61 results on '"Munshi SK"'
Search Results
2. Microbial contamination in herbal medicines available in Bangladesh
- Author
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Noor, R, primary, Huda, N, primary, Rahman, F, primary, Bashar, T, primary, and Munshi, SK, primary
- Published
- 2014
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3. Compositional changes in seeds influenced by their positions in different whorls of mature sunflower head
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Munshi, SK, primary, Kaushal, Babita, additional, and Bajaj, RK, additional
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- 2003
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4. Paraneoplastic limbic encephalitis -- case report and review of literature.
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Munshi SK, Thanvi B, Chin SK, Hubbard I, Fletcher A, and Vallance TR
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- 2005
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5. Arterial strokes associated with factor V Leiden mutation.
- Author
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Munshi SK, Hall D, Evans R, and Robinson T
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- 2001
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6. Letter by Khan et al regarding article, "Hospital-level variation in mortality and rehospitalization for Medicare beneficiaries with acute ischemic stroke".
- Author
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Khan SH, Chan D, Dsouza O, Munshi SK, Khan, Shafi Hashmathulla, Chan, Daniel, Dsouza, Olympio, and Munshi, Sunil K
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- 2011
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7. Tenecteplase versus alteplase for thrombolysis in patients selected by use of perfusion imaging within 4·5 h of onset of ischaemic stroke (TASTE): a multicentre, randomised, controlled, phase 3 non-inferiority trial.
- Author
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Parsons MW, Yogendrakumar V, Churilov L, Garcia-Esperon C, Campbell BCV, Russell ML, Sharma G, Chen C, Lin L, Chew BL, Ng FC, Deepak A, Choi PMC, Kleinig TJ, Cordato DJ, Wu TY, Fink JN, Ma H, Phan TG, Markus HS, Molina CA, Tsai CH, Lee JT, Jeng JS, Strbian D, Meretoja A, Arenillas JF, Buck BH, Devlin MJ, Brown H, Butcher KS, O'Brien B, Sabet A, Wijeratne T, Bivard A, Grimley RS, Agarwal S, Munshi SK, Donnan GA, Davis SM, Miteff F, Spratt NJ, and Levi CR
- Subjects
- Humans, Male, Female, Aged, Middle Aged, Thrombolytic Therapy methods, Treatment Outcome, Aged, 80 and over, Tenecteplase therapeutic use, Tenecteplase administration & dosage, Ischemic Stroke drug therapy, Ischemic Stroke diagnostic imaging, Tissue Plasminogen Activator therapeutic use, Tissue Plasminogen Activator administration & dosage, Fibrinolytic Agents therapeutic use, Fibrinolytic Agents administration & dosage, Perfusion Imaging methods
- Abstract
Background: Intravenous tenecteplase increases reperfusion in patients with salvageable brain tissue on perfusion imaging and might have advantages over alteplase as a thrombolytic for ischaemic stroke. We aimed to assess the non-inferiority of tenecteplase versus alteplase on clinical outcomes in patients selected by use of perfusion imaging., Methods: This international, multicentre, open-label, parallel-group, randomised, clinical non-inferiority trial enrolled patients from 35 hospitals in eight countries. Participants were aged 18 years or older, within 4·5 h of ischaemic stroke onset or last known well, were not being considered for endovascular thrombectomy, and met target mismatch criteria on brain perfusion imaging. Patients were randomly assigned (1:1) by use of a centralised web server with randomly permuted blocks to intravenous tenecteplase (0·25 mg/kg) or alteplase (0·90 mg/kg). The primary outcome was the proportion of patients without disability (modified Rankin Scale 0-1) at 3 months, assessed via masked review in both the intention-to-treat and per-protocol populations. We aimed to recruit 832 participants to yield 90% power (one-sided alpha=0·025) to detect a risk difference of 0·08, with an absolute non-inferiority margin of -0·03. The trial was registered with the Australian New Zealand Clinical Trials Registry, ACTRN12613000243718, and the European Union Clinical Trials Register, EudraCT Number 2015-002657-36, and it is completed., Findings: Recruitment ceased early following the announcement of other trial results showing non-inferiority of tenecteplase versus alteplase. Between March 21, 2014, and Oct 20, 2023, 680 patients were enrolled and randomly assigned to tenecteplase (n=339) and alteplase (n=341), all of whom were included in the intention-to-treat analysis (multiple imputation was used to account for missing primary outcome data for five patients). Protocol violations occurred in 74 participants, thus the per-protocol population comprised 601 people (295 in the tenecteplase group and 306 in the alteplase group). Participants had a median age of 74 years (IQR 63-82), baseline National Institutes of Health Stroke Scale score of 7 (4-11), and 260 (38%) were female. In the intention-to-treat analysis, the primary outcome occurred in 191 (57%) of 335 participants allocated to tenecteplase and 188 (55%) of 340 participants allocated to alteplase (standardised risk difference [SRD]=0·03 [95% CI -0·033 to 0·10], one-tailed p
non-inferiority =0·031). In the per-protocol analysis, the primary outcome occurred in 173 (59%) of 295 participants allocated to tenecteplase and 171 (56%) of 306 participants allocated to alteplase (SRD 0·05 [-0·02 to 0·12], one-tailed pnon-inferiority =0·01). Nine (3%) of 337 patients in the tenecteplase group and six (2%) of 340 in the alteplase group had symptomatic intracranial haemorrhage (unadjusted risk difference=0·01 [95% CI -0·01 to 0·03]) and 23 (7%) of 335 and 15 (4%) of 340 died within 90 days of starting treatment (SRD 0·02 [95% CI -0·02 to 0·05])., Interpretation: The findings in our study provide further evidence to strengthen the assertion of the non-inferiority of tenecteplase to alteplase, specifically when perfusion imaging has been used to identify reperfusion-eligible stroke patients. Although non-inferiority was achieved in the per-protocol population, it was not reached in the intention-to-treat analysis, possibly due to sample size limtations. Nonetheless, large-scale implementation of perfusion CT to assist in patient selection for intravenous thrombolysis in the early time window was shown to be feasible., Funding: Australian National Health Medical Research Council; Boehringer Ingelheim., Competing Interests: Declaration of interests MWP is on a Boehringer-Ingelheim Advisory Board for metalyse in stroke. FCN has received grants from the National Health and Medical Research Council of Australia and the National Heart Foundation of Australia. AM participates on an advisory board for Boehringer Ingelheim and is a World Stroke Organisation board member. HSM reports grants from the British Heart Foundation, the Medical Research Council, the Alzheimer's Society, and the Stroke Association UK, and is the editor-in-chief of the World Stroke Organisation journal, International Journal of Stroke. HM has received speaking fees from the Indonesian Stroke Society and reports travel support for investigator meetings. TGP has received speaking fees from Bayer, Boehringer Ingelheim, Pfizer, and BMS. JFA reports consulting fees from Amgen, Medtronic, and BMS-Pfizer, reports speaking fees from Medtronic and BMS–Pfizer, reports travel support from Daiichi–Sankyo, participates on the advisory board for the WE-TRUST trial, and reports research grants from the Spanish Ministry of Science, the European Commission, and Astra Zeneca. RSG has received travel support from Boehringer Ingelheim. SA has received funding from the UK Stroke Clinical Research Network. KSB is in a spousal relationship with an employee of Boehringer Ingelheim and has received speaking fees from Boehringer Ingelheim and AstraZeneca. All other authors report no disclosures., (Copyright © 2024 Elsevier Ltd. All rights reserved, including those for text and data mining, AI training, and similar technologies.)- Published
- 2024
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8. Total Aortic Arch and Neoaortic Root Replacement Following Stage III Palliation for Hypoplastic Left Heart Syndrome.
- Author
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Munshi SK, Generali T, Narayanan A, Correia RJ, Kutty R, and Dhannapuneni R
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- Humans, Female, Adolescent, Hypoplastic Left Heart Syndrome surgery, Aorta, Thoracic surgery, Aorta, Thoracic abnormalities, Norwood Procedures methods, Palliative Care methods
- Abstract
Progressive dilatation of the neoaortic root and reconstructed aortic arch is a serious complication after the Norwood procedure. There are no clear guidelines on the management of this complex anatomy in the setting of single ventricle physiology, and the surgical treatment of such an entity remains anecdotal. We describe a successful surgical repair in a 15-year-old girl presenting with a severely dilated neoaortic root and aortic arch causing compression and narrowing of the left pulmonary artery after successful three-stage palliation for hypoplastic left heart syndrome., Competing Interests: Declaration of Conflicting InterestsThe author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
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- 2024
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9. Modified Senning procedure in a patient with dextrocardia with left atrial isomerism and anomalous systemic venous drainage: a rare case report.
- Author
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Munshi SK, Jones C, and Dhannapuneni R
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- Humans, Female, Transposition of Great Vessels surgery, Transposition of Great Vessels complications, Abnormalities, Multiple surgery, Cardiac Surgical Procedures methods, Dextrocardia complications, Dextrocardia surgery, Heart Atria abnormalities, Heart Atria surgery, Heart Atria diagnostic imaging, Arterial Switch Operation methods
- Abstract
The atrial switch procedure by Senning or Mustard technique primarily aims in correcting parallel systemic and pulmonary circulations at atrial level. This procedure may be used in late presenting D-transposition of great arteries with a deconditioned left ventricle, congenitally corrected transposition of great arteries and isolated ventricular inversion. We describe the case of a child with dextrocardia, left atrial isomerism with complex pulmonary and systemic venous drainage resulting in mixing at atrial level. She was successfully operated by modified Senning procedure performed through the left-sided atrium.
