267 results on '"Hall SD"'
Search Results
2. Physiologically based pharmacokinetic modeling in drug discovery and development: A pharmaceutical industry perspective
- Author
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Jones, HM, primary, Chen, Y, additional, Gibson, C, additional, Heimbach, T, additional, Parrott, N, additional, Peters, SA, additional, Snoeys, J, additional, Upreti, VV, additional, Zheng, M, additional, and Hall, SD, additional
- Published
- 2015
- Full Text
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3. Modulation of oscillatory gamma during anticipation and perception of pain using Magnetoencephalography
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Rossiter, HE, primary, Worthen, SF, additional, Hall, SD, additional, and Furlong, PL, additional
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- 2009
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4. The pharmacokinetics of piroxicam in elderly persons with and without renal impairment.
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Rudy, AC, primary, Figueroa, NL, additional, Hall, SD, additional, and Brater, DC, additional
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- 1994
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5. Stereoselective disposition of flurbiprofen in uraemic patients.
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Knadler, MP, primary, Brater, DC, additional, and Hall, SD, additional
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- 1992
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6. Stereoselective disposition of flurbiprofen in normal volunteers.
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Knadler, MP, primary, Brater, DC, additional, and Hall, SD, additional
- Published
- 1992
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7. Effects of flurbiprofen on renal function in patients with moderate renal insufficiency.
- Author
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Murray, MD, primary, Greene, PK, additional, Brater, DC, additional, Manatunga, AK, additional, and Hall, SD, additional
- Published
- 1992
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8. Enriching amnestic mild cognitive impairment populations for clinical trials: optimal combination of biomarkers to predict conversion to dementia.
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Yu P, Dean RA, Hall SD, Qi Y, Sethuraman G, Willis BA, Siemers ER, Martenyi F, Tauscher JT, Schwarz AJ, Yu, Peng, Dean, Robert A, Hall, Stephen D, Qi, Yuan, Sethuraman, Gopalan, Willis, Brian A, Siemers, Eric R, Martenyi, Ferenc, Tauscher, Johannes T, and Schwarz, Adam J
- Abstract
The goal of this study was to identify the optimal combination of magnetic resonance imaging (MRI), [18F]-fluorodeoxyglucose positron emission tomography (FDG-PET), and cerebrospinal fluid (CSF) biomarkers to predict conversion from amnestic mild cognitive impairment (aMCI) to Alzheimer's disease (AD) dementia within two years, for enriching clinical trial populations. Data from 63 subjects in the Alzheimer's Disease Neuroimaging Initiative aMCI cohort who had MRI and FDG-PET imaging along with CSF data at baseline and at least two years clinical follow-up were used. A Bayesian classification method was used to determine which combination of 31 variables (MRI, FDG-PET, CSF measurements, apolipoprotein E (ApoE) genotype, and cognitive scores) provided the most accurate prediction of aMCI to AD conversion. The cost and time trade-offs for the use of these biomarkers as inclusion criteria in clinical trials were evaluated. Using the combination of all biomarkers, ApoE genotype, and cognitive scores, we achieved an accuracy of 81% in predicting aMCI to AD conversion. With only ApoE genotype and cognitive scores, the prediction accuracy decreased to 62%. By comparing individual modalities, we found that MRI measures had the best predictive power (accuracy = 78%), followed by ApoE, FDG-PET, CSF, and the Alzheimer's disease assessment scale-cognitive subscale. The combination of biomarkers from different modalities, measuring complementary aspects of AD pathology, provided the most accurate prediction of aMCI to AD conversion within two years. This was predominantly driven by MRI measures, which emerged as the single most powerful modality. Overall, the combination of MRI, ApoE, and cognitive scores provided the best trade-off between cost and time compared with other biomarker combinations for patient recruitment in clinical trial. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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9. Drug-induced QT Prolongation in Cirrhotic Patients With Transjugular Intrahepatic Portosystemic Shunt.
- Author
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Vuppalanchi R, Juluri R, Ghabril M, Kim S, Thong N, Gorski JC, Chalasani N, and Hall SD
- Published
- 2011
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10. Perceptual and acoustic reliability estimates for the Speech Disorders Classification System (SDCS)
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Shriberg LD, Fourakis M, Hall SD, Karlsson HB, Lohmeier HL, McSweeny JL, Potter NL, Scheer-Cohen AR, Strand EA, Tilkens CM, and Wilson DL
- Abstract
A companion paper describes three extensions to a classification system for paediatric speech sound disorders termed the Speech Disorders Classification System (SDCS). The SDCS uses perceptual and acoustic data reduction methods to obtain information on a speaker's speech, prosody, and voice. The present paper provides reliability estimates for the two perceptual methods (narrowphonetic transcription; prosody-voice coding) and the acoustic analysismethods theSDCSuses to describe and classify a speaker's speech competence, precision, and stability. Speech samples from 10 speakers, five with significant motor speech disorder and five with typical speech, were re-measured to estimate intra-judge and inter-judge agreement for the perceptual and acousticmethods. Each of the speakers completed five speech tasks (total ¼ 50 datasets), ranging in articulatory difficulty for the speakers, with consequences for the difficulty level of data reduction. Point-to-point percentage of agreement findings for the two perceptual methods were as high or higher than reported in literature reviews and from previous studies conducted within the laboratory. Percentage of agreement findings for the acoustics tasks of segmenting phonemes, editing fundamental frequency tracks, and estimating formants ranged from values in the mid 70%to 100%, with most estimates in the mid 80% to mid 90% range. Findings are interpreted as support for the perceptual and acoustic methods used in the SDCS to describe and classify speakers with speech sound disorders. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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11. Extensions to the Speech Disorders Classification System (SDCS)
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Shriberg LD, Fourakis M, Hall SD, Karlsson HB, Lohmeier HL, McSweeny JL, Potter NL, Scheer-Cohen AR, Strand EA, Tilkens CM, and Wilson DL
- Abstract
This report describes three extensions to a classification system for paediatric speech sound disorders termed the Speech Disorders Classification System (SDCS). Part I describes a classification extension to the SDCS to differentiate motor speech disorders from speech delay and to differentiate among three sub-types of motor speech disorders. Part II describes the Madison Speech Assessment Protocol (MSAP), an , 2-hour battery of 25 measures that includes 15 speech tests and tasks. Part III describes the Competence, Precision, and Stability Analytics (CPSA) framework, a current set of , 90 perceptual- and acoustic-based indices of speech, prosody, and voice used to quantify and classify sub-types of Speech Sound Disorders (SSD). A companion paper provides reliability estimates for the perceptual and acoustic data reduction methods used in the SDCS. The agreement estimates in the companion paper support the reliability of SDCS methods and illustrate the complementary roles of perceptual and acoustic methods in diagnostic analyses of SSD of unknown origin. Examples of research using the extensions to the SDCS described in the present report include diagnostic findings for a sample of youth with motor speech disorders associated with galactosemia, and a test of the hypothesis of apraxia of speech in a group of children with autism spectrum disorders. All SDCS methods and reference databases running in the PEPPER (Programs to Examine Phonetic and Phonologic Evaluation Records) environment will be disseminated without cost when complete. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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12. Exhaled air dispersion distances during noninvasive ventilation via different Respironics face masks.
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Hui DS, Chow BK, Ng SS, Chu LC, Hall SD, Gin T, Sung JJ, Chan MT, Hui, David S, Chow, Benny K, Ng, Susanna S, Chu, Leo C Y, Hall, Stephen D, Gin, Tony, Sung, Joseph J Y, and Chan, Matthew T V
- Abstract
Background: As part of our influenza pandemic preparedness, we studied the exhaled air dispersion distances and directions through two different face masks (Respironics; Murrysville, PA) attached to a human-patient simulator (HPS) during noninvasive positive-pressure ventilation (NPPV) in an isolation room with pressure of -5 Pa.Methods: The HPS was positioned at 45 degrees on the bed and programmed to mimic mild lung injury (oxygen consumption, 300 mL/min; lung compliance, 35 mL/cm H(2)O). Airflow was marked with intrapulmonary smoke for visualization. Inspiratory positive airway pressure (IPAP) started at 10 cm H(2)O and gradually increased to 18 cm H(2)O, whereas expiratory pressure was maintained at 4 cm H(2)O. A leakage jet plume was revealed by a laser light sheet, and images were captured by high definition video. Normalized exhaled air concentration in the plume was estimated from the light scattered by the smoke particles.Findings: As IPAP increased from 10 to 18 cm H(2)O, the exhaled air of a low normalized concentration through the ComfortFull 2 mask (Respironics) increased from 0.65 to 0.85 m at a direction perpendicular to the head of the HPS along the median sagittal plane. When the IPAP of 10 cm H(2)O was applied via the Image 3 mask (Respironics) connected to the whisper swivel, the exhaled air dispersed to 0.95 m toward the end of the bed along the median sagittal plane, whereas higher IPAP resulted in wider spread of a higher concentration of smoke.Conclusions: Substantial exposure to exhaled air occurs within a 1-m region, from patients receiving NPPV via the ComfortFull 2 mask and the Image 3 mask, with more diffuse leakage from the latter, especially at higher IPAP. [ABSTRACT FROM AUTHOR]- Published
- 2009
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13. Airflow and droplet spreading around oxygen masks: a simulation model for infection control research.
