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The genus Laoennea (Streptaxoidea, Diapheridae) was erected by Páll-Gergely, 2020. The type species, Laoennea carychioides Páll-Gergely, A. Reischütz & Maassen, 2020 is so far only known from the type locality cave in Laos. Herein, we describe a second species, Laoennea renouardisp. nov., from a nearby cave in the same karst region of Vientiane Province.

Our objective is to analyse global‐scale patterns of mountain biodiversity and the driving forces leading to the observed patterns. More specifically, we test the ‘mountain geobiodiversity hypothesis’ (MGH) which is based on the assumption that it is not mountain‐uplift alone which drives the evolution of mountain biodiversity, but rather the combination of geodiversity evolution and Neogene and Pleistocene climate changes. We address the following questions: (a) Do areas of high geodiversity and high biodiversity in mountains overlap, that is can mountain geodiversity predict mountain biodiversity? (b) What is the role of Pleistocene climate change in shaping mountain biodiversity? (c) Did diversification rate shifts occur predominantly with the onset of more pronounced climate fluctuations in the late Neogene and Pleistocene fostering a ‘species pump’ effect, as predicted by the MGH?

The structure and sequence of plastid genomes is highly conserved across most land plants, except for a minority of lineages that show gene loss and genome degradation. Understanding the early stages of plastome degradation may provide crucial insights into the repeatability and predictability of genomic evolutionary trends. We investigated these trends in subtribe Gentianinae of the Gentianaceae, which encompasses ca. 450 species distributed around the world, particularly in alpine and subalpine environments. We sequenced, assembled, and annotated the plastomes of 41 species, representing all six genera in subtribe Gentianinae and all main sections of the species‐rich genus Gentiana L. We reconstructed the phylogeny, estimated divergence times, investigated the phylogenetic distribution of putative gene losses, and related these to substitution rate shifts and species’ habitats. We obtained a strongly supported topology consistent with earlier studies, with all six genera in Gentianinae recovered as monophyletic and all main sections of Gentiana having full support. While closely related species have very similar plastomes in terms of size and structure, independent gene losses, particularly of the ndh complex, have occurred in multiple clades across the phylogeny. Gene loss was usually associated with a shift in the boundaries of the small single‐copy and inverted repeat regions. Substitution rates were variable between clades, with evidence for both elevated and decelerated rate shifts. Independent lineage‐specific loss of ndh genes occurred at a wide range of times, from Eocene to Pliocene. Our study illustrates that diverse degradation patterns shape the evolution of the plastid in this species‐rich plant group., This study traces plastome evolution of all main lineages of the species‐rich group Gentianinae, and shows lineage‐specific patterns of plastid degradation and shifts in substitution rates.

The Qinghai-Tibet Plateau sensu lato (QTP s.l.) harbors an exceptionally high biodiversity, especially at its southeastern margin: this area encompasses the Hengduan Mountains and the eastern Himalayas, which have been listed as biodiversity hotspots. To the contrary, the plateau interior (namely the Qinghai-Tibet Plateau sensu stricto, QTP s.s.) is relatively species-poor because of its particularly harsh climate. With contrasting geological histories and environmental conditions of the Hengduan Mountains, the Himalayas and the QTP s.s., it would be expected that floristic compositions and diversity patterns of these three regions would differ between each other. To compare the floristic diversity of these three regions, we assembled data on seed plant’s distribution in the three regions based on county-level mapping from published monographs and online databases, and we then analyzed their floristic features and species diversity patterns (horizontal and elevational). We found that the Hengduan Mountains hosted the most seed plant species (8,439), as expected. The highest percentage of shrub (22.88%) and tree species (9.80%) were in the Himalayas, whereas herbaceous species (81.50%) were relatively more prominent in the QTP s.s.. The Hengduan Mountains also had the most species-rich genera (10) with more than 50% of their total species diversity in China. Also, temperate genera dominated across these three regions, with a highest percentage (77.61%) within the QTP s.s.. Across the QTP s.l., species diversity gradually decreased from the southeastern part to the northwest, and most of seed plants were distributed in the southern and eastern margin of the Hengduan Mountains and East Himalayas. Along elevational gradients, species richness all demonstrated a hump-shape curve, but the most species-rich elevation zone differed for each type of life-form across the three regions. Our study sets a base for exploring the origin and evolution of mountain taxa, as well as provides a snapshot of the current plant distribution, which will certainly be modified by climate change.

