1. Utility of blood as the clinical specimen for the diagnosis of ocular toxoplasmosis using uracil DNA glycosylase-supplemented loop-mediated isothermal amplification and real-time polymerase chain reaction assays based on REP-529 sequence and B1 gene
- Author
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Bahman, Rahimi Esboei, Shirzad, Fallahi, Mohammad, Zarei, Bahram, Kazemi, Mehdi, Mohebali, Saeedeh, Shojaee, Parisa, Mousavi, Aref, Teimouri, Raziyeh, Mahmoudzadeh, Mirataollah, Salabati, and Hossein, Keshavarz Valian
- Subjects
Adolescent ,Research ,Toxoplasma gondii ,Peripheral blood ,Infectious and parasitic diseases ,RC109-216 ,DNA, Protozoan ,Real-Time Polymerase Chain Reaction ,Sensitivity and Specificity ,eye diseases ,Infectious Diseases ,Molecular Diagnostic Techniques ,Chorioretinitis ,UDG-LAMP ,Humans ,Toxoplasmosis, Ocular ,Uracil-DNA Glycosidase ,Nucleic Acid Amplification Techniques ,Toxoplasma ,Real-time PCR - Abstract
BackgroundOcular infection withToxoplasma gondiiis a major preventable cause of blindness, especially in young people. The aim of the present study was to assess detection rate ofT. gondiiDNA in blood samples of clinically diagnosed of ocular toxoplasmosis using uracil DNA glycosylase-supplemented loop-mediated isothermal amplification (UDG-LAMP) and real-time quantitative PCR (qPCR) based on REP-529 and B1.MethodsOne hundred and seventeen patients with clinically diagnosed ocular toxoplasmosis (OT) were participated in the study as well as 200 control patients. Peripheral blood samples were assessed using UDG-LAMP and qPCR techniques targeting REP-529 and B1.ResultsDetection limits of qPCR using REP-529 and B1 were estimated as 0.1 and 1 fg ofT. gondiigenomic DNA, respectively. The limits of detection for UDG-LAMP using REP-529 and B1 were 1 and 100 fg, respectively. In this study, 18 and 16 patients were positive in qPCR using REP-529 and B1, respectively. Based on the results of UDG-LAMP, 15 and 14 patients were positive using REP-529 and B1, respectively. Results of the study on patients with active ocular lesion showed that sensitivity of REP-529 and BI targets included 64 and 63%, respectively using qPCR. Sensitivity of 62 and 61%, were concluded from UDG-LAMP using REP-529 and B1 in the blood cases of active ocular lesion. qPCR was more sensitive than UDG-LAMP for the detection ofToxoplasma gondiiDNA in peripheral blood samples of patients with clinically diagnosed toxoplasmic chorioretinitis. Furthermore, the REP-529 included a better detection rate for the diagnosis of ocular toxoplasmosis in blood samples, compared to that the B1 gene did. Moreover, the qPCR and UDG-LAMP specificity assessments have demonstrated no amplifications of DNAs extracted from other microorganisms based on REP-529 and B1.ConclusionsData from the current study suggest that qPCR and UDG-LAMP based on the REP-529 are promising diagnostic methods for the diagnosis of ocular toxoplasmosis in blood samples of patients with active chorioretinal lesions.
- Published
- 2022