351 results on '"Peter B. Greer"'
Search Results
2. Cone beam computed tomography image guidance within a magnetic resonance imaging-only planning workflow
- Author
-
Laura M. O'Connor, Alesha Quinn, Samuel Denley, Lucy Leigh, Jarad Martin, Jason A Dowling, Kate Skehan, Helen Warren-Forward, and Peter B. Greer
- Subjects
Radiotherapy ,Image-guided radiation therapy ,MRI-only radiotherapy planning ,Cone Beam Computed Tomography ,MRI guided radiation therapy ,Magnetic resonance imaging ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background and purpose: Magnetic Resonance Imaging (MRI)-only planning workflows offer many advantages but raises challenges regarding image guidance. The study aimed to assess the viability of MRI to Cone Beam Computed Tomography (CBCT) based image guidance for MRI-only planning treatment workflows. Materials and methods: An MRI matching training package was developed. Ten radiation therapists, with a range of clinical image guidance experience and experience with MRI, completed the training package prior to matching assessment. The matching assessment was performed on four match regions: prostate gold seed, prostate soft tissue, rectum/anal canal and gynaecological. Each match region consisted of five patients, with three CBCTs per patient, resulting in fifteen CBCTs for each match region. The ten radiation therapists performed the CBCT image matching to CT and to MRI for all regions and recorded the match values. Results: The median inter-observer variation for MRI-CBCT matching and CT-CBCT matching for all regions were within 2 mm and 1 degree. There was no statistically significant association in the inter-observer variation in mean match values and radiation therapist image guidance experience levels. There was no statistically significant association in inter-observer variation in mean match values for MRI experience levels for prostate soft tissue and gynaecological match regions, while there was a statistically significant difference for prostate gold seed and rectum match regions. Conclusion: The results of this study support the concept that with focussed training, an MRI to CBCT image guidance approach can be successfully implemented in a clinical planning workflow.
- Published
- 2023
- Full Text
- View/download PDF
3. Assessing the impact of magnetic resonance treatment simulation (MRSIM) on target volume delineation and dose to organs at risk for oropharyngeal radiotherapy
- Author
-
Haylea Richardson, Mahesh Kumar, Minh Thi Tieu, Joel Parker, Jason A. Dowling, Jameen Arm, Leah Best, Peter B. Greer, Matthew Clapham, Christopher Oldmeadow, Laura O’Connor, and Chris Wratten
- Subjects
radiation therapy planning ,oropharynx ,MRI ,target volumes ,delineation ,organs at risk dose ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Abstract Introduction Assessing the use of a radiation therapy (RT) planning MRI performed in the treatment position (pMRI) on target volume delineation and effect on organ at risk dose for oropharyngeal cancer patients planned with diagnostic MRI (dMRI) and CT scan. Methods Diagnostic MRI scans were acquired for 26 patients in a neutral patient position using a 3T scanner (dMRI). Subsequent pMRI scans were acquired on the same scanner with a flat couch top and the patient in their immobilisation mask. Each series was rigidly registered to the patients planning CT scan and volumes were first completed with the CT/dMRI. The pMRI was then made available for volume modification. For the group with revised volumes, two IMRT plans were developed to demonstrate the impact of the modification. Image and registration quality was also evaluated. Results The pMRI registration led to the modification of target volumes for 19 of 26 participants. The pMRI target volumes were larger in absolute volume resulting in reduced capacity for organ sparing. Predominantly, modifications occurred for the primary gross tumour volume (GTVp) with a mean Dice Similarity Coefficient (DSC) of 0.7 and the resulting high risk planning target volume, a mean DSC of 0.89. Both MRIs scored similarly for image quality, with the pMRI demonstrating improved registration quality and efficiency. Conclusions A pMRI provides improvement in registration efficiency, quality and a higher degree of oncologist confidence in target delineation. These results have led to a practice change within our department, where a pMRI is acquired for all eligible oropharyngeal cancer patients.
- Published
- 2022
- Full Text
- View/download PDF
4. Validation of an MRI-only planning workflow for definitive pelvic radiotherapy
- Author
-
Laura M. O’Connor, Jason A. Dowling, Jae Hyuk Choi, Jarad Martin, Helen Warren-Forward, Haylea Richardson, Leah Best, Kate Skehan, Mahesh Kumar, Geetha Govindarajulu, Swetha Sridharan, and Peter B. Greer
- Subjects
MRI radiotherapy planning ,Radiotherapy ,Rectum neoplasms ,Cervix neoplasms ,Endometrium neoplasms ,Anal canal neoplasms ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Purpose Previous work on Magnetic Resonance Imaging (MRI) only planning has been applied to limited treatment regions with a focus on male anatomy. This research aimed to validate the use of a hybrid multi-atlas synthetic computed tomography (sCT) generation technique from a MRI, using a female and male atlas, for MRI only radiation therapy treatment planning of rectum, anal canal, cervix and endometrial malignancies. Patients and methods Forty patients receiving radiation treatment for a range of pelvic malignancies, were separated into male (n = 20) and female (n = 20) cohorts for the creation of gender specific atlases. A multi-atlas local weighted voting method was used to generate a sCT from a T1-weighted VIBE DIXON MRI sequence. The original treatment plans were copied from the CT scan to the corresponding sCT for dosimetric validation. Results The median percentage dose difference between the treatment plan on the CT and sCT at the ICRU reference point for the male cohort was − 0.4% (IQR of 0 to − 0.6), and − 0.3% (IQR of 0 to − 0.6) for the female cohort. The mean gamma agreement for both cohorts was > 99% for criteria of 3%/2 mm and 2%/2 mm. With dose criteria of 1%/1 mm, the pass rate was higher for the male cohort at 96.3% than the female cohort at 93.4%. MRI to sCT anatomical agreement for bone and body delineated contours was assessed, with a resulting Dice score of 0.91 ± 0.2 (mean ± 1 SD) and 0.97 ± 0.0 for the male cohort respectively; and 0.96 ± 0.0 and 0.98 ± 0.0 for the female cohort respectively. The mean absolute error in Hounsfield units (HUs) within the entire body for the male and female cohorts was 59.1 HU ± 7.2 HU and 53.3 HU ± 8.9 HU respectively. Conclusions A multi-atlas based method for sCT generation can be applied to a standard T1-weighted MRI sequence for male and female pelvic patients. The implications of this study support MRI only planning being applied more broadly for both male and female pelvic sites. Trial registration This trial was registered in the Australian New Zealand Clinical Trials Registry (ANZCTR) ( www.anzctr.org.au ) on 04/10/2017. Trial identifier ACTRN12617001406392.
- Published
- 2022
- Full Text
- View/download PDF
5. Quality assurance for MRI-only radiation therapy: A voxel-wise population-based methodology for image and dose assessment of synthetic CT generation methods
- Author
-
Hilda Chourak, Anaïs Barateau, Safaa Tahri, Capucine Cadin, Caroline Lafond, Jean-Claude Nunes, Adrien Boue-Rafle, Mathias Perazzi, Peter B. Greer, Jason Dowling, Renaud de Crevoisier, and Oscar Acosta
- Subjects
quality assurance ,voxel-wise analysis ,population-based evaluation ,synthetic CT assessment ,dosimetric assessment ,MRI-only radiation therapy ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
The quality assurance of synthetic CT (sCT) is crucial for safe clinical transfer to an MRI-only radiotherapy planning workflow. The aim of this work is to propose a population-based process assessing local errors in the generation of sCTs and their impact on dose distribution. For the analysis to be anatomically meaningful, a customized interpatient registration method brought the population data to the same coordinate system. Then, the voxel-based process was applied on two sCT generation methods: a bulk-density method and a generative adversarial network. The CT and MRI pairs of 39 patients treated by radiotherapy for prostate cancer were used for sCT generation, and 26 of them with delineated structures were selected for analysis. Voxel-wise errors in sCT compared to CT were assessed for image intensities and dose calculation, and a population-based statistical test was applied to identify the regions where discrepancies were significant. The cumulative histograms of the mean absolute dose error per volume of tissue were computed to give a quantitative indication of the error for each generation method. Accurate interpatient registration was achieved, with mean Dice scores higher than 0.91 for all organs. The proposed method produces three-dimensional maps that precisely show the location of the major discrepancies for both sCT generation methods, highlighting the heterogeneity of image and dose errors for sCT generation methods from MRI across the pelvic anatomy. Hence, this method provides additional information that will assist with both sCT development and quality control for MRI-based planning radiotherapy.
