5,230 results on '"Chao Liang"'
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2. Study on the spatial relationship between road network and the diversity of urban public facilities: the case of the central area of Changsha City
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Yiwen Hu and Chao Liang
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The diversity of urban public facilities ,Road network ,Random Forest ,Nonlinear relationship ,Changsha City ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Abstract In the context of contemporary urbanization, the significance of diversifying urban public facilities has attracted significant attention. This study examines the relationship between road network and the diversity of urban public facilities in Changsha City. These factors are measured through the Shannon-Weiner Index and Space Syntax method. To provide greater specificity, the study employs Random Forest and Geographically Weighted Regression models to analyze the relationship between road networks and the diversity of urban public facilities. The results identify a nonlinear relationship between these variables. In addition, high accessibility exhibits a stronger association with diversity than accessibility alone, and this correlation is reflected in varying degrees of inconsistency across different study areas. Finally, the cartographic depiction of diversity clusters is overlaid on the road network, demonstrating a significant relationship between the configuration of the road network and diversity patterns. In conclusion, this research emphasizes the robust correlation between the roadway network and the diversity of urban public facilities. It prompts local governments to focus beyond mere equality, with a greater commitment to enhancing the quality of life for residents through diversity.
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- 2024
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3. Exercise interventions for the effect of endothelial function in hypertensive patients: A systematic review and meta‐analysis
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Chao Liang, Zhenpeng Song, XiaoZhi Yao, Qian Xiao, Hehui Fu, and Lixu Tang
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endothelial function ,exercise intervention ,hypertension ,meta analysis ,randomized controlled trial ,systematic review ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Endothelial dysfunction is crucial factor to the hypertension occurrence, and controversy remains regarding the effect of exercise on improving endothelial function in hypertensive patients. The authors used meta‐analysis to evaluate the intervention effect of exercise on endothelial function in hypertensive patients and to investigate exercise protocols that may have a greater intervention effect. A total of 37 studies and a total of 2801 participants were included. The results were as follows: endogenous nitric oxide (NO)[SMD = .89, 95% CI (.48, 1.30), p
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- 2024
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4. Association between the atherogenic index of plasma and left ventricular hypertrophy in patients with obstructive sleep apnea: a retrospective cross-sectional study
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Min Sun, Chao Liang, Hui Lin, Zhiyan Chen, Meng Wang, Shijie Fang, Tian Tian, Yujing Yang, Qunzhong Tang, Erming Zhang, and Qiang Tang
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Atherogenic index of plasma ,Left ventricular hypertrophy ,Obstructive sleep apnea ,Insulin resistance ,Nutritional diseases. Deficiency diseases ,RC620-627 - Abstract
Abstract Background The atherogenic index of plasma (AIP) is a simple and reliable marker of insulin resistance and is closely associated with various cardiovascular diseases (CVDs). However, the relationships between AIP and left ventricular (LV) geometric indicators have not been adequately assessed. This study was carried out to investigate the association between AIP and LV geometric abnormalities in obstructive sleep apnea (OSA) patients. Methods This retrospective cross-sectional study included a total of 618 OSA patients (57.3 ± 12.4 years, 73.1% males, BMI 28.1 ± 4.2 kg/m2) who underwent echocardiography. Patients with OSA were diagnosed with clinical symptoms and an apnea-hypopnea index ≥ 5.0. LV hypertrophy (LVH) was defined as left ventricular mass index (LVMIh2.7) ≥ 50.0 g/m2.7 for men and 47.0 g/m2.7 for women. AIP was calculated as log10 (TG/HDL-C). Results Compared with the non-LVH group, AIP was significantly higher in the LVH group (0.19 ± 0.29 vs 0.24 ± 0.28, P = 0.024) and the concentric LVH group (0.18 ± 0.29, 0.19 ± 0.30, 0.20 ± 0.26 and 0.29 ± 0.29 in the control, concentric remodeling, eccentric hypertrophy and concentric hypertrophy groups, respectively, P = 0.021). Meanwhile, in the group of patients with the highest AIP tertile, the levels of LVMIh2.7 (42.8 ± 10.5, 43.2 ± 9.3 and 46.1 ± 12.1 in the T1, T2 and T3 groups, respectively, P = 0.003), and the prevalence of LVH (25.2%, 24.0% and 34.6% in the T1, T2 and T3 groups, respectively, P = 0.032) and concentric LVH (10.7%, 9.8% and 20.2% in the T1, T2 and T3 groups, respectively, P = 0.053) were higher compared with those in the other groups. Positive correlations between AIP and LV geometric indicators including the LVMIh2.7, LVMIBSA, LV mass (LVM), diastolic left ventricular inner diameter (LVIDd), diastolic left ventricular posterior wall thickness (PWTd) and diastolic interventricular septal thickness (IVSTd), were revealed according to correlation analysis (P
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- 2024
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5. Gut microbial metabolite targets HDAC3-FOXK1-interferon axis in fibroblast-like synoviocytes to ameliorate rheumatoid arthritis
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Hongzhen Chen, Xuekun Fu, Xiaohao Wu, Junyi Zhao, Fang Qiu, Zhenghong Wang, Zhuqian Wang, Xinxin Chen, Duoli Xie, Jie Huang, Junyu Fan, Xu Yang, Yi Song, Jie Li, Dongyi He, Guozhi Xiao, Aiping Lu, and Chao Liang
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Biology (General) ,QH301-705.5 ,Physiology ,QP1-981 - Abstract
Abstract Rheumatoid arthritis (RA) is an autoimmune disease. Early studies hold an opinion that gut microbiota is environmentally acquired and associated with RA susceptibility. However, accumulating evidence demonstrates that genetics also shape the gut microbiota. It is known that some strains of inbred laboratory mice are highly susceptible to collagen-induced arthritis (CIA), while the others are resistant to CIA. Here, we show that transplantation of fecal microbiota of CIA-resistant C57BL/6J mice to CIA-susceptible DBA/1J mice confer CIA resistance in DBA/1J mice. C57BL/6J mice and healthy human individuals have enriched B. fragilis than DBA/1J mice and RA patients. Transplantation of B. fragilis prevents CIA in DBA/1J mice. We identify that B. fragilis mainly produces propionate and C57BL/6J mice and healthy human individuals have higher level of propionate. Fibroblast-like synoviocytes (FLSs) in RA are activated to undergo tumor-like transformation. Propionate disrupts HDAC3-FOXK1 interaction to increase acetylation of FOXK1, resulting in reduced FOXK1 stability, blocked interferon signaling and deactivation of RA-FLSs. We treat CIA mice with propionate and show that propionate attenuates CIA. Moreover, a combination of propionate with anti-TNF etanercept synergistically relieves CIA. These results suggest that B. fragilis or propionate could be an alternative or complementary approach to the current therapies.
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- 2024
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6. Biochar as a green solution to drive the soil carbon pump
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Yalan Chen, Lukas Van Zwieten, Keqing Xiao, Chao Liang, Jiaqi Ren, Anqi Zhang, Yang Li, Hailiang Dong, and Ke Sun
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Biochar ,Soil organic carbon ,Microbial carbon pump ,Mineral carbon pump ,Production of electric energy or power. Powerplants. Central stations ,TK1001-1841 ,Environmental sciences ,GE1-350 - Abstract
Abstract Biochar is a nature-based green solution to lift soil carbon storage and mitigate carbon release. Here, we propose a novel concept of biochar carbon pump (BCP) that bridges microbial carbon pump (MCP) and mineral carbon pump (MnCP), facilitating effective carbon sequestration. The BCP functions to promote carbon storage by introducing biochar-derived persistent C into soil, enhancing negative priming effects, altering soil microbial communities, and reinforcing organo-organic and organo-mineral interactions. Recognizing the value of BCP in bridging MCP and MnCP to facilitate diverse natural reactions for soil carbon sequestration is particularly significant in addressing climate change.
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- 2024
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7. The effect of metabolism-related lifestyle and clinical risk factors on digestive system cancers in East Asian populations: a two-sample Mendelian randomization analysis
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Xianlei Cai, Xueying Li, Chao Liang, Miaozun Zhang, Zhebin Dong, and Weiming Yu
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Digestive system cancers ,Risk factor ,Mendelian randomization ,Lifestyle ,Physical conditions ,Metabolic comorbidities ,Medicine ,Science - Abstract
Abstract Metabolic factors play a critical role in the development of digestive system cancers (DSCs), and East Asia has the highest incidence of malignant tumors in the digestive system. We performed a two-sample Mendelian randomization analysis to explore the associations between 19 metabolism-related lifestyle and clinical risk factors and DSCs, including esophageal, gastric, colorectal, hepatocellular, biliary tract, and pancreatic cancer. The causal association was explored for all combinations of each risk factor and each DSC. We gathered information on the instrumental variables (IVs) from various sources and retrieved outcome information from Biobank Japan (BBJ). The data were all from studies of east Asian populations. Finally, 17,572 DSCs cases and 195,745 controls were included. Our analysis found that genetically predicted alcohol drinking was a strong indicator of gastric cancer (odds ratio (OR) = 0.95; 95% confidence interval (CI): 0.93–0.98) and hepatocellular carcinoma (OR = 1.11; 95% CI: 1.05–1.18), whereas coffee consumption had a potential protective effect on hepatocellular carcinoma (OR = 0.69; 95% CI: 0.53–0.90). Triglyceride was potentially associated with a decreased risk of biliary tract cancer (OR = 0.53; 95% CI: 0.34–0.81), and uric acid was associated with pancreatic cancer risk (OR = 0.59; 95% CI: 0.37–0.96). Metabolic syndrome (MetS) was associated with esophageal and gastric cancer. Additionally, there was no evidence for a causal association between other risk factors, including body mass index, waist circumference, waist-to-hip ratio, educational levels, lipoprotein cholesterol, total cholesterol, glycine, creatinine, gout, and Graves’ disease, and DSCs. The leave-one-out analysis revealed that the single nucleotide polymorphism (SNP) rs671 from the ALDH2 gene has a disproportionately high contribution to the causal association between alcohol drinking and gastric cancer and hepatocellular carcinoma, as well as the association between coffee consumption and hepatocellular carcinoma. The present study revealed multiple metabolism-related lifestyle and clinical risk factors and a valuable SNP rs671 for DSCs, highlighting the significance of metabolic factors in both the prevention and treatment of DSCs.
