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The CRISPR/Cas9 genome editing system has been in the spotlight compared to programmable nucleases such as ZFNs and TALENs due to its simplicity, versatility, and high efficiency. CRISPR/Cas9 has revolutionized plant genetic engineering and is broadly used to edit various plants' genomes, including those transformation-recalcitrant species such as oil palm. This review will comprehensively present the CRISPR-Cas9 system's brief history and underlying mechanisms. We then highlighted the establishment of the CRISPR/Cas9 system in plants with an emphasis on the strategies of highly efficient guide RNA design, the establishment of various CRISPR/Cas9 vector systems, approaches of multiplex editing, methods of transformation for stable and transient techniques, available methods for detecting and analyzing mutations, which have been applied and could be adopted for CRISPR/Cas9 genome editing in oil palm. In addition, we also provide insight into the strategy of DNA-free genome editing and its potential application in oil palm. [ABSTRACT FROM AUTHOR]

Simple Summary: Phytoremediation is a plant-based approach to extract, stabilise, eliminate, or render pollutants into less harmful form. The study highlights the use of a native polar microalga as a means of phytoremediation in Antarctica where imported microbes are prohibited. Since 1959, Antarctica has been a protected region to preserve its dynamic ecosystems, but it is increasingly vulnerable to climate change and pollution. One of the anthropogenic disturbances in the continent is diesel spillage. Due to the extreme polar environment, natural attenuation of spilled diesel is severely hindered; hence, the problem calls for an effective and sustainable solution. This laboratory study proved that Antarctic microalga was capable of removing diesel (57.6%) through biodegradation and biosorption in the span of nine days. Meanwhile, mixotrophic cultivation triggered the vacuolar activities and potentially stimulated lipid assimilation in the cells. The microalgal-based process offers a cheap alternative in water decontamination while bearing the economic potential through the secretion of valuable products, such as biolipids. Microalgae are well known for their metal sorption capacities, but their potential in the remediation of hydrophobic organic compounds has received little attention in polar regions. We evaluated in the laboratory the ability of an Antarctic microalga to remediate diesel hydrocarbons and also investigated physiological changes consequent upon diesel exposure. Using a polyphasic taxonomic approach, the microalgal isolate, WCY_AQ5_1, originally sampled from Greenwich Island (South Shetland Islands, maritime Antarctica) was identified as Tritostichococcus sp. (OQ225631), a recently erected lineage within the redefined Stichococcus clade. Over a nine-day experimental incubation, 57.6% of diesel (~3.47 g/L) was removed via biosorption and biodegradation, demonstrating the strain's potential for phytoremediation. Fourier transform infrared spectroscopy confirmed the adsorption of oil in accordance with its hydrophobic characteristics. Overall, degradation predominated over sorption of diesel. Chromatographic analysis confirmed that the strain efficiently metabolised medium-chain length n-alkanes (C-7 to C-21), particularly n-heneicosane. Mixotrophic cultivation using diesel as the organic carbon source under a constant light regime altered the car/chl-a ratio and triggered vacuolar activities. A small number of intracellular lipid droplets were observed on the seventh day of cultivation in transmission electron microscopic imaging. This is the first confirmation of diesel remediation ability in an Antarctic green microalga. [ABSTRACT FROM AUTHOR]

Research has confirmed that the utilisation of Antarctic microorganisms, such as bacteria, yeasts and fungi, in the bioremediation of diesel may provide practical alternative approaches. However, to date there has been very little attention towards Antarctic microalgae as potential hydrocarbon degraders. Therefore, this study focused on the utilisation of an Antarctic microalga in the bioremediation of diesel. The studied microalgal strain was originally obtained from a freshwater ecosystem in Paradise Bay, western Antarctic Peninsula. When analysed in systems with and without aeration, this microalgal strain achieved a higher growth rate under aeration. To maintain the growth of this microalga optimally, a conventional one-factor-at a-time (OFAT) analysis was also conducted. Based on the optimized parameters, algal growth and diesel degradation performance was highest at pH 7.5 with 0.5 mg/L NaCl concentration and 0.5 g/L of NaNO3 as a nitrogen source. This currently unidentified microalga flourished in the presence of diesel, with maximum algal cell numbers on day 7 of incubation in the presence of 1% v/v diesel. Chlorophyll a, b and carotenoid contents of the culture were greatest on day 9 of incubation. The diesel degradation achieved was 64.5% of the original concentration after 9 days. Gas chromatography analysis showed the complete mineralisation of C7–C13 hydrocarbon chains. Fourier transform infrared spectroscopy analysis confirmed that strain WCY_AQ5_3 fully degraded the hydrocarbon with bioabsorption of the products. Morphological and molecular analyses suggested that this spherical, single-celled green microalga was a member of the genus Micractinium. The data obtained confirm that this microalga is a suitable candidate for further research into the degradation of diesel in Antarctica. [ABSTRACT FROM AUTHOR]