- Published
- 2022
- Full Text
- View/download PDF
6. Diagnosis of transition zone prostate cancer by multiparametric MRI: added value of MR spectroscopic imaging with sLASER volume selection
- Author
-
Neda Gholizadeh, Peter B. Greer, John Simpson, Jonathan Goodwin, Caixia Fu, Peter Lau, Saabir Siddique, Arend Heerschap, and Saadallah Ramadan
- Subjects
Prostate cancer ,Multiparametric MRI ,1H MR spectroscopic imaging ,GOIA-sLASER ,SVM ,Medicine - Abstract
Abstract Background Current multiparametric MRI (mp-MRI) in routine clinical practice has poor-to-moderate diagnostic performance for transition zone prostate cancer. The aim of this study was to evaluate the potential diagnostic performance of novel 1H magnetic resonance spectroscopic imaging (MRSI) using a semi-localized adiabatic selective refocusing (sLASER) sequence with gradient offset independent adiabaticity (GOIA) pulses in addition to the routine mp-MRI, including T2-weighted imaging (T2WI), diffusion-weighted imaging (DWI) and quantitative dynamic contrast enhancement (DCE) for transition zone prostate cancer detection, localization and grading. Methods Forty-one transition zone prostate cancer patients underwent mp-MRI with an external phased-array coil. Normal and cancer regions were delineated by two radiologists and divided into low-risk, intermediate-risk, and high-risk categories based on TRUS guided biopsy results. Support vector machine models were built using different clinically applicable combinations of T2WI, DWI, DCE, and MRSI. The diagnostic performance of each model in cancer detection was evaluated using the area under curve (AUC) of the receiver operating characteristic diagram. Then accuracy, sensitivity and specificity of each model were calculated. Furthermore, the correlation of mp-MRI parameters with low-risk, intermediate-risk and high-risk cancers were calculated using the Spearman correlation coefficient. Results The addition of MRSI to T2WI + DWI and T2WI + DWI + DCE improved the accuracy, sensitivity and specificity for cancer detection. The best performance was achieved with T2WI + DWI + MRSI where the addition of MRSI improved the AUC, accuracy, sensitivity and specificity from 0.86 to 0.99, 0.83 to 0.96, 0.80 to 0.95, and 0.85 to 0.97 respectively. The (choline + spermine + creatine)/citrate ratio of MRSI showed the highest correlation with cancer risk groups (r = 0.64, p
- Published
- 2021
- Full Text
- View/download PDF
7. Comparison of Synthetic Computed Tomography Generation Methods, Incorporating Male and Female Anatomical Differences, for Magnetic Resonance Imaging-Only Definitive Pelvic Radiotherapy
- Author
-
Laura M. O’Connor, Jae H. Choi, Jason A. Dowling, Helen Warren-Forward, Jarad Martin, and Peter B. Greer
- Subjects
MRI radiotherapy planning ,image-guided radiotherapy ,synthetic CT ,computer-assisted radiotherapy planning ,rectum neoplasms ,cervix neoplasms ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
PurposeThere are several means of synthetic computed tomography (sCT) generation for magnetic resonance imaging (MRI)-only planning; however, much of the research omits large pelvic treatment regions and female anatomical specific methods. This research aimed to apply four of the most popular methods of sCT creation to facilitate MRI-only radiotherapy treatment planning for male and female anorectal and gynecological neoplasms. sCT methods were validated against conventional computed tomography (CT), with regard to Hounsfield unit (HU) estimation and plan dosimetry.Methods and MaterialsPaired MRI and CT scans of 40 patients were used for sCT generation and validation. Bulk density assignment, tissue class density assignment, hybrid atlas, and deep learning sCT generation methods were applied to all 40 patients. Dosimetric accuracy was assessed by dose difference at reference point, dose volume histogram (DVH) parameters, and 3D gamma dose comparison. HU estimation was assessed by mean error and mean absolute error in HU value between each sCT and CT.ResultsThe median percentage dose difference between the CT and sCT was
- Published
- 2022
- Full Text
- View/download PDF
8. Increased Dose to Organs in Urinary Tract Associates With Measures of Genitourinary Toxicity in Pooled Voxel-Based Analysis of 3 Randomized Phase III Trials
- Author
-
Marco Marcello, James W. Denham, Angel Kennedy, Annette Haworth, Allison Steigler, Peter B. Greer, Lois C. Holloway, Jason A. Dowling, Michael G. Jameson, Dale Roach, David J. Joseph, Sarah L. Gulliford, David P. Dearnaley, Matthew R. Sydes, Emma Hall, and Martin A. Ebert
- Subjects
external beam radiotherapy ,prostate cancer ,urinary toxicity ,voxel-based analysis ,dose-toxicity relationships ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Purpose: Dose information from organ sub-regions has been shown to be more predictive of genitourinary toxicity than whole organ dose volume histogram information. This study aimed to identify anatomically-localized regions where 3D dose is associated with genitourinary toxicities in healthy tissues throughout the pelvic anatomy.Methods and Materials: Dose distributions for up to 656 patients of the Trans-Tasman Radiation Oncology Group 03.04 RADAR trial were deformably registered onto a single exemplar CT dataset. Voxel- based multiple comparison permutation dose difference testing, Cox regression modeling and LASSO feature selection were used to identify regions where 3D dose-increase was associated with late grade ≥ 2 genitourinary dysuria, incontinence and frequency, and late grade ≥ 1 haematuria. This was externally validated by registering dose distributions from the RT01 (up to n = 388) and CHHiP (up to n = 247) trials onto the same exemplar and repeating the voxel-based tests on each of these data sets. All three datasets were then combined, and the tests repeated.Results: Voxel-based Cox regression and multiple comparison permutation dose difference testing revealed regions where increased dose was correlated with genitourinary toxicity. Increased dose in the vicinity of the membranous and spongy urethra was associated with dysuria for all datasets. Haematuria was similarly correlated with increased dose at the membranous and spongy urethra, for the RADAR, CHHiP, and combined datasets. Some evidence was found for the association between incontinence and increased dose at the internal and external urethral sphincter for RADAR and the internal sphincter alone for the combined dataset. Incontinence was also strongly correlated with dose from posterior oblique beams. Patients with fields extending inferiorly and posteriorly to the CTV, adjacent to the membranous and spongy urethra, were found to experience increased frequency.Conclusions: Anatomically-localized dose-toxicity relationships were determined for late genitourinary symptoms in the urethra and urinary sphincters. Low-intermediate doses to the extraprostatic urethra were associated with risk of late dysuria and haematuria, while dose to the urinary sphincters was associated with incontinence.
- Published
- 2020
- Full Text
- View/download PDF
9. A remote EPID-based dosimetric TPS-planned audit of centers for clinical trials: outcomes and analysis of contributing factors
- Author
-
Narges Miri, Kimberley Legge, Kim Colyvas, Joerg Lehmann, Philip Vial, Alisha Moore, Monica Harris, and Peter B. Greer
- Subjects
Auditing ,Dosimetry ,Electronic portal imaging device ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background A novel remote method for external dosimetric TPS-planned auditing of intensity modulated radiotherapy (IMRT) and volumetric modulated arc therapy (VMAT) for clinical trials using electronic portal imaging device (EPID) has been developed. The audit has been applied to multiple centers across Australia and New Zealand. This work aims to assess the audit outcomes and explores the variables that contributed to the audit results. Methods Thirty audits were performed of 21 radiotherapy facilities, 17 facilities underwent IMRT audits and 13 underwent VMAT audits. The assessment was based on comparisons between the delivered doses derived from images acquired with EPIDs and planned doses from the local treatment planning systems (TPS). Gamma pass-rate (GPR) and gamma mean value (GMV) were calculated for each IMRT field and VMAT arc (total 268 comparisons). A multiple variable linear model was applied to the GMV results (3%/3 mm criteria) to assess the influence and significance of explanatory variables. The explanatory variables were Linac-TPS combination, TPS grid resolution, IMRT/VMAT delivery, age of EPID, treatment site, record and verification system (R&V) type and dose-rate. Finally, the audit results were compared with other recent audits by calculating the incidence ratio (IR) as a ratio of the observed mean/median GPRs for the remote audit to the other audits. Results The average (± 1 SD) of the centers’ GPRs were: 99.3 ± 1.9%, 98.6 ± 2.7% & 96.2 ± 5.5% at 3%, 3 mm, 3%, 2 mm and 2%, 2 mm criteria respectively. The most determinative variables on the GMVs were Linac-TPS combination, TPS grid resolution and IMRT/VMAT delivery type. The IR values were 1 for seven comparisons, indicating similar GPRs of the remote audit with the reference audits and > 1 for four comparisons, indicating higher GPRs of the remote audit than the reference audits. Conclusion The remote dosimetry audit method for clinical trials demonstrated high GPRs and provided results comparable to established more resource-intensive audit methods. Several factors were found to influence the results including some effect of Linac-TPS combination.
- Published
- 2018
- Full Text
- View/download PDF
10. Remote dosimetric auditing for intensity modulated radiotherapy: A pilot study
- Author
-
Narges Miri, Joerg Lehmann, Kimberley Legge, Benjamin J. Zwan, Philip Vial, and Peter B. Greer
- Subjects
Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background and Purpose: Electronic portal imaging devices (EPIDs) can be used to reconstruct dose inside a virtual phantom. This work aims to study the feasibility of using this method for remote dosimetry auditing of clinical trials. Materials and Methods: Six centres participated in an intensity modulated radiotherapy (IMRT) pilot study of this new audit approach. Each centre produced a head and neck (HN) and post-prostatectomy (PP) trial plan and transferred the plans to virtual phantoms to calculate a reference dose distribution. They acquired in-air images of the treatment fields along with calibration images using their EPID. These data were sent to the central site where the images were converted to 2D field-by-field doses in a flat virtual water phantom and to 3D combined field doses in a cylindrical virtual phantom for comparison with corresponding reference dose distributions. Additional test images were used to assess the accuracy of the method when using different EPIDs. Results: Field-by-field 2D analysis yielded mean gamma pass-rates of 99.6% (±0.3%) and 99.6% (±0.6%) for HN and PP plans respectively (3%/3 mm, doses greater than 10% global max). 3D combined field analysis gave mean pass-rates of 97.9% (±2.6%) and 97.9% (±1.8%) for the HN and PP plans. Dosimetry tests revealed some field size limitations of the EPIDs. Conclusions: The remote auditing methodology using EPIDs is feasible and potentially an inexpensive method.
