1. A functionally-distinct carboxylic acid reductase PcCAR4 unearthed from a repertoire of type IV CARs in the white-rot fungus Pycnoporus cinnabarinus
- Author
-
Muhamad Hawari Mansor, Jonathan Guyang Ling, Rozida Mohd. Khalid, Margit Winkler, Abdul Munir Abdul Murad, Farah Diba Abu Bakar, and Doris Huai Xia Quay
- Subjects
0106 biological sciences ,0301 basic medicine ,Carboxylic acid ,Carboxylic Acids ,Bioengineering ,medicine.disease_cause ,01 natural sciences ,Applied Microbiology and Biotechnology ,Substrate Specificity ,Fungal Proteins ,03 medical and health sciences ,chemistry.chemical_compound ,010608 biotechnology ,Complementary DNA ,Escherichia coli ,medicine ,Peptide sequence ,Gene ,Phylogeny ,Benzoic acid ,Trametes ,chemistry.chemical_classification ,Aldehydes ,biology ,General Medicine ,Pycnoporus cinnabarinus ,biology.organism_classification ,Pycnoporus ,030104 developmental biology ,Enzyme ,chemistry ,Biochemistry ,Oxidoreductases ,human activities ,Biotechnology - Abstract
Carboxylic acid reductases (CARs) are attracting burgeoning attention as biocatalysts for organic synthesis of aldehydes and their follow-up products from economic carboxylic acid precursors. The CAR enzyme class as a whole, however, is still poorly understood. To date, relatively few CAR sequences have been reported, especially from fungal sources. Here, we sought to increase the diversity of the CAR enzyme class. Six new CAR sequences from the white-rot fungus Pycnoporus cinnabarinus were identified from genome-wide mining. Genome and gene clustering analysis suggests that these PcCAR enzymes play different natural roles in Basidiomycete systems, compared to their type II Ascomycete counterparts. The cDNA sequences of all six Pccar genes were deduced and analysis of their corresponding amino acid sequence showed that they encode for proteins of similar properties that possess a conserved modular functional tri-domain arrangement. Phylogenetic analyses showed that all PcCAR enzymes cluster together with the other type IV CARs. One candidate, PcCAR4, was cloned and over-expressed recombinantly in Escherichia coli. Subsequent biotransformation-based screening with a panel of structurally-diverse carboxylic acid substrates suggest that PcCAR4 possessed a more pronounced substrate specificity compared to previously reported CARs, preferring to reduce sterically-rigid carboxylic acids such as benzoic acid. These findings thus present a new functionally-distinct member of the CAR enzyme class.
- Published
- 2020
- Full Text
- View/download PDF