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We propose here a new interpretation of recent quasi-elastic neutron scattering (QENS) measurements on water. A line-shape analysis based on a stretched exponential ansatz for the time decay of density fluctuations enabled us to observe an anomalous dependence on the exchanged momentum of relevant relaxation parameters. We discuss this effect and relate it to an a priori uncorrelated anomaly, previously evidenced by diffraction measurements.

Through elastic neutron scattering measurements, we investigated the picosecond dynamics of DNA in the hydrated powder state or embedded in glycerol glassy matrix from 20 K to 300 K. We calculated the relaxational contribution of the mean square displacements (MSD) of DNA hydrogen atoms. We found the existence of a linear relationship between the inverse of the biomolecule relaxational MSD and the logarithm of the bulk viscosity of the surrounding environment. From the comparison with the case of lysozyme in the same environments, for which the validity of the relationship was already verified, possible differences and analogies concerning the biomolecule-to-solvent dynamical coupling can be stressed. (C) 2007 Elsevier B.V. All rights reserved.

We performed a neutron scattering study to investigate the dynamical behavior of water absorbed in Nafion at low hydration level as a function of temperature in the range 200-300 K. To single out the spectral contribution of the confined water, the measurements were done on samples hydrated with both H(2)O and D(2)O. Due to the strong incoherent scattering cross section of hydrogen atoms with respect to deuterium, in the difference spectra, the contribution from the Nafion membrane is subtracted out and the signal originates essentially from protons in the liquid phase. The main quantities we extracted as a function of the momentum transfer are the elastic incoherent structure factor (EISF) and the line width of the quasielastic component. Their trend suggests that the motion of hydrogen atoms can be schematized as a random jumping inside a confining region, which can be related to the boundaries of the space where water molecules move in the cluster they form around the sulfonic acid site. Through the calculated EISF, we obtained information on the size of such a region, which increases up to 260 K and then attains a constant value. Above this temperature, the number of water protons that are dynamically activated in the accessible time window increases with a faster rate. The jump diffusion dynamics is characterized by a typical jumping time which is stable at 5.3 ps up to approximately 260 K and then gradually decreases. The ensemble of the findings indicates that, within the limits of the energy resolution of the present experiment, water absorbed in the Nafion membrane undergoes a dynamical transition at around 260 K. We discuss the possible relationship of this dynamical onset with the behavior of the electrical conductivity of the membrane as a function of the temperature.

The extent and nature of thermal fluctuations in the innovative class of cross-linked polymers called cyclodextrin nanosponges (CDNS) are investigated, on the picosecond time scale, through elastic and quasielastic neutron scattering experiments. Nanosponges are complex 3D polymer networks where covalent bonds connecting different cyclodextrin (CD) units and intra- and inter-molecular hydrogen-bond interactions cooperate to define the molecular architecture and fast dynamics of the polymer. The study presented here aims to clarify the nature of the conformational rearrangements activated by increasing temperature in the nanosponge polymer, and the constraints imposed by intra- and inter-molecular hydrogen-bond patterns on the internal dynamics of the macromolecule. The results suggest a picture, in which conformational rearrangements involving the torsion of the OH groups around the C–O bonds dominate the internal dynamics of the polymer over the picosecond time scale. Moreover, the estimated values of mean square displacements reveal that the motions of the hydrogen atoms in the nanosponges are progressively hampered as the cross-linking degree of the polymer is increased. Finally, the study of the molecular relaxations suggests a dynamical rearrangement of the hydrogen-bond networks, which is characterized by a jump diffusion motion of the more mobile hydrogen atoms belonging to the OH groups of the CD units. All these findings add further contribution to the rational comprehensive view of the dynamics of these macromolecules, which may be particularly beneficial in designing new drug-delivery systems with tuneable inclusion/release properties.

