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Lower alkanes are feedstocks readily available but relatively inert. The con- version of low cost alkanes to industrially relevant alkenes is usually carried out on metal-based heterogeneous catalysts. Considering both the cost and the potential harmfulness of the metal involved in the dehydrogenation cat- alysts (typically, platinum or chromium), the study of metal-free processes represents an important challenge for the industrial chemistry in order to address more sustainable protocols and different routes either to activate or transform alkanes. Framed in this context, it was investigated, using a den- sity functional theory approach, the potential dehydrogenation activity of de- fective and partially hydrogenated boron nitride quasi-molecular nanoflakes, on ethane, chloroethane and phenylethane. Concerted and not concerted reactions were considered, resulting the former always favored with respect to the latter and being the mechanisms and the corresponding energy char- acterizing the different substrates, in any case, quite similar. Along the dehydrogenation, given a certain hydrocarbon adsorption constellation, the defective nitrogen sites were generally more active than the boron ones, being the energy barriers, in any case, smaller or at least comparable with those al- ready observed for the metal catalyzed dehydrogenation processes. After the dehydrogenation processes, the hydrogenated boron nitride quasi-molecular nanoflakes resulted highly stabilized, suggesting that specific strategies are needed to employ these materials as catalysts.

The reactivity pattern of the MnO2 catalyst in the selective aerobic oxidation of benzyl alcohol is assessed by density functional theory (DFT) analysis of adsorption energies and activation barriers on a model Mn4O8 cluster. DFT calculations predict high reactivity of defective Mn(IV) sites ruling a surface redox mechanism, L-H type, involving gas-phase oxygen. Bare and promoted (i.e., CeOx and FeOx) MnOx materials with high surface exposure of Mn(IV) sites were synthesized to assess kinetic and mechanistic issues of the selective aerobic oxidation of benzyl alcohol on real catalysts (T, 333–363 K). According to DFT predictions, the experimental study shows: i) comparable activity of bare and promoted catalysts due to surface Mn(IV) sites; ii) the catalytic role of oxygen-atoms in the neighboring of active Mn(IV) sites; and iii) a 0th-order dependence on alcohol concentration, diagnostic of remarkable influence of adsorption phenomena on the reactivity pattern. Evidences of catalyst deactivation due to the over-oxidation of benzyl alcohol to benzoic acid, acting as poison of the active sites, are discussed.

Data here reported are connected with the research article “Benzyl Alcohol to Benzaldehyde Oxidation on MnO x Clusters: Unraveling Atomistic Features” Gueci et al. [1] . This work described and discussed structural and energetic results, calculated by Density Functional Theory (DFT). In order to get kinetic information, DFT results were refined by an original approach, which will be shortly described in the following article. The crossed analysis of experimental and computational energetic and kinetic data allowed to (i) reconstruct the complicated lattice that connects the primary and secondary mechanisms of the reaction and (ii) identify alternative process pathways capable of by-passing parasitic mechanisms, decreasing selectivity. On the other hand, the data here presented show what is the basic information necessary to obtain the modeling of a complex process of heterogeneous catalysis. Moreover, they can be used either to verify the validity of the discussion outlined in the original article Gueci et al. [1] or as a starting point to computationally explore alternative routes and the related kinetics of the same oxidation processes, in the aim to further optimize the corresponding experimental approach.

The catalytic oxidation of benzyl alcohol with O 2 is a promising option for the production of benzaldehyde, from both environmental and economical viewpoints. In particular, highly dispersed MnO x systems feature good activity and selectivity in a wide range of temperatures, although deactivation phenomena by over-oxidation and/or poisoning of active sites are generally recorded. On this account, a density functional theory study was performed on cluster-sized catalyst models, namely Mn 4 O 8 and over-oxygenated Mn 4 O 9 fragments, to predict the reactivity pattern of MnO x catalysts in the selective aerobic oxidation of benzyl alcohol. Several pathways concur to determine the whole reaction process and all of them were compared to unveil the atomistic details of the alcohol oxidation mechanism. Moreover, assuming that the consecutive formation of benzoic acid affects the activity-stability pattern of the MnO x based catalyst, also the benzaldehyde oxidation mechanism was computationally addressed. A systematic comparison of the benzyl alcohol and benzaldehyde oxidation mechanisms on the Mn 4 O 8 and Mn 4 O 9 fragments reveals some experimental strategies to test the reaction mechanisms and design alternative catalytic routes to decrease undesired parasitic reactions leading to catalyst deactivation. The matching structural, energetic and kinetic data are published in the Data in Brief journal [1].

