258 results on '"Conor R. Caffrey"'
Search Results
2. Structure activity relationships of antischistosomal N-phenylbenzamides by incorporation of electron-withdrawing functionalities
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Ameera Mohammed Dawoodjee, John Sichinga, Harrison Banda, Steve Mbaya, Evelyn Funjika, Godfrey Mayoka, Christabel Hikaambo, Karol R. Francisco, Yujie Uli Sun, Lawrence J. Liu, Conor R. Caffrey, and Peter Mubanga Cheuka
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N-phenylbenzamide analogs ,N-pyridazinylbenzamide analogs ,Schistosoma mansoni ,Chemistry ,QD1-999 - Abstract
For the adult Schistosoma mansoni flatworm pathogen, we report further structure activity relationships (SAR) of 19 N-phenylbenzamide analogs. Our previous SAR studies, designed by selecting representative substituents from the Craig plot, identified 9 and 11 which possessed electron-withdrawing groups that benefited potency. This study sought to enhance the potency of this chemotype by incorporating other electron-withdrawing functionalities not studied previously and to overcome the potential pharmacokinetic liabilities associated with the high lipophilicity of frontrunner compounds. Compared to the most potent compound, 9 (EC50 = 80 nM), from our previous work, the most potent compounds in the current study (32 (EC50 = 1.17 µM), 34 (EC50 = 1.64 µM) and 38 (EC50 = 1.16 µM)) were less active although they retained single digit micromolar potency. Furthermore, compound 38 generated a CC50 value of > 20 µM in counter toxicity screens using HEK 293 cells, translating to a wide selectivity index of > 17.
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- 2024
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3. Pharmacophore Virtual Screening Identifies Riboflavin as an Inhibitor of the Schistosome Cathepsin B1 Protease with Antiparasitic Activity
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Ramon M. Cogo, Thaís F. A. Pavani, Ana C. A. Mengarda, Rayssa A. Cajas, Thainá R. Teixeira, Lucas Fukui-Silva, Yujie Uli Sun, Lawrence J. Liu, Dilini K. Amarasinghe, Michael C. Yoon, Osvaldo A. Santos-Filho, Josué de Moraes, Conor R. Caffrey, and Daniela G. G. Rando
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Chemistry ,QD1-999 - Published
- 2024
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4. Computational Workflow to Design Novel Vaccine Candidates and Small-Molecule Therapeutics for Schistosomiasis
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Emmanuel Oluwadare Balogun, Gideon Ibrahim Joseph, Samuel Charles Olabode, Naziru Abdulkadir Dayaso, Ammar Usman Danazumi, Rachael Bashford-Rogers, James H. Mckerrow, Ghulam Jeelani, and Conor R. Caffrey
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Schistosoma ,drug and vaccine ,immunoinformatics ,cathepsin proteases ,Medicine - Abstract
Human schistosomiasis, caused by the Schistosoma trematode, is a neglected parasitic disease affecting over 250 million people worldwide. There is no vaccine, and the single available drug is threatened by drug resistance. This study presents a computational approach to designing multiepitope vaccines (MEVs) targeting the cercarial (CMEV) and schistosomular (SMEV) stages of schistosomes, and identifies potential schistosomicidal compounds from the Medicine for Malaria Ventures (MMV) and SuperNatural Database (SND) libraries. The designed vaccines (CMEV and SMEV) are engineered to provoke robust immune responses by incorporating a blend of T- and B-cell epitopes. Structural and immunoinformatics evaluations predicted robust interactions of CMEV and SMEV with key immune receptors and prolonged immune responses. In addition, molecular docking identified several compounds from the MMV and SND libraries with strong binding affinities to vital Schistosoma cathepsin proteases, indicating their potential as schistosomicidal agents. Our findings contribute to the potential development of effective vaccines and drugs against schistosomiasis.
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- 2024
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5. Seaweeds and Corals from the Brazilian Coast: Review on Biotechnological Potential and Environmental Aspects
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Gustavo Souza dos Santos, Thais Luz de Souza, Thaiz Rodrigues Teixeira, João Pedro Cezário Brandão, Keila Almeida Santana, Luan Henrique Santos Barreto, Samantha de Souza Cunha, Daniele Cristina Muniz Batista dos Santos, Conor R. Caffrey, Natan Silva Pereira, and Aníbal de Freitas Santos Júnior
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Brazilian shoreline ,seaweeds ,corals ,secondary metabolites ,bioactivity ,nutrients ,Organic chemistry ,QD241-441 - Abstract
Brazil has a megadiversity that includes marine species that are distributed along 800 km of shoreline. This biodiversity status holds promising biotechnological potential. Marine organisms are important sources of novel chemical species, with applications in the pharmaceutical, cosmetic, chemical, and nutraceutical fields. However, ecological pressures derived from anthropogenic actions, including the bioaccumulation of potentially toxic elements and microplastics, impact promising species. This review describes the current status of the biotechnological and environmental aspects of seaweeds and corals from the Brazilian coast, including publications from the last 5 years (from January 2018 to December 2022). The search was conducted in the main public databases (PubChem, PubMed, Science Direct, and Google Scholar) and in the Espacenet database (European Patent Office—EPO) and the Brazilian National Property Institute (INPI). Bioprospecting studies were reported for seventy-one seaweed species and fifteen corals, but few targeted the isolation of compounds. The antioxidant potential was the most investigated biological activity. Despite being potential sources of macro- and microelements, there is a literature gap regarding the presence of potentially toxic elements and other emergent contaminants, such as microplastics, in seaweeds and corals from the Brazilian coast.
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- 2023
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6. A multi-dimensional, time-lapse, high content screening platform applied to schistosomiasis drug discovery
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Steven Chen, Brian M. Suzuki, Jakob Dohrmann, Rahul Singh, Michelle R. Arkin, and Conor R. Caffrey
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Biology (General) ,QH301-705.5 - Abstract
Steven Chen et al. develop an automated, time-lapsed, high-content screen to quantify the responses of Schistosoma mansoni larvae to chemical insult. They apply their method to evaluate 45 static and kinetic response endpoints for seven drugs and screen 1323 approved drugs. Their work identifies anti-schistosomal compounds and underscores the value of quantifying motion in phenotypic drug discovery.
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- 2020
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7. Design, synthesis, and in vitro evaluation of aza-peptide aldehydes and ketones as novel and selective protease inhibitors
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Thomas S. Corrigan, Leilani M. Lotti Diaz, Sarah E. Border, Steven C. Ratigan, Kayla Q. Kasper, Daniel Sojka, Pavla Fajtova, Conor R. Caffrey, Guy S. Salvesen, Craig A. McElroy, Christopher M. Hadad, and Özlem Doğan Ekici
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proteasome inhibitor ,caspase and legumain inhibitors ,aza-peptide carbonyls ,anticancer ,antiparasitic ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Aza-peptide aldehydes and ketones are a new class of reversible protease inhibitors that are specific for the proteasome and clan CD cysteine proteases. We designed and synthesised aza-Leu derivatives that were specific for the chymotrypsin-like active site of the proteasome, aza-Asp derivatives that were effective inhibitors of caspases-3 and -6, and aza-Asn derivatives that inhibited S. mansoni and I. ricinus legumains. The crystal structure of caspase-3 in complex with our caspase-specific aza-peptide methyl ketone inhibitor with an aza-Asp residue at P1 revealed a covalent linkage between the inhibitor carbonyl carbon and the active site cysteinyl sulphur. Aza-peptide aldehydes and ketones showed no cross-reactivity towards cathepsin B or chymotrypsin. The initial in vitro selectivity of these inhibitors makes them suitable candidates for further development into therapeutic agents to potentially treat multiple myeloma, neurodegenerative diseases, and parasitic infections.
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- 2020
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8. Biomechanical interactions of Schistosoma mansoni eggs with vascular endothelial cells facilitate egg extravasation
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Yi-Ting Yeh, Danielle E. Skinner, Ernesto Criado-Hidalgo, Natalie Shee Chen, Antoni Garcia-De Herreros, Nelly El-Sakkary, Lawrence Liu, Shun Zhang, Adithan Kandasamy, Shu Chien, Juan C. Lasheras, Juan C. del Álamo, and Conor R. Caffrey
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Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Abstract
The eggs of the parasitic blood fluke, Schistosoma, are the main drivers of the chronic pathologies associated with schistosomiasis, a disease of poverty afflicting approximately 220 million people worldwide. Eggs laid by Schistosoma mansoni in the bloodstream of the host are encapsulated by vascular endothelial cells (VECs), the first step in the migration of the egg from the blood stream into the lumen of the gut and eventual exit from the body. The biomechanics associated with encapsulation and extravasation of the egg are poorly understood. We demonstrate that S. mansoni eggs induce VECs to form two types of membrane extensions during encapsulation; filopodia that probe eggshell surfaces and intercellular nanotubes that presumably facilitate VEC communication. Encapsulation efficiency, the number of filopodia and intercellular nanotubes, and the length of these structures depend on the egg’s vitality and, to a lesser degree, its maturation state. During encapsulation, live eggs induce VEC contractility and membranous structures formation in a Rho/ROCK pathway-dependent manner. Using elastic hydrogels embedded with fluorescent microbeads as substrates to culture VECs, live eggs induce VECs to exert significantly greater contractile forces during encapsulation than dead eggs, which leads to 3D deformations on both the VEC monolayer and the flexible substrate underneath. These significant mechanical deformations cause the VEC monolayer tension to fluctuate with the eventual rupture of VEC junctions, thus facilitating egg transit out of the blood vessel. Overall, our data on the mechanical interplay between host VECs and the schistosome egg improve our understanding of how this parasite manipulates its immediate environment to maintain disease transmission. Author summary Schistosomiasis, which infects over 200 million people, is a painful disease of poverty that is caused by inflammatory responses to the Schistosoma blood fluke’s eggs. To continue the parasite’s life cycle, eggs must escape the blood vessels and migrate through tissues of the host to the alimentary canal for exit into the environment. The biomechanical processes that help the immobile eggs to cross the blood vessel’s vascular endothelial cells (VECs) as the first step in this migration are not understood. We found that live but not dead eggs induce VECs to crawl over and encapsulate them. VECs in contact with live eggs make membranous extensions (filopodia) to explore the egg’s surface and also form long intercellular nanotubes to communicate with neighboring cells. VECs stimulate particular (Rho/ROCK) biochemical pathways to increase cell contractility and the forces generated are large enough to eventually break the junctions between cells and allow passage of the eggs into the underlying tissue. Our findings show how schistosome eggs activate and interact with VECs to initiate their escape from the bloodstream.