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- 2024
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8. Exploration of vitamin D metabolic activity-related biological effects and corresponding therapeutic targets in prostate cancer
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Lei Ding, Yong Wang, Zhentao Tang, Chenbo Ni, Qian Zhang, Qidi Zhai, Chao Liang, and Jie Li
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Vitamin D ,Prostate cancer ,Prognostic model ,Apolipoprotein E ,Nutrition. Foods and food supply ,TX341-641 ,Nutritional diseases. Deficiency diseases ,RC620-627 - Abstract
Abstract Background Previous studies have unequivocally demonstrated that the vitamin D (VD) metabolism pathway significantly influences prognosis and sensitivity to hormone therapy in prostate cancer (PCa). However, the precise underlying mechanism remains unclear. Methods We performed molecular profiling of 1045 PCa patients, leveraging genes linked to VD synthesis and VD receptors. We then identified highly variable gene modules with substantial associations with patient stratification. Subsequently, we intersected these modules with differentially expressed genes between PCa and adjacent paracancerous tissues. Following a meticulous process involving single-factor regression and LASSO regression to eliminate extraneous variables and construct a prognostic model. Within the high-risk subgroup defined by the calculated risk score, we analyzed their differences in cell infiltration, immune status, mutation landscape, and drug sensitivity. Finally, we selected Apolipoprotein E (APOE), which featured prominently in this model for further experimental exploration to evaluate its potential as a therapeutic target. Results The prognostic model established in this study had commendable predictive efficacy. We observed diminished infiltration of various T-cell subtypes and reduced expression of co-stimulatory signals from antigen-presenting cells. Mutation analysis revealed that the high-risk cohort harbored a higher frequency of mutations in the TP53 and FOXA genes. Notably, drug sensitivity analysis suggested the heightened responsiveness of high-risk patients to molecular inhibitors targeting the Bcl-2 and MAPK pathways. Finally, our investigation also confirmed that APOE upregulates the proliferative and invasive capacity of PCa cells and concurrently enhances resistance to androgen receptor antagonist therapy. Conclusion This comprehensive study elucidated the potential mechanisms through which this metabolic pathway orchestrates the biological behavior of PCa and findings hold promise in advancing the development of combination therapies in PCa.
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- 2024
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9. Protocol for constructing tumor-targeting ANM-PROTACs for degradation of transcription factors
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Jin Li and Chao Liang
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Cancer ,Protein Biochemistry ,Proteomics ,Mass Spectrometry ,Science (General) ,Q1-390 - Abstract
Summary: AS1411-NCL-MDM2-based proteolysis-targeting chimeras (ANM-PROTACs) are capable of inducing selective degradation of transcription factors (TFs) in tumor cells. Here, we present a protocol for constructing ANM-PROTACs. We describe steps for molecular design of the ANM-PROTACs, assembly and characterization of the ANM-PROTACs, and initial assessment of in vitro TF degradation potency. We then detail procedures for validation of selective degradation of TFs via proteomic analysis. This protocol has been successfully applied to degrade various TFs across multiple tumor cell lines.For complete details on the use and execution of this protocol, please refer to Fu et al.1 : Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.
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- 2024
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10. Host-Gut Microbiota Metabolic Interactions and Their Role in Precision Diagnosis and Treatment of Gastrointestinal Cancers
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Chunhao Cao, Siran Yue, Aiping Lu, and Chao Liang
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gastrointestinal cancers ,gut microbiota ,metabolic interactions ,biomarkers ,microbiome therapeutics ,Therapeutics. Pharmacology ,RM1-950 - Abstract
The critical role of the gut microbiome in gastrointestinal cancers is becoming increasingly clear. Imbalances in the gut microbial community, referred to as dysbiosis, are linked to increased risks for various forms of gastrointestinal cancers. Pathogens like Fusobacterium and Helicobacter pylori relate to the onset of esophageal and gastric cancers, respectively, while microbes such as Porphyromonas gingivalis and Clostridium species have been associated with a higher risk of pancreatic cancer. In colorectal cancer, bacteria such as Fusobacterium nucleatum are known to stimulate the growth of tumor cells and trigger cancer-promoting pathways. On the other hand, beneficial microbes like Bifidobacteria offer a protective effect, potentially inhibiting the development of gastrointestinal cancers. The potential for therapeutic interventions that manipulate the gut microbiome is substantial, including strategies to engineer anti-tumor metabolites and employ microbiota-based treatments. Despite the progress in understanding the influence of the microbiome on gastrointestinal cancers, significant challenges remain in identifying and understanding the precise contributions of specific microbial species and their metabolic products. This knowledge is essential for leveraging the role of the gut microbiome in the development of precise diagnostics and targeted therapies for gastrointestinal cancers.
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- 2024
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11. Network pharmacology- and molecular docking-based investigation on the mechanism of action of Si-ni San in the treatment of depression combined with anxiety and experimental verification in adolescent rats
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Zhiping Li, Shimin Liang, Xulan Cui, Chongkun Shen, Zaibin Xu, Wei Chen, Mingan Wu, Chao Liang, Jinman Liu, Jiawen Huang, and Weirong Li
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network pharmacology ,molecular docking ,Si-ni San ,depression ,anxiety ,maternal separation ,Psychiatry ,RC435-571 - Abstract
BackgroundThe incidence rate of adolescent depression and anxiety has been increasing since the outbreak of COVID-19, which there are no effective therapeutic drugs available. Si-ni San is commonly used in traditional Chinese medicine for the treatment of depression-like as well as anxiety-like behavior, but its mechanism for treating depression combined with anxiety during adolescence is not yet clear.MethodsNetwork pharmacology was used to explore potential drug molecules and related targets, molecular docking and molecular dynamics (MD) simulation were used to evaluate the interaction between the potential drug molecules and related targets, and a model of anxiety combined with depression in adolescent rats as well as the following behavioral tests and molecular biology tests were used to verify the results from network pharmacology and molecular docking.ResultsAs a result, 256 active ingredients of Si-ni San and 1128 potential targets were screened out. Among them, quercetin, Luteolin, kaempferol, 7-Methoxy-2-methyl isoflavone, formononetin showed to be the most potential ingredients; while STAT3, IL6, TNF, AKT1, AKT1, TP53, IL1B, MAPK3, VEGFA, CASP3, MMP9 showed to be the most potential targets. AGE-RAGE signaling pathway in diabetic complications, IL-17 signaling pathway, HIF-1 signaling pathway, PI3K-Akt signaling pathway and TNF signaling pathway, which are involved in anti-inflammation processes, showed to be the most probable pathways regulated by Si-ni San. Molecular docking and MD simulation between the compounds to inflammation-associated targets revealed good binding abilities of quercetin, Luteolin, kaempferol, nobiletin and formononetin to PTGS2 and PPARγ. In the experiment with adolescent rats, Si-ni San markedly suppressed early maternal separation (MS) combined with adolescent chronic unpredictable mild stress (CUMS)-induced depression combined with anxiety. The qPCR results further indicated that Si-ni San regulated the oxidative stress and inflammatory response.ConclusionThis study demonstrates that adolescent anxiety- and depression-like behavior induced by MS combined CUMS can be ameliorated by Si-ni San by improved inflammation in hippocampus via targeting TNF pathway and Nrf2 pathway, helping to reveal the mechanism of Si-ni San in treating adolescent depression combined with anxiety.
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- 2024
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12. Effects of epidural anesthesia and analgesia on the incidence of chronic pain after thoracoscopic lung surgery: A retrospective cohort study
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Yiming Liu, Chenyu Wang, Zhixiang Ye, Ling Jiang, Changhong Miao, and Chao Liang
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Thoracic surgery ,Chronic postoperative pain ,Thoracic epidural anesthesia ,Video-assisted thoracoscopic surgery ,Patient-controlled intravenous analgesia ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Objective: Chronic postoperative pain (CPSP) is common after thoracic surgery, even after the less invasive video-assisted thoracoscopic surgery (VATS). This study investigated the effect of thoracic epidural anesthesia (TEA) on the development of CPSP. Materials: We retrospectively analyzed the data of patients who underwent VATS at our center between 2020 and 2022. The enrolled patients were divided into the epidural block (EPI) and patient-controlled intravenous analgesia (PCIA) groups. A telephone questionnaire was used to collect information regarding CPSP, which was defined as a numerical rating scale (VAS) score ≥1 at 3 or 6 months postoperatively. Additionally, statistical analyses were performed to identify the risk factors for CPSP in the two groups. Results: Overall, 894 patients completed the follow-up interviews at 3 and 6 months, with 325 and 569 patients in the PCIA and EPI groups, respectively. The incidence rates of CPSP in the PCIA group at 3 and 6 months were 16.9 % (95 % confidence interval [CI]: 9.3–32.7 %) and 13.5 % (95 % CI: 8.7–33.4 %), and 10.3 % (95 % CI: 8.1–30.5 %) and 3.6 % (95 % CI: 3.5–21.5 %) in EPI group, respectively. The incidence of CPSP at 3 months (P = 0.0048) and 6 months (P
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- 2024
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13. Critical signaling molecules in the temporomandibular joint osteoarthritis under different magnitudes of mechanical stimulation
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Yuqi Liu, Fangwen Jia, Kangya Li, Chao Liang, Xiao Lin, Wei Geng, and Yanxi Li
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temporomandibular joint ,mechanical stimulation ,condylar cartilage ,chondrocyte ,osteoarthritis ,Therapeutics. Pharmacology ,RM1-950 - Abstract
The mechanical stress environment in the temporomandibular joint (TMJ) is constantly changing due to daily mandibular movements. Therefore, TMJ tissues, such as condylar cartilage, the synovial membrane and discs, are influenced by different magnitudes of mechanical stimulation. Moderate mechanical stimulation is beneficial for maintaining homeostasis, whereas abnormal mechanical stimulation leads to degeneration and ultimately contributes to the development of temporomandibular joint osteoarthritis (TMJOA), which involves changes in critical signaling molecules. Under abnormal mechanical stimulation, compensatory molecules may prevent degenerative changes while decompensatory molecules aggravate. In this review, we summarize the critical signaling molecules that are stimulated by moderate or abnormal mechanical loading in TMJ tissues, mainly in condylar cartilage. Furthermore, we classify abnormal mechanical stimulation-induced molecules into compensatory or decompensatory molecules. Our aim is to understand the pathophysiological mechanism of TMJ dysfunction more deeply in the ever-changing mechanical environment, and then provide new ideas for discovering effective diagnostic and therapeutic targets in TMJOA.