Encompassing some of the major hotspots of biodiversity on Earth, large mountain systems have long held the attention of evolutionary biologists. The region of the Qinghai‐Tibet Plateau (QTP) is considered a biogeographic source for multiple colonization events into adjacent areas including the northern Palearctic. The faunal exchange between the QTP and adjacent regions could thus represent a one‐way street (“out of” the QTP). However, immigration into the QTP region has so far received only little attention, despite its potential to shape faunal and floral communities of the QTP. In this study, we investigated centers of origin and dispersal routes between the QTP, its forested margins and adjacent regions for five clades of alpine and montane birds of the passerine superfamily Passeroidea. We performed an ancestral area reconstruction using BioGeoBEARS and inferred a time‐calibrated backbone phylogeny for 279 taxa of Passeroidea. The oldest endemic species of the QTP was dated to the early Miocene (ca. 20 Ma). Several additional QTP endemics evolved in the mid to late Miocene (12–7 Ma). The inferred centers of origin and diversification for some of our target clades matched the “out of Tibet hypothesis’ or the “out of Himalayas hypothesis” for others they matched the “into Tibet hypothesis.” Three radiations included multiple independent Pleistocene colonization events to regions as distant as the Western Palearctic and the Nearctic. We conclude that faunal exchange between the QTP and adjacent regions was bidirectional through time, and the QTP region has thus harbored both centers of diversification and centers of immigration., The Qinghai‐Tibet Plateau (QTP) is considered a source region for colonization of adjacent areas such as the northern Palearctic. Using an ancestral area reconstruction approach on a phylogeny of 279 bird species, we suggest that faunal exchange between the QTP and adjacent regions was bidirectional through time and the QTP region has harbored both centers of diversification (for example of snowfinches) and centers of immigration.

Two heterobranch species, Stylocheilus striatus (Quoy & Gaimard, 1825) (Anaspidea, Aplysiidae) and Pleurobranchusforskalii Rüppel & Leuckart, 1828 (Nudipleura, Pleurobranchidae) are reported for the first time for BazarutoIsland, Mozambique. Swarming behavior of Stylocheilus striatus, which was previously described for other localities,was also observed for the first time in the Bazaruto Archipelago. The sea slugs were photographed in situ and identifiedin sync with their species descriptions, photographic databases and the current literature.

A plethora of studies investigating the origin and evolution of diverse mountain taxa has assumed a causal link between geological processes (orogenesis) and a biological response (diversification). Yet, a substantial delay (up to 30 Myr) between the start of orogenesis and diversification is often observed. Evolutionary biologists should therefore identify alternative drivers of diversification and maintenance of biodiversity in mountain systems. Using phylogenetic, biogeographic, and diversification rate analyses, we could identify two independent processes that most likely explain the diversity of the widespread genus Allium in the Qinghai–Tibet Plateau (QTP) region: (1) While the QTP-related taxa of the subgenus Melanocrommyum diversified in situ , (2) QTP-related taxa of other subgenera migrated into the QTP from multiple source areas. Furthermore, shifts in diversification rates within Allium could not be attributed spatially and temporally to the uplift history of the QTP region. Instead, global cooling and climate oscillations in the Quaternary were major contributors to increased speciation rates in three clades of Allium . Our study therefore adds to the growing evidence supporting the “mountain-geo-biodiversity hypothesis”, which highlights the role of climate oscillations for the diversification of mountain organisms.

The origin and evolution of alpine biota are not yet fully understood, particularly in the vast Asian mountain regions. In addition, in these regions, most studies have concentrated on taxa occurring in areas benefitting from relatively generous rainfall from the summer monsoon. In this study, we collected a large number of Oxytropis species throughout their distribution range, and investigated the taxonomy and evolution of this diverse legume genus, which also occurs in mountainous areas prone to drought. Using nuclear (ITS) and plastid (trnL‐F) markers, we reconstructed phylogenetic relationships within Oxytropis, conducting maximum parsimony, fasttree‐like, maximum likelihood, Bayesian, and BEAST analyses. We also used Anchored Hybrid Enrichment (AHE) to test the power of this method to resolve relationships among a small subset of Oxytropis species. For AHE, we sampled eight species and obtained 527 low‐copy and orthologous nuclear loci. We show that the taxonomy of this genus that radiated explosively in Asian mountains will remain recalcitrant based on conventional molecular methods. Because of a severe lack of resolution, none of the available taxonomic treatments for Oxytropis could either be confirmed or refuted based upon ITS and trnL‐F. Nevertheless, we confirm the status of several species, and identify morphological or genetic particularities for some groups of species. The AHE approach yielded a highly supported phylogenetic tree, suggesting that increased taxon sampling coupled with AHE methods promise advances in the study of the taxonomy and evolution of Oxytropis, thus providing further analytical opportunities, such as diversification rate and biogeographical analyses.

New species arise through the evolution of reproductive barriers between formerly interbreeding lineages. Yet, comprehensive assessments of potential reproductive barriers, which are needed to make inferences on processes driving speciation, are only available for a limited number of systems. In this study, we estimated individual and cumulative strengths of seven prezygotic and six postzygotic reproductive barriers between the recently diverged taxa Silene dioica (L.) Clairv. and S. latifolia Poiret using both published and new data. A combination of multiple partial reproductive barriers resulted in near‐complete reproductive isolation between S. dioica and S. latifolia, consistent with earlier estimates of gene flow between the taxa. Extrinsic barriers associated with adaptive ecological divergence were most important, while intrinsic postzygotic barriers had moderate individual strength but contributed only little to total reproductive isolation. These findings are in line with ecological divergence as driver of speciation. We further found extensive variation in extrinsic reproductive isolation, ranging from sites with very strong selection against migrants and hybrids to intermediate sites where substantial hybridization is possible. This situation may allow for, or even promote, heterogeneous genetic divergence.

Aim Geologically dynamic areas often harbour remarkable levels of biodiversity. Among other factors, mountain building is assumed to be a precondition for species radiation, and yet, the potential role of immigration as a source of biodiversity prior to radiation is often neglected. Here, we studied the biogeographical history of the large genus Saxifraga to unravel the role played by the Qinghai-Tibet Plateau (QTP) for the diversification of this genus and to understand factors that have led to the establishment of high biodiversity in and around this region. Location QTP and surrounding mountain ranges and worldwide distribution range of Saxifraga. Methods Using a total of 420 taxa (321 ingroup taxa) comprising more than 60% of extant Saxifraga species, we studied the evolutionary history of Saxifraga by performing phylogenetic analyses (maximum likelihood and Bayesian inference on nuclear ITS and plastid trnL–trnF, matK sequences), divergence time estimation (using uncorrelated log-normal clock models and four fossil constraints in beast) and ancestral range estimation (using BioGeoBEARS). Results Saxifraga originated in North America around 74 (64–83) Ma, dispersed to South America and northern Asia during its early diversification and colonized Europe and the QTP region by the Late Eocene. The QTP region was colonized several times independently, followed in some lineages by rapid radiations, temporally coinciding with recent uplifts of the Hengduan Mountains at the southeastern fringe of the QTP. Subsequently, several lineages dispersed out of Tibet. Main conclusions Immigration, recent rapid radiation and lineage persistence were all important processes for the establishment of a rich species stock of Saxifraga in the QTP region. Because floristic exchanges between the neighbouring areas and the QTP region were bi-directional, the spatio-temporal evolution of Saxifraga contrasts with the ‘out of QTP’ pattern, which has often been assumed for northern temperate plants.