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- 2024
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10. Surgical management of a giant pulmonary artery aneurysm in a patient with ischaemic heart disease - a case report.
- Author
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Munshi SK, Faraz F, and Guerrero R
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- Male, Humans, Aged, Pulmonary Artery diagnostic imaging, Pulmonary Artery surgery, Coronary Aneurysm diagnosis, Coronary Aneurysm diagnostic imaging, Coronary Artery Disease complications, Myocardial Ischemia complications, Myocardial Ischemia surgery, Vascular Malformations complications
- Abstract
Association of Pulmonary Artery Aneurysm with Ischemic Heart Disease is uncommon, and its surgical management has been rarely described in the literature. Surgical intervention should be individualised according to the coexisting diseases and comorbidities to achieve optimal outcome. We report a case of a 76-year-old man with background history of coronary artery stenting due to ischaemic heart disease. The patient presented with features of coronary compression due to giant pulmonary artery aneurysm. He was operated with replacement of aneurysmal pulmonary trunk with 25 mm Hancock conduit.
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- 2023
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11. The prospects of employing probiotics in combating COVID-19.
- Author
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Chakraborty M and Munshi SK
- Abstract
Unanticipated pathogenic risk and emerging transmittable diseases can result from interspecies exchanges of viruses among animals and humans. The emergence of the novel severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) causing coronavirus disease-19 (COVID-19) pandemic has recently exemplified this mechanism. Cough, fever, fatigue, headache, sputum production, hemoptysis, dyspnea, diarrhea, and gastrointestinal disorders are the characteristic features of the disease. The most prevalent and serious manifestation of the infection tends to be pneumonia. The new strains of SARS-CoV-2 with more infectivity have been emerging at regular intervals. There is currently no World Health Organization-approved particular drug for COVID-19. Besides, developing novel antivirals would take much time. Thus, repurposing the application of natural products can provide alternatives and can facilitate medication against COVID-19 as well as can slow down the aggressive progression of the disease before the arrival of approved drugs. Probiotics have long been known for their positive effects on the gut microbiome and impact on immune responses. Particularly, their involvement against viral diseases, especially those of the upper and lower respiratory tract, is of current interest for their prospective application against COVID-19. In this review, we comprehensively address the mode of action of probiotics and their possible intervention against coronavirus diseases correlating with their efficacy against viral diseases. In this regard, we explored recently published relevant research and review articles in MEDLINE/PubMed related to COVID-19 and the effects of probiotics on viral infections., Competing Interests: There are no conflicts of interest., (Copyright: © 2021 Tzu Chi Medical Journal.)
- Published
- 2021
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12. Diabetes mellitus and stroke: A clinical update.
- Author
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Tun NN, Arunagirinathan G, Munshi SK, and Pappachan JM
- Abstract
Cardiovascular disease including stroke is a major complication that tremendously increases the morbidity and mortality in patients with diabetes mellitus (DM). DM poses about four times higher risk for stroke. Cardiometabolic risk factors including obesity, hypertension, and dyslipidaemia often co-exist in patients with DM that add on to stroke risk. Because of the strong association between DM and other stroke risk factors, physicians and diabetologists managing patients should have thorough understanding of these risk factors and management. This review is an evidence-based approach to the epidemiological aspects, pathophysiology, diagnostic work up and management algorithms for patients with diabetes and stroke., Competing Interests: Conflict-of-interest statement: None.
- Published
- 2017
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13. Progressive multifocal leukoencephalopathy masquerading as cerebellar infarction.
- Author
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Willott RH, Sunman W, and Munshi SK
- Subjects
- Aged, Antineoplastic Agents adverse effects, Diagnosis, Differential, Diagnostic Errors, Fatal Outcome, Humans, Immunocompromised Host, JC Virus immunology, JC Virus isolation & purification, Leukoencephalopathy, Progressive Multifocal chemically induced, Leukoencephalopathy, Progressive Multifocal immunology, Leukoencephalopathy, Progressive Multifocal virology, Magnetic Resonance Imaging, Male, Predictive Value of Tests, Risk Factors, Rituximab adverse effects, Tomography, X-Ray Computed, Brain Infarction diagnosis, Cerebellar Diseases diagnosis, Leukoencephalopathy, Progressive Multifocal diagnosis
- Abstract
Progressive neurological signs and symptoms, in immunocompromised individuals, could be due to progressive multifocal leukoencephalopathy (PML). We report the case of a patient who present a stroke unit with symptoms that were consistent initially with a posterior circulation stroke. Prior chemotherapy with Rituximab, for a lymphoma, had predisposed the patient to infection with the JC virus. Physicians need to be aware of the condition, and patients need to aware of these risks of chemotherapy., (© The Author 2016. Published by Oxford University Press on behalf of the British Geriatrics Society. All rights reserved. For Permissions, please email: journals.permissions@oup.com.)
- Published
- 2016
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14. Structure and Function of the Hypertension Variant A486V of G Protein-coupled Receptor Kinase 4.
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Allen SJ, Parthasarathy G, Darke PL, Diehl RE, Ford RE, Hall DL, Johnson SA, Reid JC, Rickert KW, Shipman JM, Soisson SM, Zuck P, Munshi SK, and Lumb KJ
- Subjects
- Amino Acid Sequence, Crystallography, X-Ray, G-Protein-Coupled Receptor Kinase 4 genetics, Humans, Models, Molecular, Molecular Sequence Data, Phosphorylation, Protein Conformation, Sequence Homology, Amino Acid, Substrate Specificity, G-Protein-Coupled Receptor Kinase 4 chemistry, G-Protein-Coupled Receptor Kinase 4 metabolism, Hypertension genetics
- Abstract
G-protein-coupled receptor (GPCR) kinases (GRKs) bind to and phosphorylate GPCRs, initiating the process of GPCR desensitization and internalization. GRK4 is implicated in the regulation of blood pressure, and three GRK4 polymorphisms (R65L, A142V, and A486V) are associated with hypertension. Here, we describe the 2.6 Å structure of human GRK4α A486V crystallized in the presence of 5'-adenylyl β,γ-imidodiphosphate. The structure of GRK4α is similar to other GRKs, although slight differences exist within the RGS homology (RH) bundle subdomain, substrate-binding site, and kinase C-tail. The RH bundle subdomain and kinase C-terminal lobe form a strikingly acidic surface, whereas the kinase N-terminal lobe and RH terminal subdomain surfaces are much more basic. In this respect, GRK4α is more similar to GRK2 than GRK6. A fully ordered kinase C-tail reveals interactions linking the C-tail with important determinants of kinase activity, including the αB helix, αD helix, and the P-loop. Autophosphorylation of wild-type GRK4α is required for full kinase activity, as indicated by a lag in phosphorylation of a peptide from the dopamine D1 receptor without ATP preincubation. In contrast, this lag is not observed in GRK4α A486V. Phosphopeptide mapping by mass spectrometry indicates an increased rate of autophosphorylation of a number of residues in GRK4α A486V relative to wild-type GRK4α, including Ser-485 in the kinase C-tail., (© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.)
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- 2015
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15. Microbiological profiling and the demonstration of in vitro anti-bacterial traits of the major oral herbal medicines used in Dhaka Metropolis.
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Sharmin M, Nur IT, Acharjee M, Munshi SK, and Noor R
- Abstract
Present study attempted to assess the level of microbiological contamination in oral herbal medicines, frequently used for medications, through conventional cultural and biochemical tests along with the antibiogram of the isolates. Moreover, the anti-bacterial potential of the herbal medicines was also aimed to be checked by the agar well diffusion method and minimum inhibitory concentration (MIC) assay. Out of 10 categories of liquid oral herbal medicine samples (n = 50) studied, all were found to be contaminated with bacteria (10(3)-10(5) cfu/mL), specifically with Staphylococcus spp. in 8 samples; while 2 samples harbored Klebsiella spp. Fungal presence was observed only in one sample. Study of antibiogram revealed Klebsiella spp. to be strongly resistant against penicillin G and erythromycin, whereas S. aureus possessed 80% sensitivity. The in vitro anti-bacterial activity was observed in 7 samples. Of them, one sample was found to exhibit the activity against almost all the test bacteria and another was found effective against 5 out of 8 test bacteria. Five samples showed the activity within a minor range while 3 samples were devoid of such trait. Samples 2 and 4 were found to stall the bacterial growth below 10 mg/mL of concentration in MIC test. Overall, the prevalence of specific pathogens was not so significant in the samples studied as well as only one drug-resistant isolate was identified. Besides, the anti-bacterial trait of 5 samples indicated that most of herbal medicines might be considered effective for medication.
- Published
- 2014
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16. Molecular approaches for detection of the multi-drug resistant tuberculosis (MDR-TB) in Bangladesh.
