45 results on '"Baluška, František"'
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2. The sensual cell: Feeling and affect in unicellular species
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Reber, Arthur S., Baluška, František, Miller, William B., and Slijepčević, Predrag
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- 2024
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3. Cellular sentience as the primary source of biological order and evolution
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Baluška, František, Reber, Arthur S., and Miller, William B., Jr.
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- 2022
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4. Archaeal Origins of Eukaryotic Cell and Nucleus
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Baluška, František and Lyons, Sherrie
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- 2021
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5. Biology in the 21st century: Natural selection is cognitive selection.
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Miller, William B., Baluška, František, Reber, Arthur S., and Slijepčević, Predrag
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NATURAL selection , *TWENTY-first century , *BIOLOGICAL fitness , *COMPETITION (Biology) , *GENETIC mutation , *ORIGIN of life - Abstract
Natural selection has a formal definition as the natural process that results in the survival and reproductive success of individuals or groups best adjusted to their environment, leading to the perpetuation of those genetic qualities best suited to that organism's environmental niche. Within conventional Neo-Darwinism, the largest source of those variations that can be selected is presumed to be secondary to random genetic mutations. As these arise, natural selection sustains adaptive traits in the context of a 'struggle for existence'. Consequently, in the 20th century, natural selection was generally portrayed as the primary evolutionary driver. The 21st century offers a comprehensive alternative to Neo-Darwinian dogma within Cognition-Based Evolution. The substantial differences between these respective evolutionary frameworks have been most recently articulated in a revision of Crick's Central Dogma, a former centerpiece of Neo-Darwinism. The argument is now advanced that the concept of natural selection should also be comprehensively reappraised. Cognitive selection is presented as a more precise term better suited to 21st century biology. Since cognition began with life's origin, natural selection represents cognitive selection. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Why death and aging ? All memories are imperfect.
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Miller Jr, William B., Baluška, František, Reber, Arthur S., and Slijepčević, Predrag
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MEMORY , *INFORMATION measurement , *COLLECTIVE action , *PROBLEM solving , *INFORMATION resources management , *CELL communication - Abstract
Recent papers have emphasized the primary role of cellular information management in biological and evolutionary development. In this framework, intelligent cells collectively measure environmental cues to improve informational validity to support natural cellular engineering as collaborative decision-making and problem-solving in confrontation with environmental stresses. These collective actions are crucially dependent on cell-based memories as acquired patterns of response to environmental stressors. Notably, in a cellular self-referential framework, all biological information is ambiguous. This conditional requirement imposes a previously unexplored derivative. All cellular memories are imperfect. From this atypical background, a novel theory of aging and death is proposed. Since cellular decision-making is memory-dependent and biology is a continuous natural learning system, the accumulation of previously acquired imperfect memories eventually overwhelms the flexibility cells require to react adroitly to contemporaneous stresses to support continued cellular homeorhetic balance. The result is a gradual breakdown of the critical ability to efficiently measure environmental information and effect cell-cell communication. This age-dependent accretion governs senescence, ultimately ending in death as an organism-wide failure of cellular networking. This approach to aging and death is compatible with all prior theories. Each earlier approach illuminates different pertinent cellular signatures of this ongoing, obliged, living process. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Slime mould: The fundamental mechanisms of biological cognition
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Vallverdú, Jordi, Castro, Oscar, Mayne, Richard, Talanov, Max, Levin, Michael, Baluška, Frantisek, Gunji, Yukio, Dussutour, Audrey, Zenil, Hector, and Adamatzky, Andrew
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- 2018
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8. On plant roots logical gates
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Adamatzky, Andrew, Sirakoulis, Georgios Ch., Martínez, Genaro J., Baluška, Frantisek, and Mancuso, Stefano
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- 2017
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9. A revised central dogma for the 21st century: All biology is cognitive information processing.
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Miller, William B., Baluška, František, and Reber, Arthur S.
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INFORMATION processing , *TWENTY-first century , *BIOLOGICAL systems , *BIOLOGY , *SCIENTIFIC discoveries - Abstract
Crick's Central Dogma has been a foundational aspect of 20th century biology, describing an implicit relationship governing the flow of information in biological systems in biomolecular terms. Accumulating scientific discoveries support the need for a revised Central Dogma to buttress evolutionary biology's still-fledgling migration from a Neodarwinian canon. A reformulated Central Dogma to meet contemporary biology is proposed: all biology is cognitive information processing. Central to this contention is the recognition that life is the self-referential state, instantiated within the cellular form. Self-referential cells act to sustain themselves and to do so, cells must be in consistent harmony with their environment. That consonance is achieved by the continuous assimilation of environmental cues and stresses as information to self-referential observers. All received cellular information must be analyzed to be deployed as cellular problem-solving to maintain homeorhetic equipoise. However, the effective implementation of information is definitively a function of orderly information management. Consequently, effective cellular problem-solving is information processing and management. The epicenter of that cellular information processing is its self-referential internal measurement. All further biological self-organization initiates from this obligate activity. As the internal measurement by cells of information is self-referential by definition, self-reference is biological self-organization, underpinning 21st century Cognition-Based Biology. [ABSTRACT FROM AUTHOR]
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- 2023
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10. Cellular senomic measurements in Cognition-Based Evolution.
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Miller, William B., Baluška, František, and Torday, John S.