- Published
- 2017
- Full Text
- View/download PDF
11. Audiovisual biofeedback guided breath-hold improves lung tumor position reproducibility and volume consistency
- Author
-
Danny Lee, PhD, Peter B. Greer, PhD, Carminia Lapuz, MBBS, FRANZCR, Joanna Ludbrook, FRANZCR, Perry Hunter, BSc, Jameen Arm, MSc, Sean Pollock, MSc, Kuldeep Makhija, PGDCA, Ricky T. O'Brien, PhD, Taeho Kim, PhD, and Paul Keall, PhD
- Subjects
Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Purpose: Respiratory variation can increase the variability of tumor position and volume, accounting for larger treatment margins and longer treatment times. Audiovisual biofeedback as a breath-hold technique could be used to improve the reproducibility of lung tumor positions at inhalation and exhalation for the radiation therapy of mobile lung tumors. This study aimed to assess the impact of audiovisual biofeedback breath-hold (AVBH) on interfraction lung tumor position reproducibility and volume consistency for respiratory-gated lung cancer radiation therapy. Methods: Lung tumor position and volume were investigated in 9 patients with lung cancer who underwent a breath-hold training session with AVBH before 2 magnetic resonance imaging (MRI) sessions. During the first MRI session (before treatment), inhalation and exhalation breath-hold 3-dimensional MRI scans with conventional breath-hold (CBH) using audio instructions alone and AVBH were acquired. The second MRI session (midtreatment) was repeated within 6 weeks after the first session. Gross tumor volumes (GTVs) were contoured on each dataset. CBH and AVBH were compared in terms of tumor position reproducibility as assessed by GTV centroid position and position range (defined as the distance of GTV centroid position between inhalation and exhalation) and tumor volume consistency as assessed by GTV between inhalation and exhalation. Results: Compared with CBH, AVBH improved the reproducibility of interfraction GTV centroid position by 46% (P = .009) from 8.8 mm to 4.8 mm and GTV position range by 69% (P = .052) from 7.4 mm to 2.3 mm. Compared with CBH, AVBH also improved the consistency of intrafraction GTVs by 70% (P = .023) from 7.8 cm3 to 2.5 cm3. Conclusions: This study demonstrated that audiovisual biofeedback can be used to improve the reproducibility and consistency of breath-hold lung tumor position and volume, respectively. These results may provide a pathway to achieve more accurate lung cancer radiation treatment in addition to improving various medical imaging and treatments by using breath-hold procedures.
- Published
- 2017
- Full Text
- View/download PDF
12. Bulk Anatomical Density Based Dose Calculation for Patient-Specific Quality Assurance of MRI-Only Prostate Radiotherapy
- Author
-
Jae Hyuk Choi, Danny Lee, Laura O'Connor, Stephan Chalup, James S. Welsh, Jason Dowling, and Peter B. Greer
- Subjects
MRI-only planning ,synthetic CT ,bulk density ,anatomical structure ,quality assurance ,dosimetric verification ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Prostate cancer treatment planning can be performed using magnetic resonance imaging (MRI) only with sCT scans. However, sCT scans are computer generated from MRI data and therefore robust, efficient, and accurate patient-specific quality assurance methods for dosimetric verification are required. Bulk anatomical density (BAD) maps can be generated based on anatomical contours derived from the MRI image. This study investigates and optimizes the BAD map approach for sCT quality assurance with a large patient CT and MRI dataset. 3D T2-weighted MRI and full density CT images of 54 patients were used to create BAD maps with different tissue class combinations. Mean Hounsfield units (HU) of Fat (F: below −30 HU), the entire Tissue [T: excluding bone (B)], and Muscle (M: excluding bone and fat) were derived from the CT scans. CT based BAD maps (BADBT,CT and BADBMF,CT) and a conventional bone and water bulk-density method (BADBW,CT) were compared to full CT calculations with bone assignments to 366 HU (measured) and 288 HU (obtained from literature). Optimal bulk densities of Tissue for BADBT,CT and Bone for BADBMF,CT were derived to provide zero mean isocenter dose agreement to the CT plan. Using the optimal densities, the dose agreement of BADBT,CT and BADBMF,CT to CT was redetermined. These maps were then created for the MRI dataset using auto-generated contours and dose calculations compared to CT. The average mean density of Bone, Fat, Muscle, and Tissue were 365.5 ± 62.2, −109.5 ± 12.9, 23.3 ± 9.7, and −46.3 ± 15.2 HU, respectively. Comparing to other bulk-density maps, BADBMF,CT maps provided the closest dose to CT. Calculated optimal mean densities of Tissue and Bone were −32.7 and 323.7 HU, respectively. The isocenter dose agreement of the optimal density assigned BADBT,CT and BADBMF,CT to full density CT were 0.10 ± 0.65% and 0.01 ± 0.45%, respectively. The isocenter dose agreement of MRI generated BADBT,MR and BADBMF,MR to full density CT were −0.15 ± 0.90% and −0.16 ± 0.65%, respectively. The BAD method with optimal bulk densities can provide robust, accurate and efficient patient-specific quality assurance for dose calculations in MRI-only radiotherapy.
- Published
- 2019
- Full Text
- View/download PDF
13. Manipulating Medical Image Translation with Manifold Disentanglement.
- Author
-
Siyu Liu 0002, Jason A. Dowling, Craig Engstrom, Peter B. Greer, Stuart Crozier, and Shekhar S. Chandra
- Published
- 2023
- Full Text
- View/download PDF
14. Voxel-Wise Analysis for Spatial Characterisation of Pseudo-CT Errors in MRI-Only Radiotherapy Planning.
- Author
-
Hilda Chourak, Anaïs Barateau, Eugenia Mylona, Capucine Cadin, Caroline Lafond, Peter B. Greer, Jason Dowling, Jean-Claude Nunes, Renaud de Crevoisier, and Oscar Acosta
- Published
- 2021
- Full Text
- View/download PDF
15. Pseudo-CT Generation for Mri-only Radiotherapy: Comparative Study Between A Generative Adversarial Network, A U-Net Network, A Patch-Based, and an Atlas Based Methods.
- Author
-
Axel Largent, Jean-Claude Nunes, Hervé Saint-Jalmes, John S. H. Baxter, Peter B. Greer, Jason Dowling, Renaud de Crevoisier, and Oscar Acosta
- Published
- 2019
- Full Text
- View/download PDF
16. CAN3D: Fast 3D Medical Image Segmentation via Compact Context Aggregation.
- Author
-
Wei Dai, Boyeong Woo, Siyu Liu 0002, Matthew Marques, Craig B. Engstrom, Peter B. Greer, Stuart Crozier, Jason A. Dowling, and Shekhar S. Chandra
- Published
- 2021
17. Pseudo-CT generation by conditional inference random forest for MRI-based radiotherapy treatment planning.
- Author
-
Axel Largent, Jean-Claude Nunes, Hervé Saint-Jalmes, Antoine Simon, Nicolas Perichon, Anais Barateau, Chloe Herve, Caroline Lafond, Peter B. Greer, Jason A. Dowling, Renaud de Crevoisier, and Oscar Acosta
- Published
- 2017
- Full Text
- View/download PDF
18. Fabric Image Representation Encoding Networks for Large-scale 3D Medical Image Analysis.
- Author
-
Siyu Liu 0002, Wei Dai, Craig Engstrom, Jurgen Fripp, Peter B. Greer, Stuart Crozier, Jason A. Dowling, and Shekhar S. Chandra
- Published
- 2020
19. Manipulating Medical Image Translation with Manifold Disentanglement.
- Author
-
Siyu Liu 0002, Jason A. Dowling, Craig Engstrom, Peter B. Greer, Stuart Crozier, and Shekhar S. Chandra
- Published
- 2020
20. CAN3D: Fast 3D medical image segmentation via compact context aggregation.
- Author
-
Wei Dai, Boyeong Woo, Siyu Liu 0002, Matthew Marques, Craig Engstrom, Peter B. Greer, Stuart Crozier, Jason A. Dowling, and Shekhar S. Chandra
- Published
- 2022
- Full Text
- View/download PDF
21. Clinical validation of the Varian Truebeam intra-fraction motion review (IMR) system for prostate treatment guidance
- Author
-
Guneet Kaur, Joerg Lehmann, Peter B. Greer, Jarad Martin, and John Simpson
- Subjects
Radiological and Ultrasound Technology ,Biomedical Engineering ,Biophysics ,Radiology, Nuclear Medicine and imaging ,Instrumentation ,Biotechnology - Abstract
This study quantified the performance of Intra-fraction Motion Review (IMR) during prostate Stereotactic Body Radiotherapy (SBRT) treatments. IMR was evaluated using prostate motion data from patients treated in an SBRT clinical trial (PROMETHEUS, NCT00587990).IMR measured prostate displacements were compared to those of two 3D motion management methods: Kilovoltage Intra-fraction Motion management (KIM) and MV/kV triangulation. A planning study assessing the impact of a defined prostate motion (2-5 mm) on the PTV coverage with and without IMR was performed. A clinically relevant IMR search region for prostate cancer SBRT treatments was determined using a customised anthropomorphic pelvis phantom with implanted gold seeds and a motion platform. IMR showed submillimeter agreement with corresponding 2D projections from both KIM and MV/kV triangulation. However, IMR detected actual displacements consistently in considerably fewer frames than KIM (3D), with the actual numbers depending on the settings. The Default Search Region (DSR) method employing a circular search region proved superior to user-contoured structures in detecting clinically relevant prostate motion. Reducing the DSR search region radius can reduce the impact of the 2D nature of IMR and improve the detectability of actual motion (by 10% per 0.5 mm reduction) but must be balanced against increased beam interruptions from minor, clinically irrelevant motion. The use of IMR for SBRT prostate treatments has the potential to improve target dose coverage (minimum dose to 98% of the PTV, D98%) by 20% compared to treatment without IMR. Calculated D98% of IMR monitored treatments with motion was within 1.5% of plans without motion.