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- 2022
9. A Broad Spectrum Antiparasitic Activity of Organotin (IV) Derivatives and Its Untargeted Proteomic Profiling Using Leishmania donovani
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Obaid Hayat, Nazif Ullah, Muhammad Sirajuddin, Miriam A. Giardini, Jennifer V. Nguyen, Karol R. Francisco, Lawrence J. Liu, Yujie Uli Sun, Svetlana Maurya, Dominic McGrosso, David J. Gonzalez, Conor R. Caffrey, Anjan Debnath, and Jair L. Siqueira-Neto
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organotin (IV) compounds ,antiparasitic activity ,neglected tropical diseases ,drug discovery ,Medicine - Abstract
Metals have been used in medicine since ancient times for the treatment of different ailments with various elements such as iron, gold and arsenic. Metal complexes have also been reported to show antibiotic and antiparasitic activity. In this context, we tested the antiparasitic potential of 10 organotin (IV) derivatives from 4-(4-methoxyphenylamino)-4 oxobutanoic acid (MS26) against seven eukaryotic pathogens of medical importance: Leishmania donovani, Trypanosoma cruzi, Trypanosoma brucei, Entamoeba histolytica, Giardia lamblia, Naegleria fowleri and Schistosoma mansoni. Among the compounds with and without antiparasitic activity, compound MS26Et3 stood out with a 50% effective concentration (EC50) of 0.21 and 0.19 µM against promastigotes and intracellular amastigotes of L. donovani, respectively, 0.24 µM against intracellular amastigotes of T. cruzi, 0.09 µM against T. brucei, 1.4 µM against N. fowleri and impaired adult S. mansoni viability at 1.25 µM. In terms of host/pathogen selectivity, MS26Et3 demonstrated relatively mild cytotoxicity toward host cells with a 50% viability concentration of 4.87 µM against B10R cells (mouse monocyte cell line), 2.79 µM against C2C12 cells (mouse myoblast cell line) and 1.24 µM against HEK923 cells (human embryonic kidney cell line). The selectivity index supports this molecule as a therapeutic starting point for a broad spectrum antiparasitic alternative. Proteomic analysis of host cells infected with L. donovani after exposure to MS26Et3 showed a reduced expression of Rab7, which may affect the fusion of the endosome with the lysosome, and, consequently, impairing the differentiation of L. donovani to the amastigote form. Future studies to investigate the molecular target(s) and mechanism of action of MS26Et3 will support its chemical optimization.
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- 2022
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10. Multi-center screening of the Pathogen Box collection for schistosomiasis drug discovery
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Martina Maccesi, Pedro H. N. Aguiar, Valérian Pasche, Melody Padilla, Brian M. Suzuki, Sandro Montefusco, Ruben Abagyan, Jennifer Keiser, Marina M. Mourão, and Conor R. Caffrey
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Schistosoma ,Schistosomiasis ,Drug discovery ,Phenotypic screen ,Pathogen Box ,MMV ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Over the past five years, as a public service to encourage and accelerate drug discovery for diseases of poverty, the Medicines for Malaria Venture (MMV) has released box sets of 400 compounds named the Malaria, Pathogen and Stasis Boxes. Here, we screened the Pathogen Box against the post-infective larvae (schistosomula) of Schistosoma mansoni using assays particular to the three contributing institutions, namely, the University of California San Diego (UCSD) in the USA, the Swiss Tropical and Public Health Institute (Swiss TPH) in Switzerland, and the Fundação Oswaldo Cruz (FIOCRUZ) in Brazil. With the same set of compounds, the goal was to determine the degree of inter-assay variability and identify a core set of active compounds common to all three assays. New drugs for schistosomiasis would be welcome given that current treatment and control strategies rely on chemotherapy with just one drug, praziquantel. Methods Both the UCSD and Swiss TPH assays utilize daily observational scoring methodologies over 72 h, whereas the FIOCRUZ assay employs XTT (2,3-bis(2-methoxy-4-nitro-5-sulfophenyl)-5-[(phenylamino)carbonyl]-2H-tetrazolium hydroxide) at 72 h to measure viability as a function of NAD+/NADH redox state. Raw and transformed data arising from each assay were assembled for comparative analysis. Results For the UCSD and Swiss TPH assays, there was strong concordance of at least 87% in identifying active and inactive compounds on one or more of the three days. When all three assays were compared at 72 h, concordance remained a robust 74%. Further, robust Pearsonʼs correlations (0.48–0.68) were measured between the assays. Of those actives at 72 h, the UCSD, Swiss TPH and FIOCRUZ assays identified 86, 103 and 66 compounds, respectively, of which 35 were common. Assay idiosyncrasies included the identification of unique compounds, the differential ability to identify known antischistosomal compounds and the concept that compounds of interest might include those that increase metabolic activity above baseline. Conclusions The inter-assay data generated were in good agreement, including with previously reported data. A common set of antischistosomal molecules for further exploration has been identified.
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- 2019
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11. Molecular characterization and functional analysis of the Schistosoma mekongi Ca2+-dependent cysteine protease (calpain)
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Salisa Chaimon, Yanin Limpanont, Onrapak Reamtong, Sumate Ampawong, Orawan Phuphisut, Phiraphol Chusongsang, Jiraporn Ruangsittichai, Usa Boonyuen, Dorn Watthanakulpanich, Anthony J. O’Donoghue, Conor R. Caffrey, and Poom Adisakwattana
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Schistosoma mekongi ,Schistosomiasis ,Calcium-dependent cysteine protease ,Calpain ,Drug and vaccine development ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Schistosoma mekongi, which causes schistosomiasis in humans, is an important public health issue in Southeast Asia. Treatment with praziquantel is the primary method of control but emergence of praziquantel resistance requires the development of alternative drugs and vaccines. Calcium-dependent cysteine protease (calpain) is a novel vaccine candidate that has been studied in S. mansoni, S. japonicum, and protozoans including malaria, leishmania and trypanosomes. However, limited information is available on the properties and functions of calpain in other Schistosoma spp., including S. mekongi. In this study, we functionally characterized calpain 1 of S. mekongi (SmeCalp1). Results Calpain 1 of S. mekongi was obtained from transcriptomic analysis of S. mekongi; it had the highest expression level of all isoforms tested and was predominantly expressed in the adult male. SmeCalp1 cDNA is 2274 bp long and encodes 758 amino acids, with 85% to 90% homology with calpains in other Schistosoma species. Recombinant SmeCalp1 (rSmeCalp1), with a molecular weight of approximately 86.7 kDa, was expressed in bacteria and stimulated a marked antibody response in mice. Native SmeCalp1 was detected in crude worm extract and excretory-secretory product, and it was mainly localized in the tegument of the adult male; less signal was detected in the adult female worm. Thus, SmeCalp1 may play a role in surface membrane synthesis or host–parasite interaction. We assessed the protease activity of rSmeCalp1 and demonstrated that rSmeCalp1 could cleave the calpain substrate N-succinyl-Leu-Leu-Val-Tyr-7-amino-4-methylcoumarin, that was inhibited by calpain inhibitors (MDL28170 and E64c). Additionally, rSmeCalp1 could degrade the biological substrates fibronectin (blood clotting protein) and human complement C3, indicating important roles in the intravascular system and in host immune evasion. Conclusions SmeCalp1 is expressed on the tegumental surface of the parasite and can cleave host defense molecules; thus, it might participate in growth, development and survival during the entire life-cycle of S. mekongi. Information on the properties and functions of SmeCalp1 reported herein will be advantageous in the development of effective drugs and vaccines against S. mekongi and other schistosomes.
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- 2019
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12. Isoforms of Cathepsin B1 in Neurotropic Schistosomula of Trichobilharzia regenti Differ in Substrate Preferences and a Highly Expressed Catalytically Inactive Paralog Binds Cystatin
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Hana Dvořáková, Roman Leontovyč, Tomáš Macháček, Anthony J. O'Donoghue, Ondřej Šedo, Zbyněk Zdráhal, Charles S. Craik, Conor R. Caffrey, Petr Horák, and Libor Mikeš
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peptidase ,cathepsin B ,processing ,substrate specificity ,occluding loop ,cystatin ,Microbiology ,QR1-502 - Abstract
Schistosomula (the post-infective stages) of the neurotropic schistosome Trichobilharzia regenti possess multiple isoforms of cathepsin B1 peptidase (TrCB1.1-TrCB1.6) with involvement in nutrient digestion. The comparison of substrate preferences of TrCB1.1 and TrCB1.4 showed that TrCB1.4 had a very narrow substrate specificity and after processing it was less effective toward protein substrates when compared to TrCB1.1. Self-processing of both isoforms could be facilitated by sulfated polysaccharides due to a specific binding motif in the pro-sequence. Trans-activation by heterologous enzymes was also successfully employed. Expression profiling revealed a high level of transcription of genes encoding the enzymatically inactive paralogs TrCB1.5 and TrCB1.6. The transcription level of TrCB1.6 was comparable with that of TrCB1.1 and TrCB1.2, the most abundant active isoforms. Recombinant TrCB1.6wt, a wild type paralog with a Cys29-to-Gly substitution in the active site that renders the enzyme inactive, was processed by the active TrCB1 forms and by an asparaginyl endopeptidase. Although TrCB1.6wt lacked hydrolytic activity, endopeptidase, but not dipeptidase, activity could be restored by mutating Gly29 to Cys29. The lack of exopeptidase activity may be due to other mutations, such as His110-to-Asn in the occluding loop and Asp224-to-Gly in the main body of the mature TrCB1.6, which do not occur in the active isoforms TrCB1.1 and TrCB1.4 with exopeptidase activity. The catalytically active enzymes and the inactive TrCB1.6 paralog formed complexes with chicken cystatin, thus supporting experimentally the hypothesis that inactive paralogs could potentially regulate the activity of the active forms or protect them from being inhibited by host inhibitors. The effect on cell viability and nitric oxide production by selected immune cells observed for TrCB1.1 was not confirmed for TrCB1.6. We show here that the active isoforms of TrCB1 have different affinities for peptide substrates thereby facilitating diversity in protein-derived nutrition for the parasite. The inactive paralogs are unexpectedly highly expressed and one of them retains the ability to bind cystatins, likely due to specific mutations in the occluding loop and the enzyme body. This suggests a role in sequestration of inhibitors and protection of active cysteine peptidases.