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BIOLOGICAL evolution , *INFORMATION measurement , *CONTINUOUS processing , *INFORMATION resources management , *MEASUREMENT - Abstract
All living entities are cognitive and dependent on ambiguous information. Any assessment of that imprecision is necessarily a measuring function. Individual cells measure information to sustain self-referential homeostatic equipoise (self-identity) in juxtaposition to the external environment. The validity of that information is improved by its collective assessment. The reception of cellular information obliges thermodynamic reactions that initiate a self-reinforcing work channel. This expresses as natural cellular engineering and niche constructions which become the complex interrelated tissue ecologies of holobionts. Multicellularity is collaborative cellular information management directed towards the optimization of information quality through its collective measured assessment. Biology and its evolution can now be re-framed as the continuous process of self-referential cellular measurement in the perpetual defense of individual cellular self-identities through the collective form. [ABSTRACT FROM AUTHOR]
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- 2020
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11. Corrigendum to “Slime mould: The fundamental mechanisms of biological cognition” [BioSystems 165 (2018) 57–70]
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Vallverdú, Jordi, Castro, Oscar, Mayne, Richard, Talanov, Max, Levin, Michael, Baluška, Frantisek, Gunji, Yukio, Dussutour, Audrey, Zenil, Hector, and Adamatzky, Andrew
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- 2018
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12. Stress-induced ethanol affects endocytic vesicle recycling and F-actin organisation in arabidopsis root apex cells.
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Kagenishi, Tomoko, Baluška, František, and Yokawa, Ken
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F-actin , *ETHANOL , *HYPOXIA (Water) , *ARABIDOPSIS , *REACTIVE oxygen species , *CYTOSKELETON , *CELLULAR signal transduction - Abstract
Ethanol (EtOH) is a short-chain alcohol that is abundant in nature. EtOH is endogenously produced by plants under hypoxic conditions, and exogenously applied EtOH improves plant stress tolerance at low concentrations (<1%). However, no direct observations have shown how EtOH affects cellular events in plants. In intact Arabidopsis roots, 0.1% EtOH promoted reactive oxygen species production in root apex cells. EtOH also accelerated exocytic vesicle recycling and altered F-actin organisation, both of which are closely related to cell membrane properties. In addition to exogenous EtOH application, hypoxic treatment resulted in EtOH production in roots and degradation of the cross-wall actin cytoskeleton in root epidermal cells. We conclude that hypoxia-induced EtOH production affects endocytic vesicle recycling and associated signalling pathways. • EtOH unbalances endocytic and exocytic vesicle recycling pathways in root apex transition zone cells. • EtOH induces dispersion of F-actin bundles at root apex transition zone cross-walls. • Hypoxia induces endogenous EtOH production and depletion of F-actin in cells of Arabidopsis root apex transition zone. [ABSTRACT FROM AUTHOR]
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- 2023
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13. Defence sugarcane glycoproteins disorganize microtubules and prevent nuclear polarization and germination of Sporisorium scitamineum teliospores.
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Sánchez-Elordi, Elena, Baluška, František, Echevarría, Clara, Vicente, Carlos, and Legaz, M. Estrella
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SUGARCANE , *GLYCOPROTEINS , *POLARIZATION (Nuclear physics) , *GERMINATION , *MICROTUBULES , *TELIOSPORES - Abstract
Microtubules (MTs) are involved in the germination of Sporisorium scitamineum teliospores. Resistant varieties of sugar cane plants produce defence glycoproteins that prevent the infection of the plants by the filamentous fungi Sporisorium scitamineum . Here, we show that a fraction of these glycoproteins prevents the correct arrangement of MTs and causes nuclear fragmentation defects. As a result, nuclei cannot correctly migrate through the growing hyphae, causing germinative failure. Arginase activity contained in defence glycoproteins is already described for preventing fungal germination. Now, its enzymatically active form is presented as a link between the defensive capacity of glycoproteins and the MT disorganization in fungal cells. Active arginase is produced in healthy and resistant plants; conversely, it is not detected in the juice from susceptible varieties, which explains why MT depolarization, nuclear disorganization as well as germination of teliospores are not significantly affected by glycoproteins from non-resistant plants. Our results also suggest that susceptible plants try to increase their levels of arginase after detecting the presence of the pathogen. However, this signal comes “too late” and such defensive mechanism fails. [ABSTRACT FROM AUTHOR]
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- 2016
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14. Cellular and organismal agency – Not based on genes: A comment on Baverstock.
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Baluška, František and Reber, Arthur S.
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GENES - Published
- 2021
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15. Pectins, ROS homeostasis and UV-B responses in plant roots.
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Yokawa, Ken and Baluška, František
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PECTINS , *REACTIVE oxygen species , *EFFECT of ultraviolet radiation on plants , *HOMEOSTASIS , *ENDOCYTOSIS , *TROPISMS - Abstract
Light from the sun contains far-red, visible and ultra violet (UV) wavelength regions. Almost all plant species have been evolved under the light environment. Interestingly, several photoreceptors, expressing both in shoots and roots, process the light information during the plant life cycle. Surprisingly, Arabidopsis root apices express besides the UVR8 UV-B receptor, also root-specific UV-B sensing proteins RUS1 and RUS2 linked to the polar cell–cell transport of auxin. In this mini-review, we focus on reactive oxygen species (ROS) signaling and possible roles of pectins internalized via endocytic vesicle recycling system in the root-specific UV-B perception and ROS homeostasis. [ABSTRACT FROM AUTHOR]
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- 2015
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16. Root apex transition zone: a signalling–response nexus in the root
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Baluška, František, Mancuso, Stefano, Volkmann, Dieter, and Barlow, Peter W.