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- 2024
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14. Decoding sunitinib resistance in ccRCC: Metabolic-reprogramming-induced ABAT and GABAergic system shifts
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Qian Zhang, Lei Ding, Ye Yan, Qidi Zhai, Zhisheng Guo, Yibo Li, Zhentao Tang, Pan Zang, Chenbo Ni, Shaobo Zhang, Jian Qian, Peng Han, Pu Li, Pengfei Shao, Chao Liang, and Jie Li
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biological sciences ,molecular biology ,cancer ,Science - Abstract
Summary: Sunitinib, a primary treatment for clear cell renal cell carcinoma (ccRCC), frequently encounters the challenge of resistance development. Metabolic reprogramming, a characteristic change in ccRCC, is likely linked to this resistance. Our research revealed a notable decrease in the expression of the key metabolic gene ABAT in ccRCC, which contributed to diminished sensitivity to sunitinib. Downregulation of ABAT led to an increase in the intracellular level of gamma-aminobutyric acid (GABA), triggering abnormal activation of the G-protein-coupled receptor GABA-B. This activation resulted in increased transactivation of the tyrosine kinase receptors SYK and LYN, thereby reducing the antitumor and antiangiogenic properties of sunitinib. However, the application of SYK and LYN inhibitors successfully inhibited this effect. The transactivation of SYK and LYN caused resistance to the antiangiogenic effects of sunitinib through the upregulation of PGF protein levels. Furthermore, the combined application of an LYN inhibitor with sunitinib has been shown to enhance therapeutic efficacy.
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- 2024
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15. Generalizable anchor aptamer strategy for loading nucleic acid therapeutics on exosomes
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Gang Han, Yao Zhang, Li Zhong, Biaobiao Wang, Shuai Qiu, Jun Song, Caorui Lin, Fangdi Zou, Jingqiao Wu, Huanan Yu, Chao Liang, Ke Wen, Yiqi Seow, and HaiFang Yin
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Exosome ,Nucleic Acid Therapeutics ,Anchor Aptamer ,Drug Delivery ,SELEX ,Medicine (General) ,R5-920 ,Genetics ,QH426-470 - Abstract
Abstract Clinical deployment of oligonucleotides requires delivery technologies that improve stability, target tissue accumulation and cellular internalization. Exosomes show potential as ideal delivery vehicles. However, an affordable generalizable system for efficient loading of oligonucleotides on exosomes remain lacking. Here, we identified an Exosomal Anchor DNA Aptamer (EAA) via SELEX against exosomes immobilized with our proprietary CP05 peptides. EAA shows high binding affinity to different exosomes and enables efficient loading of nucleic acid drugs on exosomes. Serum stability of thrombin inhibitor NU172 was prolonged by exosome-loading, resulting in increased blood flow after injury in vivo. Importantly, Duchenne Muscular Dystrophy PMO can be readily loaded on exosomes via EAA (EXOEAA-PMO). EXOEAA-PMO elicited significantly greater muscle cell uptake, tissue accumulation and dystrophin expression than PMO in vitro and in vivo. Systemic administration of EXOEAA-PMO elicited therapeutic levels of dystrophin restoration and functional improvements in mdx mice. Altogether, our study demonstrates that EAA enables efficient loading of different nucleic acid drugs on exosomes, thus providing an easy and generalizable strategy for loading nucleic acid therapeutics on exosomes.
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- 2024
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16. GPX8+ cancer-associated fibroblast, as a cancer-promoting factor in lung adenocarcinoma, is related to the immunosuppressive microenvironment
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Ying Bai, Tao Han, Yunjia Dong, Chao Liang, Lu Gao, Yafeng Liu, Jiawei Zhou, Jianqiang Guo, Deyong Ge, Jing Wu, and Dong Hu
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Lung adenocarcinoma ,GPX8 ,Cancer-associated fibroblasts ,Prognosis ,Immunosuppressive microenvironment ,Internal medicine ,RC31-1245 ,Genetics ,QH426-470 - Abstract
Abstract Background Cancer-associated fibroblasts (CAFs) play a crucial role in the tumor microenvironment of lung adenocarcinoma (LUAD) and are often associated with poorer clinical outcomes. This study aimed to screen for CAF-specific genes that could serve as promising therapeutic targets for LUAD. Methods We established a single-cell transcriptional profile of LUAD, focusing on genetic changes in fibroblasts. Next, we identified key genes associated with fibroblasts through weighted gene co-expression network analysis (WGCNA) and univariate Cox analysis. Then, we evaluated the relationship between glutathione peroxidase 8 (GPX8) and clinical features in multiple independent LUAD cohorts. Furthermore, we analyzed immune infiltration to shed light on the relationship between GPX8 immune microenvironment remodeling. For clinical treatment, we used the tumor immune dysfunction and exclusion (TIDE) algorithm to assess the immunotherapy prediction efficiency of GPX8. After that, we screened potential therapeutic drugs for LUAD by the connectivity map (cMAP). Finally, we conducted a cell trajectory analysis of GPX8+ CAFs to show their unique function. Results Fibroblasts were found to be enriched in tumor tissues. Then we identified GPX8 as a key gene associated with CAFs through comprehensive bioinformatics analysis. Further analysis across multiple LUAD cohorts demonstrated the relationship between GPX8 and poor prognosis. Additionally, we found that GPX8 played a role in inducing the formation of an immunosuppressive microenvironment. The TIDE method indicated that patients with low GPX8 expression were more likely to be responsive to immunotherapy. Using the cMAP, we identified beta-CCP as a potential drug-related to GPX8. Finally, cell trajectory analysis provided insights into the dynamic process of GPX8+ CAFs formation. Conclusions This study elucidates the association between GPX8+ CAFs and poor prognosis, as well as the induction of immunosuppressive formation in LUAD. These findings suggest that targeting GPX8+ CAFs could potentially serve as a therapeutic strategy for the treatment of LUAD.
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- 2024
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17. A creep model for ultra-deep salt rock considering thermal-mechanical damage under triaxial stress conditions
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Chao Liang, Jianfeng Liu, Jianxiong Yang, Huining Xu, Zhaowei Chen, and Lina Ran
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Creep experiments ,Creep model ,Thermal and mechanical damage ,Fractional derivative ,Engineering geology. Rock mechanics. Soil mechanics. Underground construction ,TA703-712 - Abstract
To investigate the specific creep behavior of ultra-deep buried salt during oil and gas exploitation, a set of triaxial creep experiments was conducted at elevated temperatures with constant axial pressure and unloading confining pressure conditions. Experimental results show that the salt sample deforms more significantly with the increase of applied temperature and deviatoric loading. The accelerated creep phase is not occurring until the applied temperature reaches 130 °C, and higher temperature is beneficial to the occurrence of accelerated creep. To describe the specific creep behavior, a novel three-dimensional (3D) creep constitutive model is developed that incorporates the thermal and mechanical variables into mechanical elements. Subsequently, the standard particle swarm optimization (SPSO) method is adopted to fit the experimental data, and the sensibility of key model parameters is analyzed to further illustrate the model function. As a result, the model can accurately predict the creep behavior of salt under the coupled thermo-mechanical effect in deep-buried condition. Based on the research results, the creep mechanical behavior of wellbore shrinkage is predicted in deep drilling projects crossing salt layer, which has practical implications for deep rock mechanics problems.
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- 2024
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18. Efficacy and safety of a smartphone application‐based treatment of ketogenic diet in pediatric refractory epilepsy
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Wei Li, Wei Gu, Chao Liang, Fulai Tu, Le Ding, Xiaopeng Lu, Hu Guo, Guo Zheng, and Chunfeng Wu
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efficacy ,ketogenic diet ,pediatric ,refractory epilepsy ,safety ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Objective We aimed to find predictors for smartphone application‐based ketogenic diet (KD) treatment effectiveness and safety. Methods The efficacy was evaluated according to the reduction in seizure frequency after the intervention of KD; safety was evaluated based on adverse effects. The ordinal logistic regression analysis was used to explore the influencing factors of efficacy. Results The study sample included 116 males and 65 females with a median age of 2.27 years. The baseline frequency of seizure was more than five times/day in 123 children, 50.83% of them received three or more antiepileptic drugs (AEDs). Seventy‐two patients' KD initiation mode was outpatient, and 73 completed the 12‐month follow‐up. A total of 88 (48.62%) patients had reported a reduction in seizure ≥50%. Compared with 12 months, those who had received KD therapy for only 3 (P = 0.009) and 6 months (P = 0.005) were more likely to show negative outcomes. Outpatient initiation had better outcomes (P = 0.029) than inpatient initiation. For the number of AEDs applied, patients on two AEDs were more likely to achieve better outcomes (P = 0.001). Adverse events had been noted among 77 patients; BMI Z‐score at KD initiation was associated with adverse effects (P = 0.003). Significance Our study suggested that outpatient initiation and long‐term treatment of KD should be encouraged. Plain Language Summary Our research shows that the KD is a helpful treatment for children with refractory epilepsy, reducing seizures by more than 50% in nearly half of the cases, with some experiencing complete seizure freedom. We used a smartphone app to improve communication between patients and their healthcare teams, resulting in a high retention, and app usage was linked to reduced adverse effects. We recommend early consideration of KD treatment for patients failing two AED, encourage outpatient initiation, and advocate for longer‐term KD use.