Currently, there is no comprehensive model for the dynamics of cellular membranes. The understanding of even the basic dynamic processes, such as lateral diffusion of lipids, is still quite limited. Recent studies of one-component membrane systems have shown that instead of single-particle motions, the lateral diffusion is driven by a more complex, concerted mechanism for lipid diffusion (E. Falck et al., J. Am. Chem. Soc., 2008, 130, 44–45), where a lipid and its neighbors move in unison in terms of loosely defined clusters. In this work, we extend the previous study by considering the concerted lipid diffusion phenomena in many-component raft-like membranes. This nature of diffusion phenomena emerge in all the cases we have considered, including both atom-scale simulations of lateral diffusion within rafts and coarse-grained MARTINI simulations of diffusion in membranes characterized by coexistence of raft and non-raft domains. The data allows us to identify characteristic time scales for the concerted lipid motions, which turn out to range from hundreds of nanoseconds to several microseconds. Further, we characterize typical length scales associated with the correlated lipid diffusion patterns and find them to be about 10 nm, or even larger if weak correlations are taken into account. Finally, the concerted nature of lipid motions is also found in dissipative particle dynamics simulations of lipid membranes, clarifying the role of hydrodynamics (local momentum conservation) in membrane diffusion phenomena.

International audience; Different experimental techniques, such as kinetic studies of ligand binding and fluorescence correlation spectroscopy, have revealed that the diffusive, internal dynamics of proteins exhibits autosimilarity on the time scale from microseconds to hours. Computer simulations have demonstrated that this type of dynamics is already established on the much shorter nanosecond time scale, which is also covered by quasielastic neutron scattering experiments. The autorsimilarity of protein dynamics is reflected in long-time memory effects in the underlying diffusion processes, which lead to a non-exponential decay of the observed time correlation functions. Fractional Brownian dynamics is an empirical model which is able to capture the essential aspects of internal protein dynamics. Here we give a brief introduction into the theory and show how the model can be used to interpret neutron scattering experiments and molecular dynamics simulation of proteins in solution under hydrostatic pressure.

In this work we study the effect of hydration on the dynamics of a protein in confined geometry, i.e. encapsulated in a porous silica matrix. Using elastic neutron scattering we investigate the temperature dependence of the mean square displacements of non-exchangeable hydrogen atoms of sol-gel encapsulated met-myoglobin. The study is extended to samples at 0.2, 0.3 and 0.5 g water/g protein fractions and comparison is made with met-myoglobin powders at the same average hydration and with a dry powder sample. Elastic data are analysed using a model of dynamical heterogeneity to take into account deviations of elastic intensity from gaussian behaviour in a large momentum transfer range and reveal a specific, model independent, effect of sol-gel confinement on protein dynamics, consisting mainly in a reduction of large-scale motions that are activated at temperatures larger than approximately 230 K. Surprisingly, the effect of confinement depends markedly on hydration and has a maximum at about 35% water/protein fraction corresponding to full first shell hydration. The presence of hydration-dependent MSD also in encapsulated met-Mb strongly supports the idea that the effect of sol-gel confinement on protein dynamics involves a modification of the structural/dynamical properties of the co-encapsulated solvent more than direct protein-matrix interactions.

We report here a quasi-elastic neutron scattering (QENS) investigation of the effect of pressure on the diffusivity properties of water in a dilute aqueous solution of hydrophobic molecules (tert-butyl alcohol, TBA). The experiment was performed at fixed TBA concentration (0.02 molar fraction) by varying pressure from 1 to 2000 bar at two different temperatures ( 268 and 278 K). The quasi-elastic line-shapes have been analysed in terms of a model based on the memory function formalism. Our data indicate that, on increasing pressure up to 2000 bar, the diffusion coefficient of water in the TBA/water mixture exhibits a relative increase larger than that of pure water under the same thermodynamic conditions. The extent of this effect increases with decreasing temperature. The observed behaviour is described in terms of pressure-induced distortions of the H-bonded random network of liquid water.

A quasielastic neutron scattering investigation, to study the single particle dynamics of water absorbed in a Nafion/zirconium phosphate composite membrane hydrated at a saturation value, is herewith presented. The measurements were done on samples hydrated with both H2O and D2O to properly select the spectral contribution of the confined water. Both the elastic incoherent structure factor (EISF) and the linewidth of the quasielastic component are evaluated as a function of the momentum transfer. Their trend suggests that the motion of the system hydrogen atoms can be schematized as a random jumping inside a confining spherical region, which can be related to the boundaries of the cluster that water molecules form around the sulfonic and phosphate acid sites. The size of such a region, the characteristic time necessary to explore the region and the number of mobile protons involved in this motion are similar to those estimated for water absorbed in a simple Nafion membrane at a saturation water content. Also the calculated jump diffusion coefficient resembles that of water confined in a simple Nafion membrane, and both are consistent with the value of bulk water. The results indicate that the dynamical behaviour of water in Nafion membranes is nearly unaffected by the presence of zirconium phosphate nanoparticles.