESCs into bipotential gonadal cells. The protocol can be used to model early gonadal development in humans and allows further differentiation to mature gonadal somatic cells., (Copyright © 2017 Endocrine Society)
- Published
- 2017
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33. Optimizing bone morphogenic protein 4-mediated human embryonic stem cell differentiation into trophoblast-like cells using fibroblast growth factor 2 and transforming growth factor-β/activin/nodal signalling inhibition.
- Author
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Koel M, Võsa U, Krjutškov K, Einarsdottir E, Kere J, Tapanainen J, Katayama S, Ingerpuu S, Jaks V, Stenman UH, Lundin K, Tuuri T, and Salumets A
- Subjects
- Activins genetics, Activins metabolism, Cell Culture Techniques methods, Cell Differentiation genetics, Cells, Cultured, Down-Regulation drug effects, Down-Regulation genetics, Fibroblast Growth Factor 2 genetics, Fibroblast Growth Factor 2 metabolism, Human Embryonic Stem Cells physiology, Humans, Nodal Protein genetics, Nodal Protein metabolism, Signal Transduction drug effects, Signal Transduction genetics, Transforming Growth Factor beta genetics, Transforming Growth Factor beta metabolism, Trophoblasts physiology, Bone Morphogenetic Protein 4 pharmacology, Cell Differentiation drug effects, Human Embryonic Stem Cells drug effects, Trophoblasts drug effects
- Abstract
Several studies have demonstrated that human embryonic stem cells (hESC) can be differentiated into trophoblast-like cells if exposed to bone morphogenic protein 4 (BMP4) and/or inhibitors of fibroblast growth factor 2 (FGF2) and the transforming growth factor beta (TGF-β)/activin/nodal signalling pathways. The goal of this study was to investigate how the inhibitors of these pathways improve the efficiency of hESC differentiation when compared with basic BMP4 treatment. RNA sequencing was used to analyse the effects of all possible inhibitor combinations on the differentiation of hESC into trophoblast-like cells over 12 days. Genes differentially expressed compared with untreated cells were identified at seven time points. Additionally, expression of total human chorionic gonadotrophin (HCG) and its hyperglycosylated form (HCG-H) were determined by immunoassay from cell culture media. We showed that FGF2 inhibition with BMP4 activation up-regulates syncytiotrophoblast-specific genes (CGA, CGB and LGALS16), induces several molecular pathways involved in embryo implantation and triggers HCG-H production. In contrast, inhibition of the TGF-β/activin/nodal pathway decreases the ability of hESC to form trophoblast-like cells. Information about the conditions needed for hESC differentiation toward trophoblast-like cells helps us to find an optimal model for studying the early development of human trophoblasts in normal and in complicated pregnancy., (Copyright © 2017 Reproductive Healthcare Ltd. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2017
- Full Text
- View/download PDF
34. Development of Gonadotropin-Releasing Hormone-Secreting Neurons from Human Pluripotent Stem Cells.
- Author
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Lund C, Pulli K, Yellapragada V, Giacobini P, Lundin K, Vuoristo S, Tuuri T, Noisa P, and Raivio T
- Subjects
- Cell Line, Cell Movement drug effects, Cell Proliferation drug effects, Fibroblast Growth Factor 8 pharmacology, Forkhead Transcription Factors metabolism, Humans, Nerve Tissue Proteins metabolism, Neural Stem Cells cytology, Neural Stem Cells drug effects, Neural Stem Cells metabolism, Neurons drug effects, Nose cytology, Pluripotent Stem Cells metabolism, Receptors, Notch metabolism, Smad Proteins antagonists & inhibitors, Smad Proteins metabolism, Gonadotropin-Releasing Hormone metabolism, Neurons cytology, Neurons metabolism, Pluripotent Stem Cells cytology
- Abstract
Gonadotropin-releasing hormone (GnRH) neurons regulate human puberty and reproduction. Modeling their development and function in vitro would be of interest for both basic research and clinical translation. Here, we report a three-step protocol to differentiate human pluripotent stem cells (hPSCs) into GnRH-secreting neurons. Firstly, hPSCs were differentiated to FOXG1, EMX2, and PAX6 expressing anterior neural progenitor cells (NPCs) by dual SMAD inhibition. Secondly, NPCs were treated for 10 days with FGF8, which is a key ligand implicated in GnRH neuron ontogeny, and finally, the cells were matured with Notch inhibitor to bipolar TUJ1-positive neurons that robustly expressed GNRH1 and secreted GnRH decapeptide into the culture medium. The protocol was reproducible both in human embryonic stem cells and induced pluripotent stem cells, and thus provides a translational tool for investigating the mechanisms of human puberty and its disorders., (Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
35. Selective microRNA-Offset RNA expression in human embryonic stem cells.
- Author
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Asikainen S, Heikkinen L, Juhila J, Holm F, Weltner J, Trokovic R, Mikkola M, Toivonen S, Balboa D, Lampela R, Icay K, Tuuri T, Otonkoski T, Wong G, and Hovatta O
- Subjects
- Base Sequence, Binding Sites, Cell Line, Computational Biology, Gene Expression Profiling, Gene Library, High-Throughput Nucleotide Sequencing, Humans, MicroRNAs chemistry, Molecular Sequence Annotation, Molecular Sequence Data, RNA, Small Untranslated chemistry, Sequence Alignment, Gene Expression, Human Embryonic Stem Cells metabolism, MicroRNAs genetics, RNA, Small Untranslated genetics
- Abstract
Small RNA molecules, including microRNAs (miRNAs), play critical roles in regulating pluripotency, proliferation and differentiation of embryonic stem cells. miRNA-offset RNAs (moRNAs) are similar in length to miRNAs, align to miRNA precursor (pre-miRNA) loci and are therefore believed to derive from processing of the pre-miRNA hairpin sequence. Recent next generation sequencing (NGS) studies have reported the presence of moRNAs in human neurons and cancer cells and in several tissues in mouse, including pluripotent stem cells. In order to gain additional knowledge about human moRNAs and their putative development-related expression, we applied NGS of small RNAs in human embryonic stem cells (hESCs) and fibroblasts. We found that certain moRNA isoforms are notably expressed in hESCs from loci coding for stem cell-selective or cancer-related miRNA clusters. In contrast, we observed only sparse moRNAs in fibroblasts. Consistent with earlier findings, most of the observed moRNAs derived from conserved loci and their expression did not appear to correlate with the expression of the adjacent miRNAs. We provide here the first report of moRNAs in hESCs, and their expression profile in comparison to fibroblasts. Moreover, we expand the repertoire of hESC miRNAs. These findings provide an expansion on the known repertoire of small non-coding RNA contents in hESCs.
- Published
- 2015
- Full Text
- View/download PDF
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