- Published
- 2022
- Full Text
- View/download PDF
22. The dosimetric error due to uncorrected tumor rotation during real‐time adaptive prostate stereotactic body radiation therapy
- Author
-
Chandrima Sengupta, Simon Skouboe, Thomas Ravkilde, Per Rugaard Poulsen, Doan Trang Nguyen, Peter B. Greer, Trevor Moodie, Nicholas Hardcastle, Amy J. Hayden, Sandra Turner, Shankar Siva, Keen‐Hun Tai, Jarad Martin, Jeremy T. Booth, Ricky O'Brien, and Paul J. Keall
- Subjects
motion management ,motion-induced dose error ,tumor motion ,General Medicine - Abstract
Background: During prostate stereotactic body radiation therapy (SBRT), prostate tumor translational motion may deteriorate the planned dose distribution. Most of the major advances in motion management to date have focused on correcting this one aspect of the tumor motion, translation. However, large prostate rotation up to 30° has been measured. As the technological innovation evolves toward delivering increasingly precise radiotherapy, it is important to quantify the clinical benefit of translational and rotational motion correction over translational motion correction alone. Purpose: The purpose of this work was to quantify the dosimetric impact of intrafractional dynamic rotation of the prostate measured with a six degrees-of-freedom tumor motion monitoring technology. Methods: The delivered dose was reconstructed including (a) translational and rotational motion and (b) only translational motion of the tumor for 32 prostate cancer patients recruited on a 5-fraction prostate SBRT clinical trial. Patients on the trial received 7.25 Gy in a treatment fraction. A 5 mm clinical target volume (CTV) to planning target volume (PTV) margin was applied in all directions except the posterior direction where a 3 mm expansion was used. Prostate intrafractional translational motion was managed using a gating strategy, and any translation above the gating threshold was corrected by applying an equivalent couch shift. The residual translational motion is denoted as (Formula presented.). Prostate intrafractional rotational motion (Formula presented.) was recorded but not corrected. The dose differences from the planned dose due to (Formula presented.) + (Formula presented.), ΔD((Formula presented.) + (Formula presented.)) and due to (Formula presented.) alone, ΔD((Formula presented.)), were then determined for CTV D98, PTV D95, bladder V6Gy, and rectum V6Gy. The residual dose error due to uncorrected rotation, (Formula presented.) was then quantified: (Formula presented.) = ΔD((Formula presented.) + (Formula presented.)) - ΔD((Formula presented.)). Results: Fractional data analysis shows that the dose differences from the plan (both ΔD((Formula presented.) + (Formula presented.)) and ΔD((Formula presented.))) for CTV D98 was less than 5% in all treatment fractions. ΔD((Formula presented.) + (Formula presented.)) was larger than 5% in one fraction for PTV D95, in one fraction for bladder V6Gy, and in five fractions for rectum V6Gy. Uncorrected rotation, (Formula presented.) induced residual dose error, (Formula presented.), resulted in less dose to CTV and PTV in 43% and 59% treatment fractions, respectively, and more dose to bladder and rectum in 51% and 53% treatment fractions, respectively. The cumulative dose over five fractions, ∑D((Formula presented.) + (Formula presented.)) and ∑D((Formula presented.)), was always within 5% of the planned dose for all four structures for every patient. Conclusions: The dosimetric impact of tumor rotation on a large prostate cancer patient cohort was quantified in this study. These results suggest that the standard 3–5 mm CTV-PTV margin was sufficient to account for the intrafraction prostate rotation observed for this cohort of patients, provided an appropriate gating threshold was applied to correct for translational motion. Residual dose errors due to uncorrected prostate rotation were small in magnitude, which may be corrected using different treatment adaptation strategies to further improve the dosimetric accuracy.
- Published
- 2022
- Full Text
- View/download PDF
23. Fast Multiatlas Selection Using Composition of Transformations for Radiation Therapy Planning.
- Author
-
David Rivest-Hénault, Soumya Ghose, Josien P. W. Pluim, Peter B. Greer, Jurgen Fripp, and Jason A. Dowling
- Published
- 2014
- Full Text
- View/download PDF
24. SEAFARER – A new concept for validating radiotherapy patient specific QA for clinical trials and clinical practice
- Author
-
Joerg Lehmann, Mohammad Hussein, Miriam A. Barry, Shankar Siva, Alisha Moore, Michael Chu, Patricia Díez, David J. Eaton, Jeffrey Harwood, Peta Lonski, Elizabeth Claridge Mackonis, Carole Meehan, Rushil Patel, Xenia Ray, Maddison Shaw, Justin Shepherd, Gregory Smyth, Therese S. Standen, Brindha Subramanian, Peter B. Greer, and Catharine H. Clark
- Subjects
Clinical Trials as Topic ,Quality Assurance, Health Care ,Oncology ,Radiotherapy Planning, Computer-Assisted ,Humans ,Radiotherapy Dosage ,Radiology, Nuclear Medicine and imaging ,Radiotherapy, Intensity-Modulated ,Hematology ,Radiometry - Abstract
The quality of radiotherapy delivery has been shown to significantly impact clinical outcomes including patient survival. To identify errors, institutions perform Patient Specific Quality Assurance (PSQA) assessing each individual radiotherapy plan prior to starting patient treatments. Externally administered Dosimetry Audits have found problems despite institutions passing their own PSQA. Hence a new audit concept which assesses the institution's ability to detect errors with their routine PSQA is needed.Purposefully introduced edits which simulated treatment delivery errors were embedded into radiation treatment plans of participating institutions. These were designed to produce clinically significant changes yet were mostly within treatment delivery specifications. Actual impact was centrally assessed for each plan. Institutions performed PSQA on each plan, without knowing which contained errors.Seventeen institutions using six radiation treatment planning systems and two delivery systems performed PSQA on twelve plans each. Seventeen erroneous plans (across seven institutions) passed PSQA despite causing5% increase in spinal cord dose relative to the original plans. Six plans (from four institutions) passed despite a10% increase.This novel audit concept evolves beyond testing an institution's ability to deliver a single test case, to increasing the number of errors caught by institutions themselves, thus increasing quality of radiation therapy and impacting every patient treated. Administered remotely this audit also provides advantages in cost, environmental impact, and logistics.
- Published
- 2022
- Full Text
- View/download PDF
25. A review of segmentation and deformable registration methods applied to adaptive cervical cancer radiation therapy treatment planning.
- Author
-
Soumya Ghose, Lois Holloway, Karen Lim, Philip Chan 0003, Jacqueline Veera, Shalini K. Vinod, Gary Liney, Peter B. Greer, and Jason Dowling
- Published
- 2015
- Full Text
- View/download PDF
26. Robust inverse-consistent affine CT-MR registration in MRI-assisted and MRI-alone prostate radiation therapy.
- Author
-
David Rivest-Hénault, Nicholas D. H. Dowson, Peter B. Greer, Jurgen Fripp, and Jason A. Dowling
- Published
- 2015
- Full Text
- View/download PDF
27. Structure-Guided Nonrigid Registration of CT-MR Pelvis Scans with Large Deformations in MR-Based Image Guided Radiation Therapy.
- Author
-
David Rivest-Hénault, Peter B. Greer, Jurgen Fripp, and Jason Dowling
- Published
- 2013
- Full Text
- View/download PDF
28. A Survey of Cervix Segmentation Methods in Magnetic Resonance Images.
- Author
-
Soumya Ghose, Lois Holloway, Karen Lim, Philip Chan 0003, Jacqueline Veera, Shalini K. Vinod, Gary Liney, Peter B. Greer, and Jason Dowling
- Published
- 2013
- Full Text
- View/download PDF
29. Optimisation and validation of an integrated magnetic resonance imaging-only radiotherapy planning solution
- Author
-
Jae H. Choi, Kate Skehan, Jason Dowling, Helen Warren-Forward, Laura M. O'Connor, Peter B. Greer, Jarad Martin, and John Simpson
- Subjects
Dose-volume histogram ,medicine.medical_treatment ,MRI only radiation therapy ,R895-920 ,Medical physics. Medical radiology. Nuclear medicine ,Medicine ,Dosimetry ,sCT, synthetic computed tomography ,Radiology, Nuclear Medicine and imaging ,Pelvic Neoplasms ,Original Research Article ,Rectal cancer ,Radiation treatment planning ,ICRU, International Commission on Radiation Units and Measurements ,Synthetic CT ,RC254-282 ,Radiation ,Prostate cancer ,medicine.diagnostic_test ,Radiotherapy ,business.industry ,Dose comparison ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Magnetic resonance imaging ,Pelvic cancer ,HU, Hounsfield Unit ,Radiation therapy ,DVH, dose volume histogram ,Radiation therapy treatment planning ,business ,Nuclear medicine ,RED, Relative electron density - Abstract
Background and purpose Magnetic resonance imaging (MRI)-only treatment planning is gaining in popularity in radiation oncology, with various methods available to generate a synthetic computed tomography (sCT) for this purpose. The aim of this study was to validate a sCT generation software for MRI-only radiotherapy planning of male and female pelvic cancers. The secondary aim of this study was to improve dose agreement by applying a derived relative electron and mass density (RED) curve to the sCT. Method and materials Computed tomography (CT) and MRI scans of forty patients with pelvic neoplasms were used in the study. Treatment plans were copied from the CT scan to the sCT scan for dose comparison. Dose difference at reference point, 3D gamma comparison and dose volume histogram analysis was used to validate the dose impact of the sCT. The RED values were optimised to improve dose agreement by using a linear plot. Results The average percentage dose difference at isocentre was 1.2% and the mean 3D gamma comparison with a criteria of 1%/1 mm was 84.0% ± 9.7%. The results indicate an inherent systematic difference in the dosimetry of the sCT plans, deriving from the tissue densities. With the adapted REDmod table, the average percentage dose difference was reduced to −0.1% and the mean 3D gamma analysis improved to 92.9% ± 5.7% at 1%/1 mm. Conclusions CT generation software is a viable solution for MRI-only radiotherapy planning. The option makes it relatively easy for departments to implement a MRI-only planning workflow for cancers of male and female pelvic anatomy.
- Published
- 2021
30. Automatic Segmentation of the Prostate in 3D Magnetic Resonance Images Using Case Specific Deformable Models.
- Author
-
Shekhar Chandra, Jason Dowling, Kai-Kai Shen, Josien P. W. Pluim, Peter B. Greer, Olivier Salvado, and Jurgen Fripp
- Published
- 2011
- Full Text
- View/download PDF
31. Fast Automatic Multi-atlas Segmentation of the Prostate from 3D MR Images.
- Author
-
Jason Dowling, Jurgen Fripp, Shekhar Chandra, Josien P. W. Pluim, Jonathan Lambert 0001, Joel Parker, James Denham, Peter B. Greer, and Olivier Salvado
- Published
- 2011
- Full Text
- View/download PDF
32. Local quality assessment of patient specific synthetic-CT via voxel-wise analysis
- Author
-
Hilda Chourak, Anaïs Barateau, Jean-Claude Nunes, Peter B. Greer, Safaa Tahri, Caroline Lafond, Renaud de Crevoisier, Jason Dowling, and Oscar Acosta
- Published
- 2022
- Full Text
- View/download PDF
33. Automatic MRI Atlas-Based External Beam Radiation Therapy Treatment Planning for Prostate Cancer.
- Author
-
Jason Dowling, Jonathan Lambert 0001, Joel Parker, Peter B. Greer, Jurgen Fripp, James Denham, Sébastien Ourselin, and Olivier Salvado
- Published
- 2010
- Full Text
- View/download PDF
34. Transit dosimetry in dynamic IMRT with an a-Si EPID.
- Author
-
Mahsheed Sabet, Pejman Rowshanfarzad, Fred W. Menk, and Peter B. Greer
- Published
- 2014
- Full Text
- View/download PDF
35. Effects of MR imaging time reduction on substitute CT generation for prostate MRI-only treatment planning
- Author
-
Robba Rai, David Thwaites, Peter B. Greer, Jason Dowling, Tony Young, Gary P Liney, and Lois Holloway
- Subjects
Radiological and Ultrasound Technology ,business.industry ,medicine.medical_treatment ,Biomedical Engineering ,Biophysics ,Gold standard (test) ,Mr imaging ,Radiation therapy ,medicine.anatomical_structure ,Sørensen–Dice coefficient ,Prostate ,Intrafraction motion ,medicine ,Radiology, Nuclear Medicine and imaging ,Nuclear medicine ,business ,Radiation treatment planning ,Instrumentation ,Reduction (orthopedic surgery) ,Biotechnology - Abstract
The introduction of MRI linear accelerators (MR-linacs) and the increased use of MR imaging in radiotherapy, requires improved approaches to MRI-only radiotherapy. MRI provides excellent soft tissue visualisation but does not provide any electron density information required for radiotherapy dose calculation, instead MRI is registered to CT images to enable dose calculations. MRI-only radiotherapy eliminates registration errors and reduces patient discomfort, workload and cost. Electron density requirements may be addressed in different ways, from manually applying bulk density corrections, to more computationally intensive methods to produce substitute CT datasets (sCT), requiring additional sequences, increasing overall imaging time. Reducing MR imaging time would reduce potential artefacts from intrafraction motion and patient discomfort. The aim of this study was to assess the impact of reducing MR imaging time on a hybrid atlas-voxel sCT conversion for prostate MRI-only treatment planning, considering both anatomical and dosimetric parameters. 10 volunteers were scanned on a Siemens Skyra 3T MRI. Sequences included the 3D T2-weighted (T2-w) SPACE sequence used for sCT conversion as previously validated against CT, along with variations to this sequence in repetition time (TR), turbo factor, and combinations of these to reduce the imaging time. All scans were converted to sCT and were compared to the sCT from the original SPACE sequence, evaluating for anatomical changes and dosimetric differences for a standard prostate VMAT plan. Compared to the previously validated T2-w SPACE sequence, scan times were reduced by up to 80%. The external volume and bony anatomy were compared, with all but one sequence meeting a DICE coefficient of 0.9 or better, with the largest variations occurring at the edges of the external body volume. The generated sCT agreed with the gold standard sCT within an isocentre dose of 1% and a gamma pass rate of 99% for a 1%/1 mm gamma tolerance for all but one sequence. This study demonstrates that the MR imaging sequence time was able to be reduced by approximately 80% with similar dosimetric results.
- Published
- 2021
- Full Text
- View/download PDF
36. Experimental evaluation of four-dimensional Magnetic Resonance Imaging for radiotherapy planning of lung cancer
- Author
-
John Simpson, Danny Lee, Jonathan Goodwin, Peter B. Greer, and Terry Perkins
- Subjects
lcsh:Medical physics. Medical radiology. Nuclear medicine ,Short Communication ,radial VIBE ,lcsh:R895-920 ,medicine.medical_treatment ,lcsh:RC254-282 ,Imaging phantom ,4D-CT ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Radiology, Nuclear Medicine and imaging ,In patient ,Self-navigating ,Lung cancer ,Radiation treatment planning ,Radiation ,medicine.diagnostic_test ,business.industry ,Significant difference ,Magnetic resonance imaging ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,Radiation therapy ,Soft tissue contrast ,030220 oncology & carcinogenesis ,4D-MRI ,business ,Nuclear medicine - Abstract
Radiotherapy planning for lung cancer typically requires both 3D and 4D Computed Tomography (CT) to account for respiratory related movement. 4D Magnetic Resonance Imaging (MRI) with self-navigation offers a potential alternative with greater reliability in patients with irregular breathing patterns and improved soft tissue contrast. In this study 4D-CT and a 4D-MRI Radial Volumetric Interpolated Breath-hold Examination (VIBE) sequence was evaluated with a 4D phantom and 13 patient respiratory patterns, simulating tumour motion. Quantification of motion related tumour displacement in 4D-MRI and 4D-CT found no statistically significant difference in mean motion range. The results demonstrated the potential viability of 4D-MRI for lung cancer treatment planning.
- Published
- 2021
- Full Text
- View/download PDF
37. Patient Specific Prostate Segmentation in 3-D Magnetic Resonance Images.
- Author
-
Shekhar S. Chandra, Jason Dowling, Kai-Kai Shen, Parnesh Raniga, Josien P. W. Pluim, Peter B. Greer, Olivier Salvado, and Jurgen Fripp
- Published
- 2012
- Full Text
- View/download PDF
38. OC-0428 Improving local Patient Specific Quality Assurance – a novel remote auditing approach
- Author
-
Alisha Moore, Catharine H. Clark, Shankar Siva, B. Subramanian, Peter B. Greer, Joerg Lehmann, T. Standen, and Mohammad Hussein
- Subjects
Process management ,Oncology ,Computer science ,business.industry ,Radiology, Nuclear Medicine and imaging ,Hematology ,Audit ,Patient specific ,business ,Quality assurance - Published
- 2021
- Full Text
- View/download PDF
39. PO-1683 Spatial Characterization of errors in pseudo-CT generation for MRI-only radiotherapy
- Author
-
Caroline Lafond, A. Barateau, Peter B. Greer, R. De Crevoiser, Jason Dowling, Oscar Acosta, C. Cadin, H. Chourak, and Jean-Claude Nunes
- Subjects
Radiation therapy ,Materials science ,Oncology ,business.industry ,medicine.medical_treatment ,medicine ,Radiology, Nuclear Medicine and imaging ,Hematology ,Nuclear medicine ,business ,Characterization (materials science) - Published
- 2021
- Full Text
- View/download PDF
40. Reduced Dose Posterior to Prostate Correlates With Increased PSA Progression in Voxel-Based Analysis of 3 Randomized Phase 3 Trials
- Author
-
Sarah L. Gulliford, Emma Hall, Allison Steigler, James W. Denham, Jason Dowling, Michael G Jameson, D. Roach, David Joseph, Peter B. Greer, Angel Kennedy, David P. Dearnaley, Marco Marcello, Annette Haworth, Lois Holloway, Matthew R. Sydes, and Martin A. Ebert
- Subjects
Male ,Organs at Risk ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Datasets as Topic ,030218 nuclear medicine & medical imaging ,law.invention ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Randomized controlled trial ,Planned Dose ,law ,Prostate ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Radiation treatment planning ,Proportional Hazards Models ,Radiation ,Proportional hazards model ,business.industry ,Prostatic Neoplasms ,Seminal Vesicles ,Radiotherapy Dosage ,Prostate-Specific Antigen ,medicine.disease ,Clinical trial ,Radiation therapy ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,Disease Progression ,Radiology ,Tomography, X-Ray Computed ,business - Abstract
Purpose Reducing margins during treatment planning to decrease dose to healthy organs surrounding the prostate can risk inadequate treatment of subclinical disease. This study aimed to investigate whether lack of dose to subclinical disease is associated with increased disease progression by using high-quality prostate radiation therapy clinical trial data to identify anatomically localized regions where dose variation is associated with prostate-specific antigen progression (PSAP). Methods and Materials Planned dose distributions for 683 patients of the Trans-Tasman Radiation Oncology Group 03.04 Randomized Androgen Deprivation and Radiotherapy (RADAR) trial were deformably registered onto a single exemplar computed tomography data set. These were divided into high-risk and intermediate-risk subgroups for analysis. Three independent voxel-based statistical tests, using permutation testing, Cox regression modeling, and least absolute shrinkage selection operator feature selection, were applied to identify regions where dose variation was associated with PSAP. Results from the intermediate-risk RADAR subgroup were externally validated by registering dose distributions from the RT01 (n = 388) and Conventional or Hypofractionated High Dose Intensity Modulated Radiotherapy for Prostate Cancer Trial (CHHiP) (n = 253) trials onto the same exemplar and repeating the tests on each of these data sets. Results Voxel-based Cox regression revealed regions where reduced dose was correlated with increased prostate-specific androgen progression. Reduced dose in regions associated with coverage at the posterior prostate, in the immediate periphery of the posterior prostate, and in regions corresponding to the posterior oblique beams or posterior lateral beam boundary, was associated with increased PSAP for RADAR and RT01 patients, but not for CHHiP patients. Reduced dose to the seminal vesicle region was also associated with increased PSAP for RADAR intermediate-risk patients. Conclusions Ensuring adequate dose coverage at the posterior prostate and immediately surrounding posterior region (including the seminal vesicles), where aggressive cancer spread may be occurring, may improve tumor control. It is recommended that particular care be taken when defining margins at the prostate posterior, acknowledging the trade-off between quality of life due to rectal dose and the preferences of clinicians and patients.