In this study, the ability of a natural grass named Megathyrsus maximus (Guinea grass) as a sorbent for cleaning up diesel spills in water was investigated. Fourier transform infrared (FTIR) spectroscopy was used to identify the physicochemical properties of untreated and treated GG. Several parameters influencing the efficiency of oil absorbed by guinea grass were optimised using established One Factor at a Time (OFAT) and followed by Response Surface Methodology (RSM) approaches. The optimised parameters include heat treatment, time of heating, packing density, and diesel concentration, with only the significant factors proceeded to statistical optimisation through RSM. As a result of OFAT analysis, 18.83 mL of oil was absorbed at 110 °C for 15 min time of heating, with packing density of 14 g/cm3 and oil concentration of 10% (v/v). Through RSM, the predicted model was significant, confirming that packing density and oil concentration significantly influenced the efficiency of oil absorption by GG. The software predicted an oil absorption efficiency of 16.64 mL, whereas the experimental model validated the design with 22.33 mL of oil absorbed at a constant temperature and time, respectively. The RSM technique has proven better efficiency and effectiveness in absorbing oil compared to OFAT. This research advances our understanding of the utilisation of natural sorbents as a diesel pollution remediation strategy. [ABSTRACT FROM AUTHOR]

Phycoerythrin (PE) is a pink/red-colored pigment found in rhodophytes, cryptophytes, and blue-green algae (cyanobacteria). The interest in PE is emerging from its role in delivering health benefits. Unfortunately, the current cyanobacterial-PE (C-PE) knowledge is still in the infant stage. It is essential to acquire a more comprehensive understanding of C-PE. This study aimed to review the C-PE structure, up and downstream processes of C-PE, application of C-PE, and strategies to enhance its stability and market value. In addition, this study also presented a strengths, weaknesses, opportunities, and threats (SWOT) analysis on C-PE. Cyanobacteria appeared to be the more promising PE producers compared to rhodophytes, cryptophytes, and macroalgae. Green/blue light is preferred to accumulate higher PE content in cyanobacteria. Currently, the prominent C-PE extraction method is repeated freezing–thawing. A combination of precipitation and chromatography approaches is proposed to obtain greater purity of C-PE. C-PE has been widely exploited in various fields, such as nutraceuticals, pharmaceuticals, therapeutics, cosmetics, biotechnology, food, and feed, owing to its bioactivities and fluorescent properties. This review provides insight into the state-of-art nature of C-PE and advances a step further in commercializing this prospective pigment. [ABSTRACT FROM AUTHOR]

Fucoxanthin is one of the light-harvesting pigments in brown microalgae, which is increasingly gaining attention due to its numerous health-promoting properties. Currently, the production of microalgal fucoxanthin is not yet feasible from an economic perspective. However, the cultivation of microalgae at favourable conditions holds great potential to increase the viability of this fucoxanthin source. Hence, this study aimed to review the fucoxanthin production of microalgae under different conditions systematically. A literature search was performed using the Web of Science, Scopus and PubMed databases. A total of 188 articles were downloaded and 28 articles were selected for the current review by two independent authors. Microalgae appeared to be a more reliable fucoxanthin source compared to macroalgae. Overall, a consensus fucoxanthin production condition was obtained and proposed: light intensity ranging from 10 to 100 µmol/m2/s could achieve a higher fucoxanthin content. However, the optimal light condition in producing fucoxanthin is species-specific. The current review serves as an antecedent by offering insights into the fucoxanthin-producing microalgae response to different culture factors via a systematic analysis. With the current findings and recommendations, the feasibility of producing fucoxanthin commercially could be enhanced and possibly achieve practical and sustainable fucoxanthin production. [ABSTRACT FROM AUTHOR]

Diesel is a fuel commonly used in Antarctica to supply vessels and domestic applications on site. The increasing human activities in the continent consequently have generated high fuel demand, which in turn has increased the occurrence of oil pollution due to accidental events during refueling. A related study received growing interest as more detrimental effects have been reported on Antarctic ecosystems. By adopting the bibliometric analysis, the research on diesel pollution in Antarctica collected in the Scopus database was systematically analysed. An increment in annual publication growth from 1980 to 2019 was observed and two research clusters were illustrated with "hydrocarbons" as the core keyword. Several attempts have been conducted over the past decades to remove anthropogenic hydrocarbon from previous abandoned whaling sites as well as recent oil spill incidents. However, the remote and polar conditions of Antarctica constrained the installation and operation of clean-up infrastructure. This review also briefly encompasses the approaches from past to present on the management of fuel pollution in Antarctica and highlights the potential of phytoremediation as a new bioremediation prospect. [ABSTRACT FROM AUTHOR]