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- 2024
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19. Improving routing performance in social internet of things with FNRA: The free node-based approach
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Fang Xu, Yuanlin Lyu, Manzoor Ahmed, Zenggang Xiong, Min Deng, Weihu Wang, Umer Sadiq Khan, Songhao Jiang, and Chao Liang
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Social Internet of things ,Opportunity routing ,Community ,Free node ,Routing algorithm ,Communication network ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
In the distributed environment of the Social Internet of Things (SIoT), where nodes rely primarily on the “store-carry-forward” mechanism for message delivery, it has been determined that forming community structures is advantageous for message propagation. Nevertheless, due to the dynamic nature of nodal social relationships and inaccurate community division, routing algorithm performance is inferior. This paper proposes a novel SIoT routing algorithm, the Free Node-based Routing Algorithm (FNRA) to resolve these issues. The FNRA algorithm presents a comprehensive framework for message forwarding, differentiating between in-community and out-of-community scenarios. The algorithm compares the forwarding capabilities of relay and source nodes within the community. A graph-theoretic approach is used to classify source, relay, and destination nodes into four distinct structures outside the community. Considering node-node, node-community, community-node, and community-community interactions, the algorithm addresses situations where the source, destination, and relay nodes do not belong to the same community. FNRA dynamically selects appropriate forwarding strategies to expedite message delivery to the destination node by leveraging the community structure and the presence of free nodes. The FNRA algorithm exhibits superior performance through detailed experimental simulations by enhancing message delivery rate, decreasing network overhead, and reducing average latency compared to existing routing algorithms. This demonstrates the algorithm's effectiveness in optimizing overall network performance.
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- 2024
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20. YOLO-Based Missile Pose Estimation Under Uncalibrated Conditions
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Changhong Jiang, Xiaoqiao Mu, Bingbing Zhang, Mujun Xie, and Chao Liang
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Missile docking ,vision-based pose estimation ,YOLOv5s ,uncalibrated agorithm ,attention mechanism ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
In missile docking, high-precision section alignment is vital for mission success. Traditional techniques, relying on radar and GPS, face calibration complexities and environmental interference risks, potentially leading to inaccurate estimations. To address this issue, the PoseNoCal-YOLOv5 is developed, offering a vision-based pose estimation approach that requires no traditional calibration, enhancing docking precision and reliability. It comprises two sub-networks: an improved YOLOv5 object detection model with an attention mechanism for precise object detection, and an uncalibrated pose estimation module using re-linearization for pose estimation without camera calibration. A simulated dataset is created for validation, covering diverse docking scenarios. Extensive experiments on this simulated datasets prove the effectiveness of the proposed method.
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- 2024
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21. Nano-carrier DMSN for effective multi-antigen vaccination against SARS-CoV-2
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Peng Sun, Bingsheng Cheng, Jiaxi Ru, Xiaoyan Li, Guicun Fang, Yinli Xie, Guangjiang Shi, Jichao Hou, Longwei Zhao, Lipeng Gan, Lina Ma, Chao Liang, Yin Chen, and Zhiyong Li
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Antigen nanocarrier ,DMSN ,Nanoparticles ,Vaccine ,SARS-CoV-2 ,Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
Abstract The pandemic caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has had a profound impact on the global health and economy. While mass vaccination for herd immunity is effective, emerging SARS-CoV-2 variants can evade spike protein-based COVID-19 vaccines. In this study, we develop a new immunization strategy by utilizing a nanocarrier, dendritic mesoporous silica nanoparticle (DMSN), to deliver the receptor-binding domain (RBD) and conserved T-cell epitope peptides (DMSN-P-R), aiming to activate both humoral and cellular immune responses in the host. The synthesized DMSN had good uniformity and dispersion and showed a strong ability to load the RBD and peptide antigens, enhancing their uptake by antigen-presenting cells (APCs) and promoting antigen delivery to lymph nodes. The DMSN-P-R vaccine elicited potent humoral immunity, characterized by highly specific RBD antibodies. Neutralization tests demonstrated significant antibody-mediated neutralizing activity against live SARS-CoV-2. Crucially, the DMSN-P-R vaccine also induced robust T-cell responses that were specifically stimulated by the RBD and conserved T-cell epitope peptides of SARS-CoV-2. The DMSN demonstrated excellent biocompatibility and biosafety in vitro and in vivo, along with degradability. Our study introduces a promising vaccine strategy that utilizes nanocarriers to deliver a range of antigens, effectively enhancing both humoral and cellular immune responses to prevent virus transmission.
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- 2024
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22. hBcl2 overexpression in BMSCs enhances resistance to myelin debris-induced apoptosis and facilitates neuroprotection after spinal cord injury in rats
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Dasheng Tian, Xingyu You, Jianan Ye, Gan Chen, Hang Yu, Jianwei Lv, Fangli Shan, Chao Liang, Yihui Bi, Juehua Jing, and Meige Zheng
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Medicine ,Science - Abstract
Abstract After spinal cord injury (SCI), the accumulation of myelin debris at the lesion exacerbates cell death and hinders axonal regeneration. Transplanted bone marrow mesenchymal stem cells (BMSCs) have been proven to be beneficial for SCI repair, but they are susceptible to apoptosis. It remains unclear whether this apoptotic process is influenced by myelin debris. Here, we constructed rat BMSCs overexpressing human B-cell lymphoma 2 (hBcl2) alone (hBcl2 group), BMSCs overexpressing hBcl2 with an endoplasmic reticulum-anchored segment (hBcl2-cb) (cb group), and a negative control group (NC group) for transplantation in this study. Immunocytochemistry staining validated the successful expression of hBcl2 in BMSCs within the hBcl2 group and cb group. All BMSCs from each group exhibited the ability to phagocytize myelin debris. Nevertheless, only BMSCs derived from the hBcl2 group exhibited heightened resistance to apoptosis and maintained prolonged viability for up to 5 days when exposed to myelin debris. Notably, overexpression of hBcl2 protein, rather than its endoplasmic reticulum-anchored counterpart, significantly enhanced the resistance of BMSCs against myelin debris-induced apoptosis. This process appeared to be associated with the efficient degradation of myelin debris through the Lamp1+ lysosomal pathway in the hBcl2 group. In vivo, the hBcl2 group exhibited significantly higher numbers of surviving cells and fewer apoptotic BMSCs compared to the cb and NC groups following transplantation. Furthermore, the hBcl2 group displayed reduced GFAP+ glial scarring and greater preservation of NF200+ axons in the lesions of SCI rats. Our results suggest that myelin debris triggers apoptosis in transplanted BMSCs, potentially elucidating the low survival rate of these cells after SCI. Consequently, the survival rate of transplanted BMSCs is improved by hBcl2 overexpression, leading to enhanced preservation of axons within the injured spinal cord.
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- 2024
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23. Failure transition of shear-to-dilation band of rock salt under triaxial stresses
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Jianfeng Liu, Xiaosong Qiu, Jianxiong Yang, Chao Liang, Jingjing Dai, and Yu Bian
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Rock salt ,Cyclic mechanical loading ,Shear band ,Dilation band ,Underground gas storage (UGS) ,Engineering geology. Rock mechanics. Soil mechanics. Underground construction ,TA703-712 - Abstract
Great potential of underground gas/energy storage in salt caverns seems to be a promising solution to support renewable energy. In the underground storage method, the operating cycle unfortunately may reach up to daily or even hourly, which generates complicated pressures on the salt cavern. Furthermore, the mechanical behavior of rock salt may change and present distinct failure characteristics under different stress states, which affects the performance of salt cavern during the time period of full service. To reproduce a similar loading condition on the cavern surrounding rock mass, the cyclic triaxial loading/unloading tests are performed on the rock salt to explore the mechanical transition behavior and failure characteristics under different confinement. Experimental results show that the rock salt samples present a diffused shear failure band with significant bulges at certain locations in low confining pressure conditions (e.g. 5 MPa, 10 MPa and 15 MPa), which is closely related to crystal misorientation and grain boundary sliding. Under the elevated confinement (e.g. 20 MPa, 30 MPa and 40 MPa), the dilation band dominates the failure mechanism, where the large-size halite crystals are crushed to be smaller size and new pores are developing. The failure transition mechanism revealed in the paper provides additional insight into the mechanical performance of salt caverns influenced by complicated stress states.