- Published
- 2020
- Full Text
- View/download PDF
41. Is multileaf collimator tracking or gating a better intrafraction motion adaptation strategy? An analysis of the TROG 15.01 stereotactic prostate ablative radiotherapy with KIM (SPARK) trial
- Author
-
Andrew Kneebone, Sandra Turner, George Hruby, Thomas Eade, Jeremy T. Booth, Keen Hun Tai, Amy Hayden, Paul J. Keall, Ricky O'Brien, Doan Trang Nguyen, Shankar Siva, Per Rugaard Poulsen, Peter B. Greer, Jarad Martin, Trevor Moodie, Nicholas Hardcastle, and Emily A. Hewson
- Subjects
Male ,image-guided radiation therapy ,0299 Other Physical Sciences, 1112 Oncology and Carcinogenesis ,medicine.medical_treatment ,Gating ,Radiosurgery ,SABR volatility model ,Multileaf collimator tracking ,0203 Classical Physics ,030218 nuclear medicine & medical imaging ,Motion ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,motion management ,Prostate ,Ablative case ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Oncology & Carcinogenesis ,Image-guided radiation therapy ,Real-time image-guided radiotherapy ,business.industry ,Radiotherapy Planning, Computer-Assisted ,Prostatic Neoplasms ,Prostate stereotactic ablative radiotherapy (SABR) ,Hematology ,medicine.disease ,Multileaf collimator ,Radiation therapy ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,Kilovoltage Intrafraction Monitoring (KIM) ,Radiotherapy, Intensity-Modulated ,business ,Nuclear medicine - Abstract
PurposeStereotactic Ablative Radiotherapy (SABR) has recently emerged as a favourable treatment option for prostate cancer patients. With higher doses delivered over fewer fractions, motion adaptation is a requirement for accurate delivery of SABR. This study compared the efficacy of multileaf collimator (MLC) tracking vs. gating as a real-time motion adaptation strategy for prostate SABR patients enrolled in a clinical trial.MethodsForty-four prostate cancer patients treated over five fractions in the TROG 15.01 SPARK trial were analysed in this study. Forty-nine fractions were treated using MLC tracking and 166 fractions were treated using beam gating and couch shifts. A time-resolved motion-encoded dose reconstruction method was used to evaluate the dose delivered using each motion adaptation strategy and compared to an estimation of what would have been delivered with no motion adaptation strategy implemented.ResultsMLC tracking and gating both delivered doses closer to the plan compared to when no motion adaptation strategy was used. Differences between MLC tracking and gating were small with differences in the mean discrepancy from the plan of -0.3% (CTV D98%), 1.4% (CTV D2%), 0.4% (PTV D95%), 0.2% (rectum V30Gy) and 0.0% (bladder V30Gy). On average, 0.5 couch shifts were required per gated fractions with a mean interruption duration of 1.8 ± 2.6 min per fraction treated using gating.ConclusionBoth MLC tracking and gating were effective strategies at improving the accuracy of the dose delivered to the target and organs at risk. While dosimetric performance was comparable, gating resulted in interruptions to treatment.Clinical trial registration numberNCT02397317.
- Published
- 2020
- Full Text
- View/download PDF
42. Voxel‐based supervised machine learning of peripheral zone prostate cancer using noncontrast multiparametric MRI
- Author
-
James W. Denham, John Simpson, Stephan K. Chalup, Neda Gholizadeh, Sabbir Siddique, Peter Lau, Peter B. Greer, James S. Welsh, Saadallah Ramadan, and Jason Dowling
- Subjects
Male ,Computer science ,multiparametric MRI ,Overfitting ,computer.software_genre ,Machine learning ,Sensitivity and Specificity ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,Medical Imaging ,0302 clinical medicine ,Voxel ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Multiparametric Magnetic Resonance Imaging ,Instrumentation ,Retrospective Studies ,Radiation ,medicine.diagnostic_test ,Receiver operating characteristic ,business.industry ,Bayesian optimization ,Prostatic Neoplasms ,Bayes Theorem ,Magnetic resonance imaging ,prostate cancer ,Magnetic Resonance Imaging ,Support vector machine ,machine learning ,Diffusion Tensor Imaging ,radiomics ,Feature (computer vision) ,030220 oncology & carcinogenesis ,probability map ,Supervised Machine Learning ,Artificial intelligence ,business ,computer ,Diffusion MRI - Abstract
Purpose The aim of this study was to develop and assess the performance of supervised machine learning technique to classify magnetic resonance imaging (MRI) voxels as cancerous or noncancerous using noncontrast multiparametric MRI (mp‐MRI), comprised of T2‐weighted imaging (T2WI), diffusion‐weighted imaging (DWI), and advanced diffusion tensor imaging (DTI) parameters. Materials and methods In this work, 191 radiomic features were extracted from mp‐MRI from prostate cancer patients. A comprehensive set of support vector machine (SVM) models for T2WI and mp‐MRI (T2WI + DWI, T2WI + DTI, and T2WI + DWI + DTI) were developed based on novel Bayesian parameters optimization method and validated using leave‐one‐patient‐out approach to eliminate any possible overfitting. The diagnostic performance of each model was evaluated using the area under the receiver operating characteristic curve (AUROC). The average sensitivity, specificity, and accuracy of the models were evaluated using the test data set and the corresponding binary maps generated. Finally, the SVM plus sigmoid function of the models with the highest performance were used to produce cancer probability maps. Results The T2WI + DWI + DTI models using the optimal feature subset achieved the best performance in prostate cancer detection, with the average AUROC , sensitivity, specificity, and accuracy of 0.93 ± 0.03, 0.85 ± 0.05, 0.82 ± 0.07, and 0.83 ± 0.04, respectively. The average diagnostic performance of T2WI + DTI models was slightly higher than T2WI + DWI models (+3.52%) using the optimal radiomic features. Conclusions Combination of noncontrast mp‐MRI (T2WI, DWI, and DTI) features with the framework of a supervised classification technique and Bayesian optimization method are able to differentiate cancer from noncancer voxels with high accuracy and without administration of contrast agent. The addition of cancer probability maps provides additional functionality for image interpretation, lesion heterogeneity evaluation, and treatment management.
- Published
- 2020
- Full Text
- View/download PDF
43. In vivo dosimetry in external beam photon radiotherapy: Requirements and future directions for research, development, and clinical practice☆
- Author
-
Gabriel Paiva-Fonseca, Peter B. Greer, Ben J. Mijnheer, Nuria Jornet, Frank Verhaegen, Boyd McCurdy, Igor Olaciregui-Ruiz, and Sam Beddar
- Subjects
lcsh:Medical physics. Medical radiology. Nuclear medicine ,medicine.medical_specialty ,QUALITY-ASSURANCE ,Computer science ,lcsh:R895-920 ,ERROR-DETECTION ,medicine.medical_treatment ,External beam radiotherapy ,Review Article ,Review ,lcsh:RC254-282 ,Electronic portal imaging device ,030218 nuclear medicine & medical imaging ,EPID DOSIMETRY ,03 medical and health sciences ,0302 clinical medicine ,Software ,Documentation ,In vivo dosimetry ,TOTAL-BODY IRRADIATION ,RADIATION-THERAPY ,DOSE VERIFICATION ,medicine ,MOSFET DETECTORS ,Radiology, Nuclear Medicine and imaging ,Medical physics ,IMRT ,Radiation ,business.industry ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,PORTAL IMAGING DEVICE ,Automation ,Radiation therapy ,System requirements ,030220 oncology & carcinogenesis ,Task group report ,business ,Quality assurance ,PLASTIC SCINTILLATION DETECTORS - Abstract
External beam radiotherapy with photon beams is a highly accurate treatment modality, but requires extensive quality assurance programs to confirm that radiation therapy will be or was administered appropriately. In vivo dosimetry (IVD) is an essential element of modern radiation therapy because it provides the ability to catch treatment delivery errors, assist in treatment adaptation, and record the actual dose delivered to the patient. However, for various reasons, its clinical implementation has been slow and limited. The purpose of this report is to stimulate the wider use of IVD for external beam radiotherapy, and in particular of systems using electronic portal imaging devices (EPIDs). After documenting the current IVD methods, this report provides detailed software, hardware and system requirements for in vivo EPID dosimetry systems in order to help in bridging the current vendor-user gap. The report also outlines directions for further development and research. In vivo EPID dosimetry vendors, in collaboration with users across multiple institutions, are requested to improve the understanding and reduce the uncertainties of the system and to help in the determination of optimal action limits for error detection. Finally, the report recommends that automation of all aspects of IVD is needed to help facilitate clinical adoption, including automation of image acquisition, analysis, result interpretation, and reporting/documentation. With the guidance of this report, it is hoped that widespread clinical use of IVD will be significantly accelerated.