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PLANT root anatomy , *PLANT cellular signal transduction , *GAP junctions (Cell biology) , *MERISTEMS , *ROOT development , *CELL determination - Abstract
Longitudinal zonation, as well as a simple and regular anatomy, are hallmarks of the root apex. Here we focus on one particular root-apex zone, the transition zone, which is located between the apical meristem and basal elongation region. This zone has a unique role as the determiner of cell fate and root growth; this is accomplished by means of the complex system of a polar auxin transport circuit. The transition zone also integrates diverse inputs from endogenous (hormonal) and exogenous (sensorial) stimuli and translates them into signalling and motoric outputs as adaptive differential growth responses. These underlie the root-apex tropisms and other aspects of adaptive root behaviour. [Copyright &y& Elsevier]
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- 2010
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17. Consciousness Facilitates Plant Behavior.
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Trewavas, Anthony, Baluška, František, Mancuso, Stefano, and Calvo, Paco
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CONSCIOUSNESS , *JASMONATE , *VASCULAR system of plants - Published
- 2020
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18. Endocytosis of Cell Surface Material Mediates Cell Plate Formation during Plant Cytokinesis
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Dhonukshe, Pankaj, Baluška, František, Schlicht, Markus, Hlavacka, Andrej, Šamaj, Jozef, Friml, Jiří, and Gadella, Theodorus W.J.
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PLANT cells & tissues , *CYTOPLASM , *CELLS , *CYTOKINES , *MEMBRANE proteins - Abstract
Summary: Dividing plant cells perform a remarkable task of building a new cell wall within the cytoplasm in a few minutes. A long-standing paradigm claims that this primordial cell wall, known as the cell plate, is generated by delivery of newly synthesized material from Golgi apparatus-originated secretory vesicles. Here, we show that, in diverse plant species, cell surface material, including plasma membrane proteins, cell wall components, and exogenously applied endocytic tracers, is rapidly delivered to the forming cell plate. Importantly, this occurs even when de novo protein synthesis is blocked. In addition, cytokinesis-specific syntaxin KNOLLE as well as plasma membrane (PM) resident proteins localize to endosomes that fuse to initiate the cell plate. The rate of endocytosis is strongly enhanced during cell plate formation, and its genetic or pharmacological inhibition leads to cytokinesis defects. Our results reveal that endocytic delivery of cell surface material significantly contributes to cell plate formation during plant cytokinesis. [Copyright &y& Elsevier]
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- 2006
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19. Plant synapses: actin-based domains for cell-to-cell communication
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Baluška, František, Volkmann, Dieter, and Menzel, Diedrik
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ACTION potentials , *PLANTS , *MOLECULES , *ECOPHYSIOLOGY , *PLANT roots - Abstract
For many years it has been known that plants perform rapid long-distance signalling using classical action potentials that have impacts on diverse processes in plants. Plants also synthesize numerous neuronal molecules and fulfill some criteria for intelligent behaviour. Analysis of recent breakthrough data from ecophysiology studies has revealed that plant roots can discriminate between ‘self’ and ‘non-self’; in animals, this ability to discriminate is dependent on the activities of neuronal synapses. Here, we propose that plant cells establish modes of information exchange between each other that have properties in common with neuronal synapses. Moreover, plants also assemble adhesive contacts that orchestrate cell-to-cell communication between the host cells when challenged with pathogens, parasites and potential symbionts. We propose that these adhesive contacts resemble the immunological synapses found in animals. [Copyright &y& Elsevier]
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- 2005
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20. Getting connected: actin-based cell-to-cell channels in plants and animals
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Baluška, František, Hlavacka, Andrej, Volkmann, Dieter, and Menzel, Diedrik
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PLANT cells & tissues , *CYTOPLASM , *PLASMODESMATA , *CELLS , *ACTIN , *CYTOSKELETON , *MICROTUBULES - Abstract
It has been known for more than one hundred years that plant cells are interconnected by cytoplasmic channels called plasmodesmata. This supracellularity was generally considered to be an exotic feature of walled plants containing immobile cells that are firmly enclosed within robust walls. Unexpectedly, intercellular channels in mobile animal cells have been discovered recently. These are extremely dynamic and sensitive to mechanical stress, which causes their rapid breakage and retraction. Both plasmodesmata and nanotubular cell-to-cell channels are supported by the actin cytoskeleton and exclude microtubules. In this article, we discuss the relevance of cell-to-cell channels not only for intercellular communication but also for the development and morphogenesis of multicellular organisms. We also suggest possible parallels between the cell-to-cell transport of endosomes and intracellular pathogens. [Copyright &y& Elsevier]
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- 2004
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21. New signalling molecules regulating root hair tip growth
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Šamaj, Jozef, Baluška, František, and Menzel, Diedrik
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PLANT enzymes , *ROOT hairs (Botany) , *ROOT growth , *ROOT development , *PLANT roots - Abstract
Root hairs are tip-growing tubes that emerge from trichoblasts (hair-forming epidermal cells) along the length of the root. Signalling events involved in the formation of root hairs are largely unknown. However, two recent studies have revealed that signalling enzymes such as NADPH oxidase and phospholipase D are crucial for root hair growth and development. Reactive oxygen species (ROS) produced by NADPH oxidase activate calcium ion channels in the apical plasma membrane leading to the tip-focused calcium gradient, an inherent feature of growing root hairs. [Copyright &y& Elsevier]
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- 2004
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22. Polar transport of auxin: carrier-mediated flux across the plasma membrane or neurotransmitter-like secretion?
