133 results on '"Reuben Ramphal"'
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2. High pyocyanin production and non-motility of Pseudomonas aeruginosa isolates are correlated with septic shock or death in bacteremic patients.
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Asmita Gupte, Jeevan Jyot, Malleswari Ravi, and Reuben Ramphal
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Medicine ,Science - Abstract
Studies of the outcome of Pseudomonas aeruginosa bacteremia (Pab) have focused mainly on antibiotic appropriateness. However, P. aeruginosa possesses many virulence factors whose roles in outcomes have not been examined in humans, except for the type III secretion system (T3SS) toxins. The purpose of this study was to examine the role of virulence factors other than the T3SS toxins. Bacterial isolates were collected from 75 patients who suffered from Pa blood stream infections. Host factors such as neutropenia, immunosuppression, comorbidities, time to effective antibiotics, source of bacteremia, and presence of multidrug resistant (MDR) isolate were studied. The isolates were analyzed for the presence of toxin genes, proteolytic activity, swimming and twitching motility, and pyocyanin production. The data were analyzed to ascertain which virulence factors correlated with poor outcomes defined as septic shock or death (SS) within 7 days. Septic shock or death occurred in 25/75 patients. Univariate analysis identified age as a host factor that exerted a significant effect on these outcomes. Ineffective antibiotics administered during the first 24 hours of treatment or MDR P. aeruginosa did not influence the frequency of SS, nor did the presence of lasB, exoA, exoS exoU, plcH genes and proteolytic activity. However, 6/8 patients infected with non-motile isolates, developed SS, p = 0.014 and 5/6 isolates that produced large amounts of pyocyanin (>18ug/ml), were associated with SS, p = 0.014. Multivariate analysis indicated that the odds ratio (OR) for development of SS with a non-motile isolate was 6.8, with a 95% confidence interval (CI) (1.37, 51.5), p = 0.030 and with high pyocyanin producing isolates, an OR of 16.9, 95% CI = (2.27, 360), p = .017. This study evaluating the role of microbial factors that significantly effect outcomes following Pa bloodstream infection suggests that P. aeruginosa strains showing high pyocyanin production and the lack of motility independently increase the risk of SS.
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- 2021
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3. Pseudomonas aeruginosa Lipoxygenase LoxA Contributes to Lung Infection by Altering the Host Immune Lipid Signaling
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Eric Morello, Teresa Pérez-Berezo, Chloé Boisseau, Thomas Baranek, Antoine Guillon, Déborah Bréa, Philippe Lanotte, Xavier Carpena, Nicolas Pietrancosta, Virginie Hervé, Reuben Ramphal, Nicolas Cenac, and Mustapha Si-Tahar
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Pseudomonas aeruginosa ,lipoxygenase ,lungs ,infection ,lipid mediators ,inflammation ,Microbiology ,QR1-502 - Abstract
Pseudomonas aeruginosa is an opportunistic bacteria and a major cause of nosocomial pneumonia. P. aeruginosa has many virulence factors contributing to its ability to colonize the host. LoxA is a lipoxygenase enzyme secreted by P. aeruginosa that oxidizes polyunsaturated fatty acids. Based on previous in vitro biochemical studies, several biological roles of LoxA have been hypothesized, including interference of the host lipid signaling, and modulation of bacterial invasion properties. However, the contribution of LoxA to P. aeruginosa lung pathogenesis per se remained unclear. In this study, we used complementary in vitro and in vivo approaches, clinical strains of P. aeruginosa as well as lipidomics technology to investigate the role of LoxA in lung infection. We found that several P. aeruginosa clinical isolates express LoxA. When secreted in the lungs, LoxA processes a wide range of host polyunsaturated fatty acids, which further results in the production of bioactive lipid mediators (including lipoxin A4). LoxA also inhibits the expression of major chemokines (e.g., MIPs and KC) and the recruitment of key leukocytes. Remarkably, LoxA promotes P. aeruginosa persistence in lungs tissues. Hence, our study suggests that LoxA-dependent interference of the host lipid pathways may contribute to P. aeruginosa lung pathogenesis.
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- 2019
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4. Computed Tomography (CT) Scanning Facilitates Early Identification of Neonatal Cystic Fibrosis Piglets.
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Antoine Guillon, Claire Chevaleyre, Celine Barc, Mustapha Berri, Hans Adriaensen, François Lecompte, Thierry Villemagne, Jérémy Pezant, Rémi Delaunay, Joseph Moënne-Loccoz, Patricia Berthon, Andrea Bähr, Eckhard Wolf, Nikolai Klymiuk, Sylvie Attucci, Reuben Ramphal, Pierre Sarradin, Dominique Buzoni-Gatel, Mustapha Si-Tahar, and Ignacio Caballero
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Medicine ,Science - Abstract
Cystic Fibrosis (CF) is the most prevalent autosomal recessive disease in the Caucasian population. A cystic fibrosis transmembrane conductance regulator knockout (CFTR-/-) pig that displays most of the features of the human CF disease has been recently developed. However, CFTR-/- pigs presents a 100% prevalence of meconium ileus that leads to death in the first hours after birth, requiring a rapid diagnosis and surgical intervention to relieve intestinal obstruction. Identification of CFTR-/- piglets is usually performed by PCR genotyping, a procedure that lasts between 4 to 6 h. Here, we aimed to develop a procedure for rapid identification of CFTR-/- piglets that will allow placing them under intensive care soon after birth and immediately proceeding with the surgical correction.Male and female CFTR+/- pigs were crossed and the progeny was examined by computed tomography (CT) scan to detect the presence of meconium ileus and facilitate a rapid post-natal surgical intervention. Genotype was confirmed by PCR. CT scan presented a 94.4% sensitivity to diagnose CFTR-/- piglets. Diagnosis by CT scan reduced the birth-to-surgery time from a minimum of 10 h down to a minimum of 2.5 h and increased the survival of CFTR-/- piglets to a maximum of 13 days post-surgery as opposed to just 66 h after later surgery.CT scan imaging of meconium ileus is an accurate method for rapid identification of CFTR-/- piglets. Early CT detection of meconium ileus may help to extend the lifespan of CFTR-/- piglets and, thus, improve experimental research on CF, still an incurable disease.
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- 2015
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5. Correction: A Crucial Role of Flagellin in the Induction of Airway Mucus Production by.
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Fatima BenMohamed, Ignacio Garcia-Verdugo, Mathieu Medina, Viviane Balloy, Michel Chignard, Reuben Ramphal, and Lhousseine Touqui
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Medicine ,Science - Published
- 2012
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6. A crucial role of Flagellin in the induction of airway mucus production by Pseudomonas aeruginosa.
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Fatima Ben Mohamed, Ignacio Garcia-Verdugo, Mathieu Medina, Viviane Balloy, Michel Chignard, Reuben Ramphal, and Lhousseine Touqui
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Medicine ,Science - Abstract
Pseudomonas aeruginosa is an opportunistic pathogen involved in nosocomial infections. Flagellin is a P. aeruginosa virulence factor involved in host response to this pathogen. We examined the role of flagellin in P. aeruginosa-induced mucus secretion. Using a mouse model of pulmonary infection we showed that PAK, a wild type strain of P. aeruginosa, induced airway mucus secretion and mucin muc5ac expression at higher levels than its flagellin-deficient mutant (ΔFliC). PAK induced expression of MUC5AC and MUC2 in both human airway epithelial NCI-H292 cell line and in primary epithelial cells. In contrast, ΔFliC infection had lower to no effect on MUC5AC and MUC2 expressions. A purified P. aeruginosa flagellin induced MUC5AC expression in parallel to IL-8 secretion in NCI-H292 cells. Accordingly, ΔFliC mutant stimulated IL-8 secretion at significantly lower levels compared to PAK. Incubation of NCI-H292 cells with exogenous IL-8 induced MUC5AC expression and pre-incubation of these cells with an anti-IL-8 antibody abrogated flagellin-mediated MUC5AC expression. Silencing of TLR5 and Naip, siRNA inhibited both flagellin-induced MUC5AC expression and IL-8 secretion. Finally, inhibition of ERK abolished the expression of both PAK- and flagellin-induced MUC5AC. We conclude that: (i) flagellin is crucial in P. aeruginosa-induced mucus hyper-secretion through TLR5 and Naip pathways; (ii) this process is mediated by ERK and amplified by IL-8. Our findings help understand the mechanisms involved in mucus secretion during pulmonary infectious disease induced by P. aeruginosa, such as in cystic fibrosis.
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- 2012
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7. Pseudomonas aeruginosa LPS or flagellin are sufficient to activate TLR-dependent signaling in murine alveolar macrophages and airway epithelial cells.
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Eloïse Raoust, Viviane Balloy, Ignacio Garcia-Verdugo, Lhousseine Touqui, Reuben Ramphal, and Michel Chignard
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Medicine ,Science - Abstract
BACKGROUND:The human lung is exposed to a large number of airborne pathogens as a result of the daily inhalation of 10,000 liters of air. Innate immunity is thus essential to defend the lungs against these pathogens. This defense is mediated in part through the recognition of specific microbial ligands by Toll-like receptors (TLR) of which there are at least 10 in humans. Pseudomonas aeruginosa is the main pathogen that infects the lungs of cystic fibrosis patients. Based on whole animal experiments, using TLR knockout mice, the control of this bacterium is believed to occur by the recognition of LPS and flagellin by TLRs 2,4 and 5, respectively. METHODOLOGY/PRINCIPAL FINDINGS:In the present study, we investigated in vitro the role of these same TLR and ligands, in alveolar macrophage (AM) and epithelial cell (EC) activation. Cellular responses to P. aeruginosa was evaluated by measuring KC, TNF-alpha, IL-6 and G-CSF secretion, four different markers of the innate immune response. AM and EC from WT and TLR2, 4, 5 and MyD88 knockout mice for were stimulated with the wild-type P. aeruginosa or with a mutant devoid of flagellin production. CONCLUSIONS/SIGNIFICANCE:The results clearly demonstrate that only two ligand/receptor pairs are necessary for the induction of KC, TNF-alpha, and IL-6 synthesis by P. aeruginosa-activated cells, i.e. TLR2,4/LPS and TLR5/flagellin. Either ligand/receptor pair is sufficient to sense the bacterium and to trigger cell activation, and when both are missing lung EC and AM are unable to produce such a response as were cells from MyD88(-/-) mice.