This study focused on the ability of the Antarctic bacterium Rhodococcus sp. strain AQ5-14 to survive exposure to and to degrade high concentrations of phenol at 0.5 g l-1. After initial evaluation of phenol-degrading performance, the effects of salinity, pH and temperature on the rate of phenol degradation were examined. The optimum conditions for phenol degradation were pH 7 and 0.4 g l-1 NaCl at a temperature of 25°C (83.90%). An analysis using response surface methodology (RSM) and the Plackett-Burman design identified salinity, pH and temperature as three statistically significant factors influencing phenol degradation. The maximum bacterial growth was observed (optical density at 600 nm = 0.455), with medium conditions of pH 6.5, 22.5°C and 0.47 g l-1 NaCl in the central composite design of the RSM experiments enhancing phenol degradation to 99.10%. A central composite design was then used to examine the interactions among these three variables and to determine their optimal levels. There was excellent agreement (R2 = 0.9785) between experimental and predicted values, with less strong but still good agreement (R2 = 0.8376) between the predicted model values and those obtained experimentally under optimized conditions. Rhodococcus sp. strain AQ5-14 has excellent potential for the bioremediation of phenol. [ABSTRACT FROM AUTHOR]

Curcuma longa L. is a rhizome plant often used as traditional medicinal preparations in Southeast Asia. The dried powder is commonly known as cure-all herbal medicine with a wider spectrum of pharmaceutical activities. In spite of the widely reported therapeutic applications of C. longa, research on its safety and teratogenic effects on zebrafish embryos and larvae is still limited. Hence, this research aimed to assess the toxicity of C. longa extract on zebrafish. Using a reflux flask, methanol extract of C. longa was extracted and the identification and quantification of total flavonoids were carried out with HPLC. Twelve fertilized embryos were selected to test the embryotoxicity and teratogenicity at different concentration points. The embryos were exposed to the extract in the E3M medium while the control was only exposed to E3M and different developmental endpoints were recorded with the therapeutic index calculated using the ratio of LC50/EC50. C. longa extract was detected to be highly rich in flavonoids with catechin, epicatechin, and naringenin as the 3 most abundant with concentrations of 3,531.34, 688.70, and 523.83μg/mL, respectively. The toxicity effects were discovered to be dose-dependent at dosage above 62.50μg/mL, while, at 125.0μg/mL, mortality of embryos was observed and physical body deformities of larvae were recorded among the hatched embryos at higher concentrations. Teratogenic effect of the extract was severe at higher concentrations producing physical body deformities such as kink tail, bend trunk, and enlarged yolk sac edema. Finally, the therapeutic index (TI) values calculated were approximately the same for different concentration points tested. Overall, the result revealed that plants having therapeutic potential could also pose threats when consumed at higher doses especially on the embryos. Therefore, detailed toxicity analysis should be carried out on medicinal plants to ascertain their safety on the embryos and its development. [ABSTRACT FROM AUTHOR]

Development of in vitro rice shoot regeneration system can contribute to new advances for the selection of stress tolerant cultivars as well as production of elite cultivar through genetic transformation approach. Multiple shoot induction was carried out in two widely cultivated Malaysian indica rice MR 220 and MR 253 using 10 mm rice shoot apex along with coleoptile isolated from 4 days old seedlings. The explants were cultured on a Murashige and Skoog (MS) media supplemented with various concentrations of 6-benzylaminopurine (BAP) and Kinetin (KIN) at (0 - 10 mg/L) for two culture periods 2 and 4 weeks. The results showed that the optimal multiple shoots growth were observed in media supplemented with 6 mg/L KIN, which induced an average (10.30 ± 0.95) shoots for MR 220 and (6.67 ± 0.57) shoots for MR 253. Results from biochemical changes studies indicated that a relatively higher total chlorophyll and soluble protein content were obtained in rice shoots treated with KIN as compared to BAP suggesting KIN is more suitable in the in vitro multiple shoots regeneration system of Malaysian indica rice. [ABSTRACT FROM AUTHOR]