- Author
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Ip M, Tang JW, Hui DSC, Wong ALN, Chan MTV, Joynt GM, So ATP, Hall SD, Chan PKS, and Sung JJY
- Abstract
BACKGROUND: Respiratory assist devices, such as oxygen masks, may enhance the potential to spread infectious aerosols from patients with respiratory infections. METHODS: A technique was developed to visualize exhaled aerosols during simulated patients' use of oxygen masks in a health care setting and tested using the simple, the nonrebreathing, and the Venturi oxygen masks. A smoke tracer was introduced into one of the lungs of the model to enable it to mix with the incoming oxygen and then to be further inhaled/exhaled by the model according to a variety of realistic respiratory settings (14, 24, and 30 breaths per minute, with tidal volumes of 500, 330, 235 mL, respectively) and oxygen supply flow rates (between 6 and 15 liters per minute). Digital recordings of these exhaled airflow patterns allowed approximate distances to be estimated for the extent of the visible exhaled air plumes emitted from each oxygen mask type at these settings. RESULTS: It was found that the simple, the nonrebreathing, and the Venturi-type oxygen masks produced exhaled smoke plumes over minimum distances of 0.08 to 0.21 m, 0.23 to 0.36 m, and 0.26 to 0.40 m, respectively. CONCLUSION: Health care workers may therefore consider any area within at least 0.4 m of a patient using such oxygen masks to be a potential nosocomial hazard zone. [ABSTRACT FROM AUTHOR]
- Published
- 2007
14. Noninvasive positive-pressure ventilation: An experimental model to assess air and particle dispersion.
- Author
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Hui DS, Hall SD, Chan MT, Chow BK, Tsou JY, Joynt GM, Sullivan CE, Sung JJ, Hui, David S, Hall, Stephen D, Chan, Matthew T V, Chow, Benny K, Tsou, Jin Y, Joynt, Gavin M, Sullivan, Colin E, and Sung, Joseph J Y
- Abstract
Background: Health-care workers are concerned about the risk of acquiring contagious diseases such as severe acute respiratory syndrome and avian influenza after recent outbreaks. We studied exhaled air and particle dispersion through an oronasal mask attached to a human-patient simulator (HPS) during noninvasive positive-pressure ventilation (NPPV).Methods: Airflow was marked with intrapulmonary smoke for visualization. Therapy with inspiratory positive airway pressure (IPAP) was started at 10 cm H2O and gradually increased to 18 cm H2O, whereas expiratory positive airway pressure was maintained at 4 cm H2O. A leakage jet plume was revealed by a laser light sheet and images captured by video. Smoke concentration in the plume was estimated from the light scattered by smoke particles.Findings: A jet plume of air leaked through the mask exhaust holes to a radial distance of 0.25 m from the mask during the application of IPAP at 10 cm H2O with some leakage from the nasal bridge. The leakage plume exposure probability was highest about 60 to 80 mm lateral to the median sagittal plane of the HPS. Without nasal bridge leakage, the jet plume from the exhaust holes increased to a 0.40-m radius from the mask, whereas exposure probability was highest about 0.28 m above the patient. When IPAP was increased to 18 cm H2O, the vertical plume extended to 0.45 m above the patient with some horizontal spreading along the ward ceiling.Conclusion: Substantial exposure to exhaled air occurs within a 0.5-m radius of patients receiving NPPV. Medical wards should be designed with an architectural aerodynamics approach and knowledge of air/particle dispersion from common mechanical ventilatory techniques. [ABSTRACT FROM AUTHOR]- Published
- 2006
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15. Airflows around oxygen masks: A potential source of infection?
- Author
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Hui DS, Ip M, Tang JW, Wong AL, Chan MT, Hall SD, Chan PK, Sung JJ, Hui, David S, Ip, Margaret, Tang, Julian W, Wong, Alexandra L N, Chan, Matthew T V, Hall, Stephen D, Chan, Paul K S, and Sung, Joseph J Y
- Abstract
Patients with respiratory infections often require the use of supplemental oxygen via oxygen masks, which, in the hospital, may become sources of aerosolized infectious pathogens. To assess this risk, a human lung model (respiration rate, 12 breaths/min) was designed to test the potential for a simple oxygen mask at a common setting (4 L/min) to disperse potentially infectious exhaled air into the surrounding area. A laser sheet was used to illuminate the exhaled air from the mask, which contained fine tracer smoke particles. An analysis of captured digital images showed that the exhaled air at the peak of simulated exhalation reached a distance of approximately 0.40 m. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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16. Rural and urban death rates by race/ethnicity and gender, Texas: 1990 and 2000.
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McGehee MA, Hall SD, and Murdock SH
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Objectives: The health status of rural and urban residents is examined for 1990 and 2000. Methods: Age-adjusted mortality rates were calculated for all causes of deaths as well as for five selected causes of death by race/ethnicity and gender for non metropolitan and metropolitan counties in Texas. Results: Rural residents in Texas experienced higher death rates for 1990 and 2000 than their urban counterparts and also experienced smaller decreases in the rates than their counterparts during the 10-year period. Conclusions: The disadvantaged position of nonmetropolitan residents in Texas places them at a greater risk of low health status. [ABSTRACT FROM AUTHOR]
- Published
- 2004
17. The levels of the long non-coding RNA MALAT1 affect cell viability and modulate TDP-43 binding to mRNA in the nucleus.
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Balaji A, Button AC, Hall SD, Zhu J, Ellis L, Lavorando E, Ashley EL, Johnson R, Sarikhani E, Jahed Z, and McHugh CA
- Abstract
TAR DNA-binding protein (TDP-43) and Metastasis Associated Lung Adenocarcinoma Transcript (MALAT1) RNA are both abundantly expressed in the human cell nucleus. Increased interaction of TDP-43 and MALAT1, as well as dysregulation of TDP-43 function, was previously identified in brain samples from patients with neurodegenerative disease compared to healthy brain tissues. We hypothesized that TDP-43 function may depend in part on MALAT1 expression levels. Here, we find that alterations in MALAT1 expression affect cell viability and can modulate TDP-43 binding to other mRNAs in HEK293 and SH-SH5Y human cell lines. Disruption of either MALAT1 or TDP-43 expression induces cell death, indicating that both macromolecules contribute positively to survival. Depletion of MALAT1 RNA results in increased binding of TDP-43 to other mRNA transcripts at the 3' UTR. Finally, we examined the contribution of MALAT1 expression to survival in a cell culture model of neurodegeneration using MPP
+ treatment in SH-SY5Y cells. Depletion of MALAT1 RNA protects against toxicity in a cellular model of neurodegeneration and modulates TDP-43 binding to mRNA transcripts involved in apoptotic cell death. Taken together, we find that MALAT1 RNA and TDP-43 interactions can affect mRNA levels and cell viability. A tightly regulated network of non-coding RNA, messenger RNA, and protein interactions could provide a mechanism to maintain appropriate RNA expression levels and contribute to neuronal function., Competing Interests: Conflicts of Interest The authors declare that they have no conflicts of interest with the contents of this article., (Copyright © 2025 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2025
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18. Characterising the inconsistency between perceived and actual sleep and its impact upon cognition and mood.
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Windmill H, Dyer A, Smith AD, Roser ME, Dhanda A, and Hall SD
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- Humans, Male, Female, Adult, Actigraphy, Young Adult, Sleep Quality, Memory, Short-Term physiology, Middle Aged, Cognition physiology, Affect physiology, Sleep physiology
- Abstract
Sleep profoundly influences human behaviour across cognition, affect, and daily experience. This study evaluated how subjective reports and objective measures of sleep capture the interaction between sleep quality and quantity on cognition and affect. We collected subjective sleep reports using the Pittsburgh Sleep Quality Index and objective seven-day actigraphy recordings from 83 participants. A test battery, including the Stop Signal, Digit Span, and Emotional Bias Tasks, measured response inhibition, working memory, and affect. Mood was evaluated using the Positive and Negative Affect Schedule, State-Trait Anxiety Inventory, and Beck's Anxiety Inventory. We reveal that subjective sleep reports do not predict objectively measured sleep duration or quality. We demonstrate that objective measures predict cognitive performance on executive function and memory tasks for the upper and lower sleep quartiles, while subjective reports do not. Moreover, we demonstrate that subjective reports, but not objective measures, are strongly predicted by emotional state. These findings suggest that while subjective measures do not accurately index actual sleep, they are a reliable proxy for emotional well-being. We propose that combined subjective and objective measures are required to characterise the multifaceted interaction between sleep, cognition and emotion. We discuss the implications of these findings for understanding the cause-effect relationship of sleep-disturbance in neurological and psychiatric disorders., (© 2024. The Author(s).)
- Published
- 2024
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19. Characterising the anxiogenic network from functional connectivity analysis of the CO 2 challenge model.
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Graham D, Mathew S, Marsden J, Smith AD, Smerdon G, and Hall SD
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- Humans, Male, Adult, Female, Young Adult, Brain Mapping methods, Brain diagnostic imaging, Brain physiology, Nerve Net diagnostic imaging, Nerve Net physiology, Carbon Dioxide administration & dosage, Magnetic Resonance Imaging methods, Anxiety physiopathology
- Abstract
The CO
2 challenge model (CCM) is a gas inhalation paradigm that provides precisely controlled anxiety induction in experimental settings. Despite its potential as an experimental model of anxiety, our understanding of the neural effects of the CCM is incomplete. This study employs resting-state functional magnetic resonance imaging (rs-fMRI) to explore functional connectivity (FC) changes underlying the CCM. Following a preliminary CO2 tolerance assessment, participants completed an MRI session that included three rs-fMRI scans: during inhalation of control air (pre and post), and during a 6% CCM exposure. Here, we confirm that 6% CCM is a tolerable anxiogenic model in the MRI setting. We demonstrate that a transient CCM-induced increase in subjective anxiety is associated with an increase in FC within limbic and anxiety-related regions, with the insula emerging as a central node in this altered connectivity pattern. Further analysis revealed a significant correlation between the levels of subjective anxiety and enhanced FC between the brainstem and medial frontal cortex, highlighting the dynamic role of the brainstem in response to CO2 -induced anxiety. These findings underscore the value of combining CCM and rs-fMRI to characterise the neural mechanisms of anxiety, with important implications for evaluating potential therapeutic interventions., Competing Interests: Declarations. Competing interests: The authors declare no competing interests., (© 2024. The Author(s).)- Published
- 2024
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20. Heterotropic Allosteric Modulation of CYP3A4 In Vitro by Progesterone: Evidence for Improvement in Prediction of Time Dependent Inhibition for Macrolides.