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Aurin TH, Munshi SK, Kamal SM, Rahman MM, Hossain MS, Marma T, Rahman F, and Noor R
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- Bangladesh, Drug Resistance, Multiple, Bacterial drug effects, Humans, Microbial Sensitivity Tests, Mycobacterium tuberculosis drug effects, Mycobacterium tuberculosis genetics, Mycobacterium tuberculosis isolation & purification, Polymerase Chain Reaction, Rifampin pharmacology, Rifampin therapeutic use, Tuberculosis, Multidrug-Resistant drug therapy, Tuberculosis, Multidrug-Resistant microbiology, Molecular Diagnostic Techniques methods, Tuberculosis, Multidrug-Resistant diagnosis
- Abstract
The principal obstacles in the treatment of tuberculosis (TB) are delayed and inaccurate diagnosis which often leads to the onset of the drug resistant TB cases. To avail the appropriate treatment of the patients and to hinder the transmission of drug-resistant TB, accurate and rapid detection of resistant isolates is critical. Present study was designed to demonstrate the efficacy of molecular techniques inclusive of line probe assay (LPA) and GeneXpert MTB/RIF methods for the detection of multi-drug resistant (MDR) TB. Sputum samples from 300 different categories of treated and new TB cases were tested for the detection of possible mutation in the resistance specific genes (rpoB, inhA and katG) through Genotype MTBDRplus assay or LPA and GeneXpert MTB/RIF tests. Culture based conventional drug susceptibility test (DST) was also carried out to measure the efficacy of the molecular methods employed. Among 300 samples, 191 (63.7%) and 193 (64.3%) cases were found to be resistant against rifampicin in LPA and GeneXpert methods, respectively; while 189 (63%) cases of rifampicin resistance were detected by conventional DST methods. On the other hand, 196 (65.3%) and 191 (63.7%) isolates showed isoniazid resistance as detected by LPA and conventional drug susceptibility test (DST), respectively. Among the drug resistant isolates (collectively 198 in LPA and 193 in conventional DST), 189 (95.6%) and 187 (96.9%) were considered to be MDR as examined by LPA and conventional DST, respectively. Category-II and -IV patients encountered higher frequency of drug resistance compared to those from category-I and new cases. Considering the higher sensitivity, specificity and accuracy along with the required time to results significantly shorter, our study supports the adoption of LPA and GeneXpert assay as efficient tools in detecting drug resistant TB in Bangladesh.
- Published
- 2014
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17. Microbial contamination in herbal medicines available in Bangladesh.
- Author
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Noor R, Huda N, Rahman F, Bashar T, and Munshi SK
- Subjects
- Bangladesh, Colony Count, Microbial, Cross-Sectional Studies, Drug Contamination, Plant Preparations
- Abstract
Plants have long been used as herbal medicines in many countries. However, microbial contamination of these medicines may affect human health. Present study was performed to assess the pathogenic proliferation in the locally available commercial herbal oral medicines. The pathogenic load was compared with the microbiological standard given by the British Pharmacopoeia. Out of 85 oral liquid samples, 2 were found to be highly contaminated with a total aerobic bacterial load of 1.24 x 10(5) cfu/ml, 10 samples were contaminated with fungi (1.2 x 10(4)-6.3 x 10(4) cfu/ml). Tests for specific pathogens were carried out. One sample showed contamination by coliforms but none of the samples were contaminated by Salmonella spp. and Shigella spp. Among 40 semisolid samples, one showed to be contaminated with bacteria (1.93 x 10(5) cfu/g) and 5 samples consisted of fungal load ranging between 1.5 x 10(4)-2.2 x 10(4) cfu/g. The presence of bacteria and fungi in these samples thus suggest the fact that aseptic handling is necessary during processing of oral herbal medicines.
- Published
- 2013
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18. Evaluation of the effectiveness of BACTEC MGIT 960 for the detection of mycobacteria in Bangladesh.
- Author
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Hasan M, Munshi SK, Banu Momi MS, Rahman F, and Noor R
- Abstract
Objective: Tuberculosis (TB) caused by Mycobacterium tuberculosis has been identified as a re-emerging infectious disease with public health importance globally. Exploitation of new laboratory techniques for precise identification of mycobacteria in clinical specimens is of great importance to improve the diagnosis as part of the global TB control efforts., Methods: The current study was conducted for the evaluation of BACTEC MGIT 960 method in comparison with Lowenstein-Jensen (LJ) culture and light emitting diode (LED) fluorescence microscopy for isolation of mycobacteria among TB suspects from Bangladesh. A total of 421 specimens were tested with these methods., Results: Among the tested samples, 3.6% (n=15) were LED fluorescence microscopy positive; while 18 (4.2%) and 45 (10.6%) were recovered from LJ and MGIT 960 culture. The relative positivity found through MGIT 960 system were 60% and 66.7% higher than that of LJ culture and LED fluorescence microscopy, respectively. Recovery rate of Mycobacterium tuberculosis complex ([MTC], 21 by MGIT and 16 by LJ culture) and non-tubercular mycobacteria ([NTM], 24 by MGIT and 2 by LJ culture) by MGIT 960 was 24% and 96% greater, respectively than LJ culture. Moreover, MGIT 960 was found to be highly sensitive (100%), specific (93.3%), accurate (93.6%) and a more rapid method in detecting mycobacteria when compared with LJ culture., Conclusion: Extended recovery of NTM and MTC through MGIT 960 urged frequent application of this method to detect mycobacteria more effectively and rapidly., (Copyright © 2013 Asian-African Society for Mycobacteriology. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2013
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19. Slide drug susceptibility test for the detection of multidrug-resistant tuberculosis in Bangladesh.
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Noor R, Hossain A, Munshi SK, Rahman F, and Kamal SM
- Subjects
- Bangladesh, Humans, Microbial Sensitivity Tests methods, Sensitivity and Specificity, Tuberculosis, Multidrug-Resistant diagnosis, Antitubercular Agents pharmacology, Mycobacterium tuberculosis drug effects, Mycobacterium tuberculosis isolation & purification, Tuberculosis, Multidrug-Resistant microbiology
- Abstract
The present study attempted to comparatively assess and establish a suitable detection method of multidrug-resistant tuberculosis (MDR-TB) from previously treated TB cases in Bangladesh. Of 130 Zeihl-Neelsen smear-positive fresh sputum specimens, 112 samples were found to contain viable bacilli as visualized under the light-emitting diode fluorescence microscope after fluorescein di-acetate staining, and 109 positive cases were detected through Löwenstein-Jensen culture. The samples were further tested to survey the drug resistance both by slide drug susceptibility test (DST) and by conventional DST: 94 MDR-TB cases were detected within 10 days through the slide DST, whereas 82 cases were observed through the conventional DST, requiring about 3 months. Because the rapidity, sensitivity and accuracy of the slide DST method were found to be comparatively satisfactory when compared to the conventional DST method; we recommend the slide DST method as the standard diagnostic tool in perspective of Bangladesh for the detection of MDR-TB.
- Published
- 2013
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20. Editorial comment to prostate cancer may trigger paraneoplastic limbic encephalitis: a case report and a review of the literature.
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Munshi SK and Raghunathan SK
- Subjects
- Humans, Male, Limbic Encephalitis etiology, Limbic Encephalitis pathology, Magnetic Resonance Imaging, Prostatic Neoplasms complications
- Published
- 2013
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21. Don't neglect 'neglect'- an update on post stroke neglect.
- Author
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Maxton C, Dineen RA, Padamsey RC, and Munshi SK
- Subjects
- Combined Modality Therapy, Exercise Therapy methods, Feedback, Sensory physiology, Humans, Imagery, Psychotherapy methods, Neuroimaging methods, Neurologic Examination methods, Perceptual Disorders diagnosis, Perceptual Disorders therapy, Physical Therapy Modalities, Sensory Deprivation, Vision Disorders diagnosis, Vision Disorders etiology, Vision Disorders therapy, Visual Fields, Perceptual Disorders etiology, Stroke complications
- Abstract
Objectives: Post-stroke neglect is common and an independent predictor of functional outcome. Assessment of neglect is very demanding, the treatment extremely difficult and the literature vast; we performed a literature search for all aspects of this difficult subject., Methods: We searched the PubMed, EMBASE databases and historical manuals for authoritative studies on post stroke neglect between 1951 and 2011., Findings: There is a great dearth of randomised controlled data on neglect because standardised assessment does not occur frequently. Eighty-eight manuscripts were identified in the literature, which were quite heterogeneous in their content and addressing diverse aspects of this clinical entity., Interpretation and Implications: The most important historical papers were selected along with the most widely accepted and proven strategies for assessment and treatment. Standardised assessment of neglect does not always occur, but several useful strategies are available and are described in the following sections., (© 2013 Blackwell Publishing Ltd.)
- Published
- 2013
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22. Frequency of extensively drug-resistant tuberculosis (XDR-TB) among re-treatment cases in NIDCH, Dhaka, Bangladesh.