Key message: The oil palm EgPAL1 gene promoter and its regulatory region were functional as a promoter in the heterologous system of Arabidopsis according to the cis-acting elements present in that region. The promoter was developmentally regulated, vascular tissue specific and responsive to water stress agents. Abstract: Phenylalanine ammonia lyase (PAL, EC 4.3.1.24) is the key enzyme of the phenylpropanoid pathway which plays important roles in plant development and adaptation. To date, there is no report on the study of PAL from oil palm ( Elaeis guineensis), an economically important oil crop. In this study, the 5′ regulatory sequence of a highly divergent oil palm PAL gene ( EgPAL1) was isolated and fused with GUS in Arabidopsis to create two transgenic plants carrying the minimal promoter with (2302 bp) and without its regulatory elements (139 bp). The regulatory sequence contained cis-acting elements known to be important for plant development and stress response including the AC-II element for lignin biosynthesis and several stress responsive elements. The promoter and its regulatory region were fully functional in Arabidopsis. Its activities were characterised by two common fundamental features of PAL which are responsive to plant internal developmental programme and external factors. The promoter was developmentally regulated in certain organs; highly active in young organs but less active or inactive in mature organs. The presence of the AC elements and global activity of the EgPAL1 promoter in all organs resembled the property of lignin-related genes. The existence of the MBS element and enhancement of the promoter activity by PEG reflected the behaviour of drought-responsive genes. Our findings provide a platform for evaluating oil palm gene promoters in the heterologous system of Arabidopsis and give insights into the activities of EgPAL1 promoter in oil palm. [ABSTRACT FROM AUTHOR]

Ethylene, the simplest gaseous plant growth regulator (PGR), controls diverse physiological pathways in plants. Under various stress conditions and during different developmental stages, such as root elongation, leaf and flower senescence, seed germination, tissue differentiation and organ abscission, ethylene biosynthesis is significantly increased. In rice, the internal ethylene concentration is rapidly regulated to a genetically, physiologically and morphologically relevant level under various stresses. Regulation of the ethylene signalling pathway under adverse conditions results in up- and/or down-regulation of the expression of stress-related genes in different families. Transcription factors are proteins that influence and control a number of biological processes under both normal and stress conditions. APETALA 2/ethylene response factor (AP2/ERF) is a transcription factor that is considered to function in stress response pathways in rice. To date, many AP2/ERF genes have been functionally characterised in rice. An understanding of the interactions between the AP2/ERF genes and ethylene-dependent mechanisms may provide new insights to facilitate the enhanced adaptation of rice to stress. In the current review, the structure and function of ethylene in rice under normal and stress conditions are described, and then the general functions of the plant AP2/ERF transcription factors are discussed. In addition, the interactions between the AP2/ERF genes and ethylene pathways under abiotic stresses, including submergence, cold, salinity, drought and heavy metal stresses, as well as those under biotic stresses, are summarised. Although the AP2/ERF genes have been identified, information on the physiological mechanisms of this gene family under stress conditions in rice remains limited. Therefore, further physiological studies must be performed in the future to identify additional features of this crucial gene family. [ABSTRACT FROM AUTHOR]

Inflammation and oxidative stress are believed to contribute to the pathology of several chronic diseases including hypercholesterolemia (elevated levels of cholesterol in blood) and atherosclerosis. HMG-CoA reductase inhibitors of plant origin are needed as synthetic drugs, such as statins, which are known to cause adverse effects on the liver and muscles. Amaranthus viridis (A. viridis) has been used from ancient times for its supposedly medically beneficial properties. In the current study, different parts of A. viridis (leaf, stem, and seed) were evaluated for potential anti-HMG-CoA reductase, antioxidant, and anti-inflammatory activities. The putative HMG-CoA reductase inhibitory activity of A. viridis extracts at different concentrations was determined spectrophotometrically by NADPH oxidation, using HMG-CoA as substrate. A. viridis leaf extract revealed the highest HMG-CoA reductase inhibitory effect at about 71%, with noncompetitive inhibition in Lineweaver-Burk plot analysis. The leaf extract showed good inhibition of hydroperoxides, 2,2-diphenyl-1-picrylhydrazyl (DPPH), nitric oxide (NO), and ferric ion radicals in various concentrations. A. viridis leaf extract was proven to be an effective inhibitor of hyaluronidase, lipoxygenase, and xanthine oxidase enzymes. The experimental data suggest that A. viridis leaf extract is a source of potent antioxidant and anti-inflammatory agent and may modulate cholesterol metabolism by inhibition of HMG-CoA reductase. [ABSTRACT FROM AUTHOR]

Genetic structure and biodiversity of the medicinal plant Ficus deltoidea have rarely been scrutinized. To fill these lacunae, five varieties, consisting of 30 F. deltoidea accessions were collected across the country and studied on the basis of molecular and morphological data. Molecular analysis of the accessions was performed using nine Inter Simple Sequence Repeat (ISSR) markers, seven of which were detected as polymorphic markers. ISSR-based clustering generated four clusters supporting the geographical distribution of the accessions to some extent. The Jaccard's similarity coefficient implied the existence of low diversity (0.50-0.75) in the studied population. STRUCTURE analysis showed a low differentiation among the sampling sites, while a moderate varietal differentiation was unveiled with two main populations of F. deltoidea. Our observations confirmed the occurrence of gene flow among the accessions; however, the highest degree of this genetic interference was related to the three accessions of FDDJ10, FDTT16 and FDKT25. These three accessions may be the genetic intervarietal fusion points of the plant's population. Principal Components Analysis (PCA) relying on quantitative morphological characteristics resulted in two principal components with Eigenvalue >1 which made up 89.96% of the total variation. The cluster analysis performed by the eight quantitative characteristics led to grouping the accessions into four clusters with a Euclidean distance ranged between 0.06 and 1.10. Similarly, a four-cluster dendrogram was generated using qualitative traits. The qualitative characteristics were found to be more discriminating in the cluster and PCA analyses, while ISSRs were more informative on the evolution and genetic structure of the population. [ABSTRACT FROM AUTHOR]