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Rougee LRA, Hegde PV, Shin K, Abraham TL, Bell A, and Hall SD
- Abstract
Predictions of drug-drug interactions resulting from time-dependent inhibition (TDI) of CYP3A4 have consistently overestimated or mis-predicted (i.e. false positives) the interaction that is observed in vivo. Recent findings demonstrated that the presence of the allosteric modulator progesterone (PGS) in the in vitro assay could alter the in vitro kinetics of CYP3A4 TDI with inhibitors that interact with the heme moiety, such as metabolic-intermediate complex (MIC) forming inhibitors. The impact of the presence of 100 µM PGS on the TDI of molecules in the class of macrolides typically associated with MIC formation was investigated. Presence of PGS resulted in varied responses across the inhibitors tested. The TDI signal was eliminated for five inhibitors, and unaltered in the case of one, fidaxomicin. The remaining molecules erythromycin, clarithromycin, and troleandomycin, were observed to have a decrease in both potency and maximum inactivation rate ranging from 1.7-fold to 6.7-fold. These changes in TDI kinetics led to a >90% decrease in inactivation efficiency. In order to determine in vitro conditions that could reproduce in vivo inhibition, varied concentrations of PGS were incubated with clarithromycin and erythromycin. Resulting in vitro TDI kinetics were incorporated into dynamic physiologically-based pharmacokinetic (PBPK) models to predict clinically observed interactions. The results suggested that a concentration of ~45 µM PGS would result in TDI kinetic values that could reproduce in vivo observations and could potentially improve predictions for CYP3A4 TDI. Significance Statement The impact of the allosteric heterotropic modulator progesterone on the CYP3A4 time-dependent inhibition kinetics was quantified for a set of metabolic-intermediate complex forming mechanism-based inhibitors. We identify the in vitro conditions that optimally predict time-dependent inhibition for in vivo drug-drug interactions through dynamic physiologically-based pharmacokinetic modeling. The optimized assay conditions improve in vitro to in vivo translation and prediction of time-dependent inhibition., (Copyright © 2024 American Society for Pharmacology and Experimental Therapeutics.)
- Published
- 2024
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21. Identification of a Safe and Tolerable Carbamazepine Dosing Paradigm that Facilitates Effective Evaluation of CYP3A4 Induction.
- Author
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Datta-Mannan A, Shanks E, Yuen E, Jin Y, Rehmel J, and Hall SD
- Subjects
- Humans, Adult, Male, Female, Young Adult, Middle Aged, Adolescent, Dose-Response Relationship, Drug, Healthy Volunteers, Area Under Curve, Drug Administration Schedule, Anticonvulsants administration & dosage, Anticonvulsants pharmacokinetics, Anticonvulsants adverse effects, Administration, Oral, Carbamazepine administration & dosage, Carbamazepine adverse effects, Carbamazepine pharmacokinetics, Cytochrome P-450 CYP3A metabolism, Cytochrome P-450 CYP3A Inducers administration & dosage, Cytochrome P-450 CYP3A Inducers adverse effects, Cytochrome P-450 CYP3A Inducers pharmacology, Midazolam pharmacokinetics, Midazolam administration & dosage, Midazolam adverse effects, Drug Interactions
- Abstract
Carbamazepine (CBZ) is the recommended alternative to rifampicin as a CYP3A4 inducer in drug-drug interaction studies. However, the traditional CBZ dosing paradigm can lead to several adverse events (AEs). This study tested a shorter CBZ dosing regimen using the CYP3A4-sensitive index substrate midazolam (MDZ). This was a fixed-sequence arm of an open-label, phase I study (NCT04840888). Healthy participants (n = 15) aged 18-63 years received oral doses of 1.2 mg MDZ alone (Day 1), CBZ b.i.d. alone (100 mg Days 2-4; 200 mg Days 5-7; 300 mg Days 8-10 and 12-13), and 300 mg CBZ b.i.d. plus 1.2 mg MDZ (Days 11 and 14). One participant (6.7%) experienced constipation due to treatment with CBZ plus MDZ on Day 11. One participant (6.7%) experienced urticaria (Days 12-13), and two participants (13.3%) experienced somnolence (Days 8-10) due to treatment with 300 mg CBZ b.i.d. alone. All AEs were mild. For MDZ, the geometric mean (90% CI) ratio (vs. Day 1) of the area under the curve (AUC 0-∞) was 0.28 (0.24-0.31) on Day 11 and 0.26 (0.23-0.29) on Day 14. The AUC (0-12 hours) of CBZ was 114,000 ng∙h/mL on Day 11 and 105,000 ng∙h/mL on Day 14. Steady-state concentrations of CBZ and induction of CYP3A4 were achieved on Day 11. The data are consistent with predictions of physiologically-based pharmacokinetic models in Simcyp. The 9-day dosing regimen for CBZ induction was well-tolerated by healthy participants, supporting the use of a shorter CBZ regimen for CYP3A4 induction studies., (© 2024 The Author(s). Clinical Pharmacology & Therapeutics published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics.)
- Published
- 2024
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22. Post-Movement Beta Synchrony Inhibits Cortical Excitability.
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Rhodes E, Gaetz W, Marsden J, and Hall SD
- Abstract
Background/objectives: This study investigates the relationship between movement-related beta synchrony and primary motor cortex (M1) excitability, focusing on the time-dependent inhibition of movement. Voluntary movement induces beta frequency (13-30 Hz) event-related desynchronisation (B-ERD) in M1, followed by post-movement beta rebound (PMBR). Although PMBR is linked to cortical inhibition, its temporal relationship with motor cortical excitability is unclear. This study aims to determine whether PMBR acts as a marker for post-movement inhibition by assessing motor-evoked potentials (MEPs) during distinct phases of the beta synchrony profile., Methods: Twenty-five right-handed participants (mean age: 24 years) were recruited. EMG data were recorded from the first dorsal interosseous muscle, and TMS was applied to the M1 motor hotspot to evoke MEPs. A reaction time task was used to elicit beta oscillations, with TMS delivered at participant-specific time points based on EEG-derived beta power envelopes. MEP amplitudes were compared across four phases: B-ERD, early PMBR, peak PMBR, and late PMBR., Results: Our findings demonstrate that MEP amplitude significantly increased during B-ERD compared to rest, indicating heightened cortical excitability. In contrast, MEPs recorded during peak PMBR were significantly reduced, suggesting cortical inhibition. While all three PMBR phases exhibited reduced cortical excitability, a trend toward amplitude-dependent inhibition was observed., Conclusions: This study confirms that PMBR is linked to reduced cortical excitability, validating its role as a marker of motor cortical inhibition. These results enhance the understanding of beta oscillations in motor control and suggest that further research on altered PMBR could be crucial for understanding neurological and psychiatric disorders., Competing Interests: The authors have no conflicts of interest to declare.
- Published
- 2024
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23. Exploring the Feasibility of Bidirectional Control of Beta Oscillatory Power in Healthy Controls as a Potential Intervention for Parkinson's Disease Movement Impairment.
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Anil K, Ganis G, Freeman JA, Marsden J, and Hall SD
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- Humans, Female, Male, Middle Aged, Aged, Adult, Movement physiology, Beta Rhythm physiology, Young Adult, Pilot Projects, Reaction Time physiology, Motor Cortex physiopathology, Motor Cortex physiology, Double-Blind Method, Parkinson Disease physiopathology, Parkinson Disease therapy, Neurofeedback methods, Electroencephalography methods
- Abstract
Neurofeedback (NF) is a promising intervention for improvements in motor performance in Parkinson's disease. This NF pilot study in healthy participants aimed to achieve the following: (1) determine participants' ability to bi-directionally modulate sensorimotor beta power and (2) determine the effect of NF on movement performance. A real-time EEG-NF protocol was used to train participants to increase and decrease their individual motor cortex beta power amplitude, using a within-subject double-blind sham-controlled approach. Movement was assessed using a Go/No-go task. Participants completed the NASA Task Load Index and provided verbal feedback of the NF task difficulty. All 17 participants (median age = 38 (19-65); 10 females) reliably reduced sensorimotor beta power. No participant could reliably increase their beta activity. Participants reported that the NF task was challenging, particularly increasing beta. A modest but significant increase in reaction time correlated with a reduction in beta power only in the real condition. Findings suggest that beta power control difficulty varies by modulation direction, affecting participant perceptions. A correlation between beta power reduction and reaction times only in the real condition suggests that intentional beta power reduction may shorten reaction times. Future research should examine the minimum beta threshold for meaningful motor improvements, and the relationship between EEG mechanisms and NF learning to optimise NF outcomes.
- Published
- 2024
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24. Dissection of protein and RNA regions required for SPEN binding to XIST A-repeat RNA.
- Author
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Button AC, Hall SD, Ashley EL, and McHugh CA
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- Female, Humans, Chromatin, DNA-Binding Proteins genetics, Gene Silencing, RNA, Untranslated, X Chromosome metabolism, X Chromosome Inactivation genetics, RNA, Long Noncoding genetics, RNA, Long Noncoding metabolism, RNA-Binding Proteins genetics, RNA-Binding Proteins metabolism
- Abstract
XIST noncoding RNA promotes the initiation of X chromosome silencing by recruiting the protein SPEN to one X chromosome in female mammals. The SPEN protein is also called SHARP (SMRT and HDAC-associated repressor protein) and MINT (Msx-2 interacting nuclear target) in humans. SPEN recruits N-CoR2 and HDAC3 to initiate histone deacetylation on the X chromosome, leading to the formation of repressive chromatin marks and silencing gene expression. We dissected the contributions of different RNA and protein regions to the formation of a human XIST-SPEN complex in vitro and identified novel sequence and structure determinants that may contribute to X chromosome silencing initiation. Binding of SPEN to XIST RNA requires RRM 4 of the protein, in contrast to the requirement of RRM 3 and RRM 4 for specific binding to SRA RNA. Measurements of SPEN binding to full-length, dimeric, trimeric, or other truncated versions of the A-repeat region revealed that high-affinity binding of XIST to SPEN in vitro requires a minimum of four A-repeat segments. SPEN binding to XIST A-repeat RNA changes the accessibility of the RNA at specific nucleotide sequences, as indicated by changes in RNA reactivity through chemical structure probing. Based on computational modeling, we found that inter-repeat duplexes formed by multiple A-repeats can present an unpaired adenosine in the context of a double-stranded region of RNA. The presence of this specific combination of sequence and structural motifs correlates with high-affinity SPEN binding in vitro. These data provide new information on the molecular basis of the XIST and SPEN interaction., (© 2024 Button et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society.)
- Published
- 2024
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25. Colocalization of IgG and IgA Heavy Chains with Kappa and Lambda Light Chains in Glomerular Deposits of IgA Nephropathy Patients Using High-Resolution Confocal Microscopy and Correlation with Oxford MEST-C Scores.