- Author
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Noor R, Akhter S, Rahman F, Munshi SK, Kamal SM, and Feroz F
- Subjects
- Bacteriological Techniques, Bangladesh, Extensively Drug-Resistant Tuberculosis diagnosis, Humans, Microscopy, Fluorescence, Retreatment, Antitubercular Agents therapeutic use, Extensively Drug-Resistant Tuberculosis drug therapy, Extensively Drug-Resistant Tuberculosis microbiology
- Abstract
Emergence of extensively drug-resistant (XDR) tuberculosis (TB) in Bangladesh has increased as a result of the inadequate management of TB-infected individuals. The present study attempted to detect the frequency of multidrug resistance (MDR) among the TB patients categorically from relapse, category I failure, category II failure, and return after default category I and II cases, using the conventional drug susceptibility test. Among 100 sputum specimens from all four categories, 81 and 84 positive cases were identified under light-emitting diode fluorescence microscope and the Lowenstein-Jensen (L-J) culture method, respectively. Of 84 culture-positive cases, elevated resistance was observed against isoniazid (89.3 %) and rifampicin (91.7 %) compared to that against streptomycin (53.6 %) and ethambutol (47.7 %). Resistance against ofloxacin, gatifloxacin, and kanamycin was 8.3, 5.9, and 2.4 %, consecutively. Fifty-nine cases were found to be MDR-TB. Two of these cases, which showed resistance against kanamycin and ofloxacin, were further identified as XDR. The proportion of XDR cases was more likely to be in the return after default category I and II cases.
- Published
- 2013
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23. Comparisons among the diagnostic methods used for the detection of extra-pulmonary tuberculosis in Bangladesh.
- Author
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Munshi SK, Rahman F, Mostofa Kamal SM, and Noor R
- Abstract
The present study was an attempt to establish a suitable method for the effective diagnosis of extra-pulmonary tuberculosis in Bangladesh. In this regard, detection of Mycobacterium tuberculosis from 390 different extra-pulmonary specimens was performed by Bright-Field microscopy, light-emitting diode fluorescence microscopy and Lowenstein-Jensen culture methods, followed by an extensive comparison among these methods. M. tuberculosis was detected in 53 cases through the conventional Lowenstein-Jensen culture method; 49 cases were detected under Bright-Field microscope, whereas the light-emitting diode fluorescence microscopy detected 64 cases. Out of 53 culture-positive isolates, 12 were found to be multi-drug resistant. Light-emitting diode fluorescence microscopy was found to be more sensitive and effective than both the Bright-Field microscopy and the Lowenstein-Jensen culture methods. Incidentally, light-emitting diode fluorescence microscopy appeared imperative to detecting the multi-drug resistant tuberculosis., (Copyright © 2012 Asian-African Society for Mycobacteriology. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2012
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24. Advances in spontaneous intracerebral haemorrhage.
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Thanvi BR, Sprigg N, and Munshi SK
- Subjects
- Anticonvulsants therapeutic use, Antihypertensive Agents therapeutic use, Biomarkers, Brain Edema therapy, Cerebral Hemorrhage diagnosis, Cerebral Hemorrhage etiology, Diuretics, Osmotic therapeutic use, Hemostatics therapeutic use, Humans, Hypertension prevention & control, Mannitol therapeutic use, Prognosis, Risk Assessment, Thrombectomy methods, Cerebral Hemorrhage therapy
- Abstract
Objectives: To assess the evidence and available literature on the clinical, pathogenetic, prognostic and therapeutic aspects of intracerebral haemorrhage., Methods: The most important manuscripts and reviews on the subject were considered. Information was collected from Medline, Embase & National Library of Medicine over the last 40 years up to Oct 2011. The bibliographies of relevant articles were searched for additional references. The most up to date and randomised trials were given preference. Clinical guidelines including AHA/ASA, Royal college of Physicians, NICE, Scottish Intercollegiate guidelines and several others were taken into consideration., Findings: There are numerous advances in the understanding of the pathogenesis and management, but hardly any change in the overall mortality in the last few decades. There is a poor understanding of the results of surgical trials that has resulted in a large drop in surgical intervention since 2007. INTERPRETATIONS AND IMPLICATIONS: Advances in neuroimaging and neurophysiology have improved our understanding of the mechanisms of neuronal injury and existence of perihaematomal 'tissue at risk'. Numerous new therapeutic targets have been identified. There is a lot of misunderstanding of the results of the newer surgical trials which need to be clarified. The importance of cerebral amyloid angiopathy and microbleeds in older patients is increasingly recognised. Control of hypertension is the most important public health measure. Stroke units provide the best outcomes for the patients., (© 2012 Blackwell Publishing Ltd.)
- Published
- 2012
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25. Structural basis for selective small molecule kinase inhibition of activated c-Met.
- Author
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Rickert KW, Patel SB, Allison TJ, Byrne NJ, Darke PL, Ford RE, Guerin DJ, Hall DL, Kornienko M, Lu J, Munshi SK, Reid JC, Shipman JM, Stanton EF, Wilson KJ, Young JR, Soisson SM, and Lumb KJ
- Subjects
- Animals, Cell Line, Crystallography, X-Ray, Drug Design, Humans, Phosphorylation, Protein Binding, Protein Structure, Secondary, Protein Structure, Tertiary, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins metabolism, Receptor Protein-Tyrosine Kinases genetics, Receptor Protein-Tyrosine Kinases metabolism, Spodoptera, Structure-Activity Relationship, c-Mer Tyrosine Kinase, Protein Kinase Inhibitors chemistry, Proto-Oncogene Proteins antagonists & inhibitors, Proto-Oncogene Proteins chemistry, Receptor Protein-Tyrosine Kinases antagonists & inhibitors, Receptor Protein-Tyrosine Kinases chemistry
- Abstract
The receptor tyrosine kinase c-Met is implicated in oncogenesis and is the target for several small molecule and biologic agents in clinical trials for the treatment of cancer. Binding of the hepatocyte growth factor to the cell surface receptor of c-Met induces activation via autophosphorylation of the kinase domain. Here we describe the structural basis of c-Met activation upon autophosphorylation and the selective small molecule inhibiton of autophosphorylated c-Met. MK-2461 is a potent c-Met inhibitor that is selective for the phosphorylated state of the enzyme. Compound 1 is an MK-2461 analog with a 20-fold enthalpy-driven preference for the autophosphorylated over unphosphorylated c-Met kinase domain. The crystal structure of the unbound kinase domain phosphorylated at Tyr-1234 and Tyr-1235 shows that activation loop phosphorylation leads to the ejection and disorder of the activation loop and rearrangement of helix αC and the G loop to generate a viable active site. Helix αC adopts a orientation different from that seen in activation loop mutants. The crystal structure of the complex formed by the autophosphorylated c-Met kinase domain and compound 1 reveals a significant induced fit conformational change of the G loop and ordering of the activation loop, explaining the selectivity of compound 1 for the autophosphorylated state. The results highlight the role of structural plasticity within the kinase domain in imparting the specificity of ligand binding and provide the framework for structure-guided design of activated c-Met inhibitors.
- Published
- 2011
- Full Text
- View/download PDF
26. Genetic and pharmacological inhibition of PDK1 in cancer cells: characterization of a selective allosteric kinase inhibitor.
- Author
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Nagashima K, Shumway SD, Sathyanarayanan S, Chen AH, Dolinski B, Xu Y, Keilhack H, Nguyen T, Wiznerowicz M, Li L, Lutterbach BA, Chi A, Paweletz C, Allison T, Yan Y, Munshi SK, Klippel A, Kraus M, Bobkova EV, Deshmukh S, Xu Z, Mueller U, Szewczak AA, Pan BS, Richon V, Pollock R, Blume-Jensen P, Northrup A, and Andersen JN
- Subjects
- Allosteric Regulation drug effects, Allosteric Regulation genetics, Animals, Catalytic Domain genetics, Cell Line, Tumor, Cell Proliferation drug effects, Crystallography, X-Ray, Dogs, Drug Screening Assays, Antitumor methods, Humans, Neoplasm Proteins genetics, Neoplasm Proteins metabolism, Neoplasms genetics, Phosphorylation drug effects, Phosphorylation genetics, Protein Serine-Threonine Kinases genetics, Protein Serine-Threonine Kinases metabolism, Pyruvate Dehydrogenase Acetyl-Transferring Kinase, Neoplasm Proteins antagonists & inhibitors, Neoplasms drug therapy, Neoplasms enzymology, Protein Kinase Inhibitors chemistry, Protein Kinase Inhibitors pharmacology, Protein Serine-Threonine Kinases antagonists & inhibitors
- Abstract
Phosphoinositide-dependent kinase 1 (PDK1) is a critical activator of multiple prosurvival and oncogenic protein kinases and has garnered considerable interest as an oncology drug target. Despite progress characterizing PDK1 as a therapeutic target, pharmacological support is lacking due to the prevalence of nonspecific inhibitors. Here, we benchmark literature and newly developed inhibitors and conduct parallel genetic and pharmacological queries into PDK1 function in cancer cells. Through kinase selectivity profiling and x-ray crystallographic studies, we identify an exquisitely selective PDK1 inhibitor (compound 7) that uniquely binds to the inactive kinase conformation (DFG-out). In contrast to compounds 1-5, which are classical ATP-competitive kinase inhibitors (DFG-in), compound 7 specifically inhibits cellular PDK1 T-loop phosphorylation (Ser-241), supporting its unique binding mode. Interfering with PDK1 activity has minimal antiproliferative effect on cells growing as plastic-attached monolayer cultures (i.e. standard tissue culture conditions) despite reduced phosphorylation of AKT, RSK, and S6RP. However, selective PDK1 inhibition impairs anchorage-independent growth, invasion, and cancer cell migration. Compound 7 inhibits colony formation in a subset of cancer cell lines (four of 10) and primary xenograft tumor lines (nine of 57). RNAi-mediated knockdown corroborates the PDK1 dependence in cell lines and identifies candidate biomarkers of drug response. In summary, our profiling studies define a uniquely selective and cell-potent PDK1 inhibitor, and the convergence of genetic and pharmacological phenotypes supports a role of PDK1 in tumorigenesis in the context of three-dimensional in vitro culture systems.
