1. Detection on possible contaminant microbes on chlorophyceae cultures using TufA marker gene.
- Author
-
Kusumaningrum, Hermin Pancasakti, Anggini, Pragati Wira, Raihani, Salwa Annabila, Salsabila, Chiesa, Wahyuningsih, Candra, Dewi, Fiona Aqhila, Afifah, Anis, Sari, Amelia Febria, Setyowati, Sulis, and Zainuri, Muhammad
- Subjects
- *
MICROALGAE cultures & culture media , *GREEN algae , *NUCLEIC acid isolation methods , *DNA sequencing , *TUFAS , *DUNALIELLA - Abstract
Microalgae mass cultures are known to be prone of competitors or contaminants, mainly the group of microbes. It often occurred after hundred generations of subcultures. These microbes could possibly hinder the production of microalgae biomass, inhibiting further growth and mislead the research results. Therefore, this research focused on molecular detection of microalgae contaminants in the laboratory culture as the early prevention of culturing pure microalgae for further application. In this research, we use the modification of CTAB-based DNA extraction method, Polymerase Chain Reaction (PCR) using TufA marker gene, DNA sequences analysis based on MEGA X software and DNA alignment on National Center for Biotechnology Information (NCBI) database. Based on this research, two marine water bacteria comprise of Methylophaga spp. and Planctomycetes spp. were found in Dunaliella and Chlorella cultures respectively after 10th day of laboratory culture. These organisms have good survival in anoxic environment which could take over the culture under microalgae stress condition. Thus, these results could provide an information regarding the cohabitation of bacteria in microalgae cultures, specifically Chlorophyceae cultures. In addition, these bacteria also possibly give the bias result for the research interpretations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF