795 results on '"Färnert, A."'
Search Results
2. Naturally acquired IgG responses to Plasmodium falciparum do not target the conserved termini of the malaria vaccine candidate Merozoite Surface Protein 2
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Julia Zerebinski, Lucille Margerie, Nan Sophia Han, Maximilian Moll, Matias Ritvos, Peter Jahnmatz, Niklas Ahlborg, Billy Ngasala, Ingegerd Rooth, Ronald Sjöberg, Christopher Sundling, Victor Yman, Anna Färnert, and David Fernando Plaza
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malaria vaccine ,merozoite ,polymorphic antigens ,immune evasion ,structural heterogeneity ,antibody response ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionMalaria remains a significant burden, and a fully protective vaccine against Plasmodium falciparum is critical for reducing morbidity and mortality. Antibody responses against the blood-stage antigen Merozoite Surface Protein 2 (MSP2) are associated with protection from P. falciparum malaria, but its extensive polymorphism is a barrier to its development as a vaccine candidate. New tools, such as long-read sequencing and accurate protein structure modelling allow us to study the genetic diversity and immune responses towards antigens from clinical isolates with unprecedented detail. This study sought to better understand naturally acquired MSP2-specific antibody responses.MethodsIgG responses against recombinantly expressed full-length, central polymorphic regions, and peptides derived from the conserved termini of MSP2 variants sequenced from patient isolates, were tested in plasma from travelers with recent, acute malaria and from individuals living in an endemic area of Tanzania.ResultsIgG responses towards full MSP2 and truncated MSP2 antigens were variant specific. IgG antibodies in the plasma of first-time infected or previously exposed travelers did not recognize the conserved termini of expressed MSP2 variants by ELISA, but they bound 13-amino acid long linear epitopes from the termini in a custom-made peptide array. Alphafold3 modelling suggests extensive structural heterogeneity in the conserved termini upon antigen oligomerization. IgG from individuals living in an endemic region, many who were asymptomatically infected, did not recognize the conserved termini by ELISA.DiscussionOur results suggest that responses to the variable regions are critical for the development of naturally acquired immunity towards MSP2.
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- 2024
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3. Head-to-head comparison of two loop-mediated isothermal amplification (LAMP) kits for diagnosis of malaria in a non-endemic setting
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Anna-Clara Ivarsson, Elin Fransén, Ioanna Broumou, Anna Färnert, Kristina E. M. Persson, and Sara Karlsson Söbirk
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Malaria ,LAMP ,Loop-mediated isothermal amplification ,Diagnosis ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Light microscopy and rapid diagnostic tests (RDT) have long been the recommended diagnostic methods for malaria. However, in recent years, loop-mediated isothermal amplification (LAMP) techniques have been shown to offer superior performance, in particular concerning low-grade parasitaemia, by delivering higher sensitivity and specificity with low laboratory capacity requirements in little more than an hour. In this study, the diagnostic performance of two LAMP kits were assessed head-to-head, compared to highly sensitive quantitative real time PCR (qPCR), in a non-endemic setting. Methods In this retrospective validation study two LAMP kits; Alethia® Illumigene Malaria kit and HumaTurb Loopamp™ Malaria Pan Detection (PDT) kit, were evaluated head-to-head for detection of Plasmodium-DNA in 133 biobanked blood samples from suspected malaria cases at the Clinical Microbiology Laboratory of Region Skåne, Sweden to determine their diagnostic performance compared to qPCR. Results Of the 133 samples tested, qPCR detected Plasmodium DNA in 41 samples (defined as true positives), and the two LAMP methods detected 41 and 37 of those, respectively. The results from the HumaTurb Loopamp™ Malaria PDT kit were in complete congruence with the qPCR, with a sensitivity of 100% (95% CI 91.40–100%) and specificity of 100% (95% CI 96.07–100%). The Alethia® Illumigene Malaria kit had a sensitivity of 90.24% (95% CI 76.87–97.28) and a specificity of 95.65% (95% CI 89.24–98.80) as compared to qPCR. Conclusions This head-to-head comparison showed higher performance indicators of the HumaTurb Loopamp™ Malaria PDT kit compared to the Alethia® illumigene Malaria kit for detection of malaria.
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- 2023
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4. A panel of recombinant Leishmania donovani cell surface and secreted proteins identifies LdBPK_323600.1 as a serological marker of symptomatic infection
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Adam J. Roberts, Han Boon Ong, Simon Clare, Cordelia Brandt, Katherine Harcourt, Yegnasew Takele, Prakash Ghosh, Angela Toepp, Max Waugh, Daniel Matano, Anna Färnert, Emily Adams, Javier Moreno, Margaret Mbuchi, Christine Petersen, Dinesh Mondal, Pascale Kropf, and Gavin J. Wright
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serology ,proteins ,visceral leishmaniasis ,ELISA ,Leishmania donovani ,recombinant proteins ,Microbiology ,QR1-502 - Abstract
ABSTRACTVisceral leishmaniasis is a deadly infectious disease and is one of the world’s major neglected health problems. Because the symptoms of infection are similar to other endemic diseases, accurate diagnosis is crucial for appropriate treatment. Definitive diagnosis using splenic or bone marrow aspirates is highly invasive, and so, serological assays are preferred, including the direct agglutination test (DAT) or rK39 strip test. These tests, however, are either difficult to perform in the field (DAT) or lack specificity in some endemic regions (rK39), making the development of new tests a research priority. The availability of Leishmania spp. genomes presents an opportunity to identify new diagnostic targets. Here, we use genome data and a mammalian protein expression system to create a panel of 93 proteins consisting of the extracellular ectodomains of the Leishmania donovani cell surface and secreted proteins. We use these panel and sera from murine experimental infection models and natural human and canine infections to identify new candidates for serological diagnosis. We observed a concordance between the most immunoreactive antigens in different host species and transmission settings. The antigen encoded by the LdBPK_323600.1 gene can diagnose Leishmania infections with high sensitivity and specificity in patient cohorts from different endemic regions including Bangladesh and Ethiopia. In longitudinal sampling of treated patients, we observed reductions in immunoreactivity to LdBPK_323600.1 suggesting it could be used to diagnose treatment success. In summary, we have identified new antigens that could contribute to improved serological diagnostic tests to help control the impact of this deadly tropical infectious disease.IMPORTANCEVisceral leishmaniasis is fatal if left untreated with patients often displaying mild and non-specific symptoms during the early stages of infection making accurate diagnosis important. Current methods for diagnosis require highly trained medical staff to perform highly invasive biopsies of the liver or bone marrow which pose risks to the patient. Less invasive molecular tests are available but can suffer from regional variations in their ability to accurately diagnose an infection. To identify new diagnostic markers of visceral leishmaniasis, we produced and tested a panel of 93 proteins identified from the genome of the parasite responsible for this disease. We found that the pattern of host antibody reactivity to these proteins was broadly consistent across naturally acquired infections in both human patients and dogs, as well as experimental rodent infections. We identified a new protein called LdBPK_323600.1 that could accurately diagnose visceral leishmaniasis infections in humans.
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- 2024
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5. Evaluation of the accuracy of a multi-infection screening test based on a multiplex immunoassay targeting imported diseases common in migrant populations
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Aguilar, Ruth, Cruz, Angeline, Jiménez, Alfons, Almuedo, Alex, Saumell, Carme Roca, Lopez, Marina Gigante, Gasch, Oriol, Falcó, Gemma, Jiménez-Lozano, Ana, Martínez-Perez, Angela, Sanchez-Collado, Consol, Tedesco, Andrea, López, Manuel Carlos, Pinazo, María Jesús, Leonel, Thais, Bisoffi, Zeno, Färnert, Anna, Dobaño, Carlota, and Requena-Méndez, Ana
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- 2024
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6. Predicting sepsis onset using a machine learned causal probabilistic network algorithm based on electronic health records data
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John Karlsson Valik, Logan Ward, Hideyuki Tanushi, Anders F. Johansson, Anna Färnert, Mads Lause Mogensen, Brian W. Pickering, Vitaly Herasevich, Hercules Dalianis, Aron Henriksson, and Pontus Nauclér
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Medicine ,Science - Abstract
Abstract Sepsis is a leading cause of mortality and early identification improves survival. With increasing digitalization of health care data automated sepsis prediction models hold promise to aid in prompt recognition. Most previous studies have focused on the intensive care unit (ICU) setting. Yet only a small proportion of sepsis develops in the ICU and there is an apparent clinical benefit to identify patients earlier in the disease trajectory. In this cohort of 82,852 hospital admissions and 8038 sepsis episodes classified according to the Sepsis-3 criteria, we demonstrate that a machine learned score can predict sepsis onset within 48 h using sparse routine electronic health record data outside the ICU. Our score was based on a causal probabilistic network model—SepsisFinder—which has similarities with clinical reasoning. A prediction was generated hourly on all admissions, providing a new variable was registered. Compared to the National Early Warning Score (NEWS2), which is an established method to identify sepsis, the SepsisFinder triggered earlier and had a higher area under receiver operating characteristic curve (AUROC) (0.950 vs. 0.872), as well as area under precision-recall curve (APR) (0.189 vs. 0.149). A machine learning comparator based on a gradient-boosting decision tree model had similar AUROC (0.949) and higher APR (0.239) than SepsisFinder but triggered later than both NEWS2 and SepsisFinder. The precision of SepsisFinder increased if screening was restricted to the earlier admission period and in episodes with bloodstream infection. Furthermore, the SepsisFinder signaled median 5.5 h prior to antibiotic administration. Identifying a high-risk population with this method could be used to tailor clinical interventions and improve patient care.
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- 2023
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7. Malaria parasite prevalence among migrants: a systematic review and meta-analysis
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Rodríguez-Cuadrado, Azucena, Monge-Maillo, Begoña, Bocanegra, Cristina, Salvador, Fernando, Oliveira, Ines, Salas-Coronas, Joaquin, Corbacho-Loarte, Maria Dolores, Requena-Méndez, Ana, Cattaneo, Paolo, Bogale, Rebecca T., Marti-Soler, Helena, Wångdahl, Andreas, Buonfrate, Dora, Bisoffi, Zeno, and Färnert, Anna
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- 2023
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8. Clinical presentation and diagnosis of imported strongyloidiasis at a tertiary hospital, Stockholm, Sweden
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Requena-Méndez, Ana, Roos, Emilia, van der Werff, Suzanne D., Wyss, Katja, Davidsson, Leigh, Naucler, Pontus, Färnert, Anna, and Asgeirsson, Hilmir
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- 2023
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9. Delayed generation of functional virus-specific circulating T follicular helper cells correlates with severe COVID-19
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Yu, Meng, Charles, Afandi, Cagigi, Alberto, Christ, Wanda, Österberg, Björn, Falck-Jones, Sara, Azizmohammadi, Lida, Åhlberg, Eric, Falck-Jones, Ryan, Svensson, Julia, Nie, Mu, Warnqvist, Anna, Hellgren, Fredrika, Lenart, Klara, Arcoverde Cerveira, Rodrigo, Ols, Sebastian, Lindgren, Gustaf, Lin, Ang, Maecker, Holden, Bell, Max, Johansson, Niclas, Albert, Jan, Sundling, Christopher, Czarnewski, Paulo, Klingström, Jonas, Färnert, Anna, Loré, Karin, and Smed-Sörensen, Anna
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- 2023
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10. A genomic platform for surveillance and antigen discovery in Plasmodium spp. using long-read amplicon sequencing
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Plaza, David Fernando, Zerebinski, Julia, Broumou, Ioanna, Lautenbach, Maximilian Julius, Ngasala, Billy, Sundling, Christopher, and Färnert, Anna
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- 2023
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11. Malaria parasite prevalence in Sub-Saharan African migrants screened in Sweden: a cross-sectional study
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Wångdahl, Andreas, Bogale, Rebecca Tafesse, Eliasson, Isabelle, Broumou, Ioanna, Faroogh, Fariba, Lind, Filip, Vashchuk, Ganna, Hildell, Adina, Franson, Suzanne, Hallberg, Emil, Grip, Isabelle, Nordling, Irene, Gervin, Angelica, Kaitoly, Shelan, Tekleab, Berhane, Wyss, Katja, Requena-Méndez, Ana, Hertting, Olof, and Färnert, Anna
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- 2023
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12. Archaic humans have contributed to large-scale variation in modern human T cell receptor genes
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Corcoran, Martin, Chernyshev, Mark, Mandolesi, Marco, Narang, Sanjana, Kaduk, Mateusz, Ye, Kewei, Sundling, Christopher, Färnert, Anna, Kreslavsky, Taras, Bernhardsson, Carolina, Larena, Maximilian, Jakobsson, Mattias, and Karlsson Hedestam, Gunilla B.
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- 2023
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13. The association between pre-exposure to glucocorticoids and other immunosuppressant drugs with severe COVID-19 outcomes
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Brodin, Rakel, van der Werff, Suzannes Desirée, Hedberg, Pontus, Färnert, Anna, Nauclér, Pontus, Bergman, Peter, and Requena-Méndez, Ana
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- 2022
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14. Antibody-Dependent Respiratory Burst against Plasmodium falciparum Merozoites in Individuals Living in an Area with Declining Malaria Transmission
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Doreen D. Mutemi, James Tuju, Rodney Ogwang, Lydia Nyamako, Kennedy M. Wambui, Ivette R. Cruz, Pär Villner, Victor Yman, Samson M. Kinyanjui, Ingegerd Rooth, Billy Ngasala, Anna Färnert, and Faith H. A. Osier
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Plasmodium falciparum ,malaria ,transmission ,ADRB ,immunity ,vaccines ,Medicine - Abstract
Malaria transmission intensity affects the development of naturally acquired immunity to malaria. An absolute correlate measure of protection against malaria is lacking. However, antibody-mediated functions against Plasmodium falciparum correlate with protection against malaria. In children, antibody-mediated functions against P. falciparum decline with reduced exposure. It is unclear whether adults maintain antibody-mediated functions as malaria transmission declines. This study assessed antibody-dependent respiratory burst (ADRB) in individuals from an area with declining malaria transmission. In an age-matched analysis, we compare ADRB activity during high versus low malaria transmission periods. Age significantly predicted higher ADRB activity in the high (p < 0.001) and low (p < 0.001) malaria transmission periods. ADRB activity was higher during the high compared to the low malaria transmission period in older children and adults. Only older adults during the high malaria transmission period had their median ADRB activity above the ADRB cut-off. Ongoing P. falciparum infection influenced ADRB activity during the low (p = 0.01) but not the high (p = 0.29) malaria transmission period. These findings propose that naturally acquired immunity to P. falciparum is affected in children and adults as malaria transmission declines, implying that vaccines will be necessary to induce and maintain protection against malaria.
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- 2024
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15. Systems analysis shows a role of cytophilic antibodies in shaping innate tolerance to malaria
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Lautenbach, Maximilian Julius, Yman, Victor, Silva, Carolina Sousa, Kadri, Nadir, Broumou, Ioanna, Chan, Sherwin, Angenendt, Sina, Sondén, Klara, Plaza, David Fernando, Färnert, Anna, and Sundling, Christopher
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- 2022
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16. Erythrocytes Induce Vascular Dysfunction in COVID-19
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Mahdi, Ali, Collado, Aida, Tengbom, John, Jiao, Tong, Wodaje, Tigist, Johansson, Niclas, Farnebo, Filip, Färnert, Anna, Yang, Jiangning, Lundberg, Jon O., Zhou, Zhichao, and Pernow, John
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- 2022
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17. Distinct kinetics of antibodies to 111 Plasmodium falciparum proteins identifies markers of recent malaria exposure
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Victor Yman, James Tuju, Michael T. White, Gathoni Kamuyu, Kennedy Mwai, Nelson Kibinge, Muhammad Asghar, Christopher Sundling, Klara Sondén, Linda Murungi, Daniel Kiboi, Rinter Kimathi, Timothy Chege, Emily Chepsat, Patience Kiyuka, Lydia Nyamako, Faith H. A. Osier, and Anna Färnert
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Science - Abstract
Serological markers of recent Plasmodium falciparum infection could be useful to estimate incidence. Here, the authors identify a combination of five serological markers to detect exposure to infection within the previous three months with >80% sensitivity and specificity.
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- 2022
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18. Human influenza virus infection elicits distinct patterns of monocyte and dendritic cell mobilization in blood and the nasopharynx
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Sindhu Vangeti, Sara Falck-Jones, Meng Yu, Björn Österberg, Sang Liu, Muhammad Asghar, Klara Sondén, Clare Paterson, Penn Whitley, Jan Albert, Niclas Johansson, Anna Färnert, and Anna Smed-Sörensen
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influenza A virus ,nasopharynx ,dendritic cells ,intermediate monocytes ,TNF ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
During respiratory viral infections, the precise roles of monocytes and dendritic cells (DCs) in the nasopharynx in limiting infection and influencing disease severity are incompletely described. We studied circulating and nasopharyngeal monocytes and DCs in healthy controls (HCs) and in patients with mild to moderate infections (primarily influenza A virus [IAV]). As compared to HCs, patients with acute IAV infection displayed reduced DC but increased intermediate monocytes frequencies in blood, and an accumulation of most monocyte and DC subsets in the nasopharynx. IAV patients had more mature monocytes and DCs in the nasopharynx, and higher levels of TNFα, IL-6, and IFNα in plasma and the nasopharynx than HCs. In blood, monocytes were the most frequent cellular source of TNFα during IAV infection and remained responsive to additional stimulation with TLR7/8L. Immune responses in older patients skewed towards increased monocyte frequencies rather than DCs, suggesting a contributory role for monocytes in disease severity. In patients with other respiratory virus infections, we observed changes in monocyte and DC frequencies in the nasopharynx distinct from IAV patients, while differences in blood were more similar across infection groups. Using SomaScan, a high-throughput aptamer-based assay to study proteomic changes between patients and HCs, we found differential expression of innate immunity-related proteins in plasma and nasopharyngeal secretions of IAV and SARS-CoV-2 patients. Together, our findings demonstrate tissue-specific and pathogen-specific patterns of monocyte and DC function during human respiratory viral infections and highlight the importance of comparative investigations in blood and the nasopharynx.
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- 2023
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19. Biomarkers of cellular aging during a controlled human malaria infection
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Aurelie Miglar, Isaie J. Reuling, Xi Zen Yap, Anna Färnert, Robert W. Sauerwein, and Muhammad Asghar
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Medicine ,Science - Abstract
Abstract Cellular aging is difficult to study in individuals with natural infection, given the diversity of symptom duration and clinical presentation, and the high interference of aging-related processes with host and environmental factors. To address this challenge, we took advantage of the controlled human malaria infection (CHMI) model. This approach allowed us to characterize the relationship among cellular aging markers prior, during and post malaria pathophysiology in humans, controlling for infection dose, individual heterogeneity, previous exposure and co-infections. We demonstrate that already low levels of Plasmodium falciparum impact cellular aging by inducing high levels of inflammation and redox-imbalance; and that cellular senescence reversed after treatment and parasite clearance. This study provides insights into the complex relationship of telomere length, cellular senescence, telomerase expression and aging-related processes during a single malaria infection.
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- 2021
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20. Genotyping of Plasmodium falciparum to Assess Clone Composition in Parasite Cultures
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Broumou, Ioanna, primary, Plaza, David Fernando, additional, and Färnert, Anna, additional
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- 2022
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21. Naturally acquired IgG responses to Plasmodium falciparum do not target the conserved termini of the malaria vaccine candidate Merozoite Surface Protein 2.
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Zerebinski, Julia, Margerie, Lucille, Han, Nan Sophia, Moll, Maximilian, Ritvos, Matias, Jahnmatz, Peter, Ahlborg, Niklas, Ngasala, Billy, Rooth, Ingegerd, Sjöberg, Ronald, Sundling, Christopher, Yman, Victor, Färnert, Anna, and Plaza, David Fernando
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NATURAL immunity ,ANTIBODY formation ,PEPTIDES ,MALARIA vaccines ,AMINO acid sequence - Abstract
Introduction: Malaria remains a significant burden, and a fully protective vaccine against Plasmodium falciparum is critical for reducing morbidity and mortality. Antibody responses against the blood-stage antigen Merozoite Surface Protein 2 (MSP2) are associated with protection from P. falciparum malaria, but its extensive polymorphism is a barrier to its development as a vaccine candidate. New tools, such as long-read sequencing and accurate protein structure modelling allow us to study the genetic diversity and immune responses towards antigens from clinical isolates with unprecedented detail. This study sought to better understand naturally acquired MSP2-specific antibody responses. Methods: IgG responses against recombinantly expressed full-length, central polymorphic regions, and peptides derived from the conserved termini of MSP2 variants sequenced from patient isolates, were tested in plasma from travelers with recent, acute malaria and from individuals living in an endemic area of Tanzania. Results: IgG responses towards full MSP2 and truncated MSP2 antigens were variant specific. IgG antibodies in the plasma of first-time infected or previously exposed travelers did not recognize the conserved termini of expressed MSP2 variants by ELISA, but they bound 13-amino acid long linear epitopes from the termini in a custom-made peptide array. Alphafold3 modelling suggests extensive structural heterogeneity in the conserved termini upon antigen oligomerization. IgG from individuals living in an endemic region, many who were asymptomatically infected, did not recognize the conserved termini by ELISA. Discussion: Our results suggest that responses to the variable regions are critical for the development of naturally acquired immunity towards MSP2. [ABSTRACT FROM AUTHOR]
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- 2024
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22. Shedding of infectious SARS-CoV-2 by hospitalized COVID-19 patients in relation to serum antibody responses
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Hedvig Glans, Sara Gredmark-Russ, Mikaela Olausson, Sara Falck-Jones, Renata Varnaite, Wanda Christ, Kimia T. Maleki, Maria Lind Karlberg, Sandra Broddesson, Ryan Falck-Jones, Max Bell, Niclas Johansson, Anna Färnert, Anna Smed-Sörensen, Jonas Klingström, and Andreas Bråve
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COVID-19 ,SARS-CoV-2 ,Viral shedding ,Culture ,Antibodies ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is a global pandemic. The understanding of the transmission and the duration of viral shedding in SARS-CoV-2 infection is still limited. Objectives To assess the timeframe and potential risk of SARS-CoV-2 transmission from hospitalized COVID-19 patients in relation to antibody response. Method We performed a cross-sectional study of 36 COVID-19 patients hospitalized at Karolinska University Hospital. Patients with more than 8 days of symptom duration were sampled from airways, for PCR analysis of SARS-CoV-2 RNA and in vitro culture of replicating virus. Serum SARS-CoV-2-specific immunoglobulin G (IgG) and neutralizing antibodies titers were assessed by immunofluorescence assay (IFA) and microneutralization assay. Results SARS-CoV-2 RNA was detected in airway samples in 23 patients (symptom duration median 15 days, range 9–53 days), whereas 13 patients were SARS-CoV-2 RNA negative (symptom duration median 21 days, range 10–37 days). Replicating virus was detected in samples from 4 patients at 9–16 days. All but two patients had detectable levels of SARS-CoV-2-specific IgG in serum, and SARS-CoV-2 neutralizing antibodies were detected in 33 out of 36 patients. Total SARS-CoV-2-specific IgG titers and neutralizing antibody titers were positively correlated. High levels of both total IgG and neutralizing antibody titers were observed in patients sampled later after symptom onset and in patients where replicating virus could not be detected. Conclusions Our data suggest that the presence of SARS-Cov-2 specific antibodies in serum may indicate a lower risk of shedding infectious SARS-CoV-2 by hospitalized COVID-19 patients.
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- 2021
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23. Determinants of the varied profiles of Plasmodium falciparum infections among infants living in Kintampo, Ghana
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Akua Kyerewaa Botwe, Felix Boakye Oppong, Stephaney Gyaase, Seth Owusu-Agyei, Muhammad Asghar, Kwaku Poku Asante, Anna Färnert, and Faith Osier
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Infants ,Malaria ,Falciparum ,Asymptomatic ,Infections ,Risk-of-malaria ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Understanding why some infants tolerate infections, remaining asymptomatic while others succumb to repeated symptomatic malaria is beneficial for studies of naturally acquired immunity and can guide control interventions. This study compared demographic, host and maternal factors associated with being either parasite negative or having asymptomatic infections versus developing symptomatic malaria in the first year of life. Methods A birth cohort (n = 1264) was monitored longitudinally over two years for malaria infections in Kintampo, Ghana. Symptomatic and asymptomatic infections were detected actively through monthly home visits, complemented by passive case detection. Light microscopy was used to detect parasitaemia. Based on data from a minimum of eight monthly visits within the first year of life, infants were classified into one of four groups: “parasite negative”, “only-asymptomatic”, “only-symptomatic” or “alternating” i.e., sometimes symptomatic and other times asymptomatic. The host and maternal characteristics and demographic factors in relation to these four groups were compared. Results The parasite negative group formed 36% of the cohort, whilst the only-symptomatic were 35%. The alternating group were 22% and the only-asymptomatic were 7% of the cohort. There were significant associations between residence, socio-economic status (SES), parity, IPTp doses, delivery place of infant and having or not having malaria parasites. Maternal factors such as early commencement and frequency of ante-natal care (ANC) were significantly higher in the parasite negative group compared to all others. ITN use in pregnancy increased the odds of infant having only asymptomatic infections (“protected against disease”). Placental malaria was more common in the groups of infants with symptomatic malaria. Urban residence was significantly higher in the parasite negative group, while birth in the malaria transmission season were significantly more common in the alternating and parasite negative groups. Risk factors for infants with symptomatic malaria included low SES, birth in private maternity homes, sickle cell normal variant, lower MUAC, reported intake of anti-malarials and increased morbidity before the first microscopic infection was detected. Conclusion Strengthening ANC by encouraging early and regular attendance, the use of IPTp, maternal bed nets and improving the nourishment of infants help reduce the frequency of symptomatic malaria over the first year of life.
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- 2021
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24. Case Report: β-thalassemia major on the East African coast [version 1; peer review: 2 approved]
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Neema Mturi, Alexander W. Macharia, George Mochamah, Anna Färnert, Thad Howard, Thomas N. Williams, Russell E. Ware, Johnstone Makale, and Peter Olupot-Olupot
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β-thalassemia major ,rs33941849 ,East Africa ,HbA2 ,sequencing ,eng ,Medicine ,Science - Abstract
Background: β-thalassemia is rare in sub-Saharan Africa and to our knowledge there has been no case of homozygous β-thalassemia major reported from this region. In a recent cohort study, we identified four β-thalassemia mutations among 83 heterozygous carriers in Kilifi, Kenya. One of the mutations identified was a rare β-globin gene initiation codon mutation (ATG➝ACG) (rs33941849). Here we present a patient with β-thalassemia major resulting from this mutation, only the second homozygous patient to have been reported. Methods: The female patient presented to Kilifi County Hospital aged two years with a one week left sided abdominal swelling. Clinical, hematological and genetic information were collected at admission and follow-up. Results: Admission bloods revealed marked anemia, with a hemoglobin (Hb) value of 6.6 g/dL and a low mean corpuscular volume of 64 fL. High performance liquid chromatography (HPLC) revealed the absence of HbA0 and elevated levels of HbF, suggesting a diagnosis of β-thalassemia major. Sequencing revealed that the child was homozygous for the rs33941849 initiation codon mutation. Conclusions: We hope that this study will create awareness regarding the presence of β-thalassemia as a potential public health problem in the East Africa region and will prompt the development of local guidelines regarding the diagnosis and management of this condition.
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- 2022
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25. Robust T Cell Immunity in Convalescent Individuals with Asymptomatic or Mild COVID-19
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Akber, Mira, Berglin, Lena, Bergsten, Helena, Brighenti, Susanna, Brownlie, Demi, Butrym, Marta, Chambers, Benedict, Chen, Puran, Jeannin, Martin Cornillet, Grip, Jonathan, Gomez, Angelica Cuapio, Dillner, Lena, Lozano, Isabel Diaz, Dzidic, Majda, Tullberg, Malin Flodström, Färnert, Anna, Glans, Hedvig, Haroun-Izquierdo, Alvaro, Henriksson, Elizabeth, Hertwig, Laura, Kalsum, Sadaf, Kokkinou, Efthymia, Kvedaraite, Egle, Loreti, Marco, Lourda, Magalini, Maleki, Kimia, Malmberg, Karl-Johan, Marquardt, Nicole, Maucourant, Christopher, Michaelsson, Jakob, Mjösberg, Jenny, Moll, Kirsten, Muva, Jagadees, Mårtensson, Johan, Nauclér, Pontus, Norrby-Teglund, Anna, Medina, Laura Palma, Persson, Björn, Radler, Lena, Ringqvist, Emma, Sandberg, John Tyler, Sohlberg, Ebba, Soini, Tea, Svensson, Mattias, Tynell, Janne, Varnaite, Renata, Kries, Andreas Von, Unge, Christian, Sekine, Takuya, Perez-Potti, André, Rivera-Ballesteros, Olga, Strålin, Kristoffer, Gorin, Jean-Baptiste, Olsson, Annika, Llewellyn-Lacey, Sian, Kamal, Habiba, Bogdanovic, Gordana, Muschiol, Sandra, Wullimann, David J., Kammann, Tobias, Emgård, Johanna, Parrot, Tiphaine, Folkesson, Elin, Rooyackers, Olav, Eriksson, Lars I., Henter, Jan-Inge, Sönnerborg, Anders, Allander, Tobias, Albert, Jan, Nielsen, Morten, Klingström, Jonas, Gredmark-Russ, Sara, Björkström, Niklas K., Sandberg, Johan K., Price, David A., Ljunggren, Hans-Gustaf, Aleman, Soo, and Buggert, Marcus
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- 2020
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26. Treatment of Chronic Asymptomatic Plasmodium falciparum Infection Does Not Increase the Risk of Clinical Malaria Upon Reinfection.
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Portugal, Silvia, Tran, Tuan, Ongoiba, Aissata, Bathily, Aboudramane, Li, Shanping, Doumbo, Safiatou, Skinner, Jeff, Doumtabe, Didier, Kone, Younoussou, Sangala, Jules, Jain, Aarti, Davies, D, Hung, Christopher, Liang, Li, Ricklefs, Stacy, Homann, Manijeh, Felgner, Philip, Porcella, Stephen, Färnert, Anna, Doumbo, Ogobara, Kayentao, Kassoum, Greenwood, Brian, Traore, Boubacar, and Crompton, Peter
- Subjects
Plasmodium falciparum ,asymptomatic ,malaria ,malaria/drug therapy ,mass drug administration. ,Adolescent ,Adult ,Antibodies ,Protozoan ,Antimalarials ,Asymptomatic Infections ,Child ,Child ,Preschool ,Chronic Disease ,Female ,Humans ,Immunoglobulin G ,Infant ,Malaria ,Falciparum ,Male ,Mali ,Plasmodium falciparum ,Population Surveillance ,Risk ,Seasons ,Young Adult - Abstract
BACKGROUND: Chronic asymptomatic Plasmodium falciparum infections are common in endemic areas and are thought to contribute to the maintenance of malaria immunity. Whether treatment of these infections increases the subsequent risk of clinical episodes of malaria is unclear. METHODS: In a 3-year study in Mali, asymptomatic individuals with or without P. falciparum infection at the end of the 6-month dry season were identified by polymerase chain reaction (PCR), and clinical malaria risk was compared during the ensuing 6-month malaria transmission season. At the end of the second dry season, 3 groups of asymptomatic children were identified: (1) children infected with P. falciparum as detected by rapid diagnostic testing (RDT) who were treated with antimalarials (n = 104), (2) RDT-negative children whose untreated P. falciparum infections were detected retrospectively by PCR (n = 55), and (3) uninfected children (RDT/PCR negative) (n = 434). Clinical malaria risk during 2 subsequent malaria seasons was compared. Plasmodium falciparum-specific antibody kinetics during the dry season were compared in children who did or did not harbor asymptomatic P. falciparum infections. RESULTS: Chronic asymptomatic P. falciparum infection predicted decreased clinical malaria risk during the subsequent malaria season(s); treatment of these infections did not alter this reduced risk. Plasmodium falciparum-specific antibodies declined similarly in children who did or did not harbor chronic asymptomatic P. falciparum infection during the dry season. CONCLUSIONS: These findings challenge the notion that chronic asymptomatic P. falciparum infection maintains malaria immunity and suggest that mass drug administration during the dry season should not increase the subsequent risk of clinical malaria.
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- 2017
27. Severity of Plasmodium falciparum and Non- falciparum Malaria in Travelers and Migrants : A Nationwide Observational Study Over 2 Decades in Sweden
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Wångdahl, Andreas, Wyss, Katja, Saduddin, Dashti, Bottai, Matteo, Ydring, Elsie, Vikerfors, Tomas, and Färnert, Anna
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- 2019
28. Malaria and risk of lymphoid neoplasms and other cancer: a nationwide population-based cohort study
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Katja Wyss, Fredrik Granath, Andreas Wångdahl, Therese Djärv, Michael Fored, Pontus Naucler, and Anna Färnert
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Malaria ,Lymphoid neoplasms ,Lymphoma ,Cancer ,Medicine - Abstract
Abstract Background Malaria is associated with Burkitt lymphoma among children in Sub-Saharan Africa. No longitudinal studies have assessed the long-term risk of other lymphoma or cancer overall. Here, we investigated the risk of lymphoid neoplasms and other cancer after malaria. Methods We included 4125 patients diagnosed with malaria in Sweden in 1987–2015, identified either through the National Surveillance Database at the Public Health Agency of Sweden, the National Inpatient and Outpatient Register, or by reports from microbiology departments. A comparator cohort (N = 66,997) matched on sex, age and birth region was retrieved from the general population and an additional cohort with all individuals born in Sub-Saharan Africa registered in the Total Population Register in 1987–2015 (N = 171,756). Incident lymphomas and other cancers were identified through linkage with the Swedish Cancer Register. Hazard ratios (HRs) were assessed using Cox regression with attained age as the timescale. Results A total of 20 lymphoid neoplasms and 202 non-haematological cancers were identified among malaria patients during a mean follow-up of 13.3 and 13.7 years, respectively. The overall risk of lymphoid neoplasms was not significantly increased (hazard ratio [HR] 1.24, 95% confidence interval [CI] 0.79–1.94), neither did we find any association with all-site non-haematological cancer (HR 0.89, 95% CI 0.77–1.02). However, in the Sub-Saharan Africa cohort, we observed an increased risk of lymphoid neoplasms after malaria diagnosis (HR 2.39, 95% CI 1.06–5.40), but no difference in the risk of other cancer (HR 1.01, 95% CI 0.70–1.45). The association could not be explained by co-infection with HIV or chronic hepatitis B or C, since the risk estimate was largely unchanged after excluding patients with these comorbidities (HR 2.63, 95% CI 1.08–6.42). The risk became more pronounced when restricting analyses to only including non-Hodgkin and Hodgkin lymphomas (HR 3.49, 95% CI 1.42–8.56). Conclusion Individuals born in malaria-endemic areas and diagnosed with malaria in Sweden had an increased risk of lymphoid neoplasms, especially B cell lymphoma. There was no association with cancer overall nor did single malaria episodes confer an increased risk in travellers.
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- 2020
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29. Multiplex analysis of antigen-specific memory B cells in humans using reversed B-cell FluoroSpot
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Jahnmatz, Peter, Sundling, Christopher, Makower, Bartek, Sondén, Klara, Färnert, Anna, and Ahlborg, Niklas
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- 2020
- Full Text
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30. Antibody-Dependent Respiratory Burst against Plasmodium falciparum Merozoites in Individuals Living in an Area with Declining Malaria Transmission
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Mutemi, Doreen D., Tuju, James, Ogwang, Rodney, Nyamako, Lydia, Wambui, Kennedy M., Cruz, Ivette R., Villner, Pär, Yman, Victor, Kinyanjui, Samson M., Rooth, Ingegerd, Ngasala, Billy, Färnert, Anna, Osier, Faith H. A., Mutemi, Doreen D., Tuju, James, Ogwang, Rodney, Nyamako, Lydia, Wambui, Kennedy M., Cruz, Ivette R., Villner, Pär, Yman, Victor, Kinyanjui, Samson M., Rooth, Ingegerd, Ngasala, Billy, Färnert, Anna, and Osier, Faith H. A.
- Abstract
Malaria transmission intensity affects the development of naturally acquired immunity to malaria. An absolute correlate measure of protection against malaria is lacking. However, antibody-mediated functions against Plasmodium falciparum correlate with protection against malaria. In children, antibody-mediated functions against P. falciparum decline with reduced exposure. It is unclear whether adults maintain antibody-mediated functions as malaria transmission declines. This study assessed antibody-dependent respiratory burst (ADRB) in individuals from an area with declining malaria transmission. In an age-matched analysis, we compare ADRB activity during high versus low malaria transmission periods. Age significantly predicted higher ADRB activity in the high (p < 0.001) and low (p < 0.001) malaria transmission periods. ADRB activity was higher during the high compared to the low malaria transmission period in older children and adults. Only older adults during the high malaria transmission period had their median ADRB activity above the ADRB cut-off. Ongoing P. falciparum infection influenced ADRB activity during the low (p = 0.01) but not the high (p = 0.29) malaria transmission period. These findings propose that naturally acquired immunity to P. falciparum is affected in children and adults as malaria transmission declines, implying that vaccines will be necessary to induce and maintain protection against malaria.
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- 2024
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31. Increased circulation time of Plasmodium falciparum underlies persistent asymptomatic infection in the dry season
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Andrade, Carolina M., Fleckenstein, Hannah, Thomson-Luque, Richard, Doumbo, Safiatou, Lima, Nathalia F., Anderson, Carrie, Hibbert, Julia, Hopp, Christine S., Tran, Tuan M., Li, Shanping, Niangaly, Moussa, Cisse, Hamidou, Doumtabe, Didier, Skinner, Jeff, Sturdevant, Dan, Ricklefs, Stacy, Virtaneva, Kimmo, Asghar, Muhammad, Homann, Manijeh Vafa, Turner, Louise, Martins, Joana, Allman, Erik L., N’Dri, Marie-Esther, Winkler, Volker, Llinás, Manuel, Lavazec, Catherine, Martens, Craig, Färnert, Anna, Kayentao, Kassoum, Ongoiba, Aissata, Lavstsen, Thomas, Osório, Nuno S., Otto, Thomas D., Recker, Mario, Traore, Boubacar, Crompton, Peter D., and Portugal, Silvia
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- 2020
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32. Plasmodium falciparum-Specific Memory B-Cell and Antibody Responses Are Associated With Immunity in Children Living in an Endemic Area of Kenya
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Peter Jahnmatz, Diana Nyabundi, Christopher Sundling, Linnea Widman, Jedidah Mwacharo, Jennifer Musyoki, Edward Otieno, Niklas Ahlborg, Philip Bejon, Francis M. Ndungu, and Anna Färnert
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P.falciparum malaria ,recombinant antigens ,memory B-cells ,antibodies ,FluoroSpot ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Identifying the mechanism of naturally acquired immunity against Plasmodium falciparum malaria could contribute to the design of effective malaria vaccines. Using a recently developed multiplexed FluoroSpot assay, we assessed cross-sectional pre-existing memory B-cells (MBCs) and antibody responses against six well known P. falciparum antigens (MSP-119, MSP-2 (3D7), MSP-2 (FC27), MSP-3, AMA-1 and CSP) and measured their associations with previous infections and time to clinical malaria in the ensuing malaria season in Kenyan children. These children were under active weekly surveillance for malaria as part of a long-term longitudinal malaria immunology cohort study, where they are recruited from birth. After performing Cox regression analysis, we found that children with a breadth of three or more antigen-specific MBC or antibody responses at the baseline had a reduced risk for malaria in the ensuing P. falciparum transmission season. Specifically, MBC responses against AMA-1, MSP-2 (3D7) and MSP-3, as well as antibody responses to MSP-2 (3D7) and MSP-3 were prospectively associated with a reduced risk for malaria. The magnitude or breadth of MBC responses were however not correlated with the cumulative number of malaria episodes since birth. We conclude that increased breadth for merozoite antigen-specific MBC and antibody responses is associated with protection against malaria.
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- 2022
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33. The accuracy of fully automated algorithms for surveillance of healthcare-onset Clostridioides difficile infections in hospitalized patients
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Suzanne Desirée van der Werff, Mikael Fritzing, Hideyuki Tanushi, Aron Henriksson, Hercules Dalianis, Anders Ternhag, Anna Färnert, and Pontus Nauclér
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Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
We developed and validated a set of fully automated surveillance algorithms for healthcare-onset CDI using electronic health records. In a validation data set of 750 manually annotated admissions, the algorithm based on International Classification of Disease, Tenth Revision (ICD-10) code A04.7 had insufficient sensitivity. Algorithms based on microbiological test results with or without addition of symptoms performed well.
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- 2022
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34. Pregnancy and CYP3A5 Genotype Affect Day 7 Plasma Lumefantrine Concentrations
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Mutagonda, Ritah F., Minzi, Omary M.S., Massawe, Siriel N., Asghar, Muhammad, Färnert, Anna, Kamuhabwa, Appolinary A.R., and Aklillu, Eleni
- Published
- 2019
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35. Airway antibodies emerge according to COVID-19 severity and wane rapidly but reappear after SARS-CoV-2 vaccination
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Alberto Cagigi, Meng Yu, Björn Österberg, Julia Svensson, Sara Falck-Jones, Sindhu Vangeti, Eric Åhlberg, Lida Azizmohammadi, Anna Warnqvist, Ryan Falck-Jones, Pia C. Gubisch, Mert Ödemis, Farangies Ghafoor, Mona Eisele, Klara Lenart, Max Bell, Niclas Johansson, Jan Albert, Jörgen Sälde, Deleah D. Pettie, Michael P. Murphy, Lauren Carter, Neil P. King, Sebastian Ols, Johan Normark, Clas Ahlm, Mattias N. Forsell, Anna Färnert, Karin Loré, and Anna Smed-Sörensen
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COVID-19 ,Immunology ,Medicine - Abstract
Understanding the presence and durability of antibodies against SARS-CoV-2 in the airways is required to provide insights into the ability of individuals to neutralize the virus locally and prevent viral spread. Here, we longitudinally assessed both systemic and airway immune responses upon SARS-CoV-2 infection in a clinically well-characterized cohort of 147 infected individuals representing the full spectrum of COVID-19 severity, from asymptomatic infection to fatal disease. In addition, we evaluated how SARS-CoV-2 vaccination influenced the antibody responses in a subset of these individuals during convalescence as compared with naive individuals. Not only systemic but also airway antibody responses correlated with the degree of COVID-19 disease severity. However, although systemic IgG levels were durable for up to 8 months, airway IgG and IgA declined significantly within 3 months. After vaccination, there was an increase in both systemic and airway antibodies, in particular IgG, often exceeding the levels found during acute disease. In contrast, naive individuals showed low airway antibodies after vaccination. In the former COVID-19 patients, airway antibody levels were significantly elevated after the boost vaccination, highlighting the importance of prime and boost vaccinations for previously infected individuals to obtain optimal mucosal protection.
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- 2021
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36. Author Correction: Increased circulation time of Plasmodium falciparum underlies persistent asymptomatic infection in the dry season
- Author
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Andrade, Carolina M., Fleckenstein, Hannah, Thomson-Luque, Richard, Doumbo, Safiatou, Lima, Nathalia F., Anderson, Carrie, Hibbert, Julia, Hopp, Christine S., Tran, Tuan M., Li, Shanping, Niangaly, Moussa, Cisse, Hamidou, Doumtabe, Didier, Skinner, Jeff, Sturdevant, Dan, Ricklefs, Stacy, Virtaneva, Kimmo, Asghar, Muhammad, Homann, Manijeh Vafa, Turner, Louise, Martins, Joana, Allman, Erik L., N’Dri, Marie-Esther, Winkler, Volker, Llinás, Manuel, Lavazec, Catherine, Martens, Craig, Färnert, Anna, Kayentao, Kassoum, Ongoiba, Aissata, Lavstsen, Thomas, Osório, Nuno S., Otto, Thomas D., Recker, Mario, Traore, Boubacar, Crompton, Peter D., and Portugal, Silvia
- Published
- 2022
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37. A panel of recombinant proteins from human-infective Plasmodium species for serological surveillance
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Nicole Müller-Sienerth, Jarrod Shilts, Khamisah Abdul Kadir, Victor Yman, Manijeh Vafa Homann, Muhammad Asghar, Billy Ngasala, Balbir Singh, Anna Färnert, and Gavin J. Wright
- Subjects
Plasmodium ,Serology ,Antigen ,Recombinant protein ,Antibody ,Malaria ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Malaria remains a global health problem and accurate surveillance of Plasmodium parasites that are responsible for this disease is required to guide the most effective distribution of control measures. Serological surveillance will be particularly important in areas of low or periodic transmission because patient antibody responses can provide a measure of historical exposure. While methods for detecting host antibody responses to Plasmodium falciparum and Plasmodium vivax are well established, development of serological assays for Plasmodium knowlesi, Plasmodium ovale and Plasmodium malariae have been inhibited by a lack of immunodiagnostic candidates due to the limited availability of genomic information. Methods Using the recently completed genome sequences from P. malariae, P. ovale and P. knowlesi, a set of 33 candidate cell surface and secreted blood-stage antigens was selected and expressed in a recombinant form using a mammalian expression system. These proteins were added to an existing panel of antigens from P. falciparum and P. vivax and the immunoreactivity of IgG, IgM and IgA immunoglobulins from individuals diagnosed with infections to each of the five different Plasmodium species was evaluated by ELISA. Logistic regression modelling was used to quantify the ability of the responses to determine prior exposure to the different Plasmodium species. Results Using sera from European travellers with diagnosed Plasmodium infections, antigens showing species-specific immunoreactivity were identified to select a panel of 22 proteins from five Plasmodium species for serological profiling. The immunoreactivity to the antigens in the panel of sera taken from travellers and individuals living in malaria-endemic regions with diagnosed infections showed moderate power to predict infections by each species, including P. ovale, P. malariae and P. knowlesi. Using a larger set of patient samples and logistic regression modelling it was shown that exposure to P. knowlesi could be accurately detected (AUC = 91%) using an antigen panel consisting of the P. knowlesi orthologues of MSP10, P12 and P38. Conclusions Using the recent availability of genome sequences to all human-infective Plasmodium spp. parasites and a method of expressing Plasmodium proteins in a secreted functional form, an antigen panel has been compiled that will be useful to determine exposure to these parasites.
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- 2020
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38. Antibody-Dependent Respiratory Burst against Plasmodium falciparum Merozoites in Individuals Living in an Area with Declining Malaria Transmission
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Mutemi, Doreen D., primary, Tuju, James, additional, Ogwang, Rodney, additional, Nyamako, Lydia, additional, Wambui, Kennedy M., additional, Cruz, Ivette R., additional, Villner, Pär, additional, Yman, Victor, additional, Kinyanjui, Samson M., additional, Rooth, Ingegerd, additional, Ngasala, Billy, additional, Färnert, Anna, additional, and Osier, Faith H. A., additional
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- 2024
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39. Disease‐specific plasma protein profiles in patients with fever after traveling to tropical areas
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Sundling, Christopher, primary, Yman, Victor, additional, Mousavian, Zaynab, additional, Angenendt, Sina, additional, Foroogh, Fariba, additional, von Horn, Ellen, additional, Lautenbach, Maximilian Julius, additional, Grunewald, Johan, additional, Färnert, Anna, additional, and Sondén, Klara, additional
- Published
- 2024
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40. Antibody-Dependent Respiratory Burst against Plasmodium falciparum Merozoites in Individuals Living in an Area with Declining Malaria Transmission
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Mutemi, Doreen David, primary, Tuju, James, additional, Ogwang, Rodney, additional, Nyamako, Lydia, additional, Wambui, Kennedy Mwai, additional, Cruz, Ivette Raices, additional, Villner, Pär, additional, Yman, Victor, additional, Kinyanjui, Samson Muchina, additional, Rooth, Ingegerd, additional, Ngasala, Billy, additional, Färnert, Anna, additional, and Osier, Faith, additional
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- 2024
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41. Comparing Serum and Plasma Samples in the Performance of Commercial Igg Elisa-Based Assays for Diagnosis of Schistosoma- and Strongyloides Infection
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Bujila, Ioana, primary, Eliasson, Isabelle, additional, Bång, Emmeli, additional, Färnert, Anna, additional, and Rönnberg, Caroline, additional
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- 2024
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42. Regulation of B‐cell function and expression of CD11c, T‐bet, and FcRL5 in response to different activation signals.
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Kleberg, Linn, Courey‐Ghaouzi, Alan‐Dine, Lautenbach, Maximilian Julius, Färnert, Anna, and Sundling, Christopher
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PLASMA cells ,B cells ,CELL differentiation ,MALARIA ,SECRETION - Abstract
CD11c, FcRL5, or T‐bet are commonly expressed by B cells expanding during inflammation, where they can make up >30% of mature B cells. However, the association between the proteins and differentiation and function in the host response remains largely unclear. We have assessed the co‐expression of CD11c, T‐bet, and FcRL5 in an in vitro B‐cell culture system to determine how stimulation via the BCR, toll‐like receptor 9 (TLR9), and different cytokines influence CD11c, T‐bet, and FcRL5 expression. We observed different expression dynamics for all markers, but a largely overlapping regulation of CD11c and FcRL5 in response to BCR and TLR9 activation, while T‐bet was strongly dependent on IFN‐γ signaling. Investigating plasma cell differentiation and APC functions, there was no association between marker expression and antibody secretion or T‐cell help. Rather the functions were associated with TLR9‐signalling and B‐cell‐derived IL‐6 production, respectively. These results suggest that the expression of CD11c, FcRL5, and T‐bet and plasma cell differentiation and improved APC functions occur in parallel and are regulated by similar activation signals, but they are not interdependent. [ABSTRACT FROM AUTHOR]
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- 2024
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43. Comparing serum and plasma samples in the performance of Bordier Affinity IgG ELISA-based assays for diagnosis of Schistosoma- and Strongyloides infection
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Bujila, Ioana, Eliasson, Isabelle, Bång, Emmeli, Färnert, Anna, and Rönnberg, Caroline
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- 2024
- Full Text
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44. The Malaria-Protective Human Glycophorin Structural Variant DUP4 Shows Somatic Mosaicism and Association with Hemoglobin Levels
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Algady, Walid, Louzada, Sandra, Carpenter, Danielle, Brajer, Paulina, Färnert, Anna, Rooth, Ingegerd, Ngasala, Billy, Yang, Fengtang, Shaw, Marie-Anne, and Hollox, Edward J.
- Published
- 2018
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45. Memory B-Cell Responses Against Merozoite Antigens After Acute Plasmodium falciparum Malaria, Assessed Over One Year Using a Novel Multiplexed FluoroSpot Assay
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Peter Jahnmatz, Christopher Sundling, Victor Yman, Linnea Widman, Muhammad Asghar, Klara Sondén, Christine Stenström, Christian Smedman, Francis Ndungu, Niklas Ahlborg, and Anna Färnert
- Subjects
antibody ,memory B-cell ,FluoroSpot ,P. falciparum malaria ,recombinant proteins ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Memory B cells (MBCs) are believed to be important for the maintenance of immunity to malaria, and these cells need to be explored in the context of different parasite antigens and their breadth and kinetics after natural infections. However, frequencies of antigen-specific MBCs are low in peripheral blood, limiting the number of antigens that can be studied, especially when small blood volumes are available. Here, we developed a multiplexed reversed B-cell FluoroSpot assay capable of simultaneously detecting MBCs specific for the four Plasmodium falciparum blood-stage antigens, MSP-119, MSP-2, MSP-3 and AMA-1. We used the assay to study the kinetics of the MBC response after an acute episode of malaria and up to one year following treatment in travelers returning to Sweden from sub-Saharan Africa. We show that the FluoroSpot assay can detect MBCs to all four merozoite antigens in the same well, and that the breadth and kinetics varied between individuals. We further found that individuals experiencing a primary infection could mount and maintain parasite-specific MBCs to a similar extent as previously exposed adults, already after a single infection. We conclude that the multiplexed B-cell FluoroSpot is a powerful tool for assessing antigen-specific MBC responses to several antigens simultaneously, and that the kinetics of MBC responses against merozoite surface antigens differ over the course of one year. These findings contribute to the understanding of acquisition and maintenance of immune responses to malaria.
- Published
- 2021
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46. Enhanced virulence of Plasmodium falciparum in blood of diabetic patients.
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Jun-Hong Ch'ng, Kirsten Moll, Katja Wyss, Ulf Hammar, Mikael Rydén, Olle Kämpe, Anna Färnert, and Mats Wahlgren
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Medicine ,Science - Abstract
Rising prevalence of diabetes in sub-Saharan Africa, coupled with continued malaria transmission, has resulted more patients dealing with both communicable and non-communicable diseases. We previously reported that travelers with type 2 diabetes mellitus (T2DM) infected with Plasmodium falciparum were three times more likely to develop severe malaria than non-diabetics. Here we explore the biological basis for this by testing blood from uninfected subjects with type 1 and type 2 diabetes, ex vivo, for their effects on parasite growth and rosetting (binding of infected erythrocytes to uninfected erythrocytes). Rosetting was associated with type 2 diabetes, blood glucose and erythrocyte sedimentation rate (ESR), while parasite growth was positively associated with blood glucose, glycated hemoglobin (HbA1c), body mass index (BMI), fibrinogen and triglycerides. This study establishes a link between diabetes and malaria virulence assays, potentially explaining the protective effect of good glycemic control against severe malaria in subjects with diabetes.
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- 2021
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47. Correction: Profiles of Plasmodium falciparum infections detected by microscopy through the first year of life in Kintampo a high transmission area of Ghana.
- Author
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Akua Kyerewaa Botwe, Seth Owusu-Agyei, Muhammad Asghar, Ulf Hammar, Felix Boakye Oppong, Stephaney Gyaase, David Dosoo, Gabriel Jakpa, Ellen Boamah, Mieks Frenken Twumasi, Faith Osier, Anna Färnert, and Kwaku Poku Asante
- Subjects
Medicine ,Science - Abstract
[This corrects the article DOI: 10.1371/journal.pone.0240814.].
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- 2021
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48. Antibody responses to merozoite antigens after natural Plasmodium falciparum infection: kinetics and longevity in absence of re-exposure
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Victor Yman, Michael T. White, Muhammad Asghar, Christopher Sundling, Klara Sondén, Simon J. Draper, Faith H. A. Osier, and Anna Färnert
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Antibody ,Half-life ,Longevity ,Traveller ,Longitudinal ,Malaria ,Medicine - Abstract
Abstract Background Antibodies against merozoite antigens are key components of malaria immunity. The naturally acquired antibody response to these antigens is generally considered short-lived; however, the underlying mechanisms remain unclear. Prospective studies of travellers with different levels of prior exposure, returning to malaria-free countries with Plasmodium infection, offer a unique opportunity to investigate the kinetics and composition of the antibody response after natural infection. Methods Adults diagnosed with P. falciparum malaria in Stockholm, Sweden (20 likely malaria naïve and 41 with repeated previous exposure during residency in sub-Saharan Africa) were sampled at diagnosis and 10 days and 1, 3, 6, and 12 months after treatment. Total and subclass-specific IgG responses to P. falciparum merozoite antigens (AMA-1, MSP-119, MSP-2, MSP-3, and RH5) and tetanus toxoid were measured by multiplex bead-based immunoassays and ELISA. Mathematical modelling was used to estimate the exposure-dependent longevity of antibodies and antibody-secreting cells (ASCs). Results A majority of individuals mounted detectable antibody responses towards P. falciparum merozoite antigens at diagnosis; however, the magnitude and breadth were greater in individuals with prior exposure. In both exposure groups, antibody levels increased rapidly for 2 weeks and decayed thereafter. Previously exposed individuals maintained two- to ninefold greater antibody levels throughout the 1-year follow-up. The half-lives of malaria-specific long-lived ASCs, responsible for maintaining circulating antibodies, ranged from 1.8 to 3.7 years for merozoite antigens and were considerably short compared to tetanus-specific ASCs. Primary infected individuals did acquire a long-lived component of the antibody response; however, the total proportion of long-lived ASCs generated in response to infection was estimated not to exceed 10%. In contrast, previously exposed individuals maintained substantially larger numbers of long-lived ASCs (10–56% of total ASCs). Conclusion The short-lived nature of the naturally acquired antibody response, to all tested merozoite antigens, following primary malaria infection can be attributed to a combination of a poor acquisition and short half-life of long-lived ASCs. Greater longevity is acquired with repeated infections and can be explained by the maintenance of larger numbers of long-lived ASCs. These insights advance our understanding of naturally acquired malaria immunity and will guide strategies for further development of both vaccines and serological tools to monitor exposure.
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- 2019
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49. Cutaneous, mucocutaneous and visceral leishmaniasis in Sweden from 1996–2016: a retrospective study of clinical characteristics, treatments and outcomes
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Hedvig Glans, Leif Dotevall, Sara Karlsson Söbirk, Anna Färnert, and Maria Bradley
- Subjects
Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Leishmaniasis is a neglected and poorly reported parasitic infection transmitted by sand flies in tropical and subtropical regions. Knowledge about leishmaniasis has become important in non-endemic countries due to increased migration and travel. Few studies of the clinical management of cutaneous, mucocutaneous and visceral leishmaniasis in non-endemic regions have been published to date. In this study, we aimed to evaluate patient characteristics, clinical manifestations and treatments of leishmaniasis in Sweden, over a 20-year period. Methods A retrospective observational nationwide study was performed using medical records of patients diagnosed with leishmaniasis in Sweden from 1996 to 2016. Cases with culture and polymerase chain reaction verified leishmaniasis were identified at the Public Health Agency of Sweden. Results In total, 165 cases of leishmaniasis were diagnosed from 1996 to 2016. Medical records from 156 patients (95%) were available for review and included in the study. Cutaneous leishmaniasis was the dominant manifestation (n = 149, 96%), and in 66 patients (44%) cutaneous leishmaniasis was due to Leishmania tropica. Other manifestations were mucocutaneous (n = 4, 3%), visceral (n = 2, 1%) and post-kala-azar dermal leishmaniasis (n = 1, 1%). During this time period, the number of cases increased, especially after 2013. Most patients (n = 81, 52%) were migrants who were infected in their countries of origin (from 2013 to 2016, mainly Syria or Afghanistan). Other groups were Swedish tourists (25%) and returning workers (13%). The time from collection of the diagnostic sample to the start of treatment was less than one month in 81 (66%) patients and under three months in 124 patients (96%). Among the 149 patients with cutaneous leishmaniasis, 125 patients received antileishmanial treatment, and in 88 of these patients (70%) cure was achieved, regardless of treatment. Conclusions The number of leishmaniasis cases diagnosed in Sweden increased between 1996 and 2016, mainly in migrants from endemic countries. Although leishmaniasis is a rare disease in Sweden, patients appear to be diagnosed early and treated according to current European guidelines, resulting in an overall high cure rate.
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- 2018
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50. Liver Injury in Uncomplicated Malaria is an Overlooked Phenomenon: An Observational StudyResearch in context
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Isaie J. Reuling, Gerdie M. de Jong, Xi Zen Yap, Muhammad Asghar, Jona Walk, Lisanne A. van de Schans, Rob Koelewijn, Anna Färnert, Quirijn de Mast, Andre J. van der Ven, Teun Bousema, Jaap J. van Hellemond, Perry J.J. van Genderen, and Robert W. Sauerwein
- Subjects
Medicine ,Medicine (General) ,R5-920 - Abstract
Background: Liver injury is a known feature of severe malaria, but is only incidentally investigated in uncomplicated disease. In such cases, drug-induced hepatotoxicity is often thought to be the primary cause of the observed liver injury, and this can be a major concern in antimalaria drug development. We investigated liver function test (LFT) abnormalities in patients with imported uncomplicated malaria, and in Controlled Human Malaria Infection (CHMI) studies. Methods: Clinical and laboratory data from 484 imported malaria cases and 254 CHMI participants were obtained from the Rotterdam Malaria Cohort database, and the Radboud University Medical Center database (between 2001 and 2017), respectively. Routine clinical LFTs, clinical profiles, parasite densities, hematological, and inflammation parameters were assessed in 217 patients with imported falciparum malaria upon admission, and from longitudinal data of 187 CHMI participants. Findings: Upon admission, the proportion of patients with imported uncomplicated malaria and elevated liver enzymes was 128/186 (69%). In CHMI, 97/187 (52%) participants showed LFT abnormalities, including mild (64%, >1.0 ≤ 2.5× upper limit of normal (ULN)), moderate (20%, >2.5 ≤ 5.0xULN) or severe (16%, >5.0xULN). LFT abnormalities were primarily ALT/AST elevations and to a lesser extent γGT and ALP. LFT abnormalities peaked shortly after initiation of treatment, regardless of drug regimen, and returned to normal within three to six weeks. Positive associations were found with parasite burden and inflammatory parameters, including cumulative inflammatory cytokine responses and oxidative stress markers (r = 0·65, p = 0·008, and r = −0·63, p = 0·001, respectively). Interpretation: This study shows that reversible liver injury is a common feature of uncomplicated falciparum malaria, most likely caused by an enduring pro-inflammatory response post treatment. The recognition of this phenomenon is of clinical relevance for individual patient care as well as clinical development of (new) antimalarial drugs. Fund: PATH Malaria Vaccine Initiative (MVI) Keywords: Malaria, Liver injury, Pathogenesis, Inflammation, Oxidative stress
- Published
- 2018
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