- Published
- 2011
- Full Text
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27. Cerebral misery perfusion diagnosed using hypercapnic blood-oxygenation-level-dependent contrast functional magnetic resonance imaging: a case report.
- Author
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Gordon AL, Goode S, D'Souza O, Auer DP, and Munshi SK
- Abstract
Introduction: Cerebral misery perfusion represents a failure of cerebral autoregulation. It is an important differential diagnosis in post-stroke patients presenting with collapses in the presence of haemodynamically significant cerebrovascular stenosis. This is particularly the case when cortical or internal watershed infarcts are present. When this condition occurs, further investigation should be done immediately., Case Presentation: A 50-year-old Caucasian man presented with a stroke secondary to complete occlusion of his left internal carotid artery. He went on to suffer recurrent seizures. Neuroimaging demonstrated numerous new watershed-territory cerebral infarcts. No source of arterial thromboembolism was demonstrable. Hypercapnic blood-oxygenation-level-dependent-contrast functional magnetic resonance imaging was used to measure his cerebrovascular reserve capacity. The findings were suggestive of cerebral misery perfusion., Conclusions: Blood-oxygenation-level-dependent-contrast functional magnetic resonance imaging allows the inference of cerebral misery perfusion. This procedure is cheaper and more readily available than positron emission tomography imaging, which is the current gold standard diagnostic test. The most evaluated treatment for cerebral misery perfusion is extracranial-intracranial bypass. Although previous trials of this have been unfavourable, the results of new studies involving extracranial-intracranial bypass in high-risk patients identified during cerebral perfusion imaging are awaited.Cerebral misery perfusion is an important and under-recognized condition in which emerging imaging and treatment modalities present the possibility of practical and evidence-based management in the near future. Physicians should thus be aware of this disorder and of recent developments in diagnostic tests that allow its detection.
- Published
- 2010
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28. Structural basis of human p70 ribosomal S6 kinase-1 regulation by activation loop phosphorylation.
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Sunami T, Byrne N, Diehl RE, Funabashi K, Hall DL, Ikuta M, Patel SB, Shipman JM, Smith RF, Takahashi I, Zugay-Murphy J, Iwasawa Y, Lumb KJ, Munshi SK, and Sharma S
- Subjects
- Chromatography, Gel, Crystallography, X-Ray, Humans, Phosphorylation, Polymerase Chain Reaction, Protein Binding, Protein Multimerization, Protein Structure, Secondary, Ribosomal Protein S6 Kinases, 70-kDa genetics, Ribosomal Protein S6 Kinases, 70-kDa metabolism, Staurosporine metabolism, Ultracentrifugation, Ribosomal Protein S6 Kinases, 70-kDa chemistry
- Abstract
p70 ribosomal S6 kinase (p70S6K) is a downstream effector of the mTOR signaling pathway involved in cell proliferation, cell growth, cell-cycle progression, and glucose homeostasis. Multiple phosphorylation events within the catalytic, autoinhibitory, and hydrophobic motif domains contribute to the regulation of p70S6K. We report the crystal structures of the kinase domain of p70S6K1 bound to staurosporine in both the unphosphorylated state and in the 3'-phosphoinositide-dependent kinase-1-phosphorylated state in which Thr-252 of the activation loop is phosphorylated. Unphosphorylated p70S6K1 exists in two crystal forms, one in which the p70S6K1 kinase domain exists as a monomer and the other as a domain-swapped dimer. The crystal structure of the partially activated kinase domain that is phosphorylated within the activation loop reveals conformational ordering of the activation loop that is consistent with a role in activation. The structures offer insights into the structural basis of the 3'-phosphoinositide-dependent kinase-1-induced activation of p70S6K and provide a platform for the rational structure-guided design of specific p70S6K inhibitors.
- Published
- 2010
- Full Text
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29. A conformational constraint improves a beta-secretase inhibitor but for an unexpected reason.
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Hills ID, Holloway MK, de León P, Nomland A, Zhu H, Rajapakse H, Allison TJ, Munshi SK, Colussi D, Pietrak BL, Toolan D, Haugabook SJ, Graham SL, and Stachel SJ
- Subjects
- ATP Binding Cassette Transporter, Subfamily B, Member 1 metabolism, Amyloid Precursor Protein Secretases metabolism, Binding Sites, Catalytic Domain, Crystallography, X-Ray, Drug Design, Humans, Imidazoles chemical synthesis, Imidazoles pharmacology, Molecular Conformation, Protease Inhibitors chemical synthesis, Protease Inhibitors pharmacology, Protein Structure, Tertiary, Amyloid Precursor Protein Secretases antagonists & inhibitors, Imidazoles chemistry, Protease Inhibitors chemistry
- Abstract
During our ongoing efforts to develop a small molecule inhibitor targeting the beta-amyloid cleaving enzyme (BACE-1), we discovered a class of compounds bearing an aminoimidazole motif. Initial optimization led to potent compounds that have high Pgp efflux ratios. Crystal structure-aided design furnished conformationally constrained compounds that are both potent and have relatively low Pgp efflux ratios. Computational studies performed after these optimizations suggest that the introduction of the constraint enhances potency via additional hydrophobic interactions rather than conformational restriction.
- Published
- 2009
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30. Fragment-based discovery of nonpeptidic BACE-1 inhibitors using tethering.
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Yang W, Fucini RV, Fahr BT, Randal M, Lind KE, Lam MB, Lu W, Lu Y, Cary DR, Romanowski MJ, Colussi D, Pietrak B, Allison TJ, Munshi SK, Penny DM, Pham P, Sun J, Thomas AE, Wilkinson JM, Jacobs JW, McDowell RS, and Ballinger MD
- Subjects
- Amyloid Precursor Protein Secretases chemistry, Amyloid Precursor Protein Secretases genetics, Amyloid Precursor Protein Secretases metabolism, Biocatalysis, Catalytic Domain, Cysteine, Drug Evaluation, Preclinical, Enzyme Inhibitors metabolism, Humans, Ligands, Models, Molecular, Molecular Conformation, Mutation, Peptides chemistry, Piperidines chemistry, Piperidines metabolism, Structure-Activity Relationship, Amyloid Precursor Protein Secretases antagonists & inhibitors, Drug Discovery methods, Enzyme Inhibitors chemistry, Enzyme Inhibitors pharmacology
- Abstract
BACE-1 (beta-site amyloid precursor protein cleaving enzyme), a prominent target in Alzheimer's disease drug discovery efforts, was surveyed using Tethering technology to discover small molecule fragment ligands that bind to the enzyme active site. Screens of a library of >15000 thiol-containing fragments versus a panel of BACE-1 active site cysteine mutants under redox-controlled conditions revealed several novel amine-containing fragments that could be selectively captured by subsets of the tethering sites. For one such hit class, defined by a central aminobenzylpiperidine (ABP) moiety, X-ray crystal structures of BACE mutant-disulfide conjugates revealed that the fragment bound by engaging both catalytic aspartates with hydrogen bonds. The affinities of ABP fragments were improved by structure-guided chemistry, first for conjugation as thiol-containing fragments and then for stand-alone, noncovalent inhibition of wild-type (WT) BACE-1 activity. Crystallography confirmed that the inhibitors bound in exactly the same mode as the disulfide-conjugated fragments that were originally selected from the screen. The ABP ligands represent a new type of nonpeptidic BACE-1 inhibitor motif that has not been described in the aspartyl protease literature and may serve as a starting point for the development of BACE-1-directed Alzheimer's disease therapeutics.
- Published
- 2009
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31. Discovery of aminoheterocycles as a novel beta-secretase inhibitor class: pH dependence on binding activity part 1.
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Stachel SJ, Coburn CA, Rush D, Jones KL, Zhu H, Rajapakse H, Graham SL, Simon A, Katharine Holloway M, Allison TJ, Munshi SK, Espeseth AS, Zuck P, Colussi D, Wolfe A, Pietrak BL, Lai MT, and Vacca JP
- Subjects
- Amyloid Precursor Protein Secretases metabolism, Crystallography, X-Ray, Drug Design, Enzyme Inhibitors pharmacology, Heterocyclic Compounds pharmacology, Hydrogen-Ion Concentration, Protein Binding, Structure-Activity Relationship, Amyloid Precursor Protein Secretases antagonists & inhibitors, Enzyme Inhibitors chemistry, Heterocyclic Compounds chemistry
- Abstract
We have developed a novel series of heteroaromatic BACE-1 inhibitors. These inhibitors interact with the enzyme in a unique fashion that allows for potent binding in a non-traditional paradigm. In addition to the elucidation of their binding profile, we have discovered a pH dependent effect on the binding affinity as a result of the intrinsic pK(a) of these inhibitors and the pH of the BACE-1 enzyme binding assay.