Decomposition pathways of 1,2-propanediol (1,2-PDO) on platinum were investigated by means of experiments and quantum-mechanical calculations. Different reaction paths on a Pt(111) model surface were computationally screened. Gas and liquid phase products distribution for aqueous phase reforming of 1,2-PDO solutions was experimentally analyzed. A mechanistic approach was used to trace the preferred paths according to calculated activation barriers of the elementary steps; in this way, the presence or absence of some hypothesized intermediates in the experiments was computationally rationalized. Hydroxyacetone was demonstrated to be among the most favored decomposition products. The competition between C-H, O-H, and C-C bond cleavages was investigated, revealing that shortening of the carbon chain occurs most likely via decarbonylation steps. (Figure Presented).

Boron nitride nanotube (BNNT) as an innovative support for carbohydrate transformation processes was evaluated, using density functional theory. The α-d-glucopyranose adsorption on a Pd30 cluster, supported on BNNT, was used to check both the local activity of topologically different metallic sites and the effects of the proximity of the BNNT surface to the same metallic sites. Detailed geometrical and electronic analyses performed on Pd30/BNNT and α-d-glucopyranose/Pd30/BNNT systems were discussed. It was observed that the deposition of the Pd30 cluster onto the BNNT support gives rise to an electronic rearrangement, determining a charge transfer from the support to the adsorbed metal cluster. The charge transfer, as shown by the analysis of molecular electrostatic potential, seems to generate electron-rich and electron-poor zones in the Pd30 cluster. The α-d-glucopyranose species, regardless the interaction geometry experienced, acts as an electron donor and preferentially adsorbs close to the electron-poor metal/support interface.

The ethylene glycol, CH2OH-CH2OH, decomposition mechanism, occurring on a subnanometric palladium cluster shaped by 12 atoms, was investigated by means of density functional theory. Different reaction routes were identified leading to H2 and CO. The whole reaction network was analyzed, framing the results within the graph theory. The possible decomposition pathways were discussed and compared, allowing one to draw a whole picture of all the parallel, possibly competitive, routes that starting from CH2OH-CH2OH originate H2 and CO.

Density functional theory calculations were employed to investigate the nucleation and growth of small palladium clusters, up to Pd9, into a microcavity of the porous hyper-cross-linked polystyrene (HPS). The geometries and the electronic structures of the palladium clusters inside the HPS cavity, following the one-by-one atom addition, are affected by a counterbalance between the Pd–phenyl (Pd−Φ) and Pd–Pd interactions. The analysis performed on energetics, cavity distortions, and cluster geometries indeed suggest that the cluster growth is dominated by the Pd−Φ interactions up to the formation of Pd4 aggregates, whereas the metal–metal interactions actually rule the growth of the larger clusters. The elasticity of the hyper-cross-linked polystyrene matrix also plays an important role in the cluster development processes.

A QM/MM investigation is reported dealing with the nucleation and growth of small palladium clusters, up to Pd8, on the outer surface of a suitable model of boron nitride nanotubes (BNNTs). It is shown that BNNTs could have a template effect on the cluster growth, which is due to the interplay between Pd–N and Pd–Pd interactions as well as due to the matching of the B3N3 ring and the Pd(111) face arrangement. The values for the cluster adsorption energies reveal a relatively strong physisorption, which suggests that under particular conditions the BNNTs could be used as supports for the preparation of shape-controlled metal clusters.