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Baluška*, František, Šamaj, Jozef, and Menzel, Diedrik
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ACETIC acid , *ORGANIC acids , *PLANT growth , *PLANT hormones , *BIOLOGICAL membranes - Abstract
Auxin (indole-3-acetic acid) has its name derived from the Greek word auxein, meaning ‘to increase’, and it drives plant growth and development. Auxin is a small molecule derived from the amino acid tryptophan and has both hormone- and morphogen-like properties. Although there is much still to be learned, recent progress has started to unveil how auxin is transported from cell-to-cell in a polar manner. Two recent breakthrough papers from Gerd Ju¨rgens’ group indicate that auxin transport is mediated by regulated vesicle trafficking, thus encompassing neurotransmitter-like features. [Copyright &y& Elsevier]
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- 2003
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23. What is apical and what is basal in plant root development?
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Baluška, František, Barlow, Peter W., Baskin, Tobias I., Chen, Rujin, Feldman, Lewis, Forde, Brian G., Geisler, Markus, Jernstedt, Judy, Menzel, Diedrik, Muday, Gloria K., Murphy, Angus, Šamaj, Jozef, and Volkmann, Dieter
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- 2005
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24. Root-Apex Proton Fluxes at the Centre of Soil-Stress Acclimation.
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Siao, Wei, Coskun, Devrim, Baluška, František, Kronzucker, Herbert J., and Xu, Weifeng
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ACCLIMATIZATION , *PROTONS , *ROOT development , *ROOT formation , *ROOT growth , *FLUX (Energy) - Abstract
Proton (H+) fluxes in plant roots play critical roles in maintaining root growth and facilitating plant responses to multiple soil stresses, including fluctuations in nutrient supply, salt infiltration, and water stress. Soil mining for nutrients and water, rates of nutrient uptake, and the modulation of cell expansion all depend on the regulation of root H+ fluxes, particularly at the root apex, mediated primarily by the activity of plasma membrane (PM) H+-ATPases. Here, we summarize recent findings on the regulatory mechanisms of H+ fluxes at the root apex under three abiotic stress conditions – phosphate deficiency, salinity stress, and water deficiency – and present an integrated physiomolecular view of the functions of H+ fluxes in maintaining root growth in the acclimation to soil stress. Modulation of proton fluxes at the root apex plays roles in nutrient and water acquisition to overcome several types of abiotic stress conditions. Enhanced plasma membrane (PM) H+-ATPase activity in different root apex zones helps to maintain cell elongation, root hair formation, lateral root development, and the secretion of organic acids under phosphate-deficient conditions. Auxin and blue-light signaling pathways are involved in the low-phosphate responses in roots that are tightly linked with regulation of the proton fluxes at the root apex. PKS5- and PIN2-regulated PM H+-ATPase activity at the root apex is essential for salt tolerance and the salt avoidance response. Several signaling components that attribute to drought resistance and hydrotropic response control the proton fluxes at the root apex via ABA- and brassinosteroid-mediated pathways. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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25. The N-space Episenome unifies cellular information space-time within cognition-based evolution.
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Miller, William B., Torday, John S., and Baluška, František
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BIOLOGICAL evolution , *INFORMATION resources management , *MULTICELLULAR organisms , *MORPHOGENESIS , *CELL division - Abstract
Self-referential cellular homeostasis is maintained by the measured assessment of both internal status and external conditions based within an integrated cellular information field. This cellular field attachment to biologic information space-time coordinates environmental inputs by connecting the cellular senome, as the sum of the sensory experiences of the cell, with its genome and epigenome. In multicellular organisms, individual cellular information fields aggregate into a collective information architectural matrix, termed a N -space Episenome, that enables mutualized organism-wide information management. It is hypothesized that biological organization represents a dual heritable system constituted by both its biological materiality and a conjoining N -space Episenome. It is further proposed that morphogenesis derives from reciprocations between these inter-related facets to yield coordinated multicellular growth and development. The N -space Episenome is conceived as a whole cell informational projection that is heritable, transferable via cell division and essential for the synchronous integration of the diverse self-referential cells that constitute holobionts. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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26. Biological evolution as defense of 'self'.
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Miller, William B., Torday, John S., and Baluška, František
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BIOLOGICAL evolution , *MILITARY readiness , *SELF , *ENERGY consumption , *INFORMATION measurement - Abstract
Abstract Although the origin of self-referential consciousness is unknown, it can be argued that the instantiation of self-reference was the commencement of the living state as phenomenal experientiality. As self-referential cognition is demonstrated by all living organisms, life can be equated with the sustenance of cellular homeostasis in the continuous defense of 'self'. It is proposed that the epicenter of 'self' is perpetually embodied within the basic cellular form in which it was instantiated. Cognition-Based Evolution argues that all of biological and evolutionary development represents the perpetual autopoietic defense of self-referential basal cellular states of homeostatic preference. The means by which these states are attained and maintained is through self-referential measurement of information and its communication. The multicellular forms, either as biofilms or holobionts, represent the cellular attempt to achieve maximum states of informational distinction and energy efficiency through individual and collective means. In this frame, consciousness, self-consciousness and intelligence can be identified as forms of collective cellular phenotype directed towards the defense of fundamental cellular self-reference. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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27. Swarm intelligence in plant roots
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Baluška, František, Lev-Yadun, Simcha, and Mancuso, Stefano
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- 2010
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28. Plant Cytokinesis: Terminology for Structures and Processes.