- Published
- 2020
44. Verification of stereotactic radiosurgery plans for multiple brain metastases using a virtual phantom-based procedure
- Author
-
Juan-Francisco Calvo-Ortega, Peter B. Greer, Sandra Moragues-Femenía, Miguel Pozo-Massó, and Joan Casals-Farran
- Subjects
Oncology ,Radiology, Nuclear Medicine and imaging - Abstract
The purpose of this study was to describe the use of the VIPER software for patient-specific quality assurance (PSQA) of single-isocenter multitarget (SIMT) stereotactic radiosurgery (SRS) plans.Twenty clinical of intensity-modulated (IMRT) SIMT SRS plans were reviewed. A total of 88 brain metastases were included. Number of lesions per plan and their individual volumes ranged from 2 to 35 and from 0.03 to 32.8 cmThe averages (± 1 SD) of the 3D GPRs over the 20 SRS plans were: 99.9 ± 0.2%, 99.7 ± 0.3%, 99.6 ± 0.5%, 99.3 ± 0.9%,99.1 ± 1.6%, 99.0 ± 1.6%, and 98.5 ± 3.3%, for dose thresholds of 10%, 20%, 30%, 50%, 70%, 80% and 90% respectively.This work shows the feasibility of the VIPER software for PSQA of SIMT SRS plans, being a reliable alternative to commercially available 2D detector arrays.
- Published
- 2022
45. A system for real‐time monitoring of breath‐hold via assessment of internal anatomy in tangential breast radiotherapy
- Author
-
Tomas Kron, Elena N. Vasina, Peter B. Greer, Joerg Lehmann, and David Thwaites
- Subjects
Accuracy and precision ,lung depth ,Stereotactic body radiation therapy ,Computed tomography dose index ,Breast radiotherapy ,Breast Neoplasms ,central lung distance ,Imaging phantom ,Standard deviation ,deep inspiration breath‐hold (DIBH) ,Breath Holding ,Portal imaging ,Radiation Oncology Physics ,Humans ,Radiology, Nuclear Medicine and imaging ,Instrumentation ,Lung ,Physics ,Ground truth ,Radiation ,Radiotherapy Planning, Computer-Assisted ,tangential breast radiotherapy ,Heart ,Radiotherapy Dosage ,Anatomy ,real‐time portal imaging ,Female ,Tomography, X-Ray Computed ,EPID ,monitoring of internal anatomy - Abstract
The deep inspiration breath‐hold (DIBH) technique assists in sparing the heart, lungs, and liver during breast radiotherapy (RT). The quality of DIBH is currently assessed via surrogates which correlate to varying degrees with the patient's internal anatomy. Since modern linacs are equipped with an electronic portal imaging device (EPID), images of the irradiated anatomy streamed from EPIDs and analyzed in real time could significantly improve assessment of the quality of DIBH. A system has been developed to quantify the quality of DIBH during tangential breast RT by analyzing the “beam's eye view” images of the treatment fields. The system measures the lung depth (LD) and the distance from the breast surface to the posterior tangential radiation field edge (skin distance, SD) at three user‐defined locations. LD and SD measured in real time in EPID images of two RT phantoms showing different geometrical characteristics of their chest wall regions (computed tomography dose index [CTDI] and “END‐TO‐END” stereotactic body radiation therapy [E2E SBRT]) were compared with ground truth displacements provided by a precision motion platform. Performance of the new system was evaluated via static and dynamic (sine wave motion) measurements of LD and SD, covering clinical situations with stable and unstable breath‐hold. The accuracy and precision of the system were calculated as the mean and standard deviation of the differences between the ground truth and measured values. The accuracy of the static measurements of LD and SD for the CTDI phantom was 0.31 (1.09) mm [mean (standard deviation)] and –0.10 (0.14) mm, respectively. The accuracy of the static measurements for E2E SBRT phantom was 0.01 (0.18) mm and 0.05 (0.08) mm. The accuracy of the dynamic LD and SD measurements for the CTDI phantom was –0.50 (1.18) mm and 0.01 (0.12) mm, respectively. The accuracy of the dynamic measurements for E2E SBRT phantom was –0.03 (0.19) mm and 0.01 (0.11) mm.
- Published
- 2021
46. Comparison of Deep Learning-Based and Patch-Based Methods for Pseudo-CT Generation in MRI-Based Prostate Dose Planning
- Author
-
Eugenia Mylona, Peter B. Greer, Jason Dowling, Renaud de Crevoisier, Jean-Claude Nunes, Caroline Lafond, Hervé Saint-Jalmes, A. Barateau, John S. H. Baxter, Joël Castelli, A. Largent, Oscar Acosta, Laboratoire Traitement du Signal et de l'Image (LTSI), Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM), Calvary Mater Newcastle Hospital, yi2011, Prostate Cancer Foundation of Australia, Cancer Council New South Wales research, Cure Cancer Australia, Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut National de la Santé et de la Recherche Médicale (INSERM), and CCSD, Accord Elsevier
- Subjects
Male ,Cancer Research ,pseudo-CT generation ,Mean squared error ,Urinary Bladder ,Planning target volume ,dose calculation ,Bone and Bones ,Pelvis ,030218 nuclear medicine & medical imaging ,Dose planning ,03 medical and health sciences ,0302 clinical medicine ,Reference Values ,Prostate ,Hounsfield scale ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,MRI-only radiotherapy ,[SDV.IB] Life Sciences [q-bio]/Bioengineering ,Radiation ,medicine.diagnostic_test ,business.industry ,Rectum ,Uncertainty ,Prostatic Neoplasms ,deep learning ,Femur Head ,Radiotherapy Dosage ,Magnetic resonance imaging ,prostate cancer ,Magnetic Resonance Imaging ,Volumetric modulated arc therapy ,3. Good health ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,[SDV.IB]Life Sciences [q-bio]/Bioengineering ,Radiotherapy, Intensity-Modulated ,Tomography ,Tomography, X-Ray Computed ,business ,Nuclear medicine - Abstract
Purpose Deep learning methods (DLMs) have recently been proposed to generate pseudo-CT (pCT) for magnetic resonance imaging (MRI) based dose planning. This study aims to evaluate and compare DLMs (U-Net and generative adversarial network [GAN]) using various loss functions (L2, single-scale perceptual loss [PL], multiscale PL, weighted multiscale PL) and a patch-based method (PBM). Methods and Materials Thirty-nine patients received a volumetric modulated arc therapy for prostate cancer (78 Gy). T2-weighted MRIs were acquired in addition to planning CTs. The pCTs were generated from the MRIs using 7 configurations: 4 GANs (L2, single-scale PL, multiscale PL, weighted multiscale PL), 2 U-Net (L2 and single-scale PL), and the PBM. The imaging endpoints were mean absolute error and mean error, in Hounsfield units, between the reference CT (CTref) and the pCT. Dose uncertainties were quantified as mean absolute differences between the dose volume histograms (DVHs) calculated from the CTref and pCT obtained by each method. Three-dimensional gamma indexes were analyzed. Results Considering the image uncertainties in the whole pelvis, GAN L2 and U-Net L2 showed the lowest mean absolute error (≤34.4 Hounsfield units). The mean errors were not different than 0 (P ≤ .05). The PBM provided the highest uncertainties. Very few DVH points differed when comparing GAN L2 or U-Net L2 DVHs and CTref DVHs (P ≤ .05). Their dose uncertainties were ≤0.6% for the prostate planning target Volume V95%, ≤0.5% for the rectum V70Gy, and ≤0.1% for the bladder V50Gy. The PBM, U-Net PL, and GAN PL presented the highest systematic dose uncertainties. The gamma pass rates were >99% for all DLMs. The mean calculation time to generate 1 pCT was 15 s for the DLMs and 62 min for the PBM. Conclusions Generating pCT for MRI dose planning with DLMs and PBM provided low-dose uncertainties. In particular, the GAN L2 and U-Net L2 provided the lowest dose uncertainties together with a low computation time.
- Published
- 2019
- Full Text
- View/download PDF
47. Assessment of the accuracy of truebeam intrafraction motion review (IMR) system for prostate treatment guidance
- Author
-
John Simpson, Joerg Lehmann, Guneet Kaur, and Peter B. Greer
- Subjects
Male ,Computer science ,Biomedical Engineering ,Biophysics ,General Physics and Astronomy ,Context (language use) ,Signal-To-Noise Ratio ,Imaging phantom ,Displacement (vector) ,030218 nuclear medicine & medical imaging ,Motion ,03 medical and health sciences ,Imaging, Three-Dimensional ,0302 clinical medicine ,Fiducial Markers ,Calibration ,Humans ,Radiology, Nuclear Medicine and imaging ,Phantoms, Imaging ,Prostate ,Truebeam ,Prostatic Neoplasms ,Dose-Response Relationship, Radiation ,Feature (computer vision) ,030220 oncology & carcinogenesis ,Trajectory ,Fiducial marker ,Biomedical engineering - Abstract
Intrafraction motion review (IMR), a real-time 2D, motion management feature of the Varian Truebeam™ incorporates triggered imaging, automatic fiducial marker detection and automatic beam hold. With the increasing adoption of high dose per fraction stereotactic body radiotherapy (SBRT) this system provides a potential means to ensure treatment accuracy. The goal of this study was therefore to investigate and quantify key performance characteristics of IMR for prostate treatment guidance. Phantom experiments were performed with a custom Computerized Imaging Reference Systems, Inc (CIRS) pelvis phantom with implanted gold seeds and the Hexamotion™ 5D motion platform. The system accuracy was assessed statically and under typical prostate motion trajectories. The IMR functionality and marker detectability was tested under different anatomical conditions and with different imaging acquisition modes. Imaging dose for triggered imaging modes was determined using an ionisation chamber based on IPEMB dose calibration protocol for kV energies. For zero displacement, the IMR demonstrated submillimeter agreement with the known position. Similarly, dynamic motion differences between the IMR reported position and 2D trajectory displacement were within 1 mm. Static displacement in the anterior direction was reported by IMR as sinusoidal motion on the x-axis (kV angle). The 2D nature of IMR limits the ability to detect motion out of the plane of the kV image detector. Using typical clinical imaging settings, imaging dose determined at the patient surface was 2.58 mGy/frame and the corresponding IMR displayed dose was 2.63 mGy/frame. The methodology used was able to quantify the accuracy of the IMR system. The IMR was able to accurately and consistently report fiducial positions within the limitations inherent of a 2D system. IMR is fully integrated with the Truebeam system with an easy to use and efficient workflow and is clinically beneficial especially within the context of SBRT.