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- 2009
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8. Re-evaluation of cefepime or piperacillin/tazobactam to decrease use of carbapenems in ESBL-producing Enterobacterales urinary tract infections (REDUCE-UTI)
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Alexander C Branton, Catherine H Vu, Veena Venugopalan, Barbara A Santevecchi, Kartikeya Cherabuddi, Reuben Ramphal, Tanvi Manohar, and Kathryn E Desear
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Microbiology (medical) ,Infectious Diseases ,Immunology ,Immunology and Allergy ,Microbiology - Abstract
ObjectivesTo re-examine the use of non-carbapenems (NCBPs), specifically piperacillin/tazobactam and cefepime, for ESBL-producing Enterobacterales (ESBL-E) urinary tract infections (UTIs).PatientsRetrospective cohort study of adults hospitalized between January 2016 and June 2020 with pyuria on urinalysis, a urine culture positive for ESBL-E treated with a study antibiotic (meropenem, ertapenem, cefepime or piperacillin/tazobactam) and did not meet criteria for study exclusion.MethodsTo compare carbapenems (CBPs) with cefepime or piperacillin/tazobactam for the treatment of ESBL-E UTI. The primary outcome was clinical cure, defined as complete resolution of signs and symptoms of infection. Secondary outcomes included in-hospital mortality, recurrence within 30 days and resistance emergence within 30 days.ResultsOne-hundred and thirty-three patients were included, based on definitive therapy received; 69 (51.9%) received CBP and 64 (48.1%) received NCBP therapy. Of the total patient population, 17 (12.8%) were admitted to the ICU, 84 (63.1%) had a complicated UTI and 64 (48.1%) had pyelonephritis. There was no difference in clinical cure between the CBP and NCBP groups (95.7% versus 96.9%, P = 0.999). Additionally, no differences in secondary outcomes were observed.ConclusionsWhen compared with CBPs, cefepime and piperacillin/tazobactam resulted in similar clinical cure, in-hospital mortality, recurrence and resistance emergence in the treatment of ESBL-E UTI.
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- 2023
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9. No human exists in isolation or as an island: The outcomes of a multidisciplinary, global, and context-specific COVID-19 consortium
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Diana Hornby, Janice Limson, Chun-Yu Lin, Andrew Abbott, Daniel Urbine, Venkat Narayan Chekuri, Sharli Anne Paphitis, Hala Mohamed Moussa, Jonathan J. Cho, Reuben Ramphal, Anthony Byrne, Daisy Lekharu, Sunitha C. Srinivas, Lennox K Archibald, Shivanjali Shankaran, Frederick S. Southwick, Gautam Kalyatanda, Anna Shifrin, Roman Tandlich, Pretesh Rohan Kiran, Shraddha Patnala, Maneesh Paul-Satyaseela, and Matthew K Edwards
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0301 basic medicine ,Coronavirus disease 2019 (COVID-19) ,Isolation (health care) ,SARS-CoV-2 ,Distancing ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,COVID-19 ,General Medicine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Multidisciplinary approach ,030220 oncology & carcinogenesis ,Preparedness ,Development economics ,Pandemic ,Context specific ,Humans ,Business ,Pandemics - Abstract
A pandemic, by definition, involves the whole world being impacted by a common threat and calls for a united response. A highly virulent pathogen, the novel coronavirus (SARS-CoV-2) has affected every facet of modern life. The virus has revealed the world’s underlying inherent inequities, such as economic and food insecurity and availability of and access to a functional healthcare system, not to mention preparedness of nations to manage a coordinated pandemic response. For these reasons, Coronavirus disease (COVID-19) represents an unprecedented challenge to economies, healthcare systems, and nations alike. The closing of international and internal borders, physical distancing, and the resulting decrease in travel and trade have led countries to become insular geographically, socially, and economically. Somewhat ironically, this necessitates an increased need for greater collaboration between countries and other stakeholders to control the transmission of SARS-CoV-2 and better manage the global crisis upon us, so as to mitigate the long-term sequelae of this pandemic.
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- 2020
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10. 1257. Re-Evaluation of Cefepime or Piperacillin-Tazobactam to Decrease Use of Carbapenems in ESBL-Producing Enterobacterales Urinary Tract Infections (REDUCE-UTI)
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Alexander C Branton, Catherine H Vu, Venugopalan Veena, Barbara A Santevecchi, Reuben Ramphal, Kartikeya Cherabuddi, Tanvi Manohar, David Rodriguez, Andrea Tello, and Kathryn DeSear
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AcademicSubjects/MED00290 ,Infectious Diseases ,Oncology ,Poster Abstracts - Abstract
Background Carbapenems (CBP) are considered first-line for infections caused by extended-spectrum beta-lactamase-producing Enterobacterales (ESBL-E). However, recent literature suggests that cefepime (FEP) and piperacillin-tazobactam (TZP) may produce similar outcomes vs. CBPs for the treatment of ESBL-E urinary tract infections (UTIs). The goal of this study was to determine if non-carbapenem (NCBP) therapy with FEP or TZP is as effective as CBPs for the treatment of ESBL-E UTIs. Methods This was a retrospective observational study of patients admitted to the hospital from January 1st, 2016 to June 30th, 2020 with a urine culture positive for ESBL-E. Patients were included if they received a study antibiotic (meropenem, ertapenem, TZP, or FEP). Patients were excluded if they had any of the following: absence of pyuria, prior receipt of study antibiotic, CBP-resistant organism isolated in urine culture, polymicrobial urine culture, end-stage renal disease, or concomitant gram-negative infection. The primary outcome was clinical cure defined as complete resolution of signs and symptoms of infection. Secondary outcomes included in-hospital mortality, recurrence within 30 days, and resistance within 30 days. Results A total of 133 patients were included based on definitive therapy received; 69 (52%) received CBP and 64 (48%) received NCBP therapy. Of the total patient population, 17 (13%) were admitted to the intensive care unit, 84 (63%) had a complicated UTI, and 64 (48%) had pyelonephritis. Baseline characteristics were similar between the two groups. There was no difference in clinical cure between the CBP and NCBP therapy groups (96% vs. 97%, p = 1.0). Additionally, no differences in secondary outcomes were observed. Subgroup analyses were performed in patients with specific pathogens, uncontrolled genitourinary source, complicated UTI, and pyelonephritis. These analyses did not reveal any differences in primary or secondary outcomes between the two groups. Conclusion FEP and TZP may be reasonable CBP-sparing alternatives for the treatment of ESBL-E UTIs as clinical and microbiological outcomes were similar with these NCBP agents vs. CBPs in this study population. Disclosures Venugopalan Veena, PharmD, Melinta (Other Financial or Material Support, Received a stipend for participation in a drug registry)Merck (Other Financial or Material Support, Received a stipend for participation in a drug registry)