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Smertenko, Andrei, Assaad, Farhah, Baluška, František, Bezanilla, Magdalena, Buschmann, Henrik, Drakakaki, Georgia, Hauser, Marie-Theres, Janson, Marcel, Mineyuki, Yoshinobu, Moore, Ian, Müller, Sabine, Murata, Takashi, Otegui, Marisa S., Panteris, Emmanuel, Rasmussen, Carolyn, Schmit, Anne-Catherine, Šamaj, Jozef, Samuels, Lacey, Staehelin, L. Andrew, and Van Damme, Daniel
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CYTOKINESIS , *CELL division , *VESICLES (Cytology) , *BIOSYNTHESIS , *PLANT conservation , *PLANT evolution , *PLANTS - Abstract
Plant cytokinesis is orchestrated by a specialized structure, the phragmoplast. The phragmoplast first occurred in representatives of Charophyte algae and then became the main division apparatus in land plants. Major cellular activities, including cytoskeletal dynamics, vesicle trafficking, membrane assembly, and cell wall biosynthesis, cooperate in the phragmoplast under the guidance of a complex signaling network. Furthermore, the phragmoplast combines plant-specific features with the conserved cytokinetic processes of animals, fungi, and protists. As such, the phragmoplast represents a useful system for understanding both plant cell dynamics and the evolution of cytokinesis. We recognize that future research and knowledge transfer into other fields would benefit from standardized terminology. Here, we propose such a lexicon of terminology for specific structures and processes associated with plant cytokinesis. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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29. Anesthetics, Anesthesia, and Plants.
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Yokawa, Ken, Kagenishi, Tomoko, and Baluška, František
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GENERAL anesthesia , *PLANT physiology , *ANESTHETICS , *STIMULUS & response (Biology) , *MOLECULAR biology - Abstract
General anesthesia, its nature, and how exactly it works are still poorly understood. Plants can also be anesthetized and lose their responses to external stimuli. Interestingly, plants are known to produce endogenous anesthetic compounds to deal with stress. Plants offer an excellent model object for studies on anesthetics and anesthesia. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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30. <atl>Actin-driven polar growth of plant cells
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Baluška, František and Volkmann, Dieter
- Published
- 2002
31. Auxin-mediated molecular mechanisms of heavy metal and metalloid stress regulation in plants.
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Mathur, Piyush, Tripathi, Durgesh Kumar, Baluška, František, and Mukherjee, Soumya
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PLANT hormones , *SEMIMETALS , *HEAVY metals , *ABSCISIC acid , *STRIGOLACTONES , *SALICYLIC acid - Abstract
Expeditious industrial development has prompted the upraised production and release of colossal amounts of various heavy metals (HMs) and metalloids in the environment. Heavy metal stress (HMS) intimidates crop production and threatens global food security. After their uptake in plants, various plant responses are stimulated to deal with heavy metal or metalloid stress including the elevated synthesis of auxin plant hormone. Latest researches have marked the potential of auxin in imparting resilience to these stresses in plants mostly via reducing their uptake, promoting their chelation and vacuolar sequestration in plant tissues and alleviating the stress-induced oxidative damage. Furthermore, auxin exhibits crosstalk with various other biomolecules like nitric oxide (NO), carbon monoxide (CO), ethylene (Et), salicylic acid (SA) and abscisic acid (ABA) which in turn protect the plants from oxidative stress generated from different stressful conditions. Regulation of the genes and transcription factors associated with auxin signaling provides a clue to the molecular signaling responses associated with heavy metal and metalloid stress. Although various investigations report the role of hydrogen sulfide (H 2 S) in mitigation of various abiotic stresses, no substantial evidence deciphers the possible role of auxin-H 2 S crosstalk during HMs and metalloid stress in plants. In this context, it is important to extend our understanding on the integrative role of auxin, carbon monoxide (CO) and hydrogen sulfide (H 2 S) during HM and metalloid stress in plants. Various other biomolecules like strigolactones (SLs), melatonin and polyamines are expected to be associated with auxin-mediated signaling during HM and metalloid stress. Although persuasive at present, future investigations are necessary to bring about a comprehensive understanding of auxin stimulated biological responses at physiological and molecular levels. • Auxin plays a key role during HM and metalloid stress in plants. • Auxin protects the plant from oxidative stress and increase the production of antioxidative enzymes. • Auxin concentrations in roots are increased by various rhizospheric microorganisms and mitigate plants from HMS. • A crosstalk exists between various other phytohormones such as ABA, Et, SA, BRs, etc. and auxins during HMS. • Auxin also interacts with other signalling molecules like NO, melatonin, CO and H 2 S during stress conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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32. Nanosheets for Delivery of Biomolecules into Plant Cells.
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Bao, Wenlong, Wan, Yinglang, and Baluška, František
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PLANT cells & tissues , *LAYERED double hydroxides , *BIOMOLECULES , *NANOPARTICLES , *BOTANY - Abstract
Layered double hydroxides (LDHs) are sheet-formed nanoparticles (NPs) of adjustable size. It has recently been reported that LDHs have the ability to deliver biomolecules into intact plant cells. LDHs show promise as a novel and powerful tool for plant cell studies and similar applications. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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33. Root photomorphogenesis in laboratory-maintained Arabidopsis seedlings
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Yokawa, Ken, Kagenishi, Tomoko, and Baluška, František
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PLANT photomorphogenesis , *ARABIDOPSIS , *SEEDLINGS , *PLANT photoreceptors , *PLANT root morphology , *EFFECT of light on plants - Abstract
In nature, root systems of most terrestrial plants are underground in darkness. Nevertheless, several photoreceptors have been found in roots and light-responsive mechanisms allowing roots to escape from strong light conditions have been discovered. In transparent Petri dishes, regular light exposure affects root morphology and behavior. We advocate the use of darkened Petri dishes to allow roots to be kept in darkness, thus mimicking more closely the conditions in nature. [Copyright &y& Elsevier]
- Published
- 2013
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34. The wall-associated kinase gene family in pea (Pisum sativum) and its function in response to B deficiency and Al toxicity.
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Li, Xuewen, Ou, Meiyin, Li, Li, Li, Yalin, Feng, Yingming, Huang, Xin, Baluška, František, Shabala, Sergey, Yu, Min, Shi, Weiming, and Wu, Feihua
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GENE families , *PEAS , *RECEPTOR-like kinases , *PLANT cell walls , *SOYBEAN , *PROTEIN domains - Abstract
Plant cell walls are embedded in a pectin matrix which is physically linked with the wall-associated kinases (WAKs), a subfamily of receptor-like kinases that participate in the cell wall integrity (CWI) sensing. Since cell walls are also the main binding sites for boron (B) and aluminum (Al), WAK may be potentially associated with the regulation of plant responses to Al toxicity and B deficiency. Using pea as a model species, we have identified a total of 28 WAK genes in the genome and named them according to its chromosomal location. All the PsWAKs were phylogenetically grouped into three clades. Phylogenetic relationship and synteny analysis showed that the PsWAKs in pea and Glycine max or Medicago truncatula shared a relatively conserved evolutionary history. Protein domain, motif, and transmembrane analysis indicated that all PsWAK proteins were predicted to be localized to the plasma membrane, and most PsWAKs shared a similar structure to their homologs. The RNA-seq data showed that the expression pattern of WAK genes in response to B deficiency was similar to that of Al toxicity, with most of PsWAKs being up-regulated. The qRT-PCR results further confirmed that PsWAK5, PsWAK9 and PsWAK14 were more specific for both B-deficiency and Al toxicity, and the expression levels of PsWAK5, PsWAK9 and PsWAK14 were significantly higher in the Al-sensitive cultivar Hyogo than in the Al-resistant cultivar Alaska under Al toxicity. This study provided an important basis for the functional and evolutionary analysis of PsWAKs and linked them to responses to cell wall damage induced by B-deficiency and Al toxicity, suggesting that PsWAKs may play a key role in the perception of cell wall integrity under Al toxicity or B-deficiency, as well as in the regulation of Al tolerance in pea. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
35. Neurotransmitters in Plant Life: V.V. Roshchina; Science Publishers, Enfield, New Hampshire, 2000, 283 pp., ISBN 1-57808-142-4 $87.50
- Author
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Baluška, František
- Published
- 2003
- Full Text
- View/download PDF
36. Subcellular localizations of Arabidopsis myotubularins MTM1 and MTM2 suggest possible functions in vesicular trafficking between ER and cis-Golgi.
- Author
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Nagpal, Akanksha, Ndamukong, Ivan, Hassan, Ammar, Avramova, Zoya, and Baluška, František
- Subjects
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ARABIDOPSIS , *PHOSPHATASES , *MYOTUBULARIN , *NICOTIANA benthamiana , *AUTOPHAGY , *ENDOSOMES - Abstract
The two Arabidopsis genes AtMTM1 and AtMTM2 encode highly similar phosphoinositide 3-phosphatases from the myotubularin family. Despite the high-level conservation of structure and biochemical activities, their physiological roles have significantly diverged. The nature of a membrane and the concentrations of their membrane-anchored substrates (PtdIns3 P or PtdIns3,5 P 2 ) and/or products (PtdIns5 P and PtdIns) are considered critical for determining the functional specificity of myotubularins. We have performed comprehensive analyses of the subcellular localization of AtMTM1 and AtMTM2 using a variety of specific constructs transiently expressed in Nicotiana benthamiana leaf epidermal cells under the control of 35 S promoter. AtMTM1 co-localized preferentially with cis -Golgi membranes, while AtMTM2 associated predominantly with ER membranes. In a stark contrast with animal/human MTMs, neither AtMTM1 nor AtMTM2 co-localizes with early or late endosomes or with TGN/EE compartments, making them unlikely participants in the endosomal trafficking system. Localization of the AtMTM2 is sensitive to cold and osmotic stress challenges. In contrast to animal myotubularins, Arabidopsis myotubularins do not associate with endosomes. Our results suggest that Arabidopsis myotubularins play a role in the vesicular trafficking between ER exit sites and cis -Golgi elements. The significance of these results is discussed also in the context of stress biology and plant autophagy. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