- Published
- 2019
- Full Text
- View/download PDF
48. Pseudo-CT Generation for MRI-Only Radiation Therapy Treatment Planning: Comparison Among Patch-Based, Atlas-Based, and Bulk Density Methods
- Author
-
Jean-Claude Nunes, Caroline Lafond, Peter B. Greer, Oscar Acosta, A. Barateau, Renaud de Crevoisier, Jason Dowling, A. Largent, Hervé Saint-Jalmes, Laboratoire Traitement du Signal et de l'Image (LTSI), Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut National de la Santé et de la Recherche Médicale (INSERM), CRLCC Eugène Marquis (CRLCC), University of Newcastle [Australia] (UoN), Commonwealth Scientific and Industrial Research Organisation [Canberra] (CSIRO), Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM), and University of Newcastle [Callaghan, Australia] (UoN)
- Subjects
Male ,Cancer Research ,Mean squared error ,medicine.medical_treatment ,Radiotherapy treatment planning ,chemical and pharmacologic phenomena ,pseudo-CT ,030218 nuclear medicine & medical imaging ,Cohort Studies ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Atlas (anatomy) ,Hounsfield scale ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Radiometry ,Radiation treatment planning ,Aged ,Radiation ,medicine.diagnostic_test ,business.industry ,Radiotherapy Planning, Computer-Assisted ,fungi ,Prostate ,Prostatic Neoplasms ,Reproducibility of Results ,Radiotherapy Dosage ,Magnetic resonance imaging ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,3. Good health ,Radiation therapy ,medicine.anatomical_structure ,Oncology ,patch-based method ,030220 oncology & carcinogenesis ,[SDV.IB]Life Sciences [q-bio]/Bioengineering ,Radiotherapy, Intensity-Modulated ,Tomography ,Tomography, X-Ray Computed ,business ,Nuclear medicine ,[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processing - Abstract
Purpose Methods have been recently developed to generate pseudo–computed tomography (pCT) for dose calculation in magnetic resonance imaging (MRI)–only radiation therapy. This study aimed to propose an original nonlocal mean patch-based method (PBM) and to compare this PBM to an atlas-based method (ABM) and to a bulk density method (BDM) for prostate MRI-only radiation therapy. Materials and Methods Thirty-nine patients received a volumetric modulated arc therapy for prostate cancer. In addition to the planning computed tomography (CT) scans, T2-weighted MRI scans were acquired. pCTs were generated from MRIs using 3 methods: an original nonlocal mean PBM, ABM, and BDM. The PBM was performed using feature extraction and approximate nearest neighbor search in a training cohort. The PBM accuracy was evaluated in a validation cohort by using imaging and dosimetric endpoints. Imaging endpoints included mean absolute error and mean error between Hounsfield units of the pCT and the reference CT (CTref). Dosimetric endpoints were based on dose-volume histograms calculated from the CTref and the pCTs for various volumes of interest and on 3-dimensional gamma analyses. The PBM uncertainties were compared with those of the ABM and BDM. Results The mean absolute error and mean error obtained from the PBM were 41.1 and –1.1 Hounsfield units. The PBM dose-volume histogram differences were 0.7% for prostate planning target volume V95%, 0.5% for rectum V70Gy, and 0.2% for bladder V50Gy. Compared with ABM and BDM, PBM provided significantly lower dose uncertainties for the prostate planning target volume (70-78 Gy), the rectum (8.5-29 Gy, 40-48 Gy, and 61-73 Gy), and the bladder (12-78 Gy). The PBM mean gamma pass rate (99.5%) was significantly higher than that of ABM (94.9%) or BDM (96.1%). Conclusions The proposed PBM provides low uncertainties with dose planned on CTref. These uncertainties were smaller than those of ABM and BDM and are unlikely to be clinically significant.
- Published
- 2019
- Full Text
- View/download PDF
49. An inter-centre statistical scale standardisation for quantitatively evaluating prostate tissue on T2-weighted MRI
- Author
-
Peter Lau, Peter B. Greer, John Simpson, Neda Gholizadeh, Saadallah Ramadan, and T. Fuangrod
- Subjects
Male ,Coefficient of variation ,Statistics as Topic ,Biomedical Engineering ,Biophysics ,General Physics and Astronomy ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Prostate ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Reproducibility ,medicine.diagnostic_test ,business.industry ,Ischioanal fossa ,Magnetic resonance imaging ,Reference Standards ,Magnetic Resonance Imaging ,Intensity (physics) ,Peripheral zone ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,business ,T2 weighted ,Nuclear medicine ,Algorithms - Abstract
Magnetic resonance images (MRI) require intensity standardisation if they are used for the purpose of quantitative analysis as inherent variations in image intensity levels between different image sets are manifest due to technical factors. One approach is to standardise the image intensity values using a statistically applied biological reference tissue. The aim of this study is to compare the performance of differing candidate biological reference tissues for standardising T2WI intensity distributions. Fifty-one prostate cancer patients across two centres with different scanners were evaluated using the percentage interpatient coefficient of variation (%interCV) for four different biological references; femoral bone marrow, ischioanal fossa, obturator-internus muscle and bladder urine. The tissue with the highest reproducibility (lowest %interCV) in both centres was used for intensity standardisation of prostate T2WI using three different statistical measures (mean, Z-score, median + Interquartile Range). The performance of different standardisation methods was evaluated from the assessment of image intensity histograms and the percentage normalised root mean square error (%NRSME) of the healthy peripheral zone tissue. Ischioanal fossa as a reference tissue demonstrated the highest reproducibility with %interCV of 18.9 for centre1 and 11.2 for centre2. Using ischioanal fossa for statistical intensity standardisation and the median + Interquartile Range method demonstrated the lowest %NRMSE across centres for healthy peripheral zone tissues. This study demonstrates ischioanal fossa as a preferred reference tissue for standardising intensity values from T2WI of the prostate. Subsequent image standardisation using the median + Interquartile Range intensity of the reference tissue demonstrated a robust and reliable standardisation method for quantitative image assessment.
- Published
- 2019
- Full Text
- View/download PDF
50. Multi‐observer contouring of male pelvic anatomy: Highly variable agreement across conventional and emerging structures of interest
- Author
-
Peter B. Greer, Martin A. Ebert, Alycea McGrath, James W. Denham, John H L Matthews, Michele Krawiec, Jason Dowling, Sean Bydder, Rohen White, D. Roach, Karen Lim, Hendrick Tan, Jeremiah de Leon, Angel Kennedy, Megan Berry, Robba Rai, Jeremy D Croker, Robert Jan Smeenk, Lois Holloway, and Michael G Jameson
- Subjects
Male ,Membranous urethra ,Intraclass correlation ,Rectum ,Pelvis ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,All institutes and research themes of the Radboud University Medical Center ,0302 clinical medicine ,Prostate ,medicine ,Humans ,Trigone of urinary bladder ,Radiology, Nuclear Medicine and imaging ,Observer Variation ,Contouring ,Pelvic floor ,business.industry ,Radiotherapy Planning, Computer-Assisted ,Prostatic Neoplasms ,Neurovascular bundle ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Oncology ,Urological cancers Radboud Institute for Health Sciences [Radboudumc 15] ,030220 oncology & carcinogenesis ,Anatomic Landmarks ,Tomography, X-Ray Computed ,Nuclear medicine ,business - Abstract
Introduction This study quantified inter-observer contouring variations for multiple male pelvic structures, many of which are of emerging relevance for prostate cancer radiotherapy progression and toxicity response studies. Methods Five prostate cancer patient datasets (CT and T2-weighted MR) were distributed to 13 observers for contouring. CT structures contoured included the clinical target volume (CTV), seminal vesicles, rectum, colon, bowel bag, bladder and peri-rectal space (PRS). MR contours included CTV, trigone, membranous urethra, penile bulb, neurovascular bundle and multiple pelvic floor muscles. Contouring variations were assessed using the intraclass correlation coefficient (ICC), Dice similarity coefficient (DSC), and multiple additional metrics. Results Clinical target volume (CT and MR), bladder, rectum and PRS contours showed excellent inter-observer agreement (median ICC = 0.97; 0.99; 1.00; 0.95; 0.90, DSC = 0.83 ± 0.05; 0.88 ± 0.05; 0.93 ± 0.03; 0.81 ± 0.07; 0.80 ± 0.06, respectively). Seminal vesicle contours were more variable (ICC = 0.75, DSC = 0.73 ± 0.14), while colon and bowel bag contoured volumes were consistent (ICC = 0.97; 0.97), but displayed poor overlap (DSC = 0.58 ± 0.22; 0.67 ± 0.21). Smaller MR structures showed significant inter-observer variations, with poor overlap for trigone, membranous urethra, penile bulb, and left and right neurovascular bundles (DSC = 0.44 ± 0.22; 0.41 ± 0.21; 0.66 ± 0.21; 0.16 ± 0.17; 0.15 ± 0.15). Pelvic floor muscles recorded moderate to strong inter-observer agreement (ICC = 0.50-0.97), although large outlier variations were observed. Conclusions Inter-observer contouring variation was significant for multiple pelvic structures contoured on MR.
- Published
- 2019
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.