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- 2020
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13. TPT sulfonate, a single, oral dose schistosomicidal prodrug: In vivo efficacy, disposition and metabolic profiling
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Alan R. Wolfe, R. Jeffrey Neitz, Mark Burlingame, Brian M. Suzuki, KC Lim, Mark Scheideler, David L. Nelson, Leslie Z. Benet, and Conor R. Caffrey
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Infectious and parasitic diseases ,RC109-216 - Abstract
Treatment of schistosomiasis relies precariously on just one drug, praziquantel (PZQ). In the search for alternatives, 15 S-[2-(alkylamino)alkane] thiosulfuric acids were obtained from a previous research program and profiled in mice for efficacy against both mature (>42-day-old) and juvenile (21-day-old) Schistosoma mansoni using a screening dose of 100 mg/kg PO QDx4. One compound, S-[2-(tert-butylamino)-1-phenylethane] thiosulfuric acid (TPT sulfonate), was the most effective by decreasing female and male worm burdens by ≥ 90% and ≥46% (mature), and ≥89% and ≥79% (juvenile), respectively. In contrast, PZQ decreased mature female and male worm burdens by 95% and 94%, respectively, but was ineffective against juvenile stages. Against 7-day-old lung-stage worms, TPT sulfonate was only effective at twice the dose decreasing female and male burdens by 95 and 80%, respectively. Single oral doses at 400 and/or 600 mg/kg across various developmental time-points (1-, 7-, 15-, 21- and/or 42 day-old) were consistent with the QD x4 data; efficacy was strongest once the parasites had completed lung migration, and female and male burdens were decreased by at least 90% and 80%, respectively. In vitro, TPT sulfonate is inactive against the parasite suggesting a pro-drug mechanism of action. In mice, TPT sulfonate is fully absorbed and subject to rapid, non-CYP-mediated, first-pass metabolism that is initiated by desulfation and yields a series of metabolites. The initially-formed free thiol-containing metabolite, termed TP thiol, was chemically synthesized; it dose-dependently decreased S. mansoni and Schistosoma haematobium motility in vitro. Also, when administered as a single 50 mg/kg IP dose, TP thiol decreased 33-day-old S. mansoni female and male burdens by 35% and 44%, with less severe organomegaly. Overall, TPT sulfonate's efficacy profile is competitive with that of PZQ. Also, the characterization of a parasiticidal metabolite facilitates an understanding and improvement of the chemistry, and identification of the mechanism of action and/or target. Keywords: Schistosomiasis, Schistosoma, Anthelmintic, Alkylaminoalkanethiosulfuric acid, Drug metabolism, Drug disposition
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- 2018
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14. Bioactivity of Farnesyltransferase Inhibitors Against Entamoeba histolytica and Schistosoma mansoni
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Alexandra Probst, Thi N. Nguyen, Nelly El-Sakkary, Danielle Skinner, Brian M. Suzuki, Frederick S. Buckner, Michael H. Gelb, Conor R. Caffrey, and Anjan Debnath
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Entamoeba histolytica ,Schistosoma mansoni ,farnesyltransferase ,metronidazole ,lonafarnib ,tipifarnib ,Microbiology ,QR1-502 - Abstract
The protozoan parasite Entamoeba histolytica can induce amebic colitis and amebic liver abscess. First-line drugs for the treatment of amebiasis are nitroimidazoles, particularly metronidazole. Metronidazole has side effects and potential drug resistance is a concern. Schistosomiasis, a chronic and painful infection, is caused by various species of the Schistosoma flatworm. There is only one partially effective drug, praziquantel, a worrisome situation should drug resistance emerge. As many essential metabolic pathways and enzymes are shared between eukaryotic organisms, it is possible to conceive of small molecule interventions that target more than one organism or target, particularly when chemical matter is already available. Farnesyltransferase (FT), the last common enzyme for products derived from the mevalonate pathway, is vital for diverse functions, including cell differentiation and growth. Both E. histolytica and Schistosoma mansoni genomes encode FT genes. In this study, we phenotypically screened E. histolytica and S. mansoni in vitro with the established FT inhibitors, lonafarnib and tipifarnib, and with 125 tipifarnib analogs previously screened against both the whole organism and/or the FT of Trypanosoma brucei and Trypanosoma cruzi. For E. histolytica, we also explored whether synergy arises by combining lonafarnib and metronidazole or lonafarnib with statins that modulate protein prenylation. We demonstrate the anti-amebic and anti-schistosomal activities of lonafarnib and tipifarnib, and identify 17 tipifarnib analogs with more than 75% growth inhibition at 50 μM against E. histolytica. Apart from five analogs of tipifarnib exhibiting activity against both E. histolytica and S. mansoni, 10 additional analogs demonstrated anti-schistosomal activity (severe degenerative changes at 10 μM after 24 h). Analysis of the structure-activity relationship available for the T. brucei FT suggests that FT may not be the relevant target in E. histolytica and S. mansoni. For E. histolytica, combination of metronidazole and lonafarnib resulted in synergism for growth inhibition. Also, of a number of statins tested, simvastatin exhibited moderate anti-amebic activity which, when combined with lonafarnib, resulted in slight synergism. Even in the absence of a definitive molecular target, identification of potent anti-parasitic tipifarnib analogs encourages further exploration while the synergistic combination of metronidazole and lonafarnib offers a promising treatment strategy for amebiasis.
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- 2019
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15. Correction to: Understanding the key processes of excellence as a prerequisite to establishing academic centres of excellence in Africa
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Abebaw Fekadu, Claire Oppenheim, Tsegahun Manyazewal, Corey Nislow, Yimtubezinash Woldeamanuel, Asrat Hailu, Anteneh Belete, Dawit Wondimagegn, Charlotte Hanlon, Tsige Gebremariam, Asha Collins, Christopher J. Larson, Wondwossen Gebreyes, Eleni Aklilu, Adamson S. Muula, Sabina Mugus, Conor R. Caffrey, Mirutse Giday, Getnet Yimer, Gail Davey, Girmay Medhin, and Eyasu Makonnen
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Special aspects of education ,LC8-6691 ,Medicine - Abstract
An amendment to this paper has been published and can be accessed via the original article.
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- 2021
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16. Author Correction: Caenorhabditis elegans is a useful model for anthelmintic discovery
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Andrew R. Burns, Genna M. Luciani, Gabriel Musso, Rachel Bagg, May Yeo, Yuqian Zhang, Luckshi Rajendran, John Glavin, Robert Hunter, Elizabeth Redman, Susan Stasiuk, Michael Schertzberg, G. Angus McQuibban, Conor R. Caffrey, Sean R. Cutler, Mike Tyers, Guri Giaever, Corey Nislow, Andy G. Fraser, Calum A. MacRae, John Gilleard, and Peter J. Roy
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Science - Abstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
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- 2020
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17. Synthesis and Bioactivity of Phthalimide Analogs as Potential Drugs to Treat Schistosomiasis, a Neglected Disease of Poverty
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Snigdha Singh, Nelly El-Sakkary, Danielle E. Skinner, Prem Prakash Sharma, Sabine Ottilie, Yevgeniya Antonova-Koch, Prashant Kumar, Elizabeth Winzeler, Poonam, Conor R. Caffrey, and Brijesh Rathi
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phthalimide ,benzimidazole ,schistosoma ,click chemistry ,anti-schistosomal activity ,tropical disease ,drug discovery ,Medicine ,Pharmacy and materia medica ,RS1-441 - Abstract
The neglected tropical disease, schistosomiasis, is caused by trematode blood flukes of the Schistosoma genus and infects approximately 200 million people worldwide. With just one partially effective drug available for disease treatment, new drugs are urgently needed. Herein, a series of 47 phthalimide (Pht) analogues possessing high-value bioactive scaffolds (i.e., benzimidazole and 1,2,3,-triazoles) was synthesized by click-chemistry. Compounds were evaluated for anti-schistosomal activity in culture against somules (post-infective larvae) and adults of Schistosoma mansoni, their predicted ADME (absorption, distribution, metabolism, and excretion) properties, and toxicity vs. HepG2 cells. The majority showed favorable parameters for surface area, lipophilicity, bioavailability and Lipinski score. Thirteen compounds were active at 10 µM against both somules and adults (6d, 6f, 6i−6l, 6n−6p, 6s, 6r’, 6t’ and 6w). Against somules, the majority caused degeneracy and/or death after 72 h; whereas against adult parasites, five compounds (6l, 6d, 6f, 6r’ and 6s) elicited degeneracy, tegumental (surface) damage and/or death. Strongest potency against both developmental stages was recorded for compounds possessing n-butyl or isobutyl as a linker, and a pentafluorophenyl group on triazole. Apart from five compounds for which anti-parasite activity tracked with toxicity to HepG2 cells, there was apparently no toxicity to HepG2 cells (EC50 values ≥50 µM). The data overall suggest that phthaloyl-triazole compounds are favorable synthons for additional studies as anti-schistosomals.