- Author
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Rizk DV, Novak L, Hall SD, Moldoveanu Z, Julian BA, Novak J, and Haas M
- Abstract
Routine immunofluorescence microscopy of glomerular immunodeposits in IgA nephropathy shows IgA, C3, and lambda light chains, and sometimes IgG, IgM, and kappa light chains. However, a previous study using high-resolution confocal microscopy showed IgG in all IgA nephropathy cases, likely representing autoantibodies specific for galactose-deficient IgA1. Here, we used high-resolution confocal microscopy to examine the composition of glomerular immunodeposits and colocalization of kappa and lambda light chains with IgA or IgG heavy chains in kidney-biopsy samples from twenty patients with IgA nephropathy, seventeen without IgG, and nine with no or trace kappa light chains by routine immunofluorescence microscopy. IgG was detected in all biopsies by high-resolution confocal microscopy. Single-optical-plane images showed similar colocalization of IgG heavy chains with kappa and lambda light chains. Colocalization of IgA heavy chains was greater with lambda light chains than with kappa light chains. Colocalization of IgG heavy chain with kappa light chains was higher than with lambda light chains in biopsies with endocapillary hypercellularity and crescents, i.e., biopsies with active lesions. We confirmed the utility of high-resolution confocal microscopy to detect components of glomerular immunodeposits not apparent on routine immunofluorescence microscopy and for colocalization of different components, potentially clarifying the pathogenesis of IgA nephropathy.
- Published
- 2023
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26. Prediction of the Renal Organic Anion Transporter 1 (OAT1)- Mediated Drug Interactions for LY404039, the Active Metabolite of Pomaglumetad Methionil.
- Author
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Pak YA, Posada MM, Bacon J, Long A, Annes W, Witcher J, Mitchell M, Tirona RG, Hall SD, and Hillgren KM
- Subjects
- Models, Biological, Prodrugs metabolism, Prodrugs pharmacokinetics, Humans, Male, Female, Adult, Middle Aged, Amino Acids metabolism, Cyclic S-Oxides blood, Cyclic S-Oxides pharmacokinetics, Bridged Bicyclo Compounds, Heterocyclic blood, Bridged Bicyclo Compounds, Heterocyclic pharmacokinetics, Drug Interactions
- Abstract
Purpose: The objective of this work was to demonstrate that clinical OAT1-mediated DDIs can be predicted using physiologically based pharmacokinetic (PBPK) modeling., Methods: LY404039 is a metabotropic glutamate receptor 2/3 agonist and the active moiety of the prodrug pomaglumetad methionil (LY2140023). After oral administration, pomaglumetad methionil is rapidly taken up by enterocytes via PEPT1 and once absorbed, converted to LY404039 via membrane dehydropeptidase 1 (DPEP1). LY404039 is renally excreted by both glomerular filtration and active secretion and in vitro studies showed that the active secretion of LY404039 was mediated by the organic anion transporter 1 (OAT1). Both clinical and in vitro data were used to build a PBPK model to predict OAT1-mediated DDIs., Results: In vitro inhibitory potencies (IC
50 ) of the known OAT inhibitors, probenecid and ibuprofen, were determined to be 4.00 and 2.63 µM, respectively. Subsequently, clinical drug-drug interaction (DDI) study showed probenecid reduced the renal clearance of LY404039 by 30 to 40%. The PBPK bottom-up model, predicted a renal clearance that was approximately 20% lower than the observed one. The middle-out model, using an OAT1 relative activity factor (RAF) of 3, accurately reproduced the renal clearance of LY404039 and pharmacokinetic (PK) changes of LY404039 in the presence of probenecid., Conclusions: OAT1- mediated DDIs can be predicted using in vitro measured IC50 and PBPK modeling. The effect of ibuprofen was predicted to be minimal (AUC ratio of 1.15) and not clinically relevant., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2023
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27. Impact of Heterotropic Allosteric Modulation on the Time-Dependent Inhibition of Cytochrome P450 3A4.
- Author
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Rougée LRA, Bedwell DW, Hansen K, Abraham TL, and Hall SD
- Subjects
- Humans, Troleandomycin metabolism, Troleandomycin pharmacology, Clarithromycin, Microsomes, Liver metabolism, Drug Interactions, Carbamazepine pharmacology, Carbamazepine metabolism, Cytochrome P-450 CYP3A metabolism, Midazolam pharmacology, Midazolam metabolism
- Abstract
The current study was designed to investigate the influence of allosteric effectors on the metabolism of the prototypical cytochrome P450 (CYP) 3A4 substrate midazolam (MDZ), and on the determination in vitro time-dependent inhibition (TDI) of CYP3A4 using human liver microsomes (HLM). As the concentration of midazolam increased to 250 µ M in HLMs, homotropic cooperativity resulted in a decrease in the 1'-hydroxymidazolam to 4-hydroxymidazolam ratio to a maximum of 1.1. The presence of varying concentrations of testosterone, progesterone (PGS), or carbamazepine (CBZ) in HLMs with MDZ could recapitulate the effect of homotropic cooperativity such that the formation rates of the 1'hydroxymidazolam and 4-hydroxymidazolam were equal even at low concentrations of MDZ. The presence of PGS (10 or 100 µ M) and CBZ (100 or 1000 µ M) in in vitro TDI determination of four known CYP3A4 time-dependent inactivators (clarithromycin, troleandomycin, mibefradil, raloxifene) simultaneously decreased potency and inactivation rate constant, resulting in fold changes in inactivation efficiency on average of 1.6-fold and 13-fold for the low and high concentrations of allosteric modulator tested, respectively. The formation of a metabolic-intermediate complex (MIC) for clarithromycin and troleandomycin decreased in the presence of the allosteric modulators in a concentration-dependent manner, reaching a new steady state formation that could not be overcome with increased incubation time. Maximum reduction of the MIC formed by clarithromycin was up to ∼91%, while troleandomycin MIC decreased up to ∼31%. These findings suggest that the absence of endogenous allosteric modulators may contribute to the poor translation of HLM-based drug-drug interaction predictions. SIGNIFICANCE STATEMENT: The reported overprediction of in vitro human liver microsome time-dependent inhibition of CYP3A4 and observed drug interactions in vivo remains an issue in drug development. We provide characterization of allosteric modulators on the CYP3A4 metabolism of the prototypical substrate midazolam, demonstrating the ability of the modulators to recapitulate the homotropic cooperativity of midazolam. Furthermore, we demonstrate that allosteric heterotropic cooperativity of CYP3A4 can impact the time-dependent inhibition kinetics of known mechanisms-based inhibitors, providing a potential mechanism to explain the overprediction., (Copyright © 2023 by The American Society for Pharmacology and Experimental Therapeutics.)
- Published
- 2023
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28. A Systematic Review of Neurofeedback for the Management of Motor Symptoms in Parkinson's Disease.
- Author
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Anil K, Hall SD, Demain S, Freeman JA, Ganis G, and Marsden J
- Abstract
Background: Neurofeedback has been proposed as a treatment for Parkinson's disease (PD) motor symptoms by changing the neural network activity directly linked with movement. However, the effectiveness of neurofeedback as a treatment for PD motor symptoms is unclear., Aim: To systematically review the literature to identify the effects of neurofeedback in people with idiopathic PD; as defined by measurement of brain activity; motor function; and performance., Design: A systematic review. Included Sources and Articles: PubMed; MEDLINE; Cinhal; PsychoInfo; Prospero; Cochrane; ClinicalTrials.gov; EMBASE; Web of Science; PEDro; OpenGrey; Conference Paper Index; Google Scholar; and eThos; searched using the Population-Intervention-Comparison-Outcome (PICO) framework. Primary studies with the following designs were included: randomized controlled trials (RCTs), non-RCTs; quasi-experimental; pre/post studies; and case studies., Results: This review included 11 studies out of 6197 studies that were identified from the literature search. Neuroimaging methods used were fMRI; scalp EEG; surface brain EEG; and deep brain EEG; where 10-15 Hz and the supplementary motor area were the most commonly targeted signatures for EEG and fMRI, respectively. Success rates for changing one's brain activity ranged from 47% to 100%; however, both sample sizes and success criteria differed considerably between studies. While six studies included a clinical outcome; a lack of consistent assessments prevented a reliable conclusion on neurofeedback's effectiveness. Narratively, fMRI neurofeedback has the greatest potential to improve PD motor symptoms. Two main limitations were found in the studies that contributed to the lack of a confident conclusion: (1) insufficient clinical information and perspectives (e.g., no reporting of adverse events), and (2) limitations in numerical data reporting (e.g., lack of explicit statistics) that prevented a meta-analysis., Conclusions: While fMRI neurofeedback was narratively the most effective treatment; the omission of clinical outcome measures in studies using other neurofeedback approaches limits comparison. Therefore, no single neurofeedback type can currently be identified as an optimal treatment for PD motor symptoms. This systematic review highlights the need to improve the inclusion of clinical information and more robust reporting of numerical data in future work. Neurofeedback appears to hold great potential as a treatment for PD motor symptoms. However, this field is still in its infancy and needs high quality RCTs to establish its effectiveness. Review Registration: PROSPERO (ID: CRD42020191097).
- Published
- 2021
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29. Irreversible Enzyme Inhibition Kinetics and Drug-Drug Interactions.
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Mohutsky M and Hall SD
- Subjects
- Catalysis, Cytochrome P-450 Enzyme Inhibitors pharmacology, Drug Interactions, Humans, Inhibitory Concentration 50, Kinetics, Time Factors, Xenobiotics pharmacology, Cytochrome P-450 Enzyme System metabolism, Pharmaceutical Preparations chemistry
- Abstract
This chapter describes the types of irreversible inhibition of drug-metabolizing enzymes and the methods commonly employed to quantify the irreversible inhibition and subsequently predict the extent and time course of clinically important drug-drug interactions., (© 2021. Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2021
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30. Abemaciclib Does Not Have a Clinically Meaningful Effect on Pharmacokinetics of CYP1A2, CYP2C9, CYP2D6, and CYP3A4 Substrates in Patients with Cancer.