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- 2024
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24. Association between sleep duration during pregnancy and gestational diabetes mellitus: a systematic review and meta-analysis
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Yuandong Li, Chao Liang, Cui Wu, and Zheng Nan
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gestational diabetes ,pregnancy ,sleep duration ,meta-analysis ,systematic review ,Medicine (General) ,R5-920 - Abstract
ObjectiveTo systematically review studies on the correlation between sleep duration during pregnancy and gestational diabetes mellitus (GDM) and use meta-analysis to explore the correlation between the two to provide a basis for preventing GDM during pregnancy.MethodsThe search databases were China Knowledge Network (CNKI), Weipu, Wanfang, China Biomedical Literature Service System (SinoMed), Cochrane Library, Web of Science, Embase, and PubMed, and the search time was from the establishment of the above databases to July 2023. The data were statistically analyzed using STATA/MP17 and RevMan 5.3 software. Publication bias could be accurately assessed using funnel plots and Egger’s test.ResultsA total of 5,197 papers were searched, and 13 studies were finally included, which included 80,259 individuals, including 3,461 patients with GDM. The comprehensive analysis showed that. Based on pooled data from prospective, cross-sectional, and case–control studies, extreme sleep duration during pregnancy was strongly associated with GDM compared with average sleep duration. The results of the prospective studies showed that both short (OR = 1.50, 95% CI: 1.07–2.10, I2 = 60.9%, p = 0.02) and long (OR = 1.28, 95% CI: 1.13–1.46, I2 = 0.0%, p
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- 2024
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25. Convenient method to improve efficiency of lymph node examination after gastrectomy with D2 lymphadenectomy for gastric cancer
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Hanting Xiang, Zhebin Dong, Hengmiao Wu, Yicheng He, Zhengwei Chen, Sangsang Chen, Weiming Yu, and Chao Liang
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Gastric cancer ,Gastrectomy ,Lymph node examination ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background The D2 procedure has been accepted as the standard treatment for advanced gastric cancer (GC) in East Asia. Determination of the number of lymph nodes (LNs) after gastrectomy may influence the pathological stage assessment of lymph node metastasis, significantly influencing prognostic evaluations and formulation of chemotherapy regimens. Methods Between January 2020 and January 2022, the medical files of 312 patients with clinical stage T0-4aN0-3M0 gastric cancer were reviewed retrospectively, and the patients were assigned to the normal group (lymph nodes were examined roughly), manual group (lymph nodes were manually examined meticulously), and device group (lymph nodes were examined by device). The clinical and pathologic characteristics, number of lymph nodes harvested, and the time required for lymph node examination was compared. Results A total of 312 gastric cancer patients (mean age 65.8 ± 10.3 years, 85 females and 227 males) underwent gastrectomy with curative intent at our department. Sex, age, body mass index (BMI), tumor size, clinical TNM stage, and pathologic TNM stage in the three groups showed no statistically significant differences (P > 0.05). The mean number of harvested lymph nodes in the normal, manual, and device group was 24.2, 36.6 and 35.2, respectively, which showed significant differences (P
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- 2023
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26. Mitochondrial DNA copy number is associated with Crohn’s disease: a comprehensive Mendelian randomization analysis
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Xianlei Cai, Xueying Li, Chao Liang, Miaozun Zhang, Yuan Xu, Zhebin Dong, Yihui Weng, and Weiming Yu
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Medicine ,Science - Abstract
Abstract Mitochondrial DNA plays a critical role in the pathophysiological process of inflammation. However, the relationship between mitochondrial DNA copy number (mtDNA-CN) and inflammatory bowel diseases (IBD) remains poorly understood. We conducted a comprehensive Mendelian randomization (MR) using three instrumental variables (IVs) to explore the causal associations between mtDNA-CN and IBD, including Crohn's disease (CD), ulcerative colitis (UC). MR-Egger regression, weighted median, inverse-variance weighted (IVW), and weighted mode methods were used to evaluate the potential causal associations. The robustness of the IVW estimates was determined using the leave-one-out sensitivity test. A meta-analysis was conducted to pool the results from the three sets of IVs. Upon analysis, the findings of the current study revealed that genetically predicted mtDNA-CN was not associated with IBD (CD + UC) and UC. The results of MR analyses between mtDNA-CN and CD risk were inconsistent by using three sets of IVs. After a meta-analysis, we found that genetically predicted mtDNA-CN was associated with CD risk (odds ratio = 2.09; 95% confidence interval: 1.37–3.18). This finding was also confirmed by multivariable MR analyses and remained robust when tested with the leave-one-out sensitivity test. In conclusion, genetically predicted mtDNA-CN was found to be associated with CD risk. Therefore, mtDNA levels in the blood could potentially be used as a marker for CD risk assessment. Further studies are needed to elucidate the underlying mechanisms and validate the results of this study.
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- 2023
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27. Hydrogenated borophene enabled synthesis of multielement intermetallic catalysts
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Xiaoxiao Zeng, Yudan Jing, Saisai Gao, Wencong Zhang, Yang Zhang, Hanwen Liu, Chao Liang, Chenchen Ji, Yi Rao, Jianbo Wu, Bin Wang, Yonggang Yao, and Shengchun Yang
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Science - Abstract
Abstract Supported metal catalysts often suffer from rapid degradation under harsh conditions due to material failure and weak metal-support interaction. Here we propose using reductive hydrogenated borophene to in-situ synthesize Pt/B/C catalysts with small sizes (~2.5 nm), high-density dispersion (up to 80 wt%Pt), and promising stability, originating from forming Pt-B bond which are theoretically ~5× stronger than Pt-C. Based on the Pt/B/C module, a series (~18 kinds) of carbon supported binary, ternary, quaternary, and quinary Pt intermetallic compound nanocatalysts with sub-4 nm size are synthesized. Thanks to the stable intermetallics and strong metal-support interaction, annealing at 1000 °C does not cause those nanoparticles sintering. They also show much improved activity and stability in electrocatalytic oxygen reduction reaction. Therefore, by introducing the boron chemistry, the hydrogenated borophene derived multielement catalysts enable the synergy of small size, high loading, stable anchoring, and flexible compositions, thus demonstrating high versatility toward efficient and durable catalysis.
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- 2023
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28. Bone disease imaging through the near-infrared-II window
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Chao Mi, Xun Zhang, Chengyu Yang, Jianqun Wu, Xinxin Chen, Chenguang Ma, Sitong Wu, Zhichao Yang, Pengzhen Qiao, Yang Liu, Weijie Wu, Zhiyong Guo, Jiayan Liao, Jiajia Zhou, Ming Guan, Chao Liang, Chao Liu, and Dayong Jin
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Science - Abstract
Abstract Skeletal disorders are commonly diagnosed by X-ray imaging, but the radiation limits its use. Optical imaging through the near-infrared-II window (NIR-II, 1000–1700 nm) can penetrate deep tissues without radiation risk, but the targeting of contrast agent is non-specific. Here, we report that lanthanide-doped nanocrystals can passively target the bone marrow, which can be effective for over two months. We therefore develop the high-resolution NIR-II imaging method for bone disease diagnosis, including the 3D bone imaging instrumentation to show the intravital bone morphology. We demonstrate the monitoring of 1 mm bone defects with spatial resolution comparable to the X-ray imaging result. Moreover, NIR-II imaging can reveal the early onset inflammation as the synovitis in the early stage of rheumatoid arthritis, comparable to micro computed tomography (μCT) in diagnosis of osteoarthritis, including the symptoms of osteophyte and hyperostosis in the knee joint.
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- 2023
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29. Category-Level Object Pose Estimation with Statistic Attention
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Changhong Jiang, Xiaoqiao Mu, Bingbing Zhang, Chao Liang, and Mujun Xie
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pose estimation ,long-range dependencies ,higher-order ,Chemical technology ,TP1-1185 - Abstract
Six-dimensional object pose estimation is a fundamental problem in the field of computer vision. Recently, category-level object pose estimation methods based on 3D-GC have made significant breakthroughs due to advancements in 3D-GC. However, current methods often fail to capture long-range dependencies, which are crucial for modeling complex and occluded object shapes. Additionally, discerning detailed differences between different objects is essential. Some existing methods utilize self-attention mechanisms or Transformer encoder–decoder structures to address the lack of long-range dependencies, but they only focus on first-order information of features, failing to explore more complex information and neglecting detailed differences between objects. In this paper, we propose SAPENet, which follows the 3D-GC architecture but replaces the 3D-GC in the encoder part with HS-layer to extract features and incorporates statistical attention to compute higher-order statistical information. Additionally, three sub-modules are designed for pose regression, point cloud reconstruction, and bounding box voting. The pose regression module also integrates statistical attention to leverage higher-order statistical information for modeling geometric relationships and aiding regression. Experiments demonstrate that our method achieves outstanding performance, attaining an mAP of 49.5 on the 5°2 cm metric, which is 3.4 higher than the baseline model. Our method achieves state-of-the-art (SOTA) performance on the REAL275 dataset.
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- 2024
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30. Author Correction: Hydrogenated borophene enabled synthesis of multielement intermetallic catalysts
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Xiaoxiao Zeng, Yudan Jing, Saisai Gao, Wencong Zhang, Yang Zhang, Hanwen Liu, Chao Liang, Chenchen Ji, Yi Rao, Jianbo Wu, Bin Wang, Yonggang Yao, and Shengchun Yang
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Science - Published
- 2024
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31. Essential genes analysis reveals small ribosomal subunit protein eS28 may be a prognostic factor and potential vulnerability in osteosarcoma
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Chao Liang, Juan Zhou, Yongjie Wang, Yin Sun, Jin Zhou, Lan Shao, Zhichang Zhang, Wangjun Yan, Zhiyan Liu, and Yang Dong
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Osteosarcoma ,CRISPR/Cas9 library ,Ribosome biogenesis ,RPS28 ,eS28 ,MAPK signal pathways ,Diseases of the musculoskeletal system ,RC925-935 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Osteosarcoma, the most common primary malignant bone tumor, is currently treated with surgery combined with chemotherapy, but the limited availability of targeted drugs contributes to a poor prognosis. Identifying effective therapeutic targets is crucial for improving the prognosis of osteosarcoma patients. Methods: We screened the DepMap database to identify essential genes as potential therapeutic targets for osteosarcoma. Gene Set Enrichment Analysis (GSEA) was employed to elucidate the biological roles of these essential genes. Promising candidates were filtered through univariate and multivariate Cox analyses, as well as Kaplan-Meier survival analyses using the GSE21257-OSA and TARGET-OSA datasets. The functional role of the target gene was assessed through cell experiments. Additionally, an in situ nude mice model was established to observe the gene's function, and RNA sequencing was utilized to explore the underlying molecular mechanism. Results: A total of 934 essential genes were identified based on their effects (Chronos) using the DepMap database. These genes were primarily enriched in the ribosome pathway according to GSEA analysis. Among them, 195 genes were associated with the ribosome pathway. Rps28, Rps7, and Rps25 were validated as promising candidates following univariate and multivariate Cox analyses of the TARGET-OSA and GSE21257-OSA datasets. Kaplan-Meier survival analyses indicated Rps28 represented an especially promising target, with high expression correlating with poor prognosis. Knockdown of small ribosomal subunit protein eS28, the protein of Rps28, inhibited proliferation, migration, and invasion in both in vitro and in vivo experiments. Silencing RPS28 affected the MAPK signaling pathway in osteosarcoma. Conclusion: In summary, Rps28 has been identified as an essential gene for osteosarcoma cell survival and eS28 may serve as a potential vulnerability in osteosarcoma.
