1. Epitranscriptomic 5-Methylcytosine Profile in PM2.5-induced Mouse Pulmonary Fibrosis
- Author
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Wenjun Ding, Hanchen Liu, Bao-Fa Sun, Chunyan Wu, Xiao Han, Zezhong Zhang, Wen-Lan Yang, Fang Zhang, Yun-Gui Yang, Yongliang Zhao, Guibin Jiang, and Xueying Liu
- Subjects
Inflammation ,complex mixtures ,Biochemistry ,CHI3L1 ,Pulmonary fibrosis ,Pathogenesis ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Fibrosis ,Genetics ,medicine ,Immune response ,Respiratory system ,lcsh:QH301-705.5 ,Molecular Biology ,PM2.5 exposure ,030304 developmental biology ,0303 health sciences ,Lung ,business.industry ,medicine.disease ,Computational Mathematics ,mRNA m5C ,medicine.anatomical_structure ,lcsh:Biology (General) ,Cancer research ,medicine.symptom ,business ,030217 neurology & neurosurgery - Abstract
Exposure of airborne particulate matter (PM) with an aerodynamic diameter less than 2.5 μm (PM2.5) is epidemiologically associated with lung dysfunction and respiratory symptoms, including pulmonary fibrosis. However, whether epigenetic mechanisms are involved in PM2.5-induced pulmonary fibrosis is currently poorly understood. Herein, using a PM2.5-induced pulmonary fibrosis mouse model, we found that PM2.5 exposure leads to aberrant mRNA 5-methylcytosine (m5C) gain and loss in fibrotic lung tissues. Moreover, we showed the m5C-mediated regulatory map of gene functions in pulmonary fibrosis after PM2.5 exposure. Several genes act as m5C gain-upregulated factors, probably critical for the development of PM2.5-induced fibrosis in mouse lungs. These genes, including Lcn2, Mmp9, Chi3l1, Adipoq, Atp5j2, Atp5l, Atpif1, Ndufb6, Fgr, Slc11a1, and Tyrobp, are highly related to oxidative stress response, inflammatory responses, and immune system processes. Our study illustrates the first epitranscriptomic RNA m5C profile in PM2.5-induced pulmonary fibrosis and will be valuable in identifying biomarkers for PM2.5 exposure-related lung pathogenesis with translational potential.
- Published
- 2020
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