Aim We investigated the historical biogeography and diversification of Gentiana L. (Gentianaceae). Our study depicts the origin and dispersal routes of this alpine genus, and the role of the uplift of the Qinghai–Tibet Plateau (QTP) and past climate changes as triggers for its diversification. Location Tibeto-Himalayan region and world-wide mountain habitats. Methods Our sampling represents more than 50% of the extant Gentiana species, including all sections across their entire geographical ranges. We investigated the evolutionary history of Gentiana using phylogenetic reconstructions (maximum likelihood and Bayesian inference) of ITS, atpB–rbcL and trnL–trnF sequences, as well as molecular dating with beast. We tested two approaches of ancestral area reconstructions (DEC, DIVA) in BioGeoBEARS and investigated diversification rates using BAMM. Results The common ancestor of Gentiana and subtribe Gentianinae lived in the QTP region at around 34 (25–45) million years ago (Ma), and 40 (29–52) Ma respectively. From the surroundings of the QTP, Gentiana lineages dispersed to eastern China, Taiwan, Europe, North and South America, Australia and New Guinea, from mid-Miocene onward (c. 15 Ma–present), with only one older dispersal event to Europe (c. 37–21 Ma). Diversification rates gradually increased over time, and two switches of diversification rates were identified in Gentianinae (c. 7 Ma, simultaneously in the Pneumonanthe/Cruciata lineage and in Tripterospermum). Main conclusions Gentiana existed in the QTP region throughout most of its uplift history following the India-Asia collision. This region acted as the primary source area for dispersals to many areas of the world. Because steady increase in diversification rates coincides with the extension of the QTP, we argue that the museum theory rather than the explosive radiation theory prevails for gentians in this region, although rare shifts of diversification rates are associated with niche shifts across the alpine/subalpine ecotone.

Two new varieties of Kuepferia pringlei D. Maity & S. K. Dey from north Sikkim (eastern Himalaya) are described, illustrated, and compared with closely related taxa of similar morphology. Details on its habitat, phenology and conservation status are provided. These previously undescribed varieties are most similar to, but distinct from, typical K. pringlei D. Maity & S. K. Dey, known from the eastern Himalaya. Both new taxa are compared with K. leucantha (Harry Sm. ex T.N. Ho & S.W. Liu) Adr.Favre.

Premise of the study Geological and climatic changes associated with the uplift of the Qinghai-Tibet Plateau (QTP) have been suggested as drivers for biological diversification locally and in neighboring regions. To test this hypothesis, we investigated the niche evolution of Tripterospermum (Gentianaceae) and related Asian genera through time. Methods We conducted Species Distribution Modeling using Maximum Entropy Modeling (MaxEnt). Furthermore, we performed stochastic character mapping and produced disparity-through-time plots, and examined putative key innovations using the binary state speciation and extinction approach (BISSE). Key results Kuepferia and Sinogentiana prefer the coolest and driest habitat, having rather conserved niches. Despite a tendency for niche evolution, Crawfurdia and Metagentiana are probably restricted to a narrow distribution range because of their poor dispersal ability. In contrast, Tripterospermum has the broadest niche and occurs under the warmest and wettest conditions. A higher degree of niche evolution and a more efficient dispersal mechanism allowed this genus to diversify more and occupy a broader distribution range. Conclusions The QTP genera producing dry capsules, whether displaying niche conservatism (Kuepferia and Sinogentiana) or a tendency for niche evolution (Crawfurdia and Metagentiana), are less species-rich and have a more restricted distribution than Tripterospermum (stronger niche evolution and berry-like fruits). The evolution of berry-like fruits corresponds to increased speciation rates, and could therefore be viewed as a key innovation. In contrast to the majority of studies on plants occurring around the QTP, we find that speciation was probably mediated by niche breadth and dispersal ability rather than geophysical changes.

Five years ago, the Panamanian evolutionary lineage (EL) C12 was uncovered along with four other ELs in an integrative phylogenetic investigation of worldwide Carychiidae. Since EL C12 lacked shell material post-molecular analysis to serve as a museum voucher, it remained undescribed. Now, after recent collection efforts of C12 and the congener, Carychiumzarzaae Jochum & Weigand, 2017 at their original Panamanian sites, C12 is morphologically described and formally assigned the name, Carychiumpanamaense Jochum, sp. n. In sync with recent taxonomic treatment of the genus, computed tomography (CT) is used in this work to differentiate shells of C.panamaensesp. n. from geographically-proximal, Caribbean, North and Central American congeners. Recent material of topotypic Carychiumjardineanum (Chitty, 1853) and undamaged C.zarzaae were additionally CT-scanned and assessed in the comparative analyses.

Species differences are maintained by the cumulative effect of factors that reduce gene flow between divergent lineages. In this issue, Karrenberg et al. quantify multiple genetic and environmental barriers to gene exchange between two closely related plant species and find that adaptation to divergent environments has the greatest effect on reproductive isolation.