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- 2024
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32. Arching of force chains in excavated granular material
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Meimei Wang, Jin-An Wang, Fei Li, Chao Liang, and Liu Yang
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force chain network ,spatial correlation ,arch trajectory ,photo-elastic ,granular material ,Science - Abstract
The physical arch and the arch effect are related to many geotechnical problems, such as the stability of mine openings, a tunnel’s shape, and disaster prevention. However, observing the arch in geo-material is challenging due to Earth’s invisible force network distribution. The arch shape is a critical parameter related to the arching effect, which is still an open question. Specifically, the force network evolution after local excavation in granular material is revealed using the photo-elastic technique, and the system pressure variation is calculated qualitatively in particle scale according to the G2 algorithm. Besides, the force chain arch is formed by strong force chains, which are important in redistributing the stress field. The principal direction of the spatial correlation colormap represents the direction of the strong force chains in the network. Based on this preferred angle between the strong force chain and the horizontal direction, a simplified force chain arch trajectory is iteratively rebuilt. Then, the total force chain distribution is studied considering both G2 and the total length of strong force chains, with the corresponding results demonstrating a relationship between the changes in these characteristics and the force chain arch formation.
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- 2024
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33. Identification of a novel B-cell epitope of the African swine fever virus p34 protein and development of an indirect ELISA for the detection of serum antibodies
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Yuanyuan Tian, Chao Liang, Jingming Zhou, Fanglin Sun, Yankai Liu, Yumei Chen, Xifang Zhu, Hongliang Liu, Peiyang Ding, Enping Liu, Ying Zhang, Sixuan Wu, and Aiping Wang
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African swine fever virus ,p34 protein ,monoclonal antibody ,B-cell epitope ,antibody detection ,ELISA ,Microbiology ,QR1-502 - Abstract
African swine fever (ASF) is a viral disease caused by the African swine fever virus that can be highly transmitted and lethal in domestic pigs. In the absence of a vaccine, effective diagnosis is critical for minimizing the virus’s spread. In recent years, with the decline of African swine fever virus (ASFV) virulence, antibody detection has become an important means of detection. ASFV nucleocapsid protein p34 is a mature hydrolytic product of pp220, which is highly conserved and has a high content in the structural protein of the virus. Prokaryotic cells were chosen to generate highly active and high-yield p34 protein, which was then used as an antigen for producing mouse monoclonal antibodies. The B-cell epitope 202QKELDKLQT210, which was highly conserved and found on the surface of the p34 protein, was first identified by an anti-p34 monoclonal antibody utilizing the peptide scanning technique and visualized in helix. This supported the viability of p34 protein detection even further. In addition, we established an indirect ELISA assay based on p34 to detect ASFV antibodies. The coincidence rate of this method with commercially available kits was shown to be 97.83%. Sensitivity analysis revealed that it could be detected in serum dilution as low as 1:6400, and there was no cross-reaction with other prevalent porcine epidemic diseases classical swine fever virus (CSFV), foot-and-mouth disease virus (FMDV), porcine reproductive and respiratory syndrome virus (PRRSV), and porcine circovirus 2 (PCV2). In summary, the established ELISA method and anti-P34 monoclonal antibody have demonstrated that the p34 protein has a promising application prospect for the detection of African swine fever antibodies.
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- 2024
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34. Material symmetry recognition and property prediction accomplished by crystal capsule representation
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Chao Liang, Yilimiranmu Rouzhahong, Caiyuan Ye, Chong Li, Biao Wang, and Huashan Li
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Science - Abstract
Abstract Learning the global crystal symmetry and interpreting the equivariant information is crucial for accurately predicting material properties, yet remains to be fully accomplished by existing algorithms based on convolution networks. To overcome this challenge, here we develop a machine learning (ML) model, named symmetry-enhanced equivariance network (SEN), to build material representation with joint structure-chemical patterns, to encode important clusters embedded in the crystal structure, and to learn pattern equivariance in different scales via capsule transformers. Quantitative analyses of the intermediate matrices demonstrate that the intrinsic crystal symmetries and interactions between clusters have been exactly perceived by the SEN model and critically affect the prediction performances by reducing effective feature space. The mean absolute errors (MAEs) of 0.181 eV and 0.0161 eV/atom are obtained for predicting bandgap and formation energy in the MatBench dataset. The general and interpretable SEN model reveals the potential to design ML models by implicitly encoding feature relationship based on physical mechanisms.
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- 2023
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35. An Evaluation and Reduction Approach for the Ground Vibration Induced by High Dam Flood Discharge
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Jijian Lian, Yan Zheng, Chao Liang, Yutong Li, Bin Ma, Fang Liu, and Ye Yao
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vibration control ,hydrodynamic load ,stilling basin plate optimization ,theoretical and numerical analysis ,verification by prototype tests ,Hydraulic engineering ,TC1-978 ,Water supply for domestic and industrial purposes ,TD201-500 - Abstract
Ground vibration induced by high dam flood discharge has been reported to cause severe structure safety threats and environmental issues. In this paper, an evaluation and reduction approach for ground vibration using systematic and comprehensive studies is proposed. Based on the results of hydraulic physical model tests, the hydrodynamic excitation on the stilling basin plate (SBP) is analytically expressed as spatially variable harmonic loads by the three-dimensional least squares method. Afterwards, a theoretical model for the SBP–foundation coupled system is established and the vibration of SBP subjected to analytical hydrodynamic load input is calculated. The ground vibration is further evaluated through the numerical simulation regarding the SBP vibration as the input load. According to the prototype test result, it is found that the variation trend of evaluation results under different working conditions is consistent with the actual situation, which indicates the effectiveness of this evaluation approach. Furthermore, the sensitivity analysis of SBP physical dimensions to ground vibration is conducted, and an optimized design for SBP is presented as a result. The verification results indicate that ground vibration can be significantly reduced by applying SBP optimization.
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- 2024
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36. Characterizing Spatial and Temporal Variations in N2O Emissions from Dairy Manure Management in China Based on IPCC Methodology
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Bin Hu, Lijie Zhang, Chao Liang, Xiao Yang, Zhengxiang Shi, and Chaoyuan Wang
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manure management ,nitrous oxide ,emission estimation ,emission factor ,uncertainty ,Agriculture (General) ,S1-972 - Abstract
The emission factor method (Tier 1) recommended by the Intergovernmental Panel on Climate Change (IPCC) is commonly used to estimate greenhouse gas (GHG) emissions from livestock and poultry farms. However, the estimation accuracy may vary due to practical differences in manure management across China. The objectives of this study were to estimate the direct and indirect nitrous oxide (N2O) emissions from dairy manure management between 1990 and 2021 in China and characterize its spatial and temporal variations following IPCC guideline Tier 2. The N2O emission factor (EF) of dairy cow manure management systems was determined at the national level and regional level as well. The results showed that the national cumulative N2O emission of manure management from 1990 to 2021 was 113.1million tons of CO2 equivalent, ranging from 90.3 to 135.9 million tons with an uncertainty of ±20.2%. The annual EF was 0.021 kg N2O-N (kg N)−1 for total emissions, while it was 0.014 kg N2O-N (kg N)−1 for direct emissions. The proportions of N2O emissions in North China, Northeast China, East China, Central and Southern China, Southwest China and Northwest China were 32.3%, 18.6%, 11.4%, 5.8%, 6.1% and 25.8%, respectively. In addition, N2O emissions varied among farms in different scales. The respective proportions of total N2O emissions from small-scale and large-scale farms were 64.8% and 35.2% in the past three decades. With the improvement in farm management and milk production efficiency, the N2O emissions per unit mass of milk decreased from 0.77 × 10−3 kg to 0.48 × 10−3 kg in 1990–2021. This study may provide important insights into compiling a GHG emission inventory and developing GHG emission reduction strategies for the dairy farming system in China.
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- 2024
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37. Efficacy and safety of LY01005 versus goserelin implant in Chinese patients with prostate cancer: A multicenter, randomized, open-label, phase III, non-inferiority trial
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Chengyuan Gu, Zengjun Wang, Tianxin Lin, Zhiyu Liu, Weiqing Han, Xuhui Zhang, Chao Liang, Hao Liu, Yang Yu, Zhenzhou Xu, Shuang Liu, Jingen Wang, Linghua Jia, Xin Yao, Wenfeng Liao, Cheng Fu, Zhaohui Tan, Guohua He, Guoxi Zhu, Rui Fan, Wenzeng Yang, Xin Chen, Zhizhong Liu, Liqiang Zhong, Benkang Shi, Degang Ding, Shubo Chen, Junli Wei, Xudong Yao, Ming Chen, Zhanpeng Lu, Qun Xie, Zhiquan Hu, Yinhuai Wang, Hongqian Guo, Tiwu Fan, Zhaozhao Liang, Peng Chen, Wei Wang, Tao Xu, Chunsheng Li, Jinchun Xing, Hong Liao, Dalin He, Zhibin Wu, Jiandi Yu, Zhongwen Feng, Mengxiang Yang, Qifeng Dou, Quan Zeng, Yuanwei Li, Xin Gou, Guangchen Zhou, Xiaofeng Wang, Rujian Zhu, Zhonghua Zhang, Bo Zhang, Wanlong Tan, Xueling Qu, Hongliang Sun, Tianyi Gan, Dingwei Ye, Jinjiao Li, and Yuanyuan Ji
- Subjects
Medicine - Abstract
Abstract. Background:. LY01005 (Goserelin acetate sustained-release microsphere injection) is a modified gonadotropin-releasing hormone (GnRH) agonist injected monthly. This phase III trial study aimed to evaluated the efficacy and safety of LY01005 in Chinese patients with prostate cancer. Methods:. We conducted a randomized controlled, open-label, non-inferiority trial across 49 sites in China. This study included 290 patients with prostate cancer who received either LY01005 or goserelin implants every 28 days for three injections. The primary efficacy endpoints were the percentage of patients with testosterone suppression ≤50 ng/dL at day 29 and the cumulative probability of testosterone ≤50 ng/dL from day 29 to 85. Non-inferiority was prespecified at a margin of -10%. Secondary endpoints included significant castration (≤20 ng/dL), testosterone surge within 72 h following repeated dosing, and changes in luteinizing hormone, follicle-stimulating hormone, and prostate specific antigen levels. Results:. On day 29, in the LY01005 and goserelin implant groups, testosterone concentrations fell below medical-castration levels in 99.3% (142/143) and 100% (140/140) of patients, respectively, with a difference of -0.7% (95% confidence interval [CI], -3.9% to 2.0%) between the two groups. The cumulative probabilities of maintaining castration from days 29 to 85 were 99.3% and 97.8%, respectively, with a between-group difference of 1.5% (95% CI, -1.3% to 4.4%). Both results met the criterion for non-inferiority. Secondary endpoints were similar between groups. Both treatments were well-tolerated. LY01005 was associated with fewer injection-site reactions than the goserelin implant (0% vs. 1.4% [2/145]). Conclusion:. LY01005 is as effective as goserelin implants in reducing testosterone to castration levels, with a similar safety profile. Trial registration:. ClinicalTrials.gov, NCT04563936.
