151. Conformational analysis of the endogenous μ-opioid agonist endomorphin-1 using NMR spectroscopy and molecular modeling
- Author
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M. Germana Paterlini, Allen B. Reitz, David A. Demeter, Gregory C. Leo, David M. Ferguson, Brown Frank K, and Brent L. Podlogar
- Subjects
Models, Molecular ,Agonist ,Magnetic Resonance Spectroscopy ,Molecular model ,Protein Conformation ,Stereochemistry ,medicine.drug_class ,Population ,Receptors, Opioid, mu ,Biophysics ,Multidimensional nuclear magnetic resonance spectroscopy ,Opioid ,Molecular dynamics ,Biochemistry ,chemistry.chemical_compound ,Structural Biology ,Genetics ,medicine ,Structure–activity relationship ,Computer Simulation ,Opioid peptide ,education ,Molecular Biology ,education.field_of_study ,Temperature ,Endomorphin-1 ,Cell Biology ,Nuclear magnetic resonance spectroscopy ,Peptide structure ,Structure-activity relationship ,Conformational analysis ,chemistry ,Receptors, Opioid ,Oligopeptides - Abstract
Endomorphin-1 (Tyr-Pro-Trp-Phe-NH2) is a highly selective and potent agonist of the mu-opioid receptor. To identify structural attributes unique to this opioid peptide and potential sites of recognition, a conformational analysis has been performed using multidimensional NMR and molecular modeling techniques. The spectroscopic results, derived from experiments in both DMSO and water, indicate that endomorphin-1 exists in the cis- and trans-configuration with respect to the Pro-omega bond in approximately 25% and 75% populations, respectively. In DMSO, the cis-configuration adopts a compact sandwich conformation in which the Tyr and Trp aromatic rings pack against the proline ring, whereas the trans-configuration adopts an extended conformation. Although non-random structure was not observed in water, condensed phase molecular dynamics calculations indicate that trans-isomers dominate the population in this higher dielectric medium. Structural comparison of the cis- and trans-configurations with morphine and selective mu-peptide ligands PL-017 and D-TIPP, as well as the delta-selective peptide ligands TIPP (delta-antagonist, mu-agonist) and DPDPE were also performed and suggest the trans-isomer is likely the bioactive form. A hypothesis is proposed to explain mu- and delta-selectivity based on the presence of spatially distinct selectivity pockets among these ligands.
- Published
- 1998
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