Biomass-based feedstocks are often oxygenated compounds characterized by large amounts of hydroxyls. As an example, polyols and sugar alcohols are largely employed as reactants for different chemical catalytic transformations such as oxidation, dehydration, and hydrodeoxigenation, which usually occur in aqueous medium. With the goal of gaining new insights into processes that could be industrially relevant, the adsorption of the OH groups on metal surfaces and in the presence of water has to be correctly reproduced and described, within a chosen theoretical framework. Toward this goal, several tests were performed on the catalytically relevant metal Ru, Pd, and Re, benchmarking their bulk and surfaces properties in the frame of the DFT paradigm and employing numerical atomic orbitals, joined with different exchange-correlation vdW-DF functionals. In particular, methanol, ethylene glycol, glycerol, and erythritol adsorption processes on Ru (0001), Pd (111), and Re (0001) surfaces were investigated, as well as their coadsorption with water.

The catalytic dehydration of propan-2-ol over H-Y and H-ZMS-5 aluminated zeolite models, mimicking both internal cavities and external surfaces, was studied by DFT calculations to investigate the reaction mechanism. After the adsorption of propan-2-ol on the zeolite, the dehydration mechanism starts with alcohol protonation, occurring by one acidic –OH group of the zeolite fragment, followed by a concerted β-elimination to give propene. The catalytic activity is affected by the size of the zeolite cavity, which is larger in the H-Y than in the H-ZMS-5 zeolite. The adsorption energy of the reagent, as an example, decreases in the order: H-Y cavity ≃ H-ZMS-5 surface > H-ZMS-5 cavity, pointing that the adsorption process should preferentially occur either on open surface or inside larger cavity. More interestingly, confinement effects play a twofold role in driving the reaction pathway, resulting in two different effects on the reaction outcomes. The thermodynamic stability, evaluated by the standard free energy difference of the products (water and propene) with respect to the reactant (propan-2-ol), would indeed suggest that the reaction more smoothly could occur for the systems: H-ZMS-5 surface > non-catalyzed > H-Y cavity > H-ZMS-5 cavity. The activation standard free energy of the process conversely decreases in the order: non-catalyzed > H-ZMS-5 surface > H-ZMS-5 cavity > H-Y cavity, suggesting that the reaction is faster inside zeolite cavities. Experimental and computational results are in agreement, giving confidence on the atomistic-level insights provided.

Density functional theory calculations were performed on uranyl complexed with nitrate and monoamide ligands (L) [UO(2)(NO(3))(2)·2L]. The obtained results show that the complex stability is mainly governed by two factors: (i) the maximization of the polarizability of the coordinating ligand and (ii) the minimization of the steric hindrance effects. Furthermore, the electrostatic interaction between ligands and uranium(vi) was found to be a crucial parameter for the complex stability. These results pave the way to the definition of (quantitative) property/structure relationships for the in silico screening of monoamide ligands with improved extraction efficiency of uranium(vi) in nitrate acidic solution.

Infrared spectra of 0.5 mol·L-1 uranium(VI) nitrate monoamide complexes in toluene have been recorded and compared with infrared spectra calculated by DFT. The investigated monoamides were N,N- dimethylformamide (DMF), N,N-dibutylformamide (DBF), and N,N- dicyclohexylformamide (DcHF). The validity of DFT calculations for describing uranium nitrate monoamide complexes has been confirmed as a fair agreement between experimental and calculated spectra was obtained. Furthermore, a topological analysis of the electron density has been carried out to characterize monoamide-uranium interactions. From this work, it appears that the increase of stability of uranylmonoamide complexes may be directly linked to the degree of polarization of the ligands in interaction with uranylnitrate. Among the investigated monoamides, the most stable complex is UO 2(NO3)2·2DcHF. This complex is characterized by a high positive charge delocalization in the outer part of the ligand molecule, which leads to a more concentrated positive charge close to the uranyl cation (UO22+), thus strengthening the electrostatic interaction between the metal and the ligand. © 2010 American Chemical Society.