- Published
- 2009
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32. Development of thioquinazolinones, allosteric Chk1 kinase inhibitors.
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Converso A, Hartingh T, Garbaccio RM, Tasber E, Rickert K, Fraley ME, Yan Y, Kreatsoulas C, Stirdivant S, Drakas B, Walsh ES, Hamilton K, Buser CA, Mao X, Abrams MT, Beck SC, Tao W, Lobell R, Sepp-Lorenzino L, Zugay-Murphy J, Sardana V, Munshi SK, Jezequel-Sur SM, Zuck PD, and Hartman GD
- Subjects
- Binding Sites, Checkpoint Kinase 1, Combinatorial Chemistry Techniques, Crystallography, X-Ray, Humans, Molecular Conformation, Molecular Structure, Protein Kinase Inhibitors chemistry, Protein Kinases chemistry, Protein Kinases metabolism, Quinazolines chemistry, Protein Kinase Inhibitors chemical synthesis, Protein Kinase Inhibitors pharmacology, Protein Kinases drug effects, Quinazolines chemical synthesis, Quinazolines pharmacology
- Abstract
A high throughput screening campaign was designed to identify allosteric inhibitors of Chk1 kinase by testing compounds at high concentration. Activity was then observed at K(m) for ATP and at near-physiological concentrations of ATP. This strategy led to the discovery of a non-ATP competitive thioquinazolinone series which was optimized for potency and stability. An X-ray crystal structure for the complex of our best inhibitor bound to Chk1 was solved, indicating that it binds to an allosteric site approximately 13A from the ATP binding site. Preliminary data is presented for several of these compounds.
- Published
- 2009
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- View/download PDF
33. Structure of human prostasin, a target for the regulation of hypertension.
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Rickert KW, Kelley P, Byrne NJ, Diehl RE, Hall DL, Montalvo AM, Reid JC, Shipman JM, Thomas BW, Munshi SK, Darke PL, and Su HP
- Subjects
- Amino Acid Sequence, Apoproteins chemistry, Benzamidines, Crystallography, X-Ray methods, Escherichia coli metabolism, Guanidines chemistry, Humans, Molecular Conformation, Molecular Sequence Data, Protein Conformation, Protein Folding, Protein Renaturation, Sequence Homology, Amino Acid, Serine Endopeptidases genetics, Substrate Specificity, Hypertension metabolism, Serine Endopeptidases chemistry
- Abstract
Prostasin (also called channel activating protease-1 (CAP1)) is an extracellular serine protease implicated in the modulation of fluid and electrolyte regulation via proteolysis of the epithelial sodium channel. Several disease states, particularly hypertension, can be affected by modulation of epithelial sodium channel activity. Thus, understanding the biochemical function of prostasin and developing specific agents to inhibit its activity could have a significant impact on a widespread disease. We report the expression of the prostasin proenzyme in Escherichia coli as insoluble inclusion bodies, refolding and activating via proteolytic removal of the N-terminal propeptide. The refolded and activated enzyme was shown to be pure and monomeric, with kinetic characteristics very similar to prostasin expressed from eukaryotic systems. Active prostasin was crystallized, and the structure was determined to 1.45 A resolution. These apoprotein crystals were soaked with nafamostat, allowing the structure of the inhibited acyl-enzyme intermediate structure to be determined to 2.0 A resolution. Comparison of the inhibited and apoprotein forms of prostasin suggest a mechanism of regulation through stabilization of a loop which interferes with substrate recognition.
- Published
- 2008
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34. Effect of biotin supplementation on hoof health and ceramide composition in dairy cattle.
- Author
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Randhawa SS, Dua K, Randhawa CS, Randhawa SS, and Munshi SK
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- Animals, Cattle, Cattle Diseases metabolism, Cattle Diseases pathology, Dietary Supplements, Female, Foot Diseases metabolism, Foot Diseases pathology, Foot Diseases prevention & control, Hoof and Claw metabolism, Lameness, Animal metabolism, Lameness, Animal pathology, Lameness, Animal prevention & control, Biotin administration & dosage, Cattle Diseases prevention & control, Ceramides metabolism, Foot Diseases veterinary, Hoof and Claw drug effects, Vitamin B Complex administration & dosage
- Abstract
The effect of biotin supplementation on various foot lesions and hoof ceramide composition of toe (wall) and sole portions of hooves was studied in crossbred dairy cattle. Biotin supplementation was done for five months in 14 cattle at a farm and the other 14 animals kept as control. A significant decline was observed in heel erosions and sole avulsions along with total disappearance of white line fissures and double soles in the biotin supplemented cattle resulting in decrease in the overall disease score. Thin layer chromatographs of the hoof lipids revealed 11 types of ceramides in sole lipids and 6 types of ceramides in toe (wall) lipids. The ceramides were typed and identified according to their Rf values. A qualitative increase in the density of thin layer chromatographs of sole lipids was observed in biotin supplemented cattle whereas a non-significant difference in density of thin layer chromatographs of toe lipids was observed after supplementation of biotin.
- Published
- 2008
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35. Crystal structures of the N-terminal kinase domain of human RSK1 bound to three different ligands: Implications for the design of RSK1 specific inhibitors.
- Author
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Ikuta M, Kornienko M, Byrne N, Reid JC, Mizuarai S, Kotani H, and Munshi SK
- Subjects
- Adenosine Triphosphate chemistry, Adenosine Triphosphate metabolism, Amino Acid Motifs, Binding Sites, Catalytic Domain, Crystallography, X-Ray, Humans, Hydrophobic and Hydrophilic Interactions, Ligands, Models, Molecular, Protein Conformation, Protein Structure, Secondary, Protein Structure, Tertiary, Purines metabolism, Ribosomal Protein S6 Kinases, 90-kDa metabolism, Staurosporine metabolism, Adenosine Triphosphate analogs & derivatives, Purines chemistry, Ribosomal Protein S6 Kinases, 90-kDa chemistry, Staurosporine chemistry
- Abstract
The p90 ribosomal S6 kinases (RSKs) also known as MAPKAP-Ks are serine/threonine protein kinases that are activated by ERK or PDK1 and act as downstream effectors of mitogen-activated protein kinase (MAPK). RSK1, a member of the RSK family, contains two distinct kinase domains in a single polypeptide chain, the regulatory C-terminal kinase domain (CTKD) and the catalytic N-terminal kinase domain (NTKD). Autophosphorylation of the CTKD leads to activation of the NTKD that subsequently phosphorylates downstream substrates. Here we report the crystal structures of the unactivated RSK1 NTKD bound to different ligands at 2.0 A resolution. The activation loop and helix alphaC, key regulatory elements of kinase function, are disordered. The DFG motif of the inactive RSK1 adopts an "active-like" conformation. The beta-PO(4) group in the AMP-PCP complex adopts a unique conformation that may contribute to inactivity of the enzyme. Structures of RSK1 ligand complexes offer insights into the design of novel anticancer agents and into the regulation of the catalytic activity of RSKs.
- Published
- 2007
- Full Text
- View/download PDF
36. Optimization of a pyrazoloquinolinone class of Chk1 kinase inhibitors.
- Author
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Brnardic EJ, Garbaccio RM, Fraley ME, Tasber ES, Steen JT, Arrington KL, Dudkin VY, Hartman GD, Stirdivant SM, Drakas BA, Rickert K, Walsh ES, Hamilton K, Buser CA, Hardwick J, Tao W, Beck SC, Mao X, Lobell RB, Sepp-Lorenzino L, Yan Y, Ikuta M, Munshi SK, Kuo LC, and Kreatsoulas C
- Subjects
- Checkpoint Kinase 1, Crystallography, X-Ray, Models, Molecular, Protein Kinase Inhibitors chemistry, Quinolones chemistry, Structure-Activity Relationship, Protein Kinase Inhibitors pharmacology, Protein Kinases drug effects, Quinolones pharmacology
- Abstract
The development of 2,5-dihydro-4H-pyrazolo[4,3-c]quinolin-4-ones as inhibitors of Chk1 kinase is described. Introduction of a fused ring at the C7/C8 positions of the pyrazoloquinolinone provided an increase in potency while guidance from overlapping inhibitor bound Chk1 X-ray crystal structures contributed to the discovery of a potent and solubilizing propyl amine moiety in compound 52 (Chk1 IC(50)=3.1 nM).
- Published
- 2007
- Full Text
- View/download PDF
37. Strategies toward improving the brain penetration of macrocyclic tertiary carbinamine BACE-1 inhibitors.
- Author
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Moore KP, Zhu H, Rajapakse HA, McGaughey GB, Colussi D, Price EA, Sankaranarayanan S, Simon AJ, Pudvah NT, Hochman JH, Allison T, Munshi SK, Graham SL, Vacca JP, and Nantermet PG
- Subjects
- Crystallography, X-Ray, Models, Molecular, Amines pharmacokinetics, Amyloid Precursor Protein Secretases antagonists & inhibitors, Aspartic Acid Endopeptidases antagonists & inhibitors, Brain metabolism, Enzyme Inhibitors pharmacokinetics
- Abstract
This letter describes replacements for the P3 amide moiety present in previously reported tertiary carbinamine macrolactones. Although P-gp efflux issues associated with these amide-macrolactones were solved and full brain penetration was measured in one case, potency was compromised in the process.