Spathoglottis plicata is highly sought after by florists and orchid growers due to its unique structure and colors. However, this orchid is a slow-growing type and thus the planting materials are acutely limited. Therefore, there is a need to improve its multiplication efficiency and speed up its growth in order to meet the market demand. Benzyladenine purine (BAP) has been widely used to improve plantlet multiplication in plant cultures. Polyamines have also been reported to improve the growth and development of in vitro cultures. The objective of this study was to investigate the effects of BAP and different polyamines on the physical and biochemical changes of protocorm-like bodies (PLBs) of S. plicata. Different concentrations of BAP and polyamines (putrescine, spermine, and spermidine) were used. BAP and polyamines were supplemented singly in half-strength MS medium and PLBs were cultured for 2 weeks. It was observed that 5 µM BAP and 25 µM spermidine resulted in the highest fresh weights of 0.38 g and 0.31 g, respectively. The total soluble protein and carbohydrate content for PLBs treated with 25 µM spermidine was 4.85 mg/g FW and 6.36 mg/g FW. A separate experiment was carried out to investigate the interactive effects of 25 µM spermidine with 5 µM BAP. The presence of spermidine in the media reduced the peroxidase and catalase activities by increasing the nitrate reductase activity. [ABSTRACT FROM AUTHOR]

The protoplast system is robust and versatile for plant genetic engineering works. There are various ways to deliver nucleic acid materials into the protoplasts, but polyethylene glycol (PEG)-mediated method offers minimal damage compared to others. Therefore, an established PEG-mediated transformation protocol with optimised parameters is needed to improve the system's reproducibility and reliability. This study utilised oil palm mesophyll protoplasts as transformation cells and the red fluorescent protein (DsRED) as a visual reporter. Based on the transformation efficiency scored after 72 h, a method with the following parameters: 5 min incubation in 35% PEG, 10 min incubation with 50 µg DNA, and 90 s heat-shock treatment at 42 °C was found to be the best for oil palm protoplast PEG-mediated transfection. A significant improvement in transformation efficiency at about 56% was achieved using this method compared to the previous study (5%). This newly developed protocol was then used to evaluate the efficiency in terms of the relative strength of 7 promoters, including two plant constitutive promoters, three oil palm constitutive promoters, and two oil palm tissue-specific promoters in regulating the expression of the transgene in oil palm. Based on the results from three individual replicates, CaMV35S showed to be the most efficient amongst the tested promoters in driving the transgene expression in oil palm mesophyll protoplasts, followed by oil palm translationally control tumour protein (TCTP) and maize-ubiquitin (Ubi1) promoters. [Display omitted] • An efficient PEG-mediated transformation of oil palm mesophyll protoplasts. • High transformation efficiency compared to the previous protocol. • A reliable and reproducible oil palm protoplast-based transient gene expression assay. • The CaMV35S promoter was efficient for transgene expression in oil palm protoplasts. [ABSTRACT FROM AUTHOR]

Phytocystatin, a type of protease inhibitor (PI), plays major roles in plant defense mechanisms and has been reported to show antipathogenic properties and plant stress tolerance. Recombinant plant PIs are gaining popularity as potential candidates in engineering of crop protection and in synthesizing medicine. It is therefore crucial to identify PI from novel sources like Curcuma longa as it is more effective in combating against pathogens due to its novelty. In this study, a novel cDNA fragment encoding phytocystatin was isolated using degenerate PCR primers, designed from consensus regions of phytocystatin from other plant species. A full-length cDNA of the phytocystatin gene, designated CypCl, was acquired using 5/3 rapid amplification of cDNA ends method and it has been deposited in NCBI database (accession number KF545954.1). It has a 687 bp long open reading frame (ORF) which encodes 228 amino acids. BLAST result indicated that CypCl is similar to cystatin protease inhibitor from Cucumis sativus with 74% max identity. Sequence analysis showed that CypCl contains most of the motifs found in a cystatin, including a G residue, LARFAV-, QxVxG sequence, PW dipeptide, and SNSL sequence at C-terminal extension. Phylogenetic studies also showed that CypCl is related to phytocystatin from Elaeis guineensis. [ABSTRACT FROM AUTHOR]