37. Low-amplitude, high-frequency electromagnetic field exposure causes delayed and reduced growth in Rosa hybrida.
- Author
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Grémiaux, Alexandre, Girard, Sébastien, Guérin, Vincent, Lothier, Jérémy, Baluška, František, Davies, Eric, Bonnet, Pierre, and Vian, Alain
- Subjects
- *
ROSES , *PLANT growth , *PLANT growing media , *PLANT roots , *BUDS - Abstract
It is now accepted that plants perceive high-frequency electromagnetic field (HF-EMF). We wondered if the HF-EMF signal is integrated further in planta as a chain of reactions leading to a modification of plant growth. We exposed whole small ligneous plants (rose bush) whose growth could be studied for several weeks. We performed exposures at two different development stages (rooted cuttings bearing an axillary bud and 5-leaf stage plants), using two high frequency (900 MHz) field amplitudes (5 and 200 V m-1). We achieved a tight control on the experimental conditions using a state-of-the-art stimulation device (Mode Stirred Reverberation Chamber) and specialized culture-chambers. After the exposure, we followed the shoot growth for over a one-month period. We observed no growth modification whatsoever exposure was performed on the 5-leaf stage plants. When the exposure was performed on the rooted cuttings, no growth modification was observed on Axis I (produced from the elongation of the axillary bud). Likewise, no significant modification was noted on Axis II produced at the base of Axis I, that came from pre-formed secondary axillary buds. In contrast, Axis II produced at the top of Axis I, that came from post-formed secondary buds consistently displayed a delayed and significant reduced growth (45%). The measurements of plant energy uptake from HF-EMF in this exposure condition (SAR of 7.2 10-4W kg-1) indicated that this biological response is likely not due to thermal effect. These results suggest that exposure to electromagnetic field only affected development of post-formed organs. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
38. Di-4-ANEPPDHQ, a fluorescent probe for the visualisation of membrane microdomains in living Arabidopsis thaliana cells.
- Author
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Zhao, Xiaoyu, Li, Ruili, Lu, Cunfu, Baluška, František, and Wan, Yinglang
- Subjects
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ARABIDOPSIS thaliana , *FLUORESCENT probes , *CYTOLOGY , *PROPIDIUM iodide , *PLANT cells & tissues - Abstract
Cholesterol-enriched microdomains, also called lipid rafts, are nanoscale membrane structures with a high degree of structural order. Since these microdomains play important roles in dynamic cytological events, such as cell signalling and membrane trafficking, the detection and tracking of microdomain behaviours are crucial to studies on modern membrane physiology. Currently, observation of microdomains is mostly based on the detection of specific raft-resident constituents using artificial cross-link fluorescent probes. However, only a few microdomain-specific fluorescent dyes are available for plant cell biology studies. In this study, the photophysical properties of di-4-ANEPPDHQ were analysed. The use of confocal laser scanning microscope (CLSM)-based methods in the visualisation of microdomains in living cells of Arabidopsis thaliana was assessed. The results confirmed that the generalised polarisation (GP) method can be used to quantitatively visualise the membrane orders in live plant cells. This dye was found to have low cytotoxicity in plant root epidermal cells and root hairs. These findings suggest that di-4-ANEPPDHQ is an appropriate tool for the visualisation of microdomains in living plant cells. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
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39. Ammonium stress in Arabidopsis: signaling, genetic loci, and physiological targets.
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Li, Baohai, Li, Guangjie, Kronzucker, Herbert J., Baluška, František, and Shi, Weiming
- Subjects
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ARABIDOPSIS thaliana , *EFFECT of ammonium on plants , *EFFECT of stress on plants , *PLANT cellular signal transduction , *LOCUS in plant genetics , *PLANT phylogeny - Abstract
Highlights: [•] We review genetic loci, signaling pathways, and physiological targets of NH4 + stress in the model system Arabidopsis thaliana. [•] Differing NH4 + stress responses between belowground and aboveground sources are dissected. [•] New experimental approaches to the study of NH4 + toxicity are outlined. [•] An integrated view of behavior and signaling in response to NH4 + stress is proposed. [Copyright &y& Elsevier]
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- 2014
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40. Isolation of de-exined pollen and cytological studies of the pollen intines of Pinus bungeana Zucc. Ex Endl. and Picea wilsonii Mast
- Author
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Fang, Kefeng, Wang, Younian, Yu, Tongquan, Zhang, Lingyun, Baluška, František, Šamaj, Jozef, and Lin, Jinxing
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POLLINATION , *PALYNOLOGY , *IMMUNOGLOBULINS , *MOLECULAR cloning - Abstract
Abstract: To study the cytological and biochemical characteristics of intine, pollen deprived of exine, or de-exined pollen, was isolated from the gymnosperms Pinus bungeana and Picea wilsonii. The factors influencing the isolation rate were examined. Cellulose, callose, pectin, and arabinogalactan proteins (AGPs) were localized in this material using fluorescent probes, and components of the isolated intine were further analyzed by Fourier transform infrared (FTIR) microspectroscopy. The isolation protocol was repeatable and reliable. Cellulose was found to be evenly distributed on the surface of the intine, as indicated by strong calcofluor White ST (CW) fluorescence, and aniline blue staining revealed that callose was present on the intine of P. bungeana but not on that of P. wilsonii. Immunolabeling revealed that acidic pectin epitopes recognized by the monoclonal antibody JIM5 were present on the pollen intine, as well as esterified pectin recognized by the monoclonal antibody JIM7, and AGPs recognized by the LM2 antibody. Two lectin binding sites, the concanavalin agglutinin (Con A) and soybean agglutinin (SBA) binding sites, were present on the intine surface, but no wheat germ agglutinin (WGA) binding sites were detectable. These results were confirmed by FTIR analysis. [Copyright &y& Elsevier]