- Published
- 2007
- Full Text
- View/download PDF
38. Design and synthesis of 2,3,5-substituted imidazolidin-4-one inhibitors of BACE-1.
- Author
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Barrow JC, Rittle KE, Ngo PL, Selnick HG, Graham SL, Pitzenberger SM, McGaughey GB, Colussi D, Lai MT, Huang Q, Tugusheva K, Espeseth AS, Simon AJ, Munshi SK, and Vacca JP
- Subjects
- Amyloid Precursor Protein Secretases chemistry, Aspartic Acid Endopeptidases chemistry, Binding Sites, Crystallography, X-Ray, Hydrogen Bonding, Imidazolidines chemistry, Mass Spectrometry, Models, Molecular, Protease Inhibitors chemistry, Amyloid Precursor Protein Secretases antagonists & inhibitors, Aspartic Acid Endopeptidases antagonists & inhibitors, Imidazolidines chemical synthesis, Imidazolidines pharmacology, Protease Inhibitors chemical synthesis, Protease Inhibitors pharmacology
- Published
- 2007
- Full Text
- View/download PDF
39. Discovery and SAR of isonicotinamide BACE-1 inhibitors that bind beta-secretase in a N-terminal 10s-loop down conformation.
- Author
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Stauffer SR, Stanton MG, Gregro AR, Steinbeiser MA, Shaffer JR, Nantermet PG, Barrow JC, Rittle KE, Collusi D, Espeseth AS, Lai MT, Pietrak BL, Holloway MK, McGaughey GB, Munshi SK, Hochman JH, Simon AJ, Selnick HG, Graham SL, and Vacca JP
- Subjects
- Animals, Baculoviridae drug effects, Baculoviridae enzymology, Biological Availability, Cells, Cultured, Magnetic Resonance Spectroscopy, Models, Molecular, Molecular Conformation, Molecular Weight, Niacinamide pharmacokinetics, Rats, Structure-Activity Relationship, Amyloid Precursor Protein Secretases antagonists & inhibitors, Aspartic Acid Endopeptidases antagonists & inhibitors, Enzyme Inhibitors chemical synthesis, Enzyme Inhibitors pharmacology, Niacinamide chemical synthesis, Niacinamide pharmacology
- Abstract
A series of low-molecular weight 2,6-diamino-isonicotinamide BACE-1 inhibitors containing an amine transition-state isostere were synthesized and shown to be highly potent in both enzymatic and cell-based assays. These inhibitors contain a trans-S,S-methyl cyclopropane P(3) which bind BACE-1 in a 10s-loop down conformation giving rise to highly potent compounds with favorable molecular weight and moderate to high susceptibility to P-glycoprotein (P-gp) efflux.
- Published
- 2007
- Full Text
- View/download PDF
40. Beta-secretase (BACE-1) inhibitors: accounting for 10s loop flexibility using rigid active sites.
- Author
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McGaughey GB, Colussi D, Graham SL, Lai MT, Munshi SK, Nantermet PG, Pietrak B, Rajapakse HA, Selnick HG, Stauffer SR, and Holloway MK
- Subjects
- Aspartic Acid analogs & derivatives, Aspartic Acid chemistry, Aspartic Acid pharmacology, Binding Sites, Catalysis, Chemical Phenomena, Chemistry, Physical, Crystallography, X-Ray, Enzyme Inhibitors chemistry, Ligands, Molecular Conformation, Structure-Activity Relationship, Thermodynamics, Amyloid Precursor Protein Secretases antagonists & inhibitors, Enzyme Inhibitors pharmacology
- Abstract
BACE-1 is a flexible enzyme with experimentally determined motion in the flap region, the catalytic aspartates, and the 10s loop. Four in-house crystallographically determined complexes of tertiary carbinamine inhibitors revealed 10s loop motion in the S(3) pocket. These X-ray structures were used to correlate K(i) values, which span over five orders of magnitude, with the calculated interaction energy, using the Merck Molecular Force Field for a series of 19 tertiary carbinamine inhibitors.
- Published
- 2007
- Full Text
- View/download PDF
41. Evaluating scoring functions for docking and designing beta-secretase inhibitors.
- Author
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Katharine Holloway M, McGaughey GB, Coburn CA, Stachel SJ, Jones KG, Stanton EL, Gregro AR, Lai MT, Crouthamel MC, Pietrak BL, and Munshi SK
- Subjects
- Crystallography, X-Ray, Kinetics, Models, Molecular, Molecular Conformation, Amyloid Precursor Protein Secretases antagonists & inhibitors, Aspartic Acid Endopeptidases antagonists & inhibitors, Enzyme Inhibitors chemical synthesis, Enzyme Inhibitors pharmacology
- Abstract
Several simple scoring methods were examined for 2 series of beta-secretase (BACE-1) inhibitors to identify a docking/scoring protocol which could be used to design BACE-1 inhibitors in a drug discovery program. Both the PLP1 score and MMFFs interaction energy (E(inter)) performed as well or better than more computationally intensive methods for a set of substrate-based inhibitors, while the latter performed well for both sets of inhibitors.
- Published
- 2007
- Full Text
- View/download PDF
42. 3-(Indol-2-yl)indazoles as Chek1 kinase inhibitors: Optimization of potency and selectivity via substitution at C6.
- Author
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Fraley ME, Steen JT, Brnardic EJ, Arrington KL, Spencer KL, Hanney BA, Kim Y, Hartman GD, Stirdivant SM, Drakas BA, Rickert K, Walsh ES, Hamilton K, Buser CA, Hardwick J, Tao W, Beck SC, Mao X, Lobell RB, Sepp-Lorenzino L, Yan Y, Ikuta M, Munshi SK, Kuo LC, and Kreatsoulas C
- Subjects
- Cell Cycle drug effects, Cell Line, Tumor, Checkpoint Kinase 1, Crystallography, X-Ray, Humans, Indazoles metabolism, Models, Molecular, Molecular Structure, Protein Kinase Inhibitors metabolism, Structure-Activity Relationship, Indazoles chemistry, Indazoles pharmacology, Protein Kinase Inhibitors chemistry, Protein Kinase Inhibitors pharmacology, Protein Kinases chemistry, Protein Kinases metabolism
- Abstract
The development of 3-(indol-2-yl)indazoles as inhibitors of Chek1 kinase is described. Introduction of amides and heteroaryl groups at the C6 position of the indazole ring system provided sufficient Chek1 potency and selectivity over Cdk7 to permit escape from DNA damage-induced arrest in a cellular assay. Enzyme potency against Chek1 was optimized by the incorporation of a hydroxymethyl triazole moiety in compound 21 (Chek1 IC(50)=0.30nM) that was shown by X-ray crystallography to displace one of three highly conserved water molecules in the HI region of the ATP-binding cleft.
- Published
- 2006
- Full Text
- View/download PDF
43. Conformationally biased P3 amide replacements of beta-secretase inhibitors.
- Author
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Stachel SJ, Coburn CA, Steele TG, Crouthamel MC, Pietrak BL, Lai MT, Holloway MK, Munshi SK, Graham SL, and Vacca JP
- Subjects
- Amides pharmacology, Amyloid Precursor Protein Secretases, Drug Design, Inhibitory Concentration 50, Models, Molecular, Phthalic Acids chemistry, Protease Inhibitors pharmacology, Structure-Activity Relationship, Amides chemistry, Endopeptidases metabolism, Protease Inhibitors chemical synthesis
- Abstract
We have synthesized and evaluated a series of conformationally biased P3 amide replacements based on an isophthalamide lead structure. The studies resulted in the identification of the beta-secretase inhibitor 7m which has an in vitro IC(50)=35 nM. The synthesis and biological activities of these compounds are described.
- Published
- 2006
- Full Text
- View/download PDF
44. Inclusion body myositis: an underdiagnosed myopathy of older people.
- Author
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Munshi SK, Thanvi B, Jonnalagadda SJ, Da Forno P, Patel A, and Sharma S
- Subjects
- Aged, 80 and over, Biopsy, Diagnosis, Differential, Disease Progression, Electromyography, Humans, Male, Muscle, Skeletal pathology, Polymyositis diagnosis, Myositis, Inclusion Body diagnosis
- Abstract
Inclusion body myositis (IBM), a condition characterised by progressive muscle weakness and inclusion bodies visible on muscle biopsy, is the most common type of myopathy in patients over 50 years of age. However, it is not only under diagnosed but frequently misdiagnosed as polymyositis and hence wrongly treated with steroids. In the evaluation of progressive weakness in older Caucasian males, IBM should be an important diagnostic consideration. Treatment-resistant 'polymyositis' in patients over 50 years of age is often IBM. If there is no histological confirmation, the diagnostic criteria allow for a category of 'possible IBM'. Sometimes, the diagnosis is missed because of the slow progression of the disease and a lack of suspicion on the part of physicians. The following case report and literature review will explore many of these issues.
- Published
- 2006
- Full Text
- View/download PDF
45. Biochemical and structural characterization of a novel class of inhibitors of the type 1 insulin-like growth factor and insulin receptor kinases.