Agricultural sorbents have received attention for their effectiveness in oil removal. In Malaysia, oil palm's empty fruit bunch (EFB) spikelets are an abundant agricultural waste that provides a non-toxic, renewable resource of cellulosic materials. In this study, the effectiveness of EFB spikelets to remove oil spills from seawater pollution in a filter system was investigated and the best optimisation approach for filtering conditions was determined. Experiments for oil spill clean-up were performed using a filter-based oil sorption system with a series of conditions such as temperature, time, packing density, and oil concentration to evaluate sorption capacity, oil and water absorbed efficiency. Fourier transform infrared spectroscopy (FTIR) was used to characterise the physicochemical properties of untreated and treated EFB fibres. Based on one-factor-at -a-time (OFAT) analysis conducted at 160 °C for 30 min on 0.1 g/cm3 of packing density containing 25% diesel, 8.667 mL of oil and 5 mL of water was absorbed. In response surface methodology (RSM), the three parameters of temperature, packing density and diesel concentration were observed as significant. From RSM fitting model analysis, the predicted value obtained for both oil and water absorbed were 8.805 and 5.213 mL, respectively. The experimental RSM values of 9 and 5 mL of oil and water absorbed were obtained. The result demonstrated the validity of the model as the experimental RSM values were close to the RSM model's prediction. As compared to OFAT, the RSM method is more efficient in oil removal. This research contributes to a better knowledge of the usage of a natural sorbent as a method of diesel pollution remediation. [ABSTRACT FROM AUTHOR]

Oil pollution such as diesel poses a significant threat to the environment. Due to this, there is increasing interest in using natural materials mainly from agricultural waste as organic oil spill sorbents. Oil palm's empty fruit bunch (EFB), a cost-effective material, non-toxic, renewable resource, and abundantly available in Malaysia, contains cellulosic materials that have been proven to show a good result in pollution treatment. This study evaluated the optimum screening part of EFB that efficiently absorbs oil and the physicochemical characterisation of untreated and treated EFB fibre using Fourier Transform Infrared Spectroscopy (FTIR) and Scanning Electron Microscopy (SEM). The treatment conditions were optimised using one-factor-at-a-time (OFAT), which identified optimal treatment conditions of 170 °C, 20 min, 0.1 g/cm3, and 10% diesel, resulting in 23 mL of oil absorbed. The predicted model was highly significant in statistical Response Surface Methodology (RSM) and confirmed that all the parameters (temperature, time, packing density, and diesel concentration) significantly influenced the oil absorbed. The predicted values in RSM were 175 °C, 22.5 min, 0.095 g/cm3, and 10%, which resulted in 24 mL of oil absorbed. Using the experimental values generated by RSM, 175 °C, 22.5 min, 0.095 g/cm3, and 10%, the highest oil absorption achieved was 24.33 mL. This study provides further evidence, as the data suggested that RSM provided a better approach to obtain a high efficiency of oil absorbed. [ABSTRACT FROM AUTHOR]

Pesticide treatment dramatically reduces crop loss and enhances agricultural productivity, promoting global food security and economic growth. However, owing to high accrual and persistent tendency, pesticides could create significant ecological consequences when used often. Lately, the perspective has transitioned to implementing biological material, environmentally sustainable, and economical strategies via bioremediation approaches to eradicate pesticides contaminations. Microalgae were regarded as a prominent option for the detoxification of such hazardous contaminants. Sustainable application and remediation strategies of pesticides pollutants in the agriculture system by microalgae from the past studies, and recent advancements were integrated into this review. Bibliometric strategies to enhance the research advancements in pesticide bioremediation by microalgae between 2010 and 2020 were implemented through critical comparative analysis of documents from Scopus and PubMed databases. As a result, this study identified a growing annual research trend from 1994 to 2020 (nScopus > nPubMed). Global production of pesticide remediation by microalgae demonstrated significant contributions from India (23.8%) and China (16.7%). The author's keyword clustering was visualized using bibliometric software (VOSviewer), which revealed the strongest network formed by "microalgae", "bioremediation", "biodegradation", "cyanobacteria", "wastewater", and "pesticide" as significant to the research topic. Hence, this bibliometric review will facilitate the future roadmap for many scholars and authors who were drawing attention to the burgeoning research on bioremediation of pesticides to counteract environmental impacts while maintaining food sustainability. [ABSTRACT FROM AUTHOR]