- Author
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Turner PK, Hall SD, Chapman SC, Rehmel JL, Royalty JE, Guo Y, and Kulanthaivel P
- Subjects
- Administration, Oral, Adult, Aged, Aminopyridines administration & dosage, Area Under Curve, Benzimidazoles administration & dosage, Caffeine pharmacokinetics, Cells, Cultured, Cytochrome P-450 CYP1A2 metabolism, Cytochrome P-450 CYP2C9 metabolism, Cytochrome P-450 CYP2D6 metabolism, Cytochrome P-450 CYP3A metabolism, Dextromethorphan pharmacokinetics, Drug Interactions, Female, Hepatocytes, Humans, Male, Midazolam pharmacokinetics, Middle Aged, Neoplasms metabolism, Primary Cell Culture, Protein Kinase Inhibitors administration & dosage, Warfarin pharmacokinetics, Aminopyridines pharmacokinetics, Benzimidazoles pharmacokinetics, Neoplasms drug therapy, Protein Kinase Inhibitors pharmacokinetics
- Abstract
Abemaciclib is an orally administered, potent inhibitor of cyclin-dependent kinases 4 and 6 and is metabolized extensively by CYP3A4. The effects of abemaciclib on several CYPs were qualified in vitro and subsequently evaluated in a clinical study. In vitro, human hepatocytes were treated with vehicle, abemaciclib, or abemaciclib metabolites [ N -desethylabemaciclib (M2) or hydroxyabemaciclib (M20)]. mRNA levels for eight CYPs were measured using reverse-transcription quantitative polymerase chain reaction, and, additionally, catalytic activities for three CYPs were determined. In the clinical study, adult patients with cancer received a drug cocktail containing CYP substrates [midazolam (3A), warfarin (2C9), dextromethorphan (2D6), and caffeine (1A2)] either alone or in combination with abemaciclib. Plasma pharmacokinetics (PK) samples were analyzed for all substrates, caffeine metabolite paraxanthine, and abemaciclib; polymorphisms of CYP2C9, CYP2D6, CYP3A4, and CYP3A5 were evaluated. In vitro, downregulation of CYP mRNA, including 1A2, 2B6, 2C8, 2C9, 2D6, and 3A, by abemaciclib and/or M2 and M20 was observed at clinically relevant concentrations. In humans, abemaciclib did not affect the PK of CYP2D6 or CYP2C9 substrates. Minor statistically significant but clinically irrelevant changes were observed for midazolam [area under the concentration versus time curve from zero to infinity (AUC
0-inf ) (13% lower), Cmax (15% lower)], caffeine [AUC0-inf (56% higher)], and paraxanthine: caffeine [area under the concentration versus time curve from 0 to 24 hours ratio (was approximately 30% lower)]. However, given the magnitude of the effect, these changes are not considered clinically relevant. In conclusion, the downregulation of CYP mRNA mediated by abemaciclib in vitro did not translate into clinically meaningful drug-drug interactions in patients with cancer. SIGNIFICANCE STATEMENT: Despite observations that abemaciclib alters the mRNA of various CYP isoforms in vitro, a clinical study using a drug cocktail approach found no clinically meaningful drug-drug interactions between abemaciclib and a range of CYP substrates [midazolam (CYP3A4), S -warfarin (CYP2C9), dextromethorphan (CYP2D6), and caffeine (CYP1A2)]. This lack of translation suggests greater understanding of mechanisms of CYP downregulation is needed to accurately predict clinical drug-drug interaction risk from in vitro data., (Copyright © 2020 by The Author(s).)- Published
- 2020
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31. Predicting Clinical Effects of CYP3A4 Modulators on Abemaciclib and Active Metabolites Exposure Using Physiologically Based Pharmacokinetic Modeling.
- Author
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Posada MM, Morse BL, Turner PK, Kulanthaivel P, Hall SD, and Dickinson GL
- Subjects
- Administration, Oral, Adult, Aged, Alkynes pharmacokinetics, Aminopyridines administration & dosage, Aminopyridines blood, Area Under Curve, Benzimidazoles administration & dosage, Benzimidazoles blood, Benzoxazines pharmacokinetics, Bosentan pharmacokinetics, Clarithromycin administration & dosage, Clarithromycin pharmacokinetics, Computer Simulation, Cyclin-Dependent Kinases administration & dosage, Cyclin-Dependent Kinases blood, Cyclopropanes pharmacokinetics, Cytochrome P-450 CYP3A Inducers administration & dosage, Cytochrome P-450 CYP3A Inhibitors administration & dosage, Diltiazem pharmacokinetics, Drug Interactions, Female, Healthy Volunteers, Humans, Itraconazole pharmacokinetics, Ketoconazole pharmacokinetics, Male, Middle Aged, Modafinil pharmacokinetics, Models, Biological, Rifampin administration & dosage, Rifampin pharmacokinetics, Verapamil pharmacokinetics, Aminopyridines metabolism, Aminopyridines pharmacokinetics, Benzimidazoles metabolism, Benzimidazoles pharmacokinetics, Cyclin-Dependent Kinases metabolism, Cyclin-Dependent Kinases pharmacokinetics, Cytochrome P-450 CYP3A Inducers pharmacokinetics, Cytochrome P-450 CYP3A Inhibitors pharmacokinetics
- Abstract
Abemaciclib, a selective inhibitor of cyclin-dependent kinases 4 and 6, is metabolized mainly by cytochrome P450 (CYP)3A4. Clinical studies were performed to assess the impact of strong inhibitor (clarithromycin) and inducer (rifampin) on the exposure of abemaciclib and active metabolites. A physiologically based pharmacokinetic (PBPK) model incorporating the metabolites was developed to predict the effect of other strong and moderate CYP3A4 inhibitors and inducers. Clarithromycin increased the area under the plasma concentration-time curve (AUC) of abemaciclib and potency-adjusted unbound active species 3.4-fold and 2.5-fold, respectively. Rifampin decreased corresponding exposures 95% and 77%, respectively. These changes influenced the fraction metabolized via CYP3A4 in the model. An absolute bioavailability study informed the hepatic and gastric availability. In vitro data and a human radiolabel study determined the fraction and rate of formation of the active metabolites as well as absorption-related parameters. The predicted AUC ratios of potency-adjusted unbound active species with rifampin and clarithromycin were within 0.7- and 1.25-fold of those observed. The PBPK model predicted 3.78- and 7.15-fold increases in the AUC of the potency-adjusted unbound active species with strong CYP3A4 inhibitors itraconazole and ketoconazole, respectively; and 1.62- and 2.37-fold increases with the concomitant use of moderate CYP3A4 inhibitors verapamil and diltiazem, respectively. The model predicted modafinil, bosentan, and efavirenz would decrease the AUC of the potency-adjusted unbound active species by 29%, 42%, and 52%, respectively. The current PBPK model, which considers changes in unbound potency-adjusted active species, can be used to inform dosing recommendations when abemaciclib is coadministered with CYP3A4 perpetrators., (© 2020 Eli Lilly and Company. The Journal of Clinical Pharmacology published by Wiley Periodicals, Inc. on behalf of American College of Clinical Pharmacolog.)
- Published
- 2020
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32. High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
- Author
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Matyjasik MM, Hall SD, and Batey RT
- Subjects
- Bacillus subtilis genetics, Ligands, Bacillus subtilis chemistry, RNA Folding, Riboswitch
- Abstract
Riboswitches are important model systems for the development of approaches to search for RNA-targeting therapeutics. A principal challenge in finding compounds that target riboswitches is that the effector ligand is typically almost completely encapsulated by the RNA, which severely limits the chemical space that can be explored. Efforts to find compounds that bind the guanine/adenine class of riboswitches with a high affinity have in part focused on purines modified at the C6 and C2 positions. These studies have revealed compounds that have low to sub-micromolar affinity and, in a few cases, have antimicrobial activity. To further understand how these compounds interact with the guanine riboswitch, we have performed an integrated structural and functional analysis of representative guanine derivatives with modifications at the C8, C6 and C2 positions. Our data indicate that while modifications of guanine at the C6 position are generally unfavorable, modifications at the C8 and C2 positions yield compounds that rival guanine with respect to binding affinity. Surprisingly, C2-modified guanines such as N 2-acetylguanine completely disrupt a key Watson-Crick pairing interaction between the ligand and RNA. These compounds, which also modulate transcriptional termination as efficiently as guanine, open up a significant new chemical space of guanine modifications in the search for antimicrobial agents that target purine riboswitches.
- Published
- 2020
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33. Quantitative Prediction of CYP3A4- and CYP3A5-Mediated Drug Interactions.
- Author
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Guo Y, Lucksiri A, Dickinson GL, Vuppalanchi RK, Hilligoss JK, and Hall SD
- Subjects
- Area Under Curve, Chromatography, Liquid, Cross-Over Studies, Dose-Response Relationship, Drug, Drug Interactions, Genotype, Humans, Intestine, Small metabolism, Ketoconazole pharmacology, Liver metabolism, Mass Spectrometry, Cytochrome P-450 CYP3A genetics, Ketoconazole administration & dosage, Midazolam pharmacokinetics, Models, Biological
- Abstract
We verified a physiologically-based pharmacokinetic (PBPK) model to predict cytochrome P450 3A4/5-mediated drug-drug interactions (DDIs). A midazolam (MDZ)-ketoconazole (KTZ) interaction study in 24 subjects selected by CYP3A5 genotype, and liquid chromatography and mass spectroscopy quantification of CYP3A4/5 abundance from independently acquired and genotyped human liver (n = 136) and small intestinal (N = 12) samples, were conducted. The observed CYP3A5 genetic effect on MDZ systemic and oral clearance was successfully replicated by a mechanistic framework incorporating the proteomics-informed CYP3A abundance and optimized small intestinal CYP3A4 abundance based on MDZ intestinal availability (F
G ) of 0.44. Furthermore, combined with a modified KTZ PBPK model, this framework recapitulated the observed geometric mean ratio of MDZ area under the curve (AUCR) following 200 or 400 mg KTZ, which was, respectively, 2.7-3.4 and 3.9-4.7-fold in intravenous administration and 11.4-13.4 and 17.0-19.7-fold in oral administration, with AUCR numerically lower (P > 0.05) in CYP3A5 expressers than nonexpressers. In conclusion, the developed mechanistic framework supports dynamic prediction of CYP3A-mediated DDIs in study planning by bridging DDIs between CYP3A5 expressers and nonexpressers., (© 2019 Eli Lilly and Company. Clinical Pharmacology & Therapeutics © 2019 American Society for Clinical Pharmacology and Therapeutics.)- Published
- 2020
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34. Bradykinesia Is Driven by Cumulative Beta Power During Continuous Movement and Alleviated by Gabaergic Modulation in Parkinson's Disease.