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- 2020
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18. Octopamine signaling in the metazoan pathogen Schistosoma mansoni: localization, small-molecule screening and opportunities for drug development
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Nelly El-Sakkary, Steven Chen, Michelle R. Arkin, Conor R. Caffrey, and Paula Ribeiro
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Schistosoma mansoni ,Synapsin ,Nervous system ,Biogenic amine ,Neuromuscular ,Octopamine ,Dopamine ,Drug discovery ,Medicine ,Pathology ,RB1-214 - Abstract
Schistosomiasis is a tropical disease caused by a flatworm trematode parasite that infects over 200 million people worldwide. Treatment and control of the disease rely on just one drug, praziquantel. The possibility of drug resistance coupled with praziquantel's variable efficacy encourages the identification of new drugs and drug targets. Disruption of neuromuscular homeostasis in parasitic worms is a validated strategy for drug development. In schistosomes, however, much remains to be understood about the organization of the nervous system, its component neurotransmitters and potential for drug discovery. Using synapsin as a neuronal marker, we map the central and peripheral nervous systems in the Schistosoma mansoni adult and schistosomulum (post-infective larva). We discover the widespread presence of octopamine (OA), a tyrosine-derived and invertebrate-specific neurotransmitter involved in neuromuscular coordination. OA labeling facilitated the discovery of two pairs of ganglia in the brain of the adult schistosome, rather than the one pair thus far reported for this and other trematodes. In quantitative phenotypic assays, OA and the structurally related tyrosine-derived phenolamine and catecholamine neurotransmitters differentially modulated schistosomulum motility and length. Similarly, from a screen of 28 drug agonists and antagonists of tyrosine-derivative signaling, certain drugs that act on OA and dopamine receptors induced robust and sometimes complex concentration-dependent effects on schistosome motility and length; in some cases, these effects occurred at concentrations achievable in vivo. The present data advance our knowledge of the organization of the nervous system in this globally important pathogen and identify a number of drugs that interfere with tyrosine-derivative signaling, one or more of which might provide the basis for a new chemotherapeutic approach to treat schistosomiasis. This article has an associated First Person interview with the first author of the paper.
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- 2018
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19. Substrate Specificity of Cysteine Proteases Beyond the S2 Pocket: Mutagenesis and Molecular Dynamics Investigation of Fasciola hepatica Cathepsins L
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Ileana Corvo, Florencia Ferraro, Alicia Merlino, Kathrin Zuberbühler, Anthony J. O'Donoghue, Lucía Pastro, Natalia Pi-Denis, Tatiana Basika, Leda Roche, James H. McKerrow, Charles S. Craik, Conor R. Caffrey, and José F. Tort
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Fasciola hepatica ,cathepsin L ,active site conformation ,S2 pocket ,mutagenesis ,molecular dynamics simulation ,Biology (General) ,QH301-705.5 - Abstract
Cysteine proteases are widespread in all life kingdoms, being central to diverse physiological processes based on a broad range of substrate specificity. Paralogous Fasciola hepatica cathepsin L proteases are essential to parasite invasion, tissue migration and reproduction. In spite of similarities in their overall sequence and structure, these enzymes often exhibit different substrate specificity. These preferences are principally determined by the amino acid composition of the active site's S2 subsite (pocket) of the enzyme that interacts with the substrate P2 residue (Schetcher and Berger nomenclature). Although secreted FhCL1 accommodates aliphatic residues in the S2 pocket, FhCL2 is also efficient in cleaving proline in that position. To understand these differences, we engineered the FhCL1 S2 subsite at three amino acid positions to render it identical to that present in FhCL2. The substitutions did not produce the expected increment in proline accommodation in P2. Rather, they decreased the enzyme's catalytic efficiency toward synthetic peptides. Nonetheless, a change in the P3 specificity was associated with the mutation of Leu67 to Tyr, a hinge residue between the S2 and S3 subsites that contributes to the accommodation of Gly in S3. Molecular dynamic simulations highlighted changes in the spatial distribution and secondary structure of the S2 and S3 pockets of the mutant FhCL1 enzymes. The reduced affinity and catalytic efficiency of the mutant enzymes may be due to a narrowing of the active site cleft that hinders the accommodation of substrates. Because the variations in the enzymatic activity measured could not be exclusively allocated to those residues lining the active site, other more external positions might modulate enzyme conformation, and, therefore, catalytic activity.
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- 2018
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20. Effect of Phenotypic Screening of Extracts and Fractions of Erythrophleum ivorense Leaf and Stem Bark on Immature and Adult Stages of Schistosoma mansoni
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Gertrude Kyere-Davies, Christian Agyare, Yaw Duah Boakye, Brian M. Suzuki, and Conor R. Caffrey
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Infectious and parasitic diseases ,RC109-216 - Abstract
Schistosomiasis is a disease caused by a flatworm parasite that infects people in tropical and subtropical regions of Sub-Saharan Africa, South America, China, and Southeast Asia. The reliance on just one drug for current treatment emphasizes the need for new chemotherapeutic strategies. The aim of this study was to determine the phenotypic effects of extracts and fractions of leaf and stem bark of Erythrophleum ivorense (family Euphorbiaceae), a tree that grows in tropical parts of Africa, on two developmental stages of Schistosoma mansoni, namely, postinfective larvae (schistosomula or somules) and adults. Methanol leaf and stem bark extracts of E. ivorense were successively fractionated with acetone, petroleum ether, ethyl acetate, and methanol. These fractions were then incubated with somules at 0.3125 to 100 μg/mL and with adults at 1.25 μg/mL. The acetone fractions of both the methanol leaf and bark of E. ivorense were most active against the somules whereas the petroleum ether fractions showed least activity. For adult parasites, the acetone fraction of methanol bark extract also elicited phenotypic changes. The data arising provide the first step in the discovery of new treatments for an endemic infectious disease using locally sourced African medicinal plants.
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- 2018
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21. Anti-Schistosomal Activity of Cinnamic Acid Esters: Eugenyl and Thymyl Cinnamate Induce Cytoplasmic Vacuoles and Death in Schistosomula of Schistosoma mansoni
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Jan Glaser, Uta Schurigt, Brian M. Suzuki, Conor R. Caffrey, and Ulrike Holzgrabe
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Schistosoma ,schistosomula ,parasite ,eugenyl cinnamate ,thymyl cinnamate ,vacuoles ,autophagy ,anti-schistosomal activity ,Organic chemistry ,QD241-441 - Abstract
Bornyl caffeate (1) was previously isolated by us from Valeriana (V.) wallichii rhizomes and identified as an anti-leishmanial substance. Here, we screened a small compound library of synthesized derivatives 1–30 for activity against schistosomula of Schistosoma (S.) mansoni. Compound 1 did not show any anti-schistosomal activity. However, strong phenotypic changes, including the formation of vacuoles, degeneration and death were observed after in vitro treatment with compounds 23 (thymyl cinnamate) and 27 (eugenyl cinnamate). Electron microscopy analysis of the induced vacuoles in the dying parasites suggests that 23 and 27 interfere with autophagy.
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- 2015
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22. Serum albumin and α-1 acid glycoprotein impede the killing of Schistosoma mansoni by the tyrosine kinase inhibitor Imatinib
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Svenja Beckmann, Thavy Long, Christina Scheld, Rudolf Geyer, Conor R. Caffrey, and Christoph G. Grevelding
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Schistosoma mansoni ,Protein tyrosine kinase (PTK) ,Abl tyrosine kinase (Abl) ,Imatinib (Gleevec, Glivec, STI-571) ,In vitro culture ,Serum albumin (SA) ,α-1 acidic glycoprotein (AGP) ,Erythromycin ,Infectious and parasitic diseases ,RC109-216 - Abstract
In the search for new drugs and drug targets to treat the flatworm disease schistosomiasis, protein kinases (PKs) have come under particular scrutiny because of their essential roles in developmental and physiological processes in schistosome parasites. In this context the application of the anti-cancer Abl tyrosine kinase (TK) inhibitor Imatinib (Gleevec/Glivec; STI-571) to adult Schistosoma mansoni in vitro has indicated negative effects on diverse physiological processes including survival. Motivated by these in vitro findings, we performed in vivo experiments in rodent models of S. mansoni infection. Unexpectedly, Imatinib had no effect on worm burden or egg-production. We found that the blood components serum albumin (SA) and alpha-1 acid glycoprotein (AGP or orosomucoid) negated Imatinib’s deleterious effects on adult S. mansoni and schistosomula (post-infective larvae) in vitro. This negative effect was partially reversed by erythromycin. AGP synthesis can increase as a consequence of inflammatory processes or infection; in addition upon infection AGP levels are 6–8 times higher in mice compared to humans. Therefore, mice and probably other rodents are poor infection models for measuring the effects of Imatinib in vivo. Accordingly, we suggest the routine evaluation of the ability of AGP and SA to block in vitro anti-schistosomal effects of small molecules like Imatinib prior to laborious and expensive animal experiments.
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- 2014
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23. Anthelmintics: From discovery to resistance II (San Diego, 2016)
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Richard J. Martin, Adrian J. Wolstenholme, and Conor R. Caffrey
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Anthelmintics ,Resistance ,Drug discovery ,Scientific meeting ,San Diego ,Infectious and parasitic diseases ,RC109-216 - Abstract
The second scientific meeting in the series: “Anthelmintics: From Discovery to Resistance” was held in San Diego in February, 2016. The focus topics of the meeting, related to anthelmintic discovery and resistance, were novel technologies, bioinformatics, commercial interests, anthelmintic modes of action and anthelmintic resistance. Basic scientific, human and veterinary interests were addressed in oral and poster presentations. The delegates were from universities and industries in the US, Europe, Australia and New Zealand. The papers were a great representation of the field, and included the use of C. elegans for lead discovery, mechanisms of anthelmintic resistance, nematode neuropeptides, proteases, B. thuringiensis crystal protein, nicotinic receptors, emodepside, benzimidazoles, P-glycoproteins, natural products, microfluidic techniques and bioinformatics approaches. The NIH also presented NIAID-specific parasite genomic priorities and initiatives. From these papers we introduce below selected papers with a focus on anthelmintic drug screening and development.
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- 2016
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24. Odanacatib, a Cathepsin K Cysteine Protease Inhibitor, Kills Hookworm In Vivo
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Jon J. Vermeire, Brian M. Suzuki, and Conor R. Caffrey
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parasite ,hookworm ,soil-transmitted helminth ,cysteine protease ,K11777 ,odanacatib ,Merck ,anthelmintic ,Medicine ,Pharmacy and materia medica ,RS1-441 - Abstract
Hookworm infection is chief among soil-transmitted helminthiases (STHs) for the chronic morbidly inflicted. Deworming via mass drug administration (MDA) programs most often employs single doses of benzimidazole drugs to which resistance is a constant threat. To discover new drugs, we employ a hamster model of hookworm infection with Ancylostoma ceylanicum and use albendazole (ABZ; 10 mg/kg orally) as the gold standard therapy. We previously showed that a single oral 100 mg/kg dose of the cathepsin cysteine protease (CP) inhibitor, K11777, offers near cure of infection that is associated with a 95% reduction in the parasite’s resident CP activity. We confirm these findings here and demonstrate that odanacatib (ODN), Merck’s cathepsin K inhibitor and post-clinical Phase III drug candidate for treatment of osteoporosis, decreases worm burden by 73% at the same dose with a 51% reduction in the parasite’s CP activity. Unlike K11777, ODN is a modest inhibitor of both mammalian cathepsin B and the predominant cathepsin B-like activity measureable in hookworm extracts. ODN’s somewhat unexpected efficacy, therefore, may be due to its excellent pharmacokinetic (PK) profile which allows for sustained plasma exposure and, possibly, sufficient perturbation of hookworm cathepsin B activity to be detrimental to survival. Accordingly, identifying a CP inhibitor(s) that combines the inhibition potency of K11777 and the PK attributes of ODN could lead to a drug that is effective at a lower dose. Achieving this would potentially provide an alternative or back-up to the current anti-hookworm drug, albendazole.
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- 2016
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25. Perspective on Schistosomiasis Drug Discovery: Highlights from a Schistosomiasis Drug Discovery Workshop at Wellcome Collection, London, September 2022
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Nicola Caldwell, Rana Afshar, Beatriz Baragaña, Amaya L. Bustinduy, Conor R. Caffrey, James J. Collins, Daniela Fusco, Amadou Garba, Mark Gardner, Mireille Gomes, Karl F. Hoffmann, Michael Hsieh, Nathan C. Lo, Case W. McNamara, Justin Komguep Nono, Gilda Padalino, Kevin D. Read, Meta Roestenberg, Thomas Spangenberg, Sabine Specht, and Ian H. Gilbert
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Infectious Diseases - Published
- 2023
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26. Algorithmic Mapping and Characterization of the Drug-Induced Phenotypic-Response Space of Parasites Causing Schistosomiasis.
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Rahul Singh, Rachel Beasley, Thavy Long, and Conor R. Caffrey
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- 2018
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27. Identification of Inhibitors of the Schistosoma mansoni VKR2 Kinase Domain
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Indran Mathavan, Lawrence J. Liu, Sean W. Robinson, Nelly El-Sakkary, Adam Jo J. Elatico, Darwin Gomez, Ricky Nellas, Raymond J. Owens, William Zuercher, Iva Navratilova, Conor R. Caffrey, Konstantinos Beis, and Medical Research Council
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crystal structure ,Science & Technology ,0304 Medicinal and Biomolecular Chemistry ,Organic Chemistry ,HIV ,Chemistry, Medicinal ,0305 Organic Chemistry ,Biochemistry ,inhibitor ,inhibition of autophosphorylation ,schistosomiasis ,docking ,Drug Discovery ,Schistosoma ,Pharmacology & Pharmacy ,GENITAL SCHISTOSOMIASIS ,PRAZIQUANTEL ,1115 Pharmacology and Pharmaceutical Sciences ,Life Sciences & Biomedicine ,kinase domain - Abstract
Schistosomiasis is a neglected tropical disease caused by parasitic flatworms. Current treatment relies on just one partially effective drug, praziquantel (PZQ). Schistosoma mansoni Venus Kinase Receptors 1 and 2 (SmVKR1 and SmVKR2) are important for parasite growth and egg production, and are potential targets for combating schistosomiasis. VKRs consist of an extracellular Venus Flytrap Module (VFTM) linked via a transmembrane helix to a kinase domain. Here, we initiated a drug discovery effort to inhibit the activity of the SmVKR2 kinase domain (SmVKR2KD) by screening the GSK published kinase inhibitor set 2 (PKIS2). We identified several inhibitors, of which four were able to inhibit its enzymatic activity and induced phenotypic changes in ex vivoS. mansoni. Our crystal structure of the SmVKR2KD displays an active-like state that sheds light on the activation process of VKRs. Our data provide a basis for the further exploration of SmVKR2 as a possible drug target.
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- 2022
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28. Brain Microvascular Transcriptional Responses to African Trypanosomes Under Physiologic Flow
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Pathology (PAT), SOM, Dennis Grab, Nur Atiqah Azhar, Mohammad Asif Khan, Brandon J. Sumpio, Yongqing Zhang, Kevin G. Becker, Carlos Pardo-Villamizar, Koichiro Mihara, Morley Hollenberg, Conor R. Caffrey, H. Benjamin Larman, Andrew Wong, Peter Searson, Peter G. E. Kennedy, Serap Aksoy, Bauer E.Sumpio, Pathology (PAT), SOM, Dennis Grab, and Nur Atiqah Azhar, Mohammad Asif Khan, Brandon J. Sumpio, Yongqing Zhang, Kevin G. Becker, Carlos Pardo-Villamizar, Koichiro Mihara, Morley Hollenberg, Conor R. Caffrey, H. Benjamin Larman, Andrew Wong, Peter Searson, Peter G. E. Kennedy, Serap Aksoy, Bauer E.Sumpio
- Abstract
Breakout Session: Mental Health and Traumatic Brain Injury Human Brain Microvascular Transcriptional Responses to African Trypanosomes Under Physiologic Flow. Dennis J Grab1, Nur Atiqah Azhar2, Mohammad Asif Khan2, Brandon J. Sumpio3, Yongqing Zhang4, Kevin G Becker4, Carlos Pardo-Villamizar5, Koichiro Mihara6, Morley Hollenberg6, Conor R. Caffrey7, H. Benjamin Larman5, Andrew Wong5, Peter Searson5, Peter G E Kennedy8, Serap Aksoy3, Bauer E.Sumpio3. 1] 1Uniformed Services University of the Health Sciences, Bethesda, MD, USA. 2Perdana University, Selangor, Malaysia. 3Yale University, New Haven, CT, USA. 4National Institute on Aging (NIH), Baltimore, Maryland USA. 5Johns Hopkins University, Baltimore, MD, USA. 6University of Calgary Cumming School of Medicine, Calgary, Canada. 7University of California San Diego, La Jolla, USA. 8University of Glasgow, Glasgow, Scotland, UK. Disclaimer: The opinions expressed herein are those of the author(s) and are not necessarily representative of those of the Uniformed Services University of the Health Sciences, the Department of Defense, or the United States Army, Navy, or Air Force. MHSRS-23-10694 INTRODUCTION: The African trypanosome, Trypanosoma brucei rhodesiense (Tbr), causes the acute East African variant of human African trypanosomiasis (HAT; sleeping sickness). Dissemination into the brain leads to neurologic involvement characterized by concomitant psychiatric disorders, seizures, night- time insomnia, and daytime drowsiness, progressive coma and, if untreated, death. How African trypanosomes alter the human blood-brain barrier (BBB) function to enter and/or disrupt brain homeostasis and cause central nervous system disease is of vital importance but not fully understood. Gold standard” static in vitro model systems (Transwell™ inserts and Electric Cell-Substrate Electric Impedance Sensing; ECIS) for BBB studies using shuman brain microvascular endothelial cells (MEC) show strong links between BBB dysfunction, pathogen cy, RITM0041103, INTRODUCTION: The African trypanosome, Trypanosoma brucei rhodesiense (Tbr), causes the acute East African variant of human African trypanosomiasis (HAT; sleeping sickness). Dissemination into the brain leads to neurologic involvement characterized by concomitant psychiatric disorders, seizures, night- time insomnia, and daytime drowsiness, progressive coma and, if untreated, death. How African trypanosomes alter the human blood-brain barrier (BBB) function to enter and/or disrupt brain homeostasis and cause central nervous system disease is of vital importance but not fully understood. Gold standard” static in vitro model systems (Transwell™ inserts and Electric Cell-Substrate Electric Impedance Sensing; ECIS) for BBB studies using shuman brain microvascular endothelial cells (MEC) show strong links between BBB dysfunction, pathogen cysteine proteases as major virulence factors (iTbCatL), host protease-activated receptors (PARs) and Ca2+ signaling (Fig 1; Refs 1-3). Infection-induced BMEC proinflammatory cytokine expression and gene-profiling identified pathways that predict G-protein modulation of BBB permeability. In human kidney embryonic cells, recombinant trypanosome cysteine protease TbCatL triggers biased MAPK signaling via PAR1, but not PAR2 and MAPK signaling by both PARs is triggered by other proteases present in trypanosome lysate preparations (Fig 2: unpbublished). The consequence of these events was predicted to be increased permeability of the BBB to parasite transmigration and the initiation of neuroinflammation, events precursory to CNS disease. These static BBB models provided important and predictive information about the early stages of CNS HAT predicting that the parasites would enter the brain of a mouse within hours after entering the bloodstream (Fig 3; Ref 4). However, these models do not address the contribution of brain blood flow dynamics (Ref 5).
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- 2023
29. Development of subunit selective substrates for Trichomonas vaginalis proteasome
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Pavla Fajtova, Brianna M Hurysz, Yukiko Miyamoto, Mateus Serafim, Zhenze Jiang, Diego F. Trujillo, Lawrence Liu, Urvashi Somani, Jehad Almaliti, Samuel A. Myers, Conor R. Caffrey, William H. Gerwick, Christopher J Kirk, Evzen Boura, Lars Eckmann, and Anthony J O’Donoghue
- Subjects
Article - Abstract
The protozoan parasite,Trichomonas vaginalis(Tv) causes trichomoniasis, the most common, non-viral, sexually transmitted infection in the world. Only two closely related drugs are approved for its treatment. The accelerating emergence of resistance to these drugs and lack of alternative treatment options poses an increasing threat to public health. There is an urgent need for novel effective anti-parasitic compounds. The proteasome is a critical enzyme forT. vaginalissurvival and was validated as a drug target to treat trichomoniasis. However, to develop potent inhibitors of theT. vaginalisproteasome, it is essential that we understand which subunits should be targeted. Previously, we identified two fluorogenic substrates that were cleaved byT. vaginalisproteasome, however after isolating the enzyme complex and performing an in-depth substrate specificity study, we have now designed three fluorogenic reporter substrates that are each specific for one catalytic subunit. We screened a library of peptide epoxyketone inhibitors against the live parasite and evaluated which subunits are targeted by the top hits. Together we show that targeting of the β5 subunit ofT. vaginalisis sufficient to kill the parasite, however, targeting of β5 plus either β1 or β2 results in improved potency.
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- 2023
30. Brazilian green propolis reduces worm burden and hepatic granuloma formation in a Schistosoma mansoni experimental murine model
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Lucas A. de L. Paula, Mário F. C. Santos, Mariana C. Pagotti, Rodrigo C. S. Veneziani, Jairo K. Bastos, Conor R. Caffrey, Sérgio R. Ambrósio, and Lizandra G. Magalhães
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Infectious Diseases ,General Veterinary ,Insect Science ,Parasitology ,General Medicine - Published
- 2022
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31. Structure-Activity Relationships, Tolerability and Efficacy of Microtubule-Active 1,2,4-Triazolo[1,5-a]pyrimidines as Potential Candidates to Treat Human African Trypanosomiasis
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Ludovica Monti, Lawrence J. Liu, Carmine Varricchio, Bobby Lucero, Thibault Alle, Wenqian Yang, Ido Bem-Shalom, Michael Gilson, Kurt R. Brunden, Andrea Brancale, Conor R. Caffrey, and Carlo Ballatore
- Subjects
Article - Abstract
Tubulin and microtubules (MTs) are potential protein targets to treat parasitic infections and our previous studies have shown that the triazolopyrimidine (TPD) class of MT- active compounds hold promise as antitrypanosomal agents. MT-targeting TPDs include structurally related but functionally diverse congeners that interact with mammalian tubulin at either one or two distinct interfacial binding sites; namely, the seventh and vinca sites, which are found within or between α,β-tubulin heterodimers, respectively. Evaluation of the activity of 123 TPD congeners against culturedTrypanosoma bruceienabled a robust quantitative structure-activity relationship (QSAR) model and the prioritization of two congeners forin vivopharmacokinetics (PK), tolerability and efficacy studies. Treatment ofT. brucei-infected mice with tolerable doses of TPDs3and4significantly decreased blood parasitemia within 24 h. Further, two once-weekly doses of4at 10 mg/kg significantly extended the survival of infected mice relative to infected animals treated with vehicle. Further optimization of dosing and/or the dosing schedule of these CNS-active TPDs may provide alternative treatments for human African trypanosomiasis.
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- 2023
32. Activity of N-phenylbenzamide analogs against the neglected disease pathogen, Schistosoma mansoni
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Masebe Kanyanta, Chilufya Lengwe, Dickson Mambwe, Karol R. Francisco, Lawrence J. Liu, Yujie Uli Sun, Dilini K. Amarasinghe, Conor R. Caffrey, and Peter Mubanga Cheuka
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Organic Chemistry ,Clinical Biochemistry ,Drug Discovery ,Pharmaceutical Science ,Molecular Medicine ,Molecular Biology ,Biochemistry ,Article - Abstract
For the Schistosoma mansoni flatworm pathogen, we report a structure–activity relationship of 25 derivatives of the N-phenylbenzamide compound, 1 (MMV687807), a Medicines for Malaria Venture compound for which bioactivity was originally identified in 2018. Synthesized compounds were cross-screened against the HEK 293 mammalian cells. Compounds 9 and 11 were identified as fast-acting schistosomicidal compounds whereby adult worm integrity was severely compromised within 1 h. Against HEK 293 mammalian cells, both compounds exhibited high CC(50) values (9.8 ± 1.6 and 11.1 ± 0.2 μM respectively) which could translate to comfortable selectivity. When evaluated in a concentration-response format, compound 9 was active in the nanomolar range (EC(50) = 80 nM), translating to a selectivity index of 123 over HEK 293 cells. The data encourage the further investigation of N-phenylbenzamides as antischistosomals.
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- 2023
33. Structure-Activity Relationship of Dibenzylideneacetone Analogs Against the Neglected Disease Pathogen, Trypanosoma brucei
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Karol R. Francisco, Ludovica Monti, Wenqian Yang, Hayoung Park, Lawrence J. Liu, Kaitlyn Watkins, Dilini K. Amarasinghe, Marianna Nalli, Carlos Roberto Polaquini, Luis O. Regasini, Antônio Eduardo Miller Crotti, Romano Silvestri, Lizandra Guidi Magalhães, and Conor R. Caffrey
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Organic Chemistry ,Clinical Biochemistry ,Drug Discovery ,Pharmaceutical Science ,Molecular Medicine ,Molecular Biology ,Biochemistry ,Article - Abstract
Trypanosoma brucei is a protozoan parasite that causes Human African Trypanosomiasis (HAT), a neglected tropical disease (NTD) that is endemic in 36 countries in sub-Saharan Africa. Only a handful drugs are available for treatment, and these have limitations, including toxicity and drug resistance. Using the natural product, curcumin, as a starting point, several curcuminoids and related analogs were evaluated against bloodstream forms of T. b. brucei. A particular subset of dibenzylideneacetone (DBA) compounds exhibited potent in vitro antitrypanosomal activity with sub-micromolar EC(50) values. A structure-activity relationship study including 26 DBA analogs was initiated, and several compounds exhibited EC(50) values as low as 200 nM. Cytotoxicity counter screens in HEK293 cells identified several compounds having selectivity indices above 10. These data suggest that DBAs offer starting points for a new small molecule therapy of HAT.
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- 2023
34. Microtubule-Stabilizing 1,2,4-Triazolo[1,5-a]pyrimidines as Candidate Therapeutics for Neurodegenerative Disease: Matched Molecular Pair Analyses and Computational Studies Reveal New Structure-Activity Insights
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Thibault Alle, Carmine Varricchio, Yuemang Yao, Bobby Lucero, Goodwell Nzou, Stefania Demuro, Megan Muench, Khoa D. Vuong, Killian Oukoloff, Anne-Sophie Cornec, Karol R. Francisco, Conor R. Caffrey, Virginia M.-Y. Lee, Amos B. Smith, Andrea Brancale, Kurt R. Brunden, and Carlo Ballatore
- Subjects
Aging ,Medicinal & Biomolecular Chemistry ,Organic Chemistry ,Neurosciences ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Neurodegenerative Diseases ,Pharmacology and Pharmaceutical Sciences ,Neurodegenerative ,Alzheimer's Disease ,Microtubules ,Brain Disorders ,Structure-Activity Relationship ,Medicinal and Biomolecular Chemistry ,Pyrimidines ,Alzheimer Disease ,Tubulin ,Drug Discovery ,Neurological ,Acquired Cognitive Impairment ,Molecular Medicine ,Humans ,Dementia - Abstract
Microtubule (MT)-stabilizing 1,2,4-triazolo[1,5-a]pyrimidines (TPDs) hold promise as candidate therapeutics for Alzheimer's disease (AD) and other neurodegenerative conditions. However, depending on the choice of substituents around the TPD core, these compounds can elicit markedly different cellular phenotypes that likely arise from the interaction of TPD congeners with either one or two spatially distinct binding sites within tubulin heterodimers (i.e., the seventh site and the vinca site). In the present study, we report the design, synthesis, and evaluation of a series of new TPD congeners, as well as matched molecular pair analyses and computational studies, that further elucidate the structure-activity relationships of MT-active TPDs. These studies led to the identification of novel MT-normalizing TPD candidates that exhibit favorable ADME-PK, including brain penetration and oral bioavailability, as well as brain pharmacodynamic activity.
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- 2023
35. Coumarin-based derivatives targeting Trypanosoma cruzi cruzain and Trypanosoma brucei cathepsin L-like proteases
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Jéssica Alves Nunes, Fabrícia Nunes da Silva, Elany Barbosa da Silva, Clara Andrezza Crisóstomo Bezerra Costa, Johnnatan Duarte de Freitas, Francisco Jaime Bezerra Mendonça-Junior, Miriam Aparecida Giardini, Jair Lage de Siqueira-Neto, James H. McKerrow, Thaiz Rodrigues Teixeira, Louis William Odeesho, Conor R. Caffrey, Sílvia Helena Cardoso, and Edeildo Ferreira da Silva-Júnior
- Subjects
Materials Chemistry ,General Chemistry ,Catalysis - Abstract
Trypanosoma cruzi (Chagas diseases – also named American trypanosomiasis) and T. brucei (human African trypanosomiasis – HAT) negatively impact public health, being endemic in several countries and leading to thousands of deaths per year.
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- 2023
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36. The QDREC web server: determining dose-response characteristics of complex macroparasites in phenotypic drug screens.
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Daniel Asarnow, Liliana Rojo-Arreola, Brian M. Suzuki, Conor R. Caffrey, and Rahul Singh
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- 2015
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37. Microtubule-Stabilizing 1,2,4-Triazolo[1,5
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Thibault, Alle, Carmine, Varricchio, Yuemang, Yao, Bobby, Lucero, Goodwell, Nzou, Stefania, Demuro, Megan, Muench, Khoa D, Vuong, Killian, Oukoloff, Anne-Sophie, Cornec, Karol R, Francisco, Conor R, Caffrey, Virginia M-Y, Lee, Amos B, Smith, Andrea, Brancale, Kurt R, Brunden, and Carlo, Ballatore
- Abstract
Microtubule (MT)-stabilizing 1,2,4-triazolo[1,5
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- 2022
38. Automated image-based phenotypic screening for high-throughput drug discovery.
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Rahul Singh, Michalis Pittas, Ido Heskia, Fengyun Xu, James McKerrow, and Conor R. Caffrey
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- 2009
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39. Discovery of pH-Selective Marine and Plant Natural Product Inhibitors of Cathepsin B Revealed by Screening at Acidic and Neutral pH Conditions
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Von V. Phan, Charles Mosier, Michael C. Yoon, Evgenia Glukhov, Conor R. Caffrey, Anthony J. O’Donoghue, William H. Gerwick, and Vivian Hook
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General Chemical Engineering ,General Chemistry ,Materials Engineering ,Chemical Engineering - Abstract
Dysregulation of cathepsin B, which involves the translocation of the enzyme from acidic pH lysosomes to the neutral pH cytosol, followed by the initiation of cell death and inflammation, occurs in numerous brain disorders. The wide difference in the acidic pH (4.6) of lysosomes compared to the neutral pH (7.2) of the cytosol suggests that screening at different pH conditions may identify pH-selective modulators of cathepsin B. Therefore, a collection of pure marine and plant natural product (NP) compounds, with synthetic compounds, was screened at pH 4.6 and pH 7.2 in cathepsin B assays, which led to the identification of GER-12 (Crossbyanol B) and GER-24 ((7Z,9Z,12Z)-octadeca-7,9,12-trien-5-ynoic acid) marine NP inhibitors at acidic pH but not at neutral pH. GER-12 was effective for the reversible inhibition of cathepsin B, with an IC50 of 3 μM. GER-24 had an IC50 of 16 μM and was found to be an irreversible inhibitor. These results show that NP screening at distinct biological pH conditions can lead to the identification of pH-selective cathepsin B modulators. These findings suggest that screening efforts for molecular probes and drug discovery may consider the biological pH environment of the target in the disease process.
- Published
- 2022
40. Lead Optimization of 3,5-Disubstituted-7-Azaindoles for the Treatment of Human African Trypanosomiasis
- Author
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Dana M. Klug, Nelly El-Sakkary, Cristina Bosch-Navarrete, Rosario Diaz-Gonzalez, Gloria Ceballos-Pérez, Guiomar Pérez-Moreno, Jeremiah D. Momper, Carlos Cordon-Obras, Francisco Gamarro, Dolores Gonzalez Pacanowska, Maria Santos Martinez-Martinez, Lori Ferrins, Conor R. Caffrey, Eftychia M. Mavrogiannaki, Katherine C. Forbes, Raquel García-Hernández, Claudia Gómez-Liñán, Miguel Navarro, Andreu Saura, Luis M. Ruiz-Pérez, Pilar Manzano, Ali Syed, Lisseth Silva, and Michael P. Pollastri
- Subjects
Indoles ,Trypanosoma brucei brucei ,Trypanosoma brucei ,Bioinformatics ,01 natural sciences ,Article ,Structure-Activity Relationship ,03 medical and health sciences ,Parasitic Sensitivity Tests ,parasitic diseases ,Drug Discovery ,medicine ,Humans ,African trypanosomiasis ,030304 developmental biology ,0303 health sciences ,Dose-Response Relationship, Drug ,Molecular Structure ,biology ,Chemistry ,medicine.disease ,biology.organism_classification ,Trypanocidal Agents ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Trypanosomiasis, African ,Neglected tropical diseases ,Molecular Medicine - Abstract
Neglected tropical diseases such as human African trypanosomiasis (HAT) are prevalent primarily in tropical climates and among populations living in poverty. Historically, the lack of economic incentive to develop new treatments for these diseases has meant that existing therapeutics have serious shortcomings in terms of safety, efficacy, and administration, and better therapeutics are needed. We now report a series of 3,5-disubstituted-7-azaindoles identified as growth inhibitors of Trypanosoma brucei, the parasite that causes HAT, through a high-throughput screen. We describe the hit-to-lead optimization of this series and the development and preclinical investigation of 29d, a potent anti-trypanosomal compound with promising pharmacokinetic (PK) parameters. This compound was ultimately not progressed beyond in vivo PK studies due to its inability to penetrate the blood-brain barrier (BBB), critical for stage 2 HAT treatments.
- Published
- 2021
- Full Text
- View/download PDF
41. Drug Discovery and Development for Kinetoplastid Diseases
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Sean Ekins, Renata Barbosa de Oliveira, Carolina Horta Andrade, Lori Ferrins, Kelly A. Bachovchin, Melina Mottin, Conor R. Caffrey, Dietmar Steverding, Ludovica Monti, Rafaela Salgado Ferreira, Kimberley M. Zorn, Carlo Ballatore, Jair L. Siqueira-Neto, Daniel H. Foil, Anthony J. O’Donoghue, Alex M. Clark, and Michael P. Pollastri
- Subjects
Drug ,0303 health sciences ,Drug discovery ,business.industry ,media_common.quotation_subject ,Disease ,Computational biology ,01 natural sciences ,Antiparasitic agent ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,03 medical and health sciences ,Infectious disease (medical specialty) ,Medicine ,business ,030304 developmental biology ,media_common - Abstract
We review the disease, biology and biochemistry of kinetoplastids, as well as the new drugs and drug candidates that have entered the clinic in the last decade. We also describe examples of the pre-clinical exploration of small molecules against various protein targets, (e.g., cysteine proteases, the proteasome and tubulin), as well as cutting-edge molecular and computational strategies, and technologies being brought to bear to discover and develop new anti-trypanosomal drugs. For comprehensive descriptions of the disease, biology and drug therapies prior to 2011, the reader is encouraged to review the chapter by P. M. Woster that appeared in 2010 in the seventh edition of Burger’s Medicinal Chemistry, Drug Discovery, and Development, with the title Antiprotozoal/Antiparasitic Agents.
- Published
- 2021
- Full Text
- View/download PDF
42. A Machine Learning Strategy for Drug Discovery Identifies Anti-Schistosomal Small Molecules
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Kelley Ma, Danielle E. Skinner, Sean Ekins, Eric K Chen, Shengxi Sun, Kimberley M. Zorn, Nelly El-Sakkary, Daniel H. Foil, Thomas J. Lane, Cecelia L McConnon, Lawrence J. Liu, and Conor R. Caffrey
- Subjects
0301 basic medicine ,Phenotypic screening ,030106 microbiology ,Schistosomiasis ,Biology ,Machine learning ,computer.software_genre ,Bayesian ,Article ,Machine Learning ,03 medical and health sciences ,schistosomiasis ,Drug Discovery ,medicine ,Parasite hosting ,Animals ,Schistosoma ,Developmental stage ,Drug discovery ,business.industry ,Bayes Theorem ,Schistosoma mansoni ,medicine.disease ,biology.organism_classification ,030104 developmental biology ,Infectious Diseases ,Larva ,Hit rate ,phenotypic screen ,Artificial intelligence ,business ,computer - Abstract
Schistosomiasis is a chronic and painful disease of poverty caused by the flatworm parasite Schistosoma. Drug discovery for antischistosomal compounds predominantly employs in vitro whole organism (phenotypic) screens against two developmental stages of Schistosoma mansoni, post-infective larvae (somules) and adults. We generated two rule books and associated scoring systems to normalize 3898 phenotypic data points to enable machine learning. The data were used to generate eight Bayesian machine learning models with the Assay Central software according to parasite's developmental stage and experimental time point (≤24, 48, 72, and >72 h). The models helped predict 56 active and nonactive compounds from commercial compound libraries for testing. When these were screened against S. mansoni in vitro, the prediction accuracy for active and inactives was 61% and 56% for somules and adults, respectively; also, hit rates were 48% and 34%, respectively, far exceeding the typical 1-2% hit rate for traditional high throughput screens.
- Published
- 2021
43. Azanitrile Inhibitors of the SmCB1 Protease Target Are Lethal to Schistosoma mansoni: Structural and Mechanistic Insights into Chemotype Reactivity
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Pavla Fajtová, Jim Küppers, Jindřich Fanfrlík, Michael Mareš, Marta Chanová, Petr Pachl, Adéla Jílková, Conor R. Caffrey, Martin Lepšík, Pavlína Řezáčová, Michael Gütschow, Martin Horn, and Petra Rubešová
- Subjects
0301 basic medicine ,Proteases ,Nitrile ,Stereochemistry ,medicine.medical_treatment ,030106 microbiology ,Article ,cysteine proteases ,Cathepsin B ,03 medical and health sciences ,Residue (chemistry) ,chemistry.chemical_compound ,Protein structure ,schistosomiasis ,medicine ,Animals ,Reactivity (chemistry) ,Protease ,biology ,Schistosoma mansoni ,biology.organism_classification ,azapeptide inhibitors ,030104 developmental biology ,Infectious Diseases ,chemistry ,protein structures ,structure−activity relationships ,Cysteine ,Peptide Hydrolases - Abstract
Azapeptide nitriles are postulated to reversibly covalently react with the active-site cysteine residue of cysteine proteases and form isothiosemicarbazide adducts. We investigated the interaction of azadipeptide nitriles with the cathepsin B1 drug target (SmCB1) from Schistosoma mansoni, a pathogen that causes the global neglected disease schistosomiasis. Azadipeptide nitriles were superior inhibitors of SmCB1 over their parent carba analogs. We determined the crystal structure of SmCB1 in complex with an azadipeptide nitrile and analyzed the reaction mechanism using quantum chemical calculations. The data demonstrate that azadipeptide nitriles, in contrast to their carba counterparts, undergo a change from E- to Z-configuration upon binding, which gives rise to a highly favorable energy profile of noncovalent and covalent complex formation. Finally, azadipeptide nitriles were considerably more lethal than their carba analogs against the schistosome pathogen in culture, supporting the further development of this chemotype as a treatment for schistosomiasis.
- Published
- 2020
44. Structure–Bioactivity Relationships of Lapatinib Derived Analogs against Schistosoma mansoni
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Lori Ferrins, Melissa J. Buskes, Conor R. Caffrey, Hitesh B. Jalani, Dana M. Klug, Kelly A. Bachovchin, Nelly El-Sakkary, Allison Leonard, Baljinder Singh, Robert F. Campbell, Michael P. Pollastri, Richard J. Sciotti, Seema Bag, and Monica Clements
- Subjects
Flatworm ,Parasite-hopping ,Letter ,biology ,010405 organic chemistry ,Organic Chemistry ,Neglected tropical disease ,Schistosomiasis ,Computational biology ,medicine.disease ,Lapatinib ,biology.organism_classification ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,3. Good health ,010404 medicinal & biomolecular chemistry ,Schistosoma spp ,Drug Discovery ,medicine ,Parasite hosting ,Schistosoma mansoni ,Target class repurposing ,medicine.drug - Abstract
We recently reported a series of compounds for a solubility-driven optimization campaign of antitrypanosomal compounds. Extending a parasite-hopping approach to the series, a subset of compounds from this library has been cross-screened for activity against the metazoan flatworm parasite, Schistosoma mansoni. This study reports the identification and preliminary development of several potently bioactive compounds against adult schistosomes, one or more of which represent promising leads for further assessment and optimization.