• An efficient protocol for protoplasts isolation from in vitro leaf and mesocarp of oil palm has been established. • Enzymes composition effect on the yield and viability of protoplast are significant. • Scraping the waxy layer on oil palm leaf increased the protoplast isolation efficiency. • Vacuum treatment enhanced the penetration of enzymes into tissues. • 10% ficoll in 0.6 M mannitol improved the separation of protoplasts from impurities. The absence of a cell wall on the protoplast contributes to its versatility. Its flexibility for DNA manipulation and the possibility of rapid cell-based assay is desirable in the plant biotechnology field. This study was carried out to improve protoplast isolation from oil palm in vitro leaf and mesocarp tissues. The factors affecting protoplast isolation efficiency were optimized, including the protocols and enzyme composition involved, focusing on the oil palm in vitro leaf first. Incubation of oil palm leaf sample with an enzyme mixture of cellulase R-10, macerozyme R-10, driselase, and pectolyase Y-23, for 14 h has successfully produced up to 2.5 × 106 protoplasts g-1 fresh weight (FW)-1 with 95% viability. Incubation of oil palm mesocarp tissue with the optimized enzyme mixture for 2 h at static condition has also successfully produced 3.98 × 106 protoplasts g-1 FW-1 with 85% viability. Besides, it was found that increasing the sample's surface area in contact with enzyme solution by slicing the samples into narrow strips and thin layers has improved the penetration of enzymes into the tissues and enhanced the isolation efficiency. In addition, a plasmolysis step before enzymatic treatment has also improved the protoplast viability by minimizing the damage incurred during isolation. The successful isolation of protoplast from oil palm leaf and mesocarp has enabled the study of gene function and the characterization of endogenous tissue-specific promoter being carried out in vivo. [ABSTRACT FROM AUTHOR]

One of the most severe environmental issues affecting the sustainable growth of human society is water pollution. Phenolic compounds are toxic, hazardous and carcinogenic to humans and animals even at low concentrations. Thus, it is compulsory to remove the compounds from polluted wastewater before being discharged into the ecosystem. Biotechnology has been coping with environmental problems using a broad spectrum of microorganisms and biocatalysts to establish innovative techniques for biodegradation. Biological treatment is preferable as it is cost-effective in removing organic pollutants, including phenol. The advantages and the enzymes involved in the metabolic degradation of phenol render the efficiency of microalgae in the degradation process. The focus of this review is to explore the trends in publication (within the year of 2000–2020) through bibliometric analysis and the mechanisms involved in algae phenol degradation. Current studies and publications on the use of algae in bioremediation have been observed to expand due to environmental problems and the versatility of microalgae. VOSviewer and SciMAT software were used in this review to further analyse the links and interaction of the selected keywords. It was noted that publication is advancing, with China, Spain and the United States dominating the studies with total publications of 36, 28 and 22, respectively. Hence, this review will provide an insight into the trends and potential use of algae in degradation. [ABSTRACT FROM AUTHOR]

Since the heroic age of Antarctic exploration, the continent has been pressurized by multiple anthropogenic activities, today including research and tourism, which have led to the emergence of phenol pollution. Natural attenuation rates are very slow in this region due to the harsh environmental conditions; hence, biodegradation of phenol using native bacterial strains is recognized as a sustainable remediation approach. The aim of this study was to analyze the effectiveness of phenol degradation by a binary consortium of Antarctic soil bacteria, Arthrobacter sp. strain AQ5-06, and Arthrobacter sp. strain AQ5-15. Phenol degradation by this co-culture was statistically optimized using response surface methodology (RSM) and tolerance of exposure to different heavy metals was investigated under optimized conditions. Analysis of variance of central composite design (CCD) identified temperature as the most significant factor that affects phenol degradation by this consortium, with the optimum temperature ranging from 12.50 to 13.75 °C. This co-culture was able to degrade up to 1.7 g/L of phenol within seven days and tolerated phenol concentration as high as 1.9 g/L. Investigation of heavy metal tolerance revealed phenol biodegradation by this co-culture was completed in the presence of arsenic (As), aluminum (Al), copper (Cu), zinc (Zn), lead (Pb), cobalt (Co), chromium (Cr), and nickel (Ni) at concentrations of 1.0 ppm, but was inhibited by cadmium (Cd), silver (Ag), and mercury (Hg). [ABSTRACT FROM AUTHOR]

Rice straw, an agricultural waste product generated in huge quantities worldwide, is utilized to remediate diesel pollution as it possesses excellent characteristics as a natural sorbent. This study aimed to optimize factors that significantly influence the sorption capacity and the efficiency of oil absorption from diesel-polluted seawater by rice straw (RS). Spectroscopic analysis by attenuated total reflectance infrared (ATR-IR) spectroscopy and surface morphology characterization by variable pressure scanning electron microscopy (VPSEM) and energy-dispersive X-ray microanalysis (EDX) were carried out in order to understand the sorbent capability. Optimization of the factors of temperature pre-treatment of RS (90, 100, 110, 120, 130 or 140 °C), time of heating (10, 20, 30, 40, 50, 60 or 70 min), packing density (0.08, 0.10, 0.12, 0.14 or 0.16 g cm−3) and oil concentration (5, 10, 15, 20 or 25% (v/v)) was carried out using the conventional one-factor-at-a-time (OFAT) approach. To eliminate any non-significant factors, a Plackett–Burman design (PBD) in the response surface methodology (RSM) was used. A central composite design (CCD) was used to identify the presence of significant interactions between factors. The quadratic model produced provided a very good fit to the data (R2 = 0.9652). The optimized conditions generated from the CCD were 120 °C, 10 min, 0.148 g cm−3 and 25% (v/v), and these conditions enhanced oil sorption capacity from 19.6 (OFAT) to 26 mL of diesel oil, a finding verified experimentally. This study provides an improved understanding of the use of a natural sorbent as an approach to remediate diesel pollution. [ABSTRACT FROM AUTHOR]

Oil spill incidents are hazardous and have prolonged damage to the marine environment. Management and spill clean-up procedures are practical and rapid, with several shortcomings. Coco peat (CP) and coco fibre (CF) are refined from coconut waste, and their abundance makes them desirable for diesel spillage treatment. Using a filter-based system, the selectivity of coco peat sorbent was tested using CP, CF and peat-fibre mix (CPM). CP exhibited maximal diesel sorption capacity with minimal seawater uptake, thus being selected for further optimisation analysis. The heat treatment considerably improved the sorption capacity and efficiency of diesel absorbed by CP, as supported by FTIR and VPSEM–EDX analysis. Conventional one-factor-at-a-time (OFAT) examined the performance of diesel sorption by CP under varying parameters, namely temperature, time of heating, packing density and diesel concentration. The significant factors were statistically evaluated using response surface methodology (RSM) via Plackett–Burman design (PB) and central composite design (CCD). Three significant (p < 0.05) factors (time, packing density and diesel concentration) were identified by PB and further analysed for interactions among the parameters. CCD predicted efficiency of diesel absorbed at 59.92% (71.90 mL) (initial diesel concentration of 30% v/v) and the experimental model validated the design with 59.17% (71.00 mL) diesel sorbed at the optimised conditions of 14.1 min of heating (200 °C) with packing density of 0.08 g/cm3 and 30% (v/v) of diesel concentration. The performance of CP in RSM (59.17%) was better than that in OFAT (58.33%). The discoveries imply that natural sorbent materials such as CP in oil spill clean-up operations can be advantageous and environmentally feasible. This study also demonstrated the diesel-filter system as a pilot study for the prospective up-scale application of oil spills. [ABSTRACT FROM AUTHOR]

Phycobiliproteins are gaining popularity as long-term, high-value natural products which can be alternatives to synthetic products. This study analyzed research trends of phycobiliproteins from 1909 to 2020 using a bibliometric approach based on the Scopus database. The current findings showed that phycobiliprotein is a burgeoning field in terms of publications outputs with "biochemistry, genetics, and molecular biology" as the most related and focused subject. The Journal of Applied Phycology was the most productive journal in publishing articles on phycobiliproteins. Although the United States of America (U.S.A.) contributed the most publications on phycobiliproteins, the Chinese Academy of Sciences (China) is the institution with the largest number of publications. The most productive author on phycobiliproteins was Glazer, Alexander N. (U.S.A.). The U.S.A. and Germany were at the forefront of international collaboration in this field. According to the keyword analysis, the most explored theme was the optimization of microalgae culture parameters and phycobiliproteins extraction methods. The bioactivity properties and extraction of phycobiliproteins were identified as future research priorities. Synechococcus and Arthrospira were the most cited genera. This study serves as an initial step in fortifying the phycobiliproteins market, which is expected to exponentially expand in the future. Moreover, further research and global collaboration are necessary to commercialize phycobiliproteins and increase the consumer acceptability of the pigments and their products. [ABSTRACT FROM AUTHOR]

Imperata cylindrica, often known as cogon grass, is a low-cost and useful sorbent for absorbing oil and optimising processes. The effects of temperature, time, packing density and oil concentration on oil absorption efficiency were investigated and optimised utilising one-factor-at-a-time (OFAT) and response surface methodology (RSM) approaches. Temperature and oil concentration are two important variables in the oil absorption process. Fourier transform infrared spectroscopy (FTIR) and scanning electron microscopy (SEM) analysis were used to characterise cogon grass. After treatment and oil absorption, the FTIR method indicated new formation and deformation of functional groups, while SEM revealed changes in the surface and texture of cogon grass, including a roughened and jagged surface. Validation of the RSM model yielded 93.54% efficiency with 22.45 mL oil absorbed at 128 °C temperature and 36 (v/v)% oil concentration while keeping packing density and time constant at 30 min and 0.20 g/cm3, respectively. This study may provide an insight into the usefulness of a statistical approach to maximise the oil absorption of cogon grass as an oil sorbent. [ABSTRACT FROM AUTHOR]