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- 2021
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11. Evidence of early increased sialylation of airway mucins and defective mucociliary clearance in CFTR-deficient piglets
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Catherine Robbe-Masselot, Mustapha Si-Tahar, Ignacio S. Caballero, Renaud Léonard, Nicolas Pons, Andrea Bähr, Pascal Barbry, Antoine Guillon, Agnès Paquet, Claire Chevaleyre, Nikolai Klymiuk, Isabelle Fleurot, Mustapha Berri, Bélinda Ringot-Destrez, Kevin Lebrigand, Carole Baron, Céline Barc, Reuben Ramphal, Isabelle Lantier, Centre National de la Recherche Scientifique (CNRS), Université Côte d'Azur (UCA), Institut de pharmacologie moléculaire et cellulaire (IPMC), Centre National de la Recherche Scientifique (CNRS)-Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015 - 2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015 - 2019) (COMUE UCA)-Université Côte d'Azur (UCA), Infectiologie et Santé Publique (UMR ISP), Université de Tours (UT)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Unité de Glycobiologie Structurale et Fonctionnelle - UMR 8576 (UGSF), Université de Lille-Centre National de la Recherche Scientifique (CNRS), Centre d’Etude des Pathologies Respiratoires (CEPR), UMR 1100 (CEPR), Université de Tours (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université Nice Sophia Antipolis (1965 - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA), Service de Médecine Intensive et Réanimation [Tours], Plateforme d'Infectiologie Expérimentale (PFIE), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Ludwig Maximilian University [Munich] (LMU), Association Vaincre la Mucoviscidose (Grant No. RF20150 501357), Association Grégory Lemarchal (Grant No. RIF20160501690), Fondation pour la Recherche Médicale (DEQ20180339158), ANR-11-LABX-0028,SIGNALIFE,Réseau d'Innovation sur les Voies de Signalisation en Sciences de la Vie(2011), ANR-10-INBS-0009,France-Génomique,Organisation et montée en puissance d'une Infrastructure Nationale de Génomique(2010), Chanteloup, Nathalie Katy, Centres d'excellences - Réseau d'Innovation sur les Voies de Signalisation en Sciences de la Vie - - SIGNALIFE2011 - ANR-11-LABX-0028 - LABX - VALID, Organisation et montée en puissance d'une Infrastructure Nationale de Génomique - - France-Génomique2010 - ANR-10-INBS-0009 - INBS - VALID, Université de Tours (UT), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA), Centre Hospitalier Régional Universitaire de Tours (CHRU Tours), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Tours (UT), Unité de Glycobiologie Structurale et Fonctionnelle (UGSF), Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Gene Center and Center for Innovation Medical Models (CiMM), Ludwig Maximilians University of Munich, Université de Tours-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Université de Tours-Institut National de la Santé et de la Recherche Médicale (INSERM), and Centre Hospitalier Régional Universitaire de Tours (CHRU TOURS)
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0301 basic medicine ,Pulmonary and Respiratory Medicine ,Male ,Glycosylation ,Mucociliary clearance ,Swine ,[SDV]Life Sciences [q-bio] ,Sus scrofa ,Cystic Fibrosis Transmembrane Conductance Regulator ,Context (language use) ,Inflammation ,Respiratory Mucosa ,Mucociliary transport ,medicine.disease_cause ,Cystic fibrosis ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,Medicine ,Animals ,CFTR ,ComputingMilieux_MISCELLANEOUS ,Lung ,medicine.diagnostic_test ,business.industry ,Pseudomonas aeruginosa ,Mucin ,Mucins ,respiratory system ,medicine.disease ,3. Good health ,respiratory tract diseases ,Trachea ,[SDV] Life Sciences [q-bio] ,Mucin glycosylation ,030104 developmental biology ,medicine.anatomical_structure ,Bronchoalveolar lavage ,030228 respiratory system ,Animals, Newborn ,Mucociliary Clearance ,Pediatrics, Perinatology and Child Health ,Female ,medicine.symptom ,MESH: CFTR ,business - Abstract
International audience; Background: Bacterial colonization in cystic fibrosis (CF) lungs has been directly associated to the loss of CFTR function, and/or secondarily linked to repetitive cycles of chronic inflammation/infection. We hypothesized that altered molecular properties of mucins could contribute to this process.Methods: Newborn CFTR+/+ and CFTR-/- were sacrificed before and 6 h after inoculation with luminescent Pseudomonas aeruginosa into the tracheal carina. Tracheal mucosa and the bronchoalveolar lavage (BAL) fluid were collected to determine the level of mucin O-glycosylation, bacteria binding to mucins and the airways transcriptome. Disturbances in mucociliary transport were determined by ex-vivo imaging of luminescent Pseudomonas aeruginosa.Results: We provide evidence of an increased sialylation of CF airway mucins and impaired mucociliary transport that occur before the onset of inflammation. Hypersialylation of mucins was reproduced on tracheal explants from non CF animals treated with GlyH101, an inhibitor of CFTR channel activity, indicating a causal relationship between the absence of CFTR expression and the sialylation of mucins. This increased sialylation was correlated to an increased adherence of P. aeruginosa to mucins. In vivo infection of newborn CF piglets by live luminescent P. aeruginosa demonstrated an impairment of mucociliary transport of this bacterium, with no evidence of pre-existing inflammation.Conclusions: Our results document for the first time in a well-defined CF animal model modifications that affect the O-glycan chains of mucins. These alterations precede infection and inflammation of airway tissues, and provide a favorable context for microbial development in CF lung that hallmarks this disease.
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- 2020
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12. TLR4 is involved in mediating fatal murine pneumonia due to Burkholderia cenocepacia
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Michel Chignard, Reuben Ramphal, Viviane Balloy, Heidi Nagel, and Mustapha Si-Tahar
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Innate immune system ,Burkholderia cenocepacia ,biology ,medicine.medical_treatment ,Inflammation ,biology.organism_classification ,Pathogenesis ,Cytokine ,TLR5 ,Immunology ,medicine ,TLR4 ,medicine.symptom ,Pathogen - Abstract
Background: We previously showed that MyD88 knocked out mice were protected from death due to B. cenocepacia pneumonia implying that a toll-like receptor(s) (TLR) was involved in mediating death. The aim of the present study was to determine which TLR(s) was involved in triggering the inflammatory response responsible for the pathogenesis. We specifically focus on the TLRs 4 and 5, as these two receptors are the main ones involved in the recognition of P. aeruginosa, a flagellated Gram-bacterium similar to B. cenocepacia. Methods: Mice were infected intratracheally with a suspension of B. ceno-cepacia. Animals were then observed daily for signs of morbidity. Alternatively, bronchoalveolar lavages (BAL) were collected at different time points to further determine cytokine con-centrations and the number of CFU of B. ceno-cepacia. Results: The data clearly indicate that the innate immune response of the host to B. cenocepacia lung infection was due to TLR4 that senses the pathogen while TLR5 does not do so in vivo. As with the MyD88-/- strain, TLR4-/- mice were protected from death and cytokine and chemokine synthesis to infection were reduced. The only paradoxical observation was the reduced pathogen burden in the case of TLR4-/- mice compared to the enhanced (but transient) pathogen burden observed with MyD88-/- mice, suggesting that another TLR was involved in bacterial clearance. Conclusion: The data clearly demonstrate a deleterious implication of TLR4 in the host to B. cenocepacia lung infection.
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- 2011
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13. Expression of surfactant protein D in human corneal epithelial cells is upregulated byPseudomonas aeruginosa
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Connie Tam, Samuel Hawgood, Minjian Ni, David J. Evans, Amrisha Verma, Reuben Ramphal, and Suzanne M. J. Fleiszig
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Lipopolysaccharides ,Microbiology (medical) ,medicine.medical_treatment ,Immunology ,Ligands ,Microbiology ,Antigen ,medicine ,Humans ,Point Mutation ,Immunology and Allergy ,Secretion ,Interleukin 8 ,Enzyme Inhibitors ,Protein kinase A ,Cell Line, Transformed ,Analysis of Variance ,Antigens, Bacterial ,Innate immune system ,biology ,Interleukin-8 ,Epithelium, Corneal ,Surfactant protein D ,General Medicine ,Pulmonary Surfactant-Associated Protein D ,Up-Regulation ,Cell biology ,Infectious Diseases ,Cytokine ,Gene Expression Regulation ,Pseudomonas aeruginosa ,biology.protein ,Flagellin - Abstract
We reported previously that surfactant protein D (SP-D) was present in human tears and corneal epithelial cells, and that it contributed to tear fluid protection of those cells against Pseudomonas aeruginosa invasion. This suggested a role in ocular innate immunity. Here, we explored the effects of bacterial challenge on SP-D expression by human corneal epithelial cells. Results showed that these cells produced and secreted SP-D constitutively in culture, and that production (mRNA, protein) and secretion of SP-D were upregulated after exposure to heat-killed P. aeruginosa or to purified flagellin or lipopolysaccharide. To begin exploring the mechanism for flagellin-mediated SP-D induction, cells were exposed to purified flagellin or flagellin mutated in the TLR-5-binding domain (L94A, L88A) which reduces IL-8 secretion by A549 respiratory cells. Mutated flagellin did not upregulate IL-8 expression in corneal epithelial cells, but did induce SP-D responses. Mitogen-activated protein kinase inhibitors, especially the JNK inhibitor SP600125, reduced secretion of SP-D, but not production, in the presence of P. aeruginosa. These data show that while SP-D and IL-8 corneal responses are each induced by P. aeruginosa or its antigens, they can involve different regions of the same ligand. The data suggest that separate mechanisms may regulate SP-D secretion and production by human corneal epithelia.
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- 2008
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14. Critical role for Ipaf inPseudomonas aeruginosa-induced caspase-1 activation
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Thirumala-Devi Kanneganti, Reuben Ramphal, Amrisha Verma, Gabriel Núñez, Joshua S. Stoolman, and Luigi Franchi
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Host–pathogen interaction ,Immunoblotting ,Interleukin-1beta ,Immunology ,medicine.disease_cause ,Microbiology ,Mice ,NLRC4 ,Macrophages, Alveolar ,medicine ,Animals ,Immunology and Allergy ,Pseudomonas Infections ,Secretion ,Mice, Knockout ,Innate immune system ,biology ,Pseudomonas aeruginosa ,Effector ,Calcium-Binding Proteins ,Caspase 1 ,CARD Signaling Adaptor Proteins ,Enzyme Activation ,Cytoskeletal Proteins ,Toll-Like Receptor 5 ,TLR5 ,biology.protein ,Apoptosis Regulatory Proteins ,Flagellin - Abstract
Pseudomonas aeruginosa is an opportunistic Gram-negative human pathogen that is responsible for a broad range of infections in individuals with a variety of predisposing conditions. After infection, P. aeruginosa induces a marked inflammatory response in the host. However the mechanisms involved in bacterium recognition and induction of immune responses are poorly understood. Here we report that the Nod-like receptor family member Ipaf is required for optimal bacterial clearance in an in vivo model of P. aeruginosa lung infection. Further analysis showed that bacterial flagellin was essential for caspase-1 and IL-1beta and this activity depended on Ipaf and the adaptor ASC but not TLR5. Notably, P. aeruginosa induced macrophage cell death and this event relied on flagellin and Ipaf but not on ASC. Analysis of Pseudomonas mutants revealed that different amino acid residues of flagellin were critical for sensing by Ipaf and TLR5. Finally, activation of caspase-1 and IL-1beta secretion by P. aeruginosa required a functional type III secretion system, but not the effector molecules ExoS, ExoT and ExoY. These results provide new insight into the interaction of P. aeruginosa with host macrophages and suggest that distinct regions of flagellin are sensed by Ipaf and TLR5.
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- 2007
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15. MyD88-dependent expansion of an immature GR-1+CD11b+ population induces T cell suppression and Th2 polarization in sepsis
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Chun-Shiang Chung, Lyle L. Moldawer, Michael J. Clare-Salzler, Drake LaFace, Reuben Ramphal, Philip O. Scumpia, Ryan Swan, Jason S. Weinstein, James L. Wynn, Kindra M. Kelly-Scumpia, Paul G. Heyworth, Dominique Coco, Srinivas Nagaraj, Joseph S. Phillips, Svetlana Antonenko, Mark A. Atkinson, Wesley H. Reeves, Dmitry I. Gabrilovich, Alfred Ayala, Samer Z. Al-Quran, Kerri A. O’Malley, and Matthew J. Delano
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Lymphoid Tissue ,medicine.medical_treatment ,T cell ,Immunology ,Biology ,Inbred C57BL ,Medical and Health Sciences ,Article ,Immune tolerance ,Colony-Forming Units Assay ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Immune system ,Th2 Cells ,Sepsis ,Receptors ,medicine ,Immune Tolerance ,Immunology and Allergy ,Animals ,Antigens ,Progenitor cell ,Myeloid Progenitor Cells ,030304 developmental biology ,Cell Proliferation ,0303 health sciences ,CD11b Antigen ,CD11b ,Inflammatory and immune system ,Hematology ,Articles ,Acquired immune system ,Flow Cytometry ,Molecular biology ,Mice, Inbred C57BL ,Interleukin 10 ,Cytokine ,medicine.anatomical_structure ,Infectious Diseases ,Chemokine ,Myeloid Differentiation Factor 88 ,Cytokines ,Receptors, Chemokine ,CD8 ,030215 immunology ,Signal Transduction - Abstract
Polymicrobial sepsis alters the adaptive immune response and induces T cell suppression and Th2 immune polarization. We identify a GR-1(+)CD11b(+) population whose numbers dramatically increase and remain elevated in the spleen, lymph nodes, and bone marrow during polymicrobial sepsis. Phenotypically, these cells are heterogeneous, immature, predominantly myeloid progenitors that express interleukin 10 and several other cytokines and chemokines. Splenic GR-1(+) cells effectively suppress antigen-specific CD8(+) T cell interferon (IFN) gamma production but only modestly suppress antigen-specific and nonspecific CD4(+) T cell proliferation. GR-1(+) cell depletion in vivo prevents both the sepsis-induced augmentation of Th2 cell-dependent and depression of Th1 cell-dependent antibody production. Signaling through MyD88, but not Toll-like receptor 4, TIR domain-containing adaptor-inducing IFN-beta, or the IFN-alpha/beta receptor, is required for complete GR-1(+)CD11b(+) expansion. GR-1(+)CD11b(+) cells contribute to sepsis-induced T cell suppression and preferential Th2 polarization.
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- 2007
16. Genetic mechanisms involved in the repression of flagellar assembly by Pseudomonas aeruginosa in human mucus
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Avinash Sonawane, Weihui Wu, Reuben Ramphal, and Jeevan Jyot
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Operon ,Proteolysis ,Transposases ,Sigma Factor ,Biology ,Flagellum ,Microbiology ,Bacterial Proteins ,medicine ,Humans ,Promoter Regions, Genetic ,Molecular Biology ,Psychological repression ,Derepression ,medicine.diagnostic_test ,Genetic Complementation Test ,Gene Expression Regulation, Bacterial ,Mucus ,Up-Regulation ,Flagella ,Neutrophil elastase ,Mutation ,Pseudomonas aeruginosa ,DNA Transposable Elements ,biology.protein ,bacteria ,Leukocyte Elastase ,Flagellin - Abstract
Pseudomonas aeruginosa downregulates flagellin transcription when it is grown in purulent mucus from patients with cystic fibrosis (CF) and non-CF bronchiectasis. This response possibly abrogates the potent inflammatory response mediated by the interaction of flagellin with Toll-like receptor 5. The molecular mechanisms involved are thus far unknown. Known flagellar transcriptional regulators were not involved, thus Tn5 mutagenesis was used to ascertain whether novel regulators existed. Five clones with independent Tn5 insertions in flgM showed derepression of flagellin synthesis, suggesting that FlgM was involved in this phenomenon. Furthermore, examination of mucus-grown bacteria showed FlgM accumulation and overexpression of fliA in mucus-grown bacteria reversed the repression of flagellin synthesis. A related study from our laboratory had identified neutrophil elastase in mucus as the molecule responsible for fliC repression, therefore we examined whether loss of the flagellar hook (FlgE), by proteolysis was involved, because the flagellar hook is required for FlgM export. Western immunoblot of membranes from mucus-grown bacteria showed the absence of FlgE, despite the fact that the protein is made and the operon encoding FlgE is upregulated in mucus. A model is proposed wherein neutrophil elastase in mucus proteolytically cleaves the flagellar hook, thus completion of the hook basal body is never sensed, resulting in FlgM accumulation within the cell, causing repression of flagellin synthesis. We speculate that the cyclical bouts of inflammation observed in CF patients may result from flagellin synthesis and its repression, caused by presence of neutrophils at the site of infection.
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- 2006
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17. Glycosylation of b-Type Flagellin of Pseudomonas aeruginosa : Structural and Genetic Basis
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Michael Schirm, Pierre Thibault, Shiwani K. Arora, Amrisha Verma, Susan M. Logan, and Reuben Ramphal
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Glycan ,Glycosylation ,Mutant ,Locus (genetics) ,Microbiology ,Microbial Cell Biology ,Serine ,Open Reading Frames ,chemistry.chemical_compound ,Polysaccharides ,Molecular Biology ,Gene ,biology ,Molecular biology ,Molecular Weight ,Open reading frame ,Biochemistry ,chemistry ,Pseudomonas aeruginosa ,biology.protein ,bacteria ,Protein Processing, Post-Translational ,Flagellin - Abstract
The flagellin of Pseudomonas aeruginosa can be classified into two major types—a-type or b-type—which can be distinguished on the basis of molecular weight and reactivity with type-specific antisera. Flagellin from the a-type strain PAK was shown to be glycosylated with a heterogeneous O-linked glycan attached to Thr189 and Ser260. Here we show that b-type flagellin from strain PAO1 is also posttranslationally modified with an excess mass of up to 700 Da, which cannot be explained through phosphorylation. Two serine residues at positions 191 and 195 were found to be modified. Each site had a deoxyhexose to which is linked a unique modification of 209 Da containing a phosphate moiety. In comparison to strain PAK, which has an extensive flagellar glycosylation island of 14 genes in its genome, the equivalent locus in PAO1 comprises of only four genes. PCR analysis and sequence information suggested that there are few or no polymorphisms among the islands of the b-type strains. Mutations were made in each of the genes, PA1088 to PA1091, and the flagellin from these isogenic mutants was examined by mass spectrometry to determine whether they were involved in posttranslational modification of the type-b flagellin. While mutation of PA1088, PA1089, and PA1090 genes altered the composition of the flagellin glycan, only unmodified flagellin was produced by the PA1091 mutant strain. There were no changes in motility or lipopolysaccharide banding in the mutants, implying a role that is limited to glycosylation.
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- 2006
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18. Measuring Quality Metrics to Identify and Monitor Antimicrobial Stewardship Program Quality Improvement Efforts
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Hassan M. Alnuaimat, Samuel J. Borgert, Reuben Ramphal, Nicole T. Reardon, Kenneth P. Klinker, and David J. Guervil
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0301 basic medicine ,Microbiology (medical) ,medicine.medical_specialty ,Quality management ,Epidemiology ,media_common.quotation_subject ,Advisory Committees ,030106 microbiology ,03 medical and health sciences ,0302 clinical medicine ,Anti-Infective Agents ,Health care ,Humans ,Medicine ,Antimicrobial stewardship ,Infection control ,Quality (business) ,030212 general & internal medicine ,Hospital epidemiology ,Quality Indicators, Health Care ,media_common ,business.industry ,Drug Resistance, Microbial ,Program quality ,Infectious Diseases ,Family medicine ,business - Abstract
Quality Improvement Efforts Author(s): David J. Guervil, PharmD; Kenneth P. Klinker, PharmD; Nicole T. Reardon, PharmD, BCPS; Hassan M. Alnuaimat, MD; Samuel J. Borgert, PharmD; Reuben Ramphal, MD Source: Infection Control and Hospital Epidemiology, Vol. 35, No. 1 (January 2014), pp. 101103 Published by: The University of Chicago Press on behalf of The Society for Healthcare Epidemiology of America Stable URL: http://www.jstor.org/stable/10.1086/674403 . Accessed: 07/01/2014 16:28
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- 2014
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19. TLRs 2 and 4 Are Not Involved in Hypersusceptibility to Acute Pseudomonas aeruginosa Lung Infections
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Michel Huerre, Reuben Ramphal, Michel Chignard, Mustapha Si-Tahar, and Viviane Balloy
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Lipopolysaccharides ,Lung Diseases ,Male ,Virulence Factors ,Immunology ,Mutant ,Virulence ,medicine.disease_cause ,Virulence factor ,Microbiology ,Mice ,Granulocyte Colony-Stimulating Factor ,medicine ,Animals ,Immunology and Allergy ,Pseudomonas Infections ,Mice, Knockout ,biology ,Interleukin-6 ,Pseudomonas aeruginosa ,Pseudomonas ,biology.organism_classification ,medicine.disease ,Immunity, Innate ,Toll-Like Receptor 2 ,Toll-Like Receptor 4 ,Pneumonia ,TLR2 ,Acute Disease ,TLR4 ,Disease Susceptibility - Abstract
TLRs are implicated in defense against microorganisms. Animal models have demonstrated that the susceptibility to a number of Gram-negative pathogens is linked to TLR4, and thus LPS of many Gram-negative bacteria have been implicated as virulence factors. To assess the role of this pathogen-associated molecular pattern as it is exposed on intact Pseudomonas aeruginosa, the susceptibility of mice lacking TLR4 or both TLR2 and TLR4 was examined in a model of acute Pseudomonas pneumonia. These mutant mice were not hypersusceptible to the Pseudomonas challenge and mounted an effective innate response that cleared the organism despite low levels of TNF-α and KC in the airways. Bacterial and neutrophil counts in the lung were similar in control and TLR-deficient mice at 6 and 24 h after infection. MyD88−/− mice were, however, hypersusceptible, with 100% of mice dying within 48 h with a lower dose of P. aeruginosa. Of note there were normal levels of IL-6 and G-CSF in the airways of TLR mutant mice that were absent from the MyD88−/− mice. Thus, the susceptibility of mice to P. aeruginosa acute lung infection does not go through TLR2 or TLR4, implying that Pseudomonas LPS is not the most important virulence factor in acute pneumonia caused by this organism. Furthermore, G-CSF treatment of infected MyD88−/− mice results in improved clearance and survival. Thus, the resistance to infection in TLR2/TLR4−/− mice may be linked to G-CSF and possibly IL-6 production.
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- 2005
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20. Importance of Adequate Initial Antimicrobial Therapy
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Reuben Ramphal
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medicine.medical_specialty ,medicine.drug_class ,Treatment outcome ,Antibiotics ,MEDLINE ,Bacteremia ,Serious infection ,Drug resistance ,Drug Administration Schedule ,Antibiotic therapy ,Drug Resistance, Bacterial ,Drug Discovery ,medicine ,Humans ,Pharmacology (medical) ,Intensive care medicine ,Antibacterial agent ,Pharmacology ,business.industry ,General Medicine ,Antimicrobial ,humanities ,Anti-Bacterial Agents ,Treatment Outcome ,Infectious Diseases ,Oncology ,business - Abstract
Background: It has become an article of faith that appropriate antibiotic therapy is needed for best outcomes during a serious infection. Despite this long-held view, there is some debate about the role of appropriate outcome in serious infections, in particular with nosocomial pneumonia. Therefore, more recent data on adequacy of antibiotic therapy and outcomes were reviewed. Methods: The medical literature from 1997 to 2004 was surveyed for articles that directly dealt with appropriate therapy. Search terms included ‘appropriate and inappropriate antibiotic therapy’, ‘adequate antibiotic therapy’, ‘resistance and antibiotic failures’ and ‘delayed therapy’. The data were abstracted to obtain their essential findings. Results: In bacteremia, data are most persuasive that appropriate and timely therapy significantly influences outcomes. Areas where this may not be the case are studies where coagulase-negative staphylococci are isolated in large numbers or in studies where the incidence of appropriate therapy is high. One area where data are not conclusive concerns the treatment of enteric bacteria carrying extended spectrum betalactamases, where the only cephalosporin of concern is ceftazidime. There is not enough data to compare carbapenems with specific cephalosporins to conclude that these are the most appropriate agents. The studies in regard to nosocomial pneumonias are not as conclusive as those with bacteremias. There appears to be a subset of patients that do not respond to therapy or do not survive, which confounds studies of this population; however, most studies favor a role of appropriate therapy. Conclusions: Appropriate antibiotic therapy has several dimensions. It improves outcomes in most serious diseases. Timing of administration and appropriateness, based on susceptibility, are the most important determinants, but dosing intervals and dose probably play similarly important roles in outcomes that have not been examined exhaustively in humans. Other aspects of appropriate therapy that deserve attention include a shift to more ‘resistance’-proof antibiotics in empiric therapy, which may be accompanied by better outcomes.
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- 2005
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21. Basic Research Funding by Philanthropic Organizations: A Case in Point
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Reuben Ramphal and Michel Chignard
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Pulmonary and Respiratory Medicine ,Cystic Fibrosis ,Point (typography) ,business.industry ,Fund Raising ,Quinolones ,Public relations ,Aminophenols ,Critical Care and Intensive Care Medicine ,Translational Research, Biomedical ,Basic research ,Research