We present simulation of the UV–visible spectra of acridine orange, a widely used photosensitizer for in vivo studies due to its highly environment-dependent spectroscopic properties. This dye has been investigated both in its protonated and neutral forms, either isolated or embedded in a pumpkin-shaped macromolecular cycle (cucurbit-7-uril), using time-dependent density functional theory techniques. To model this macromolecular cycle, two strategies are taken into account, allowing decoupling of the geometric and electrostatic influences of the host on the guest molecules. Experimental data are well-reproduced when using an embedding electrostatic technique, suggesting that such a method holds great promise to investigate the environmental effects on dye absorption spectra at low computational cost.

The interaction of CO and O 2 with neutral and positively charged Au 9 and Au 13 clusters was studied using Density Functional Theory. The aim was the understanding of the elementary steps of the low temperature activity of supported gold nanoparticles towards carbon monoxide combustion, that is, the oxidation of CO to CO 2 in presence of dioxygen molecules. The adsorption of a single CO molecule gives rise to a substantial electronic rearrangement on both neutral and cationic gold clusters. On the contrary, the adsorption of dioxygen produces an electron transfer from neutral gold clusters to the O 2 , while the interaction with cationic Au nanoparticles is simply electrostatic. Co-adsorption of CO and O 2 on adjacent catalytic sites produces a synergic electronic rearrangement on neutral cluster, but carbon monoxide oxidation does not take place. It is only when the two reactants are forced to interact with the same Au catalytic site that a chemical reaction takes place, leading to the rupture of the O 2 molecule on cationic Au 13 . On a neutral Au 13 cluster, on the other hand, the formation of an adduct containing a weakly bound dioxygen and a not fully formed carbon dioxide molecule is observed. The adsorption of a second CO molecule gives rise on both neutral and cationic aggregates to the facile desorption of CO 2 . Detailed reaction paths and energy barriers are calculated for each CO oxidation process.

With the aim of understanding the elementary steps governing the oxidation of CO catalyzed by dispersed or supported gold nanoclusters, the adsorption of molecular species, such as O2 and CO, on model neutral and positively charged clusters (Au(n)(m+) n = 1, 9, and 13; m = 0, 1, and 3) has been studied using an ab initio approach. The computed structural and thermodynamic data related to the binding process show that molecular oxygen interacts better with neutral clusters, acting as an electron acceptor, while CO more strongly binds to positively charged species, thus acting as an electron donor.

The structural evolution of two Pt/ceria–zirconia catalysts, characterized by different amounts of supported Pt, was monitored by in situ X-ray diffraction during the anaerobic oxidation of CO at different temperatures. In a first phase, oxygen coming from the surface layers of the ceria–zirconia mixed oxide is consumed and no structural variation of the support is observed. After this induction time, bulk reduction of Pt/ceria–zirconia takes place as a step-like process, while the CO2 production continues at a nearly constant rate. This behavior is totally different from that of the metal-free support in similar reaction conditions, that show a gradual bulk reduction. In repeated oxidation–reduction cycles, it was observed that the induction time in Pt/ceria–zirconia is a function of the thermal history, of the amount of supported Pt and of the structural evolution of the samples. r 2003 Elsevier Inc. All rights reserved.

This interdisciplinary work combines the use of shape- and size-defined Pd nanocrystals (cubes of 10 and 18 nm, and octahedra of 37 nm) with in situ techniques and DFT calculations to unravel the dynamic phenomena with respect to Pd reconstruction taking place during acetylene hydrogenation. Notably, it was found that the reacting Pd surface evolved at a different pace depending on the shape of the Pd nanocrystals, due to their specific propensity to form carbides under reaction conditions. Indeed, Pd cubes (Pd(100)) reacted with acetylene to form a PdC0.13 phase at a rate roughly 6-fold higher than that of octahedra (Pd(111)), resulting in nanocrystals with different degrees of carburization. DFT calculations revealed changes in the electronic and geometric properties of the Pd nanocrystals imposed by the progressive addition of carbon in its lattice.