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- 2023
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38. Improved YOLOv5 infrared tank target detection method under ground background
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Chao Liang, Zhengang Yan, Meng Ren, Jiangpeng Wu, Liping Tian, Xuan Guo, and Jie Li
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Medicine ,Science - Abstract
Abstract The detection precision of infrared seeker directly affects the guidance precision of infrared guidance system. To solve the problem of low target detection accuracy caused by the change of imaging scale, complex ground background and inconspicuous infrared target characteristics when infrared image seeker detects ground tank targets. In this paper, a You Only Look Once, Transform Head Squeeze-and-Excitation (YOLOv5s-THSE) model is proposed based on the YOLOv5s model. A multi-head attention mechanism is added to the backbone and neck of the network, and deeper target features are extracted using the multi-head attention mechanism. The Cross Stage Partial, Squeeze-and-Exclusion module is added to the neck of the network to suppress the complex background and make the model pay more attention to the target. A small object detection head is introduced into the head of the network, and the CIoU loss function is used in the model to improve the detection accuracy of small objects and obtain more stable training regression. Through these several improvement measures, the background of the infrared target is suppressed, and the detection ability of infrared tank targets is improved. Experiments on infrared tank target datasets show that our proposed model can effectively improve the detection performance of infrared tank targets under ground background compared with existing methods, such as YOLOv5s, YOLOv5s + SE, and YOLOV 5 s + Convective Block Attention Module.
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- 2023
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39. Strain Effects on Flexible Perovskite Solar Cells
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Hongbo Liang, Wenhan Yang, Junmin Xia, Hao Gu, Xiangchuan Meng, Gege Yang, Ying Fu, Bin Wang, Hairui Cai, Yiwang Chen, Shengchun Yang, and Chao Liang
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flexible perovskite solar cells ,power conversion efficiency ,stability ,strain ,stress ,Science - Abstract
Abstract Flexible perovskite solar cells (f‐PSCs) as a promising power source have grabbed surging attention from academia and industry specialists by integrating with different wearable and portable electronics. With the development of low‐temperature solution preparation technology and the application of different engineering strategies, the power conversion efficiency of f‐PSCs has approached 24%. Due to the inherent properties and application scenarios of f‐PSCs, the study of strain in these devices is recognized as one of the key factors in obtaining ideal devices and promoting commercialization. The strains mainly from the change of bond and lattice volume can promote phase transformation, induce decomposition of perovskite film, decrease mechanical stability, etc. However, the effect of strain on the performance of f‐PSCs has not been systematically summarized yet. Herein, the sources of strain, evaluation methods, impacts on f‐PSCs, and the engineering strategies to modulate strain are summarized. Furthermore, the problems and future challenges in this regard are raised, and solutions and outlooks are offered. This review is dedicated to summarizing and enhancing the research into the strain of f‐PSCs to provide some new insights that can further improve the optoelectronic performance and stability of flexible devices.
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- 2023
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40. The impact of drug-eluting bead (vs. conventional) transarterial chemoembolization on hepatic fibrosis in treating intermediate or advanced hepatocellular carcinoma
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Hao Li, Chao Liang, Donglin Kuang, Guohao Huang, Mengfan Zhang, Pengfei Chen, Qingzhu Zheng, Wenze Xu, Jianzhuang Ren, Xinwei Han, and Xuhua Duan
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hepatocellular carcinoma ,drug-eluting bead transarterial chemoembolization ,conventional transarterial chemoembolization ,hepatic fibrosis ,safety ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Objective Limited studies have reported the impact of drug-eluting bead transarterial chemoembolization (DEB-TACE) on hepatic fibrosis in hepatocellular carcinoma (HCC). This study evaluated multiple hepatic fibrosis indicators, aiming to comprehensively compare the influence of DEB-TACE and conventional transarterial chemoembolization (cTACE) on hepatic fibrosis in treating HCC patients. Methods Intermediate/advanced HCC patients (N = 121) were divided into the DEB-TACE group (n = 62) and the cTACE group (n = 59) based on their chosen treatment. Serum hyaluronic acid (HA), pro-collagen type-III (PC-III), collagen type-IV (IV-C), and laminin (LN) were detected; aminotransferase to platelet ratio index (APRI) and fibrosis index based on the four factors (FIB-4) were calculated; liver stiffness measurement (LSM) was assessed by real-time shear wave elastography. Results HA, PC-III, IV-C, and LN at 1 month after the second TACE and at 12 months after the first TACE were all decreased in DEB-TACE group compared with cTACE group (all P .050). Conclusion DEB-TACE displays attenuated hepatic fibrosis progression and noninferior tolerance compared to cTACE in treating intermediate- or advanced-stage HCC patients.
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- 2023
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41. JCCM: Joint conformer and CNN model for overlapping radio signals recognition
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Junbin Liang, Xiaofan Li, Chao Liang, Hao Tong, Xiaoyan Mai, and Rui Kong
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blind source separation ,signal classification ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Abstract Overlapping radio signals recognition is attracting more attention as the development and ubiquitous application of radio technologies. The traditional blind signal separation (BSS) method is mostly not effective when both radio propagation effects and low signal‐to‐noise ratio (SNR) scenarios are taken into consideration. In this letter, joint conformer and CNN model (JCCM) is proposed to separate and recognize the overlapping radio signals which are also unknown by the monitor node. JCCM utilizes the attention mechanism of conformer to encode signal spectrum into feature maps and decodes the feature maps into signal component proportions by perceiving the global and local features through convolutional neural networks (CNN). In addition, a signal preprocessing module is designed including MinPool and AvgPool layers for signal denoising. JCCM is evaluated in terms of signal separation, scaling preservation and principal signal classification experiments. The results show that JCCM has better performance especially in low SNR conditions.
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- 2023
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42. Bronchial balloon dilatation combined with cryotherapy for tuberculous cicatricial central airway stenosis, with Adobe Photoshop for the degree measurement: A multicenter, retrospective study
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Taomei Lian, Chao Liang, Shouyuan Yu, Zongxin Feng, Hongwei Ren, Ke Xu, Xin Liu, and Kunying Li
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Cicatricial central airway stenosis ,Balloon dilatation ,Cryotherapy ,Photoshop image processing technology ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Objective: To explore bronchial balloon dilation (BD) combined with cryotherapy and Photoshop (PS)-base image processing technology in the interventional treatment of tuberculous cicatricial central airway stenosis (CCAS). Methods: This multicenter, retrospective study analyzed the clinical data of patients with CCAS from six hospitals in Henan, China between June 2019 and October 2022. Results: A total of 307 patients were included, including 152 (62 males) treated with BD alone and 155 (54 males) treated with BD combined with cryotherapy. One month after treatment, compared with the BD group, the total response rate [133 (85.8) vs. 105 (69.1), P
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- 2023
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43. Opioid-free anesthesia reduces the severity of acute postoperative motion-induced pain and patient-controlled epidural analgesia-related adverse events in lung surgery: randomized clinical trial
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Shuwei Wang, Yi Li, Chao Liang, Xiaodan Han, Jiaxing Wang, and Changhong Miao
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video-assisted lung surgery ,opioid-free anesthesia ,acute postoperative pain ,PCEA-related adverse event ,opioid-sparing anesthesia ,Medicine (General) ,R5-920 - Abstract
BackgroundOpioids have been used as pain relievers for thousands of years. However, they may also cause undesirable side effects. We therefore performed this study to compare the effect of opioid-free anesthesia (OFA) versus opioid-sparing anesthesia (OSA) on postoperative pain and patient-controlled epidural analgesia (PCEA)-related events.MethodsThis is a single center randomized clinical trial that was recruited patients aged from 18 to 70 years who received video-assisted lung surgery between October 2021 and February 2022. Participants were 1:1 randomly assigned to OFA or OSA. Patients in the OFA group received propofol, rocuronium, esmolol, lidocaine, and magnesium sulfate intravenously with epidural ropivacaine. Patients in the OSA group received propofol, rocuronium, remifentanil, and sufentanil intravenously with epidural hydromorphone and ropivacaine.ResultsA total number of 124 patients were randomly allocated to the OFA or OSA group. In the OFA group, the severity of pain during coughs on the first postoperative days (PODs; VAS score 1.88 ± 0.88 vs. 2.16 ± 1.1, p = 0.044) was significantly lower than that in the OSA group. The total ratio of PCEA-related adverse events in the OFA group [11 (19.6%) vs. 26 (47.3%), p = 0.003] was significantly lower than in the OSA group.ConclusionOFA in patients who received video-assisted lung surgery led to lower severity of acute postoperative motion-induced pain and fewer PCEA-related adverse events on the first POD than in the patients in the OSA group.Clinical trial registrationclinicaltrials.gov, identifier (NCT05063396).