- Author
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Prokic EJ, Stanford IM, Woodhall GL, Williams AC, and Hall SD
- Abstract
Spontaneous and "event-related" motor cortex oscillations in the beta (15-30 Hz) frequency range are well-established phenomena. However, the precise functional significance of these features is uncertain. An understanding of the specific function is of importance for the treatment of Parkinson's disease (PD), where attenuation of augmented beta throughout the motor network coincides with functional improvement. Previous research using a discrete movement task identified normalization of elevated spontaneous beta and postmovement beta rebound following GABAergic modulation. Here, we explore the effects of the gamma-aminobutyric acid type A modulator, zolpidem, on beta power during the performance of serial movement in 17 (15M, 2F; mean age, 66 ± 6.3 years) PD patients, using a repeated-measures, double-blinded, randomized, placebo-control design. Motor symptoms were monitored before and after treatment, using time-based Unified Parkinson's Disease Rating Scale measurements and beta oscillations in primary motor cortex (M1) were measured during a serial-movement task, using magnetoencephalography. We demonstrate that a cumulative increase in M1 beta power during a 10-s tapping trial is reduced following zolpidem, but not placebo, which is accompanied by an improvement in movement speed and efficacy. This work provides a clear mechanism for the generation of abnormally elevated beta power in PD and demonstrates that perimovement beta accumulation drives the slowing, and impaired initiation, of movement. These findings further indicate a role for GABAergic modulation in bradykinesia in PD, which merits further exploration as a therapeutic target., (Copyright © 2019 Prokic, Stanford, Woodhall, Williams and Hall.)
- Published
- 2019
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35. The Effect of Promiscuous Aggregation on in Vitro Drug Metabolism Assays.
- Author
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Tres F, Posada MM, Hall SD, Mohutsky MA, and Taylor LS
- Subjects
- Carvedilol chemistry, Carvedilol metabolism, Colloids metabolism, Cytochrome P-450 Enzyme System metabolism, Diclofenac chemistry, Diclofenac metabolism, Dihydropyridines metabolism, Drug Interactions, High-Throughput Screening Assays methods, Humans, Inhibitory Concentration 50, Kinetics, Metabolic Clearance Rate drug effects, Phenacetin chemistry, Phenacetin metabolism, Recombinant Proteins metabolism, Solvents chemistry, Tamoxifen chemistry, Tamoxifen metabolism, Cytochrome P-450 Enzyme System chemistry, Dihydropyridines chemistry, Microsomes, Liver metabolism, Recombinant Proteins chemistry
- Abstract
Purpose: Many bioactive molecules show a type of solution phase behavior, termed promiscuous aggregation, whereby at micromolar concentrations, colloidal drug-rich aggregates are formed in aqueous solution. These aggregates are known to be a major cause of false positives and false negatives in select enzymatic high-throughput screening assays. The goal of this study was to investigate the impact of drug-rich aggregates on in vitro drug screening metabolism assays., Methods: Cilnidipine was selected as an aggregate former and its impact on drug metabolism was evaluated against rCYP2D6, rCYP1A2, rCYP2C9 and human liver microsomes., Results: The cilnidipine aggregates were shown to non-specifically inhibit multiple cytochrome P450 enzymes with an IC
50 comparable with the IC50 of potent model inhibitors., Conclusions: This newly demonstrated mode of "promiscuous inhibition" is of great importance as it can lead to false positives during drug metabolism evaluations and thus it needs to be considered in the future to better predict in vivo drug-drug interactions.- Published
- 2019
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36. Physiologically-Based Pharmacokinetic Modeling of Atorvastatin Incorporating Delayed Gastric Emptying and Acid-to-Lactone Conversion.
- Author
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Morse BL, Alberts JJ, Posada MM, Rehmel J, Kolur A, Tham LS, Loghin C, Hillgren KM, Hall SD, and Dickinson GL
- Subjects
- Atorvastatin administration & dosage, Cells, Cultured, Cytochrome P-450 CYP3A, Dose-Response Relationship, Drug, Drug Interactions, Gastric Acid metabolism, Glucagon-Like Peptides administration & dosage, Glucagon-Like Peptides pharmacokinetics, Hepatocytes cytology, Hepatocytes drug effects, Hepatocytes metabolism, Humans, Immunoglobulin Fc Fragments administration & dosage, Models, Biological, Organic Anion Transporters, Recombinant Fusion Proteins administration & dosage, Atorvastatin pharmacokinetics, Gastroparesis complications, Glucagon-Like Peptides analogs & derivatives, Lactones chemistry, Recombinant Fusion Proteins pharmacokinetics
- Abstract
The drug-drug interaction profile of atorvastatin confirms that disposition is determined by cytochrome P450 (CYP) 3A4 and organic anion transporting polypeptides (OATPs). Drugs that affect gastric emptying, including dulaglutide, also affect atorvastatin pharmacokinetics (PK). Atorvastatin is a carboxylic acid that exists in equilibrium with a lactone form in vivo. The purpose of this work was to assess gastric acid-mediated lactone equilibration of atorvastatin and incorporate this into a physiologically-based PK (PBPK) model to describe atorvastatin acid, lactone, and their major metabolites. In vitro acid-to-lactone conversion was assessed in simulated gastric fluid and included in the model. The PBPK model was verified with in vivo data including CYP3A4 and OATP inhibition studies. Altering the gastric acid-lactone equilibrium reproduced the change in atorvastatin PK observed with dulaglutide. The model emphasizes the need to include gastric acid-lactone conversion and all major atorvastatin-related species for the prediction of atorvastatin PK., (© 2019 Eli Lilly and Company CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals, Inc. on behalf of the American Society for Clinical Pharmacology and Therapeutics.)
- Published
- 2019
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37. Recommendations for the Design of Clinical Drug-Drug Interaction Studies With Itraconazole Using a Mechanistic Physiologically-Based Pharmacokinetic Model.
- Author
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Chen Y, Cabalu TD, Callegari E, Einolf H, Liu L, Parrott N, Peters SA, Schuck E, Sharma P, Tracey H, Upreti VV, Zheng M, Zhu AZX, and Hall SD
- Subjects
- Area Under Curve, Drug Dosage Calculations, Drug Interactions, Food-Drug Interactions, Humans, Itraconazole pharmacology, Models, Statistical, Cytochrome P-450 CYP3A metabolism, Itraconazole pharmacokinetics
- Abstract
Regulatory agencies currently recommend itraconazole (ITZ) as a strong cytochrome P450 3A (CYP3A) inhibitor for clinical drug-drug interaction (DDI) studies. This work by an International Consortium for Innovation and Quality in Pharmaceutical Development working group (WG) is to develop and verify a mechanistic ITZ physiologically-based pharmacokinetic model and provide recommendations for optimal DDI study design based on model simulations. To support model development and verification, in vitro and clinical PK data for ITZ and its metabolites were collected from WG member companies. The model predictions of ITZ DDIs with seven different CYP3A substrates were within the guest criteria for 92% of area under the concentration-time curve ratios and 95% of maximum plasma concentration ratios, thus verifying the model for DDI predictions. The verified model was used to simulate various clinical DDI study scenarios considering formulation, duration of dosing, dose regimen, and food status to recommend the optimal design for maximal inhibitory effect by ITZ., (© 2019 The Authors CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals, Inc. on behalf of the American Society for Clinical Pharmacology and Therapeutics.)
- Published
- 2019
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38. Abemaciclib Inhibits Renal Tubular Secretion Without Changing Glomerular Filtration Rate.
- Author
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Chappell JC, Turner PK, Pak YA, Bacon J, Chiang AY, Royalty J, Hall SD, Kulanthaivel P, and Bonventre JV
- Subjects
- Antineoplastic Agents, Immunological pharmacology, Biological Transport drug effects, Breast Neoplasms drug therapy, Humans, Hypoglycemic Agents pharmacology, Metabolic Clearance Rate drug effects, Organic Cation Transport Proteins metabolism, Organic Cation Transporter 2 metabolism, Aminopyridines pharmacology, Benzimidazoles pharmacology, Cyclin-Dependent Kinase 4 antagonists & inhibitors, Cyclin-Dependent Kinase 6 antagonists & inhibitors, Glomerular Filtration Rate drug effects, Kidney Tubules drug effects, Kidney Tubules metabolism, Metformin pharmacology
- Abstract
Abemaciclib, an inhibitor of cyclin dependent kinases 4 and 6, is indicated for metastatic breast cancer treatment. Reversible increases in serum creatinine levels of ~15-40% over baseline have been observed following abemaciclib dosing. This study assessed the in vitro and clinical inhibition of renal transporters by abemaciclib and its metabolites using metformin (a clinically relevant transporter substrate), in a clinical study that quantified glomerular filtration and iohexol clearance. In vitro, abemaciclib inhibited metformin uptake by organic cation transporter 2, multidrug and toxin extrusion (MATE)1, and MATE2-K transporters with a half-maximal inhibitory concentration of 0.4-3.8 μM. Clinically, abemaciclib significantly increased metformin exposure but did not significantly affect measured glomerular filtration rate, serum neutrophil gelatinase-associated lipocalin (NGAL), serum cystatin-C, or the urinary markers of kidney tubular injury, NGAL and kidney injury molecule-1., (© 2018 Eli Lilly and Company. Clinical Pharmacology & Therapeutics published by Wiley Periodicals, Inc. on behalf of the American Society for Clinical Pharmacology and Therapeutics.)
- Published
- 2019
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39. Hepatic Organic Anion Transporting Polypeptide-Mediated Clearance in the Beagle Dog: Assessing In Vitro-In Vivo Relationships and Applying Cross-Species Empirical Scaling Factors to Improve Prediction of Human Clearance.