- Author
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Bell IM, Stirdivant SM, Ahern J, Culberson JC, Darke PL, Dinsmore CJ, Drakas RA, Gallicchio SN, Graham SL, Heimbrook DC, Hall DL, Hua J, Kett NR, Kim AS, Kornienko M, Kuo LC, Munshi SK, Quigley AG, Reid JC, Trotter BW, Waxman LH, Williams TM, and Zartman CB
- Subjects
- Aldehydes metabolism, Amino Acid Sequence, Binding Sites, Borohydrides chemistry, Cell Line, Crystallography, X-Ray, Enzyme Activation, Humans, Molecular Sequence Data, Peptide Fragments antagonists & inhibitors, Peptide Fragments chemistry, Peptide Fragments metabolism, Phosphorylation, Protein Kinase Inhibitors metabolism, Protein Structure, Tertiary, Pyrroles metabolism, Receptor, Insulin metabolism, Schiff Bases chemistry, Structure-Activity Relationship, Aldehydes chemistry, Protein Kinase Inhibitors chemistry, Pyrroles chemistry, Receptor, IGF Type 1 antagonists & inhibitors, Receptor, Insulin antagonists & inhibitors, Receptor, Insulin chemistry
- Abstract
The type 1 insulin-like growth factor receptor (IGF-1R) is often overexpressed on tumor cells and is believed to play an important role in anchorage-independent proliferation. Additionally, cell culture studies have indicated that IGF-1R confers increased resistance to apoptosis caused by radiation or chemotherapeutic agents. Thus, inhibitors of the intracellular kinase domain of this receptor may have utility for the clinical treatment of cancer. As part of an effort to develop clinically useful inhibitors of IGF-1R kinase, a novel class of pyrrole-5-carboxaldehyde compounds was investigated. The compounds exhibited selectivity against the closely related insulin receptor kinase intrinsically and in cell-based assays. The inhibitors formed a reversible, covalent adduct at the kinase active site, and treatment of such adducts with sodium borohydride irreversibly inactivated the enzyme. Analysis of a tryptic digest of a covalently modified IGF-1R kinase fragment revealed that the active site Lys1003 had been reductively alkylated with the aldehyde inhibitor. Reductive alkylation of the insulin receptor kinase with one of these inhibitors led to a similarly inactivated enzyme which was examined by X-ray crystallography. The crystal structure confirmed the modification of the active site lysine side chain and revealed details of the key interactions between the inhibitor and enzyme.
- Published
- 2005
- Full Text
- View/download PDF
46. Carotid and vertebral artery dissection syndromes.
- Author
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Thanvi B, Munshi SK, Dawson SL, and Robinson TG
- Subjects
- Humans, Prognosis, Carotid Artery, Internal, Dissection diagnosis, Carotid Artery, Internal, Dissection etiology, Carotid Artery, Internal, Dissection therapy, Vertebral Artery Dissection diagnosis, Vertebral Artery Dissection etiology, Vertebral Artery Dissection therapy
- Abstract
Cervicocerebral arterial dissections (CAD) are an important cause of strokes in younger patients accounting for nearly 20% of strokes in patients under the age of 45 years. Extracranial internal carotid artery dissections comprise 70%-80% and extracranial vertebral dissections account for about 15% of all CAD. Aetiopathogenesis of CAD is incompletely understood, though trauma, respiratory infections, and underlying arteriopathy are considered important. A typical picture of local pain, headache, and ipsilateral Horner's syndrome followed after several hours by cerebral or retinal ischaemia is rare. Doppler ultrasound, MRI/MRA, and CT angiography are useful non-invasive diagnostic tests. The treatment of extracranial CAD is mainly medical using anticoagulants or antiplatelet agents although controlled studies to show their effectiveness are lacking. The prognosis of extracranial CAD is generally much better than that of the intracranial CAD. Recurrences are rare in CAD.
- Published
- 2005
- Full Text
- View/download PDF
47. Value of routine duodenal biopsy in diagnosing coeliac disease in patients with iron deficiency anaemia.
- Author
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Mandal AK, Mehdi I, Munshi SK, and Lo TC
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Biopsy methods, Celiac Disease complications, Female, Humans, Male, Middle Aged, Prospective Studies, Anemia, Iron-Deficiency etiology, Celiac Disease pathology, Duodenum pathology
- Abstract
Background: Iron deficiency anaemia (IDA) is a recognised feature of coeliac disease in adults and can be its only presentation., Objective: To determine the yield of routine distal duodenal biopsies in diagnosing coeliac disease in adult and elderly patients with IDA whose endoscopy revealed no upper gastrointestinal cause of iron deficiency., Study Design: Prospective study in a teaching hospital endoscopy unit., Method: Altogether 504 consecutive patients with IDA, aged 16-80 years, attending for endoscopy were included in this study. At least two distal duodenal biopsies were taken if endoscopy revealed no cause of iron deficiency., Result: In nine (1.8%) patients duodenal biopsies revealed typical histological features of coeliac disease. Of these, five patients were above 65 years old., Conclusion: In adult and elderly patients undergoing endoscopy for IDA, the endoscopist should take distal duodenal biopsies to exclude coeliac disease if no upper gastrointestinal cause of anaemia is found. Coeliac disease is not an uncommon cause of IDA in patients >65 years of age and a history of chronic diarrhoea increases diagnostic yield in this age group.
- Published
- 2004
- Full Text
- View/download PDF
48. Ageism in renal replacement therapy.
- Author
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Munshi SK, Bell SL, Vijayakumar N, and Warwick G
- Subjects
- Acute Kidney Injury epidemiology, Acute Kidney Injury etiology, Aged, Causality, Health Services Accessibility standards, Health Services Accessibility statistics & numerical data, Humans, Incidence, Karnofsky Performance Status, Renal Replacement Therapy standards, United Kingdom epidemiology, Acute Kidney Injury therapy, Patient Selection, Prejudice, Renal Replacement Therapy statistics & numerical data
- Published
- 2003
- Full Text
- View/download PDF
49. Acceptability of oesophagogastroduodenoscopy without intravenous sedation: patients' versus endoscopist's perception with special reference to older patients.
- Author
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Thanvi BR, Munshi SK, Vijayakumar N, Taub N, and Lo TC
- Subjects
- Adult, Age Factors, Aged, Aged, 80 and over, Conscious Sedation psychology, Endoscopy, Digestive System psychology, England, Female, Humans, Male, Middle Aged, Perception, Attitude of Health Personnel, Conscious Sedation methods, Endoscopy, Digestive System methods, Patient Satisfaction
- Abstract
Background: Unsedated oesophagogastroduodenoscopy (OGD) is considered by most endoscopists to be a quick, safe, and well tolerated procedure. Older patients are said to tolerate it better than younger patients. However, patients' perception of the discomfort for the unsedated OGD has not been well studied., Objective: This study was undertaken to compare (1) patients' perception of discomfort with the endoscopist's perception of patients' discomfort for the unsedated OGD, (2) tolerability between older (> or =75 years) and younger (<75 years) patients., Design and Subjects: A total of 130 consecutive patients attending a day case endoscopy unit were recruited for the study. The patients and endoscopist recorded their assessment using a visual analogue scale (VAS). The results were analysed using non-parametric tests. Thirty patients were excluded from the study based on exclusion criteria. Sixty three (57%) patients were aged > or =75 years and 37 (43%) were <75 years., Results: A significant difference was noted between patients' perception of the discomfort and the endoscopist's assessment of the patient's discomfort as suggested by the overall higher VAS scores for patients (median 4.9, SD 2.6) than those of the endoscopist (median 2.2, SD 1.2), giving a significant difference in median VAS score of 3.4 (p<0.001). Older and younger patients had similar scores, with median (SD) VAS scores of 4.8 (2.5) for > or =75 years and 4.9 (2.8) for <75 years. The endoscopist's median scores for these two groups were 2.2 (1.2) and 2.1 (1.3), respectively., Conclusions: Patients' discomfort during OGD performed without sedation was greatly underestimated by the endoscopist. There was no significant difference in acceptability between old and the young patients.
- Published
- 2003
- Full Text
- View/download PDF
50. Neuropsychiatric non-motor aspects of Parkinson's disease.
- Author
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Thanvi BR, Munshi SK, Vijaykumar N, and Lo TC
- Subjects
- Anxiety Disorders etiology, Anxiety Disorders therapy, Cognition Disorders etiology, Cognition Disorders therapy, Dementia etiology, Dementia therapy, Depressive Disorder etiology, Depressive Disorder therapy, Humans, Mental Disorders therapy, Parkinson Disease therapy, Psychotic Disorders etiology, Psychotic Disorders therapy, Mental Disorders etiology, Parkinson Disease psychology
- Abstract
Parkinson's disease is often recognised as a motor disease characterised by rest tremor, rigidity, bradykinesia, and postural disturbances. However, there are several non-motor aspects of the disease that are of at least equal importance in the management of patients with Parkinson's disease. They include depression, cognitive impairment, anxiety, and psychosis among others. It is important to recognise them, as they are common and they contribute significantly to patients' morbidity, quality of life, and institutionalisation to long term care homes. In addition to the disease duration and severity, other factors including drugs may contribute to their occurrence. Pathogenesis of these aspects is not fully understood, though there has been a significant increase in the knowledge in recent years. Management of these aspects involves a multidisciplinary approach.
- Published
- 2003
- Full Text
- View/download PDF
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