1. HiTC: exploration of high-throughput ‘C’ experiments.
- Author
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Servant, Nicolas, Lajoie, Bryan R., Nora, Elphège P., Giorgetti, Luca, Chen, Chong-Jian, Heard, Edith, Dekker, Job, and Barillot, Emmanuel
- Subjects
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BIOINFORMATICS , *INFORMATION resources , *NUCLEOTIDE sequence , *SEQUENCE analysis , *COMPUTER software , *DATA transformations (Statistics) , *WEBSITES - Abstract
Summary: The R/Bioconductor package HiTC facilitates the exploration of high-throughput 3C-based data. It allows users to import and export ‘C’ data, to transform, normalize, annotate and visualize interaction maps. The package operates within the Bioconductor framework and thus offers new opportunities for future development in this field.Availability and implementation: The R package HiTC is available from the Bioconductor website. A detailed vignette provides additional documentation and help for using the package.Contact: nicolas.servant@curie.frSupplementary information: Supplementary data are available at Bioinformatics online. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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