AIM: We investigated the biogeography of the subtropical mountain genus Tripterospermum Blume (Gentianaceae), disjunctly distributed at the southern fringe of the Qinghai–Tibetan Plateau (QTP) and other mountain systems within the biodiversity hotspots of Southeast Asia. This study reveals dispersal routes among these areas. LOCATION: East China, Indochina, Japan, the Philippines, southeastern fringe of the Qinghai–Tibetan Plateau (southern Himalaya and Hengduanshan), Taiwan, Wallacea. METHODS: The evolutionary history of Tripterospermum was studied using the phylogenetic reconstructions (Maximum Likelihood and Bayesian Inference using ITS, atpB–rbcL and trnL–trnF), molecular dating (using BEAST with a relaxed clock model and fossil constraints), and two approaches of ancestral area reconstructions (DEC, S‐DIVA). Our sampling design included 82% of the extant species of subtropical Gentianinae (Tripterospermum, Metagentiana, Sinogentiana and Crawfurdia) as ingroup, and Kuepferia, Gentiana and other Gentianaceae genera as outgroups. RESULTS: Subtropical Gentianinae originated at the southeastern fringe of the QTP (the southern Himalaya and Hengduanshan) between 16 and 35 million years ago (Ma). With a crown age estimated to be 2.7–8.8 million years (Myr), Tripterospermum originated at the southeastern fringe of the QTP, from where it dispersed to East China, Indochina, Sundaland, Taiwan, Japan and Wallacea. MAIN CONCLUSIONS: For Tripterospermum, the southern Himalaya and the Hengduanshan have acted as a source area for the colonization of East and Southeast Asia. This study depicts dispersal routes among the biodiversity hotspots neighbouring the QTP and those located on Sundaland and Wallacea. Mountain plants seem to have colonized Wallacea using a northern route via Taiwan rather than a more southern route via Sundaland. The latter route has previously been recorded for many lowland lineages. Because Tripterospermum species‐producing berries have dispersed more often across geographical barriers than those producing capsules, we hypothesize that avian transportation of berry‐like fruits might have facilitated their dispersal.

Biodiversity is unevenly distributed on Earth and hotspots of biodiversity are often associated with areas that have undergone orogenic activity during recent geological history (i.e. tens of millions of years). Understanding the underlying processes that have driven the accumulation of species in some areas and not in others may help guide prioritization in conservation and may facilitate forecasts on ecosystem services under future climate conditions. Consequently, the study of the origin and evolution of biodiversity in mountain systems has motivated growing scientific interest. Despite an increasing number of studies, the origin and evolution of diversity hotspots associated with the Qinghai-Tibetan Plateau (QTP) remains poorly understood. We review literature related to the diversification of organisms linked to the uplift of the QTP. To promote hypothesis-based research, we provide a geological and palaeoclimatic scenario for the region of the QTP and argue that further studies would benefit from providing a complete set of complementary analyses (molecular dating, biogeographic, and diversification rates analyses) to test for a link between organismic diversification and past geological and climatic changes in this region. In general, we found that the contribution of biological interchange between the QTP and other hotspots of biodiversity has not been sufficiently studied to date. Finally, we suggest that the biological consequences of the uplift of the QTP would be best understood using a meta-analysis approach, encompassing studies on a variety of organisms (plants and animals) from diverse habitats (forests, meadows, rivers), and thermal belts (montane, subalpine, alpine, nival). Since the species diversity in the QTP region is better documented for some organismic groups than for others, we suggest that baseline taxonomic work should be promoted.

Summary In order to investigate the role of differential adaptation for the evolution of reproductive barriers, we conducted a multi-site transplant experiment with the dioecious sister species Silene dioica and S. latifolia and their hybrids. Crosses within species as well as reciprocal first-generation (F1) and second-generation (F2) interspecific hybrids were transplanted into six sites, three within each species' habitat. Survival and flowering were recorded over 4 yr. At all transplant sites, the local species outperformed the foreign species, reciprocal F1 hybrids performed intermediately and F2 hybrids underperformed in comparison to F1 hybrids (hybrid breakdown). Females generally had slightly higher cumulative fitness than males in both within- and between-species crosses and we thus found little evidence for Haldane's rule acting on field performance. The strength of selection against F1 and F2 hybrids as well as hybrid breakdown increased with increasing strength of habitat adaptation (i.e. the relative fitness difference between the local and the foreign species) across sites. Our results suggest that differential habitat adaptation led to ecologically dependent post-zygotic reproductive barriers and drives divergence and speciation in this Silene system.