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- 2023
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44. Study on secondary metabolites of endophytic fungus Diaporthe sp. AC1 induced by tryptophan analogs
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Shikai Zhang, Qing Xu, Changbo Ji, Xiaoyu Han, Yang Zhou, Chao Liang, Linran Ma, Weijian Sun, Yanling Li, Zhengyou Yang, Fengchun Zhao, and Yuan Tian
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Diaporthe ,endophytic fungi ,1-methyl-L-tryptophan ,secondary metabolites ,biological activity ,Microbiology ,QR1-502 - Abstract
Small molecule-induced fermentation of the endophytic fungus Diaporthe sp. AC1 originated from Artemisia argyi was executed to investigate its secondary metabolites. It was fermented in a culture medium containing 5-hydroxytryptophan (5-HTP), 1-methyl-L-tryptophan (1-MT), and tryptamine (TA), respectively. The antibacterial activities of crude extracts against pathogenic bacteria and pathogenic fungi were determined by using the Oxford cup method, while the cytotoxicity of crude extracts against cancer cells was determined by using the MTT method. The results showed that the secondary metabolites of Diaporthe sp. AC1 induced by 1-MT exhibited optimal antibacterial activity and tumor cytotoxicity. The induction conditions of 1-MT were optimized, and the antibacterial activities and tumor cytotoxicity of crude extracts under different induction conditions were investigated. As indicated, the optimal moment for 1-MT addition was before inoculation and its optimal concentration was 0.25 mM. Under these conditions, Diaporthe sp. AC1 was fermented and approximately 12 g of crude extracts was obtained. The crude extracts were then separated and purified to acquire nine monomer compounds, including three new compounds (1–3) and six known compounds (4–9). The antibacterial activities of the compounds against pathogenic bacteria and pathogenic fungi were investigated by using the microdilution method, while their cytotoxicity against cancer cells was analyzed by using the MTT method. The results demonstrated that Compound 1 exhibited moderate antibacterial activities against Verticillium dahlia, Fusarium graminearum, and Botrytis cinerea, as well as a low inhibitory activity against Listeria monocytogenes. Nevertheless, Compound 1 showed significant cytotoxicity against five cancer cells, with IC50 ranging from 12.26 to 52.52 μM. Compounds 2 and 3 exhibited negligible biological activity, while other compounds showed detectable inhibitory activities against pathogenic bacteria and cancer cells.
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- 2023
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45. Bacterial outer membrane vesicle based versatile nanosystem boosts the efferocytosis blockade triggered tumor-specific immunity
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Wan-Ru Zhuang, Yunfeng Wang, Weidong Nie, Yao Lei, Chao Liang, Jiaqi He, Liping Zuo, Li-Li Huang, and Hai-Yan Xie
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Science - Abstract
Efferocytosis inhibition leads to the release of immunogenic contents into the tumor microenvironment. Here the authors developed a nanosystem that inhibits MerTK-mediated efferocytosis and captures tumor-associated agents to enhance antitumour immunity.
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- 2023
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46. Understanding nonlinear and synergistic effects of the built environment on urban vibrancy in metro station areas
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Jiandong Peng, Yiwen Hu, Chao Liang, Qiuyu Wan, Qi Dai, and Hong Yang
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Urban vibrancy ,TOD ,Built environment ,Gradient boosting decision tree ,Nonlinear effects ,Synergistic effects ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Abstract Transit-oriented development (TOD) has long been recognized as a significant model for prospering urban vibrancy. However, most studies on TOD and urban vibrancy do not consider temporal differences or the nonlinear effects involved. This study applies the gradient boosting decision tree (GBDT) model to metro station areas in Wuhan to explore the nonlinear and synergistic effects of the built-environment features on urban vibrancy during different times. The results show that (1) the effects of the built-environment features on the vibrancy around metro stations differ over time; (2) the most critical features affecting vibrancy are leisure facilities, floor area ratio, commercial facilities, and enterprises; (3) there are approximately linear or complex nonlinear relationships between the built-environment features and the vibrancy; and (4) the synergistic effects suggest that multimodal is more effective at leisure-dominated stations, high-density development is more effective at commercial-dominated stations, and mixed development is more effective at employment-oriented stations. The findings suggest improved planning recommendations for the organization of rail transport to improve the vibrancy of metro station areas.
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- 2023
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47. Enzalutamide and olaparib synergistically suppress castration-resistant prostate cancer progression by promoting apoptosis through inhibiting nonhomologous end joining pathway
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Hui-Yu Dong, Pan Zang, Mei-Ling Bao, Tian-Ren Zhou, Chen-Bo Ni, Lei Ding, Xu-Song Zhao, Jie Li, and Chao Liang
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apoptosis ,enzalutamide ,nonhomologous end joining ,olaparib ,prostate cancer ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Recent studies revealed the relationship among homologous recombination repair (HRR), androgen receptor (AR), and poly(adenosine diphosphate-ribose) polymerase (PARP); however, the synergy between anti-androgen enzalutamide (ENZ) and PARP inhibitor olaparib (OLA) remains unclear. Here, we showed that the synergistic effect of ENZ and OLA significantly reduced proliferation and induced apoptosis in AR-positive prostate cancer cell lines. Next-generation sequencing followed by Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses revealed the significant effects of ENZ plus OLA on nonhomologous end joining (NHEJ) and apoptosis pathways. ENZ combined with OLA synergistically inhibited the NHEJ pathway by repressing DNA-dependent protein kinase catalytic subunit (DNA-PKcs) and X-ray repair cross complementing 4 (XRCC4). Moreover, our data showed that ENZ could enhance the response of prostate cancer cells to the combination therapy by reversing the anti-apoptotic effect of OLA through the downregulation of anti-apoptotic gene insulin-like growth factor 1 receptor (IGF1R) and the upregulation of pro-apoptotic gene death-associated protein kinase 1 (DAPK1). Collectively, our results suggested that ENZ combined with OLA can promote prostate cancer cell apoptosis by multiple pathways other than inducing HRR defects, providing evidence for the combined use of ENZ and OLA in prostate cancer regardless of HRR gene mutation status.
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- 2023
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48. FOXA1 in prostate cancer
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Hui-Yu Dong, Lei Ding, Tian-Ren Zhou, Tao Yan, Jie Li, and Chao Liang
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androgen receptor ,forkhead box protein a1 ,mutation ,prostate cancer ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Most prostate cancers initially respond to androgen deprivation therapy (ADT). With the long-term application of ADT, localized prostate cancer will progress to castration-resistant prostate cancer (CRPC), metastatic CRPC (mCRPC), and neuroendocrine prostate cancer (NEPC), and the transcriptional network shifted. Forkhead box protein A1 (FOXA1) may play a key role in this process through multiple mechanisms. To better understand the role of FOXA1 in prostate cancer, we review the interplay among FOXA1-targeted genes, modulators of FOXA1, and FOXA1 with a particular emphasis on androgen receptor (AR) function. Furthermore, we discuss the distinct role of FOXA1 mutations in prostate cancer and clinical significance of FOXA1. We summarize possible regulation pathways of FOXA1 in different stages of prostate cancer. We focus on links between FOXA1 and AR, which may play different roles in various types of prostate cancer. Finally, we discuss FOXA1 mutation and its clinical significance in prostate cancer. FOXA1 regulates the development of prostate cancer through various pathways, and it could be a biomarker for mCRPC and NEPC. Future efforts need to focus on mechanisms underlying mutation of FOXA1 in advanced prostate cancer. We believe that FOXA1 would be a prognostic marker and therapeutic target in prostate cancer.
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- 2023
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49. Improving the understanding of PI-RADS in practice: characters of PI-RADS 4 and 5 lesions with negative biopsy
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Yu-Hao Wang, Chao Liang, Fei-Peng Zhu, Tian-Ren Zhou, Jie Li, Zeng-Jun Wang, and Bian-Jiang Liu
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biopsy ,negative ,pi-rads 4 and 5 ,prostate cancer ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
The Prostate Imaging Reporting and Data System (PI-RADS) has good ability to identify the nature of lesions on prostate magnetic resonance imaging (MRI). However, some lesions are still reported as PI-RADS 4 and 5 but are biopsy-proven benign. Herein, we aimed to summarize the reasons for the negative prostate biopsy of patients who were assessed as PI-RADS 4 and 5 by biparameter MRI. We retrospectively sorted out the prostate MRI, treatment, and follow-up results of patients who underwent a biparameter MRI examination of the prostate in The First Affiliated Hospital of Nanjing Medical University (Nanjing, China) from August 2019 to June 2021 with PI-RADS 4 and 5 but a negative biopsy. We focused on reviewing the MRI characteristics. A total of 467 patients underwent transperineal prostate biopsy. Among them, biopsy pathology of 93 cases were negative. After follow-up, 90 patients were ruled out of prostate cancer. Among the 90 cases, 40 were considered to be overestimated PI-RADS after review. A total of 22 cases were transition zone (TZ) lesions with regular appearance and clear boundaries, and 3 cases were symmetrical lesions. Among 15 cases, the TZ nodules penetrated the peripheral zone (PZ) and were mistaken for the origin of PZ. A total of 17 cases of lesions were difficult to distinguish from prostate cancer. Among them, 5 cases were granulomatous inflammation (1 case of prostate tuberculosis). A total of 33 cases were ambiguous lesions, whose performance was between PI-RADS 3 and 4. In summary, the reasons for “false-positive MRI diagnosis” included PI-RADS overestimation, ambiguous images giving higher PI-RADS, diseases that were really difficult to distinguish, and missed lesion in the initial biopsy; and the first two accounted for the most.
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- 2023
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50. Design and Implementation of a Flexible Electromagnetic Actuator for Tunable Terahertz Metamaterials
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Shengru Zhou, Chao Liang, Ziqi Mei, Rongbo Xie, Zhenci Sun, Ji Li, Wenqiang Zhang, Yong Ruan, and Xiaoguang Zhao
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electromagnetic actuator ,MEMS ,flexible polyimide ,tunable terahertz metamaterial ,Mechanical engineering and machinery ,TJ1-1570 - Abstract
Actuators play a crucial role in microelectromechanical systems (MEMS) and hold substantial potential for applications in various domains, including reconfigurable metamaterials. This research aims to design, fabricate, and characterize structures for the actuation of the EMA. The electromagnetic actuator overcomes the lack of high drive voltage required by other actuators. The proposed actuator configuration comprises supporting cantilever beams with fixed ends, an integrated coil positioned above the cantilever’s movable plate, and a permanent magnet located beneath the cantilever’s movable plate to generate a static magnetic field. Utilizing flexible polyimide, the fabrication process of the EMA is simplified, overcoming limitations associated with silicon-based micromachining techniques. Furthermore, this approach potentially enables large-scale production of EMA, with displacement reaching up to 250 μm under a 100 mA current, thereby expanding their scope of applications in manufacturing. To demonstrate the function of the EMA, we integrated it with a metamaterial structure to form a compact, tunable terahertz absorber, demonstrating a potential for reconfigurable electromagnetic space.
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- 2024
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