- Published
- 2008
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41. Plant neurobiology: an integrated view of plant signaling
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Brenner, Eric D., Stahlberg, Rainer, Mancuso, Stefano, Vivanco, Jorge, Baluška, František, and Van Volkenburgh, Elizabeth
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PLANT physiology , *PLANTS , *AUXIN , *NEUROBIOLOGY , *PLANT hormones - Abstract
Plant neurobiology is a newly focused field of plant biology research that aims to understand how plants process the information they obtain from their environment to develop, prosper and reproduce optimally. The behavior plants exhibit is coordinated across the whole organism by some form of integrated signaling, communication and response system. This system includes long-distance electrical signals, vesicle-mediated transport of auxin in specialized vascular tissues, and production of chemicals known to be neuronal in animals. Here we review how plant neurobiology is being directed toward discovering the mechanisms of signaling in whole plants, as well as among plants and their neighbors. [Copyright &y& Elsevier]
- Published
- 2006
- Full Text
- View/download PDF
42. The endocytic network in plants
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Šamaj, Jozef, Read, Nick D., Volkmann, Dieter, Menzel, Diedrik, and Baluška, František
- Subjects
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ENDOCYTOSIS , *CELL communication , *CYTOKINESIS , *PLANT cell walls , *MORPHOGENESIS - Abstract
Endocytosis and vesicle recycling via secretory endosomes are essential for many processes in multicellular organisms. Recently, higher plants have provided useful experimental model systems to study these processes. Endocytosis and secretory endosomes in plants play crucial roles in polar tip growth, a process in which secretory and endocytic pathways are integrated closely. Plant endocytosis and endosomes are important for auxin-mediated cell–cell communication, gravitropic responses, stomatal movements, cytokinesis and cell wall morphogenesis. There is also evidence that F-actin is essential for endocytosis and that plant-specific myosin VIII is an endocytic motor in plants. Last, recent results indicate that the trans Golgi network in plants should be considered an integral part of the endocytic network. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
43. Actin-based motility of endosomes is linked to the polar tip growth of root hairs
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Voigt, Boris, Timmers, Antonius C.J., Šamaj, Jozef, Hlavacka, Andrej, Ueda, Takashi, Preuss, Mary, Nielsen, Erik, Mathur, Jaideep, Emans, Neil, Stenmark, Harald, Nakano, Akihiko, Baluška, František, and Menzel, Diedrik
- Subjects
- *
ROOT hairs (Botany) , *ARABIDOPSIS thaliana , *ACTIN , *HAIR cells - Abstract
Abstract: Plant tip growth has been recognized as an actin-based cellular process requiring targeted exocytosis and compensatory endocytosis to occur at the growth cone. However, the identity of subcellular compartments involved in polarized membrane trafficking pathways remains enigmatic in plants. Here we characterize endosomal compartments in tip-growing root hair cells. We demonstrate their presence at the growing tip and differential distribution upon cessation of tip growth. We also show that both the presence of endosomes as well as their rapid movements within the tip region depends on an intact actin cytoskeleton and involves actin polymerization. In conclusion, actin-propelled endosomal motility is tightly linked to the polar tip growth of root hairs. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
44. GFP-FABD2 fusion construct allows in vivo visualization of the dynamic actin cytoskeleton in all cells of Arabidopsis seedlings
- Author
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Voigt, Boris, Timmers, Antonius C.J., Šamaj, Jozef, Müller, Jens, Baluška, František, and Menzel, Diedrik
- Subjects
- *
ARABIDOPSIS , *ACTIN , *ARABIDOPSIS thaliana , *SEEDLINGS - Abstract
Abstract: In vivo visualization of filamentous actin in all cells of Arabidopsis thaliana seedlings is essential for understanding the numerous roles of the actin cytoskeleton in diverse processes of cell differentiation. A previously introduced reporter construct based on the actin-binding domain of mouse talin proved to be useful for unravelling some of these aspects in cell layers close to the organ surface. However, cells more deeply embedded, especially stelar cells active in polar transport of auxin, show either diffuse or no fluorescence at all due to the lack of expression of the fusion protein. The same problem is encountered in the root meristem. Recently introduced actin reporters based on fusions between A. thaliana fimbrin 1 and GFP gave brilliant results in organs from the root differentiation zone upwards to the leaves, however failed to depict the filamentous actin cytoskeleton in the transition zone of the root, in the apical meristem and the root cap. To overcome these problems, we have prepared new transgenic lines for the visualization of F-actin in vivo. We report here that a construct consisting of GFP fused to the C-terminal half of A. thaliana fimbrin 1 reveals dynamic arrays of F-actin in all cells of stably transformed A. thaliana seedlings. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
45. Response to Alpi et al.: Plant neurobiology: the gain is more than the name
- Author
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Brenner, Eric D., Stahlberg, Rainer, Mancuso, Stefano, Baluška, František, and Van Volkenburgh, Elizabeth
- Published
- 2007
- Full Text
- View/download PDF
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