- Published
- 2020
45. EF24, a schistosomicidal curcumin analog: Insights from its synthesis and phenotypic, biochemical and cytotoxic activities
- Author
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Fernanda R. Badoco, Lucas A.L. Paula, Renato P. Orenha, Tiago M.F. Mendes, Iara S. Squarisi, Nelly El-Sakkary, Messias C. Loiola, Naftale Katz, Denise C. Tavares, Mirela I. Sairre, Renato Luis T. Parreira, Fernanda Janku Cabral, Silmara M. Alegretti, Conor R. Caffrey, and Lizandra G. Magalhães
- Subjects
Male ,Mammals ,Glutathione Peroxidase ,Curcumin ,Schistosoma mansoni ,General Medicine ,Toxicology ,Antioxidants ,Praziquantel ,Schistosomicides ,Glutathione Reductase ,Animals ,Schistosomiasis ,Female ,Reactive Oxygen Species ,Glutathione Transferase - Abstract
Praziquantel (PZQ) is the only drug available for community-based control programs which aim to reduce the prevalence and morbidity associated with schistosomiasis. Here, we synthesized and evaluated the schistosomicidal, biochemical and cytotoxic activities of EF24, a synthetic curcumin analog, against different isolates of Schistosoma mansoni. EF24 elicited marked phenotypic alterations at 10 μM against schistosomula and 42-day-old adult worms of the Naval Medical Research Institute (NMRI) isolate. EF24 had 50% effective concentration (EC
- Published
- 2022
- Full Text
- View/download PDF
46. From rational design to serendipity: Discovery of novel thiosemicarbazones as potent trypanocidal compounds
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Saulo Fehelberg Pinto Braga, Viviane Corrêa Santos, Rafael Pinto Vieira, Elany Barbosa da Silva, Ludovica Monti, Susann H. Krake, Pablo D.G. Martinez, Luiz Carlos Dias, Conor R. Caffrey, Jair L. Siqueira-Neto, Renata Barbosa de Oliveira, and Rafaela Salgado Ferreira
- Subjects
Thiosemicarbazones ,Pharmacology ,Structure-Activity Relationship ,Trypanosoma cruzi ,Trypanosoma brucei brucei ,Organic Chemistry ,Drug Discovery ,Humans ,Chagas Disease ,General Medicine ,Cysteine Proteinase Inhibitors ,Trypanocidal Agents - Abstract
Chagas disease is a major public health problem caused by Trypanosoma cruzi, with an estimated 6-7 million people infected and 70 million at risk of infection. T. brucei gambiense and T. brucei rhodesiense are two subspecies of related parasites that cause human African trypanosomiasis, a neglected tropical disease with also millions of people at risk of infection. Pharmacotherapy for both diseases suffers from low efficacy, side effects, or drug resistance. Recently, we reported a noncovalent competitive inhibitor of cruzain (IC
- Published
- 2022
- Full Text
- View/download PDF
47. Biomechanical interactions of Schistosoma mansoni eggs with vascular endothelial cells facilitate egg extravasation
- Author
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Juan C. Lasheras, Danielle E. Skinner, Shun Zhang, Nelly El-Sakary, Lawrence Liu, Shu Chien, Natalie Shee Chen, Conor R. Caffrey, Antoni Garcia De Herreros, Ernesto Criado-Hidalgo, Yi-Ting Yeh, and Juan C. del Álamo
- Subjects
biology ,Chemistry ,biology.organism_classification ,Extravasation ,Cell biology ,medicine.anatomical_structure ,medicine ,Schistosoma mansoni ,Eggshell ,Filopodia ,Intracellular ,Blood vessel ,Schistosoma ,Lumen (unit) - Abstract
The eggs of the parasitic blood fluke, Schistosoma, are the main drivers of the chronic pathologies associated with schistosomiasis, a disease of poverty afflicting approximately 220 million people worldwide. Eggs laid by Schistosoma mansoni in the bloodstream of the host are encapsulated by vascular endothelial cells (VECs), the first step in the migration of the egg from the blood stream into the lumen of the gut and eventual exit from the body. The biomechanics associated with encapsulation and extravasation of the egg are poorly understood. We demonstrate that S. mansoni eggs induce VECs to form two types of membrane extensions during encapsulation; filopodia that probe eggshell surfaces and intercellular nanotubes that presumably facilitate VEC communication. Encapsulation efficiency, the number of filopodia and intercellular nanotubes, and the length of these structures depend on the egg’s vitality and, to a lesser degree, its maturation state. During encapsulation, live eggs induce VEC contractility and membranous structures formation, in a Rho/ROCK pathway-dependent manner. Using elastic hydrogels embedded with fluorescent microbeads as substrates to culture VECs, live eggs induce VECs to exert significantly greater contractile forces during encapsulation than dead eggs, which leads to 3D deformations on both the VEC monolayer and the flexible substrate underneath. These significant mechanical deformations cause the VEC monolayer tension to fluctuate with eventual rupture of VEC junctions, thus facilitating egg transit out of the blood vessel. Overall, our data on the mechanical interplay between host VECs and the schistosome egg improve our understanding of how this parasite manipulates its immediate environment to maintain disease transmission.
- Published
- 2021
- Full Text
- View/download PDF
48. Biomechanical interactions of Schistosoma mansoni eggs with vascular endothelial cells facilitate egg extravasation
- Author
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Yi-Ting Yeh, Danielle E. Skinner, Ernesto Criado-Hidalgo, Natalie Shee Chen, Antoni Garcia-De Herreros, Nelly El-Sakkary, Lawrence Liu, Shun Zhang, Adithan Kandasamy, Shu Chien, Juan C. Lasheras, Juan C. del Álamo, and Conor R. Caffrey
- Subjects
Virology ,Immunology ,Genetics ,Animals ,Endothelial Cells ,Humans ,Schistosomiasis ,Parasitology ,Schistosoma mansoni ,Molecular Biology ,Microbiology ,Schistosomiasis mansoni ,Ovum - Abstract
The eggs of the parasitic blood fluke, Schistosoma, are the main drivers of the chronic pathologies associated with schistosomiasis, a disease of poverty afflicting approximately 220 million people worldwide. Eggs laid by Schistosoma mansoni in the bloodstream of the host are encapsulated by vascular endothelial cells (VECs), the first step in the migration of the egg from the blood stream into the lumen of the gut and eventual exit from the body. The biomechanics associated with encapsulation and extravasation of the egg are poorly understood. We demonstrate that S. mansoni eggs induce VECs to form two types of membrane extensions during encapsulation; filopodia that probe eggshell surfaces and intercellular nanotubes that presumably facilitate VEC communication. Encapsulation efficiency, the number of filopodia and intercellular nanotubes, and the length of these structures depend on the egg’s vitality and, to a lesser degree, its maturation state. During encapsulation, live eggs induce VEC contractility and membranous structures formation in a Rho/ROCK pathway-dependent manner. Using elastic hydrogels embedded with fluorescent microbeads as substrates to culture VECs, live eggs induce VECs to exert significantly greater contractile forces during encapsulation than dead eggs, which leads to 3D deformations on both the VEC monolayer and the flexible substrate underneath. These significant mechanical deformations cause the VEC monolayer tension to fluctuate with the eventual rupture of VEC junctions, thus facilitating egg transit out of the blood vessel. Overall, our data on the mechanical interplay between host VECs and the schistosome egg improve our understanding of how this parasite manipulates its immediate environment to maintain disease transmission.
- Published
- 2021
49. Structure-Based Optimization of Quinazolines as Cruzain and
- Author
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Elany, Barbosa da Silva, Débora A, Rocha, Isadora S, Fortes, Wenqian, Yang, Ludovica, Monti, Jair L, Siqueira-Neto, Conor R, Caffrey, James, McKerrow, Saulo F, Andrade, and Rafaela S, Ferreira
- Subjects
Models, Molecular ,Cysteine Endopeptidases ,Structure-Activity Relationship ,Molecular Structure ,Protein Conformation ,Trypanosoma cruzi ,Trypanosoma brucei brucei ,Protozoan Proteins ,Cysteine Proteinase Inhibitors - Abstract
The cysteine proteases, cruzain and
- Published
- 2021
50. Should the enzyme name ‘rhodesain’ be discontinued?
- Author
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Conor R. Caffrey and Dietmar Steverding
- Subjects
Trypanosoma brucei rhodesiense ,Cathepsin ,Genetics ,chemistry.chemical_classification ,Trypanosoma brucei brucei ,Biology ,Subspecies ,White (mutation) ,Cysteine Endopeptidases ,Trypanosomiasis, African ,Enzyme ,chemistry ,Animals ,Parasitology ,Amino Acid Sequence ,Molecular Biology ,Peptide Hydrolases - Abstract
Rhodesain is the generic name for the cathepsin L-like peptidase of Trypanosoma brucei rhodesiense. The term rhodesain was derived from the subspecies epithet rhodesiense which itself originated form Rhodesia, a historical region in southern Africa named after the 19th century British imperialist and white supremacist Cecil Rhodes. This tainting could be grounds for discontinuing the name, however, there are also scientific grounds. Specifically, protein sequence comparisons and frequency-based difference profiling reveal that rhodesain is essentially identical (99.87-98.44%) to the cathepsin L-like peptidases of both T. b. brucei and T. b. gambiense. Accordingly, and based on a previously proposed terminology for kinetoplastid C1 peptidases (Caffrey and Steverding, 2009), we suggest the use of the formal term, TbrCATL, to denote the cathepsin L-like peptidases of the T. brucei subspecies. The earlier and informal term, 'brucipain', could also be used.
- Published
- 2021
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