- Author
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Matsunaga N, Ufuk A, Morse BL, Bedwell DW, Bao J, Mohutsky MA, Hillgren KM, Hall SD, Houston JB, and Galetin A
- Subjects
- Animals, Dogs, Hepatocytes metabolism, Humans, Infusions, Intravenous, Liver cytology, Liver metabolism, Male, Models, Animal, Models, Biological, Pharmaceutical Preparations administration & dosage, Drug Evaluation, Preclinical methods, Metabolic Clearance Rate, Organic Anion Transporters metabolism, Pharmaceutical Preparations metabolism, Species Specificity
- Abstract
In the present study, the beagle dog was evaluated as a preclinical model to investigate organic anion transporting polypeptide (OATP)-mediated hepatic clearance. In vitro studies were performed with nine OATP substrates in three lots of plated male dog hepatocytes ± OATP inhibitor cocktail to determine total uptake clearance (CL
uptake ) and total and unbound cell-to-medium concentration ratio (Kpuu ). In vivo intrinsic hepatic clearances (CLint,H ) were determined following intravenous drug administration (0.1 mg/kg) in male beagle dogs. The in vitro parameters were compared with those previously reported in plated human, monkey, and rat hepatocytes; the ability of cross-species scaling factors to improve prediction of human in vivo clearance was assessed. CLuptake in dog hepatocytes ranged from 9.4 to 135 µ l/min/106 cells for fexofenadine and telmisartan, respectively. Active process contributed >75% to CLuptake for 5/9 drugs. Rosuvastatin and valsartan showed Kpuu > 10, whereas cerivastatin, pitavastatin, repaglinide, and telmisartan had Kpuu < 5. The extent of hepatocellular binding in dog was consistent with other preclinical species and humans. The bias (2.73-fold) obtained from comparison of predicted versus in vivo dog CLint,H was applied as an average empirical scaling factor (ESFav ) for in vitro-in vivo extrapolation of human CLint,H The ESFav based on dog reduced underprediction of human CLint,H for the same data set (geometric mean fold error = 2.1), highlighting its utility as a preclinical model to investigate OATP-mediated uptake. The ESFav from all preclinical species resulted in comparable improvement of human clearance prediction, in contrast to drug-specific empirical scalars, rationalized by species differences in expression and/or relative contribution of particular transporters to drug hepatic uptake., (Copyright © 2019 by The American Society for Pharmacology and Experimental Therapeutics.)- Published
- 2019
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40. Drug Interaction Involving Direct or Indirect Cytokine Modulation Should Be Investigated in Select Circumstances.
- Author
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Coutant DE and Hall SD
- Subjects
- Cytokines genetics, Cytokines metabolism, Gene Expression Regulation drug effects, Humans, Anti-Inflammatory Agents pharmacokinetics, Anti-Inflammatory Agents therapeutic use, Drug Interactions, Inflammation drug therapy, Proteins metabolism
- Published
- 2018
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41. Disease-Drug Interactions in Inflammatory States via Effects on CYP-Mediated Drug Clearance.
- Author
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Coutant DE and Hall SD
- Subjects
- Cytokines, Drug Interactions, Humans, Metabolic Clearance Rate drug effects, Protein Binding, Cytochrome P-450 Enzyme System metabolism, Inflammation drug therapy, Inflammation metabolism
- Abstract
The human inflammatory response can result in the alteration of drug clearance through effects on drug-metabolizing enzymes or drug transporters. In this article, clinical examples are reviewed of how diseases with moderate to severe inflammation can decrease cytochrome P450 (CYP)-mediated drug clearance and alter plasma protein binding. Also examined is how albumin, α-1-acid glycoprotein, drug fraction unbound in plasma, CYP content, and oral clearance can change dynamically with time in response to inflammation., (© 2018, The American College of Clinical Pharmacology.)
- Published
- 2018
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42. Transient Alpha and Beta Synchrony Underlies Preparatory Recruitment of Directional Motor Networks.
- Author
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Rhodes E, Gaetz WC, Marsden J, and Hall SD
- Subjects
- Adolescent, Adult, Aged, Female, Humans, Male, Middle Aged, Psychomotor Performance, Young Adult, Alpha Rhythm, Beta Rhythm, Cortical Synchronization, Motor Cortex physiology
- Abstract
Modulations in motor cortical beta and alpha activity have been implicated in the preparation, execution, and termination of voluntary movements. The functional role of motor cortex beta activity is yet to be defined, though two opposing theories prevail. The idling cortex theory suggests that large-scale motor networks, in the absence of input, revert to an intrinsic oscillatory state. The alternative theory proposes that beta activity promotes postural tone at the expense of voluntary movement. These theories are primarily based on observations of event-related desynchronization associated with movement onset. Here, we explore the changes in alpha and beta oscillatory activity associated with the specific behavioral patterns during an established directional uncertainty paradigm. We demonstrate that, consistent with current proposals, alpha and beta desynchronization reflects a process of disengagement from existing networks to enable the creation of functional assemblies. We demonstrate that, following desynchronization, a novel signature of transient alpha synchrony underlies the recruitment of functional assemblies required for directional control. Although alpha and beta desynchronization are dependent upon the number of cues presented, they are not predictive of movement preparation. However, the transient alpha synchrony occurs only when participants have sufficient information to prepare for movement and shows a direct relationship with behavioral performance measures.
- Published
- 2018
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43. Mechanistic understanding of the phase behavior of supersaturated solutions of poorly water-soluble drugs.
- Author
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Tres F, Posada MM, Hall SD, Mohutsky MA, and Taylor LS
- Subjects
- 2-Naphthylamine analogs & derivatives, 2-Naphthylamine chemistry, Fluorescent Dyes chemistry, HIV Protease Inhibitors chemistry, Lopinavir chemistry, Nanoparticles chemistry, Pyrrolidines chemistry, Ritonavir chemistry, Solubility, Spectrometry, Fluorescence, Vinyl Compounds chemistry, Water chemistry, Pharmaceutical Solutions chemistry
- Abstract
Amorphous solid dispersions (ASDs) are a promising formulation strategy to increase both the apparent aqueous solubility and bioavailability of poorly water-soluble drugs. Upon dissolution under nonsink conditions, ASDs can generate highly supersaturated drug solutions which can undergo liquid-liquid phase separation (LLPS) and/or crystallization. In this study, the phase behavior of supersaturated solutions generated by antisolvent addition and upon the dissolution of ASDs was evaluated using fluorescence lifetime measurements and several other orthogonal techniques, including steady-state fluorescence spectroscopy, ultraviolet (UV) extinction and concentration profiles, ultracentrifuge measurements and nanoparticle tracking analysis. Ritonavir and lopinavir were chosen as poorly water-soluble model drugs, and the polymer, Kollidon VA64, was selected to form the dispersions. The fluorescence lifetime of the environment-sensitive fluoroprobe, PRODAN, was monitored to determine the occurrence of LLPS and crystallization. It was found that only the 10% w/w drug loading ASDs dissolved to a concentration in solution higher than the LLPS concentration and this led to an increase in the lifetime of PRODAN due to partitioning of the fluoroprobe into the drug-rich phase. In contrast, the 50% w/w drug loading ASDs did not reach the amorphous solubility, pointing to a dissolution behavior controlled by the low water solubility and high hydrophobicity of the drug. Fluorescence lifetime measurements were demonstrated to be extremely useful for the characterization of the phase behavior of supersaturated solutions of poorly water-soluble drugs., (Copyright © 2018 Elsevier B.V. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
44. Proof of Concept Coded Aperture Miniature Mass Spectrometer Using a Cycloidal Sector Mass Analyzer, a Carbon Nanotube (CNT) Field Emission Electron Ionization Source, and an Array Detector.
- Author
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Amsden JJ, Herr PJ, Landry DMW, Kim W, Vyas R, Parker CB, Kirley MP, Keil AD, Gilchrist KH, Radauscher EJ, Hall SD, Carlson JB, Baldasaro N, Stokes D, Di Dona ST, Russell ZE, Grego S, Edwards SJ, Sperline RP, Denton MB, Stoner BR, Gehm ME, and Glass JT
- Abstract
Despite many potential applications, miniature mass spectrometers have had limited adoption in the field due to the tradeoff between throughput and resolution that limits their performance relative to laboratory instruments. Recently, a solution to this tradeoff has been demonstrated by using spatially coded apertures in magnetic sector mass spectrometers, enabling throughput and signal-to-background improvements of greater than an order of magnitude with no loss of resolution. This paper describes a proof of concept demonstration of a cycloidal coded aperture miniature mass spectrometer (C-CAMMS) demonstrating use of spatially coded apertures in a cycloidal sector mass analyzer for the first time. C-CAMMS also incorporates a miniature carbon nanotube (CNT) field emission electron ionization source and a capacitive transimpedance amplifier (CTIA) ion array detector. Results confirm the cycloidal mass analyzer's compatibility with aperture coding. A >10× increase in throughput was achieved without loss of resolution compared with a single slit instrument. Several areas where additional improvement can be realized are identified. Graphical Abstract ᅟ.
- Published
- 2018
- Full Text
- View/download PDF
45. Monitoring the Phase Behavior of Supersaturated Solutions of Poorly Water-Soluble Drugs Using Fluorescence Techniques.
- Author
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Tres F, Hall SD, Mohutsky MA, and Taylor LS
- Subjects
- Chemistry, Pharmaceutical methods, Crystallization methods, Fluorescence, Lipids chemistry, Solubility drug effects, Felodipine chemistry, Solutions chemistry, Water chemistry
- Abstract
Phase transformations of poorly water-soluble drugs, in low concentration, supersaturated aqueous solutions are of considerable interest. Herein, fluorescence lifetime and steady-state fluorescence spectroscopy were employed to investigate the fluorescence properties of the autofluorescent compound, felodipine (a 1,4-dihydropyridine calcium channel blocker), when present as free drug in solution, drug-rich aggregates, and crystals. Measurements were also performed in the absence and presence of liver microsomes. To study nonfluorescent drugs, an environment-sensitive fluoroprobe, 6-propionyl-2-dimethylaminonaphthalene, was employed. The lifetime of free felodipine in solution in simple media was found to be ∼0.4 ns, whereas felodipine present in drug-rich aggregates and crystals was characterized by a longer lifetime of ∼2 and ∼9 ns, respectively. In the presence of structures containing lipids, the local environment of felodipine was found to change based on fluorescence characteristics and the concentration where felodipine aggregates formed was greatly increased. The lifetime of 6-propionyl-2-dimethylaminonaphthalene in solutions containing clotrimazole (an imidazole derivative with antimycotic activity) or efavirenz (a non-nucleoside reverse transcriptase inhibitor with antiviral activity) increased on aggregate formation as a result of the change in polarity of the probe local environment. Fluorescence lifetime coupled with steady-state fluorescence spectroscopy was demonstrated to be effective in identifying the concentration where drug aggregates formed, contributing to improved understanding of the phase behavior of poorly water-soluble drugs in biologically relevant media., (Copyright © 2018 American Pharmacists Association®. Published by Elsevier Inc. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
46. Prediction of Transporter-Mediated Drug-Drug Interactions for Baricitinib.
- Author
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Posada MM, Cannady EA, Payne CD, Zhang X, Bacon JA, Pak YA, Higgins JW, Shahri N, Hall SD, and Hillgren KM
- Subjects
- Adult, Area Under Curve, Azetidines blood, Azetidines pharmacokinetics, Drug Interactions, HEK293 Cells, Humans, Male, Middle Aged, Purines, Pyrazoles, Sulfonamides blood, Sulfonamides pharmacokinetics, Time Factors, Young Adult, Azetidines pharmacology, Membrane Transport Proteins metabolism, Sulfonamides pharmacology
- Abstract
Baricitinib, an oral selective Janus kinase 1 and 2 inhibitor, undergoes active renal tubular secretion. Baricitinib was not predicted to inhibit hepatic and renal uptake and efflux drug transporters, based on the ratio of the unbound maximum eliminating-organ inlet concentration and the in vitro half-maximal inhibitory concentrations (IC
50 ). In vitro, baricitinib was a substrate for organic anion transporter (OAT)3, multidrug and toxin extrusion protein (MATE)2-K, P-glycoprotein (P-gp), and breast cancer resistance protein (BCRP). Probenecid, a strong OAT3 inhibitor, increased the area under the concentration-time curve from time zero to infinity (AUC[0-∞] ) of baricitinib by twofold and decreased renal clearance to 69% of control in healthy subjects. Physiologically based pharmacokinetic (PBPK) modeling reproduced the renal clearance of baricitinib and the inhibitory effect of probenecid using the in vitro IC50 value of 4.4 μM. Using ibuprofen and diclofenac in vitro IC50 values of 4.4 and 3.8 μM toward OAT3, 1.2 and 1.0 AUC(0-∞) ratios of baricitinib were predicted. These predictions suggest clinically relevant drug-drug interactions (DDIs) with ibuprofen and diclofenac are unlikely., (© 2017 The Authors. Clinical and Translational Science published by Wiley Periodicals, Inc. on behalf of American Society for Clinical Pharmacology and Therapeutics.)- Published
- 2017
- Full Text
- View/download PDF
47. The Impact of the Hepatocyte-to-Plasma pH Gradient on the Prediction of Hepatic Clearance and Drug-Drug Interactions for CYP2C9 and CYP3A4 Substrates.
- Author
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Rougée LRA, Mohutsky MA, Bedwell DW, Ruterbories KJ, and Hall SD
- Subjects
- Computer Simulation, Cytochrome P-450 CYP3A Inhibitors metabolism, Cytochrome P-450 CYP3A Inhibitors pharmacokinetics, Dextromethorphan metabolism, Dextromethorphan pharmacokinetics, Diclofenac analogs & derivatives, Diclofenac metabolism, Diclofenac pharmacokinetics, Drug Interactions, Female, Hepatocytes enzymology, Humans, Hydrogen-Ion Concentration, Kinetics, Male, Midazolam metabolism, Midazolam pharmacokinetics, Plasma enzymology, Testosterone metabolism, Testosterone pharmacokinetics, Warfarin analogs & derivatives, Warfarin metabolism, Warfarin pharmacokinetics, Warfarin pharmacology, Cytochrome P-450 CYP2C9 metabolism, Cytochrome P-450 CYP3A metabolism, Hepatocytes metabolism, Plasma metabolism
- Abstract
Surrogate assays for drug metabolism and inhibition are traditionally performed in buffer systems at pH 7.4, despite evidence that hepatocyte intracellular pH is 7.0. This pH gradient can result in a pK
a -dependent change in intracellular/extracellular concentrations for ionizable drugs that could affect predictions of clearance and P450 inhibition. The effect of microsomal incubation pH on in vitro enzyme kinetic parameters for CYP2C9 (diclofenac, (S)-warfarin) and CYP3A4 (midazolam, dextromethorphan, testosterone) substrates, enzyme specific reversible inhibitors (amiodarone, desethylamiodarone, clozapine, nicardipine, fluconazole, fluvoxamine, itraconazole) and a mechanism-based inhibitor (amiodarone) was investigated. Intrinsic clearance through CYP2C9 significantly increased (25% and 50% for diclofenac and (S)-warfarin respectively) at intracellular pH 7.0 compared with traditional pH 7.4. The CYP3A4 substrate dextromethorphan intrinsic clearance was decreased by 320% at pH 7.0, while midazolam and testosterone remained unchanged. Reversible inhibition of CYP2C9 was less potent at pH 7.0 compared with 7.4, while CYP3A4 inhibition potency was variably affected. Maximum enzyme inactivation rate of amiodarone toward CYP2C9 and CYP3A4 decreased at pH 7.0, while the irreversible inhibition constant remained unchanged for CYP2C9, but decreased for CYP3A4 at pH 7.0. Predictions of clearance and drug-drug interactions made through physiologically based pharmacokinetic models were improved with the inclusion of predicted intracellular concentrations based at pH 7.0 and in vitro parameters determined at pH 7.0. No general conclusion on the impact of pH could be made and therefore a recommendation to change buffer pH to 7.0 cannot be made at this time. It is recommended that the appropriate hepatocyte intracellular pH 7.0 be used for in vitro determinations when in vivo predictions are made., (Copyright © 2017 by The American Society for Pharmacology and Experimental Therapeutics.)- Published
- 2017
- Full Text
- View/download PDF
48. A Diagnostic Marker to Discriminate Childhood Apraxia of Speech From Speech Delay: IV. The Pause Marker Index.
- Author
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Shriberg LD, Strand EA, Fourakis M, Jakielski KJ, Hall SD, Karlsson HB, Mabie HL, McSweeny JL, Tilkens CM, and Wilson DL
- Subjects
- Adolescent, Adult, Age of Onset, Aged, Aged, 80 and over, Apraxias etiology, Child, Child, Preschool, Diagnosis, Differential, Female, Humans, Language Development Disorders classification, Longitudinal Studies, Male, Middle Aged, Retrospective Studies, Speech, Speech Production Measurement, Young Adult, Apraxias classification, Apraxias diagnosis, Language Development Disorders diagnosis, Severity of Illness Index
- Abstract
Purpose: Three previous articles provided rationale, methods, and several forms of validity support for a diagnostic marker of childhood apraxia of speech (CAS), termed the pause marker (PM). Goals of the present article were to assess the validity and stability of the PM Index (PMI) to scale CAS severity., Method: PM scores and speech, prosody, and voice precision-stability data were obtained for participants with CAS in idiopathic, neurogenetic, and complex neurodevelopmental disorders; adult-onset apraxia of speech consequent to stroke and primary progressive apraxia; and idiopathic speech delay. Three studies were completed including criterion and concurrent validity studies of the PMI and a temporal stability study of the PMI using retrospective case studies., Results: PM scores were significantly correlated with other signs of CAS precision and stability. The best fit of the distribution of PM scores to index CAS severity was obtained by dividing scores into 4 ordinal severity classifications: mild, mild-moderate, moderate-severe, and severe. Severity findings for the 4 classifications and retrospective longitudinal findings from 8 participants with CAS supported the validity and stability of the PMI., Conclusion: Findings support research and clinical use of the PMI to scale the severity of CAS.
- Published
- 2017
- Full Text
- View/download PDF
49. A Diagnostic Marker to Discriminate Childhood Apraxia of Speech From Speech Delay: III. Theoretical Coherence of the Pause Marker with Speech Processing Deficits in Childhood Apraxia of Speech.
- Author
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Shriberg LD, Strand EA, Fourakis M, Jakielski KJ, Hall SD, Karlsson HB, Mabie HL, McSweeny JL, Tilkens CM, and Wilson DL
- Subjects
- Adolescent, Aged, Aged, 80 and over, Apraxias etiology, Child, Child, Preschool, Diagnosis, Differential, Female, Humans, Language Tests, Male, Middle Aged, Speech Articulation Tests, Young Adult, Apraxias diagnosis, Language Development Disorders diagnosis, Models, Theoretical, Speech, Speech Perception
- Abstract
Purpose: Previous articles in this supplement described rationale for and development of the pause marker (PM), a diagnostic marker of childhood apraxia of speech (CAS), and studies supporting its validity and reliability. The present article assesses the theoretical coherence of the PM with speech processing deficits in CAS., Method: PM and other scores were obtained for 264 participants in 6 groups: CAS in idiopathic, neurogenetic, and complex neurodevelopmental disorders; adult-onset apraxia of speech (AAS) consequent to stroke and primary progressive apraxia of speech; and idiopathic speech delay., Results: Participants with CAS and AAS had significantly lower scores than typically speaking reference participants and speech delay controls on measures posited to assess representational and transcoding processes. Representational deficits differed between CAS and AAS groups, with support for both underspecified linguistic representations and memory/access deficits in CAS, but for only the latter in AAS. CAS-AAS similarities in the age-sex standardized percentages of occurrence of the most frequent type of inappropriate pauses (abrupt) and significant differences in the standardized occurrence of appropriate pauses were consistent with speech processing findings., Conclusions: Results support the hypotheses of core representational and transcoding speech processing deficits in CAS and theoretical coherence of the PM's pause-speech elements with these deficits.
- Published
- 2017
- Full Text
- View/download PDF
50. A Diagnostic Marker to Discriminate Childhood Apraxia of Speech From Speech Delay: I. Development and Description of the Pause Marker.
- Author
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Shriberg LD, Strand EA, Fourakis M, Jakielski KJ, Hall SD, Karlsson HB, Mabie HL, McSweeny JL, Tilkens CM, and Wilson DL
- Subjects
- Apraxias classification, Child, Diagnosis, Differential, Humans, Language Development Disorders classification, Linguistics, Reproducibility of Results, Speech Acoustics, Speech Articulation Tests, Apraxias diagnosis, Language Development Disorders diagnosis
- Abstract
Purpose: The goal of this article (PM I) is to describe the rationale for and development of the Pause Marker (PM), a single-sign diagnostic marker proposed to discriminate early or persistent childhood apraxia of speech from speech delay., Method: The authors describe and prioritize 7 criteria with which to evaluate the research and clinical utility of a diagnostic marker for childhood apraxia of speech, including evaluation of the present proposal. An overview is given of the Speech Disorders Classification System, including extensions completed in the same approximately 3-year period in which the PM was developed., Results: The finalized Speech Disorders Classification System includes a nosology and cross-classification procedures for childhood and persistent speech disorders and motor speech disorders (Shriberg, Strand, & Mabie, 2017). A PM is developed that provides procedural and scoring information, and citations to papers and technical reports that include audio exemplars of the PM and reference data used to standardize PM scores are provided., Conclusions: The PM described here is an acoustic-aided perceptual sign that quantifies one aspect of speech precision in the linguistic domain of phrasing. This diagnostic marker can be used to discriminate early or persistent childhood apraxia of speech from speech delay.
- Published
- 2017
- Full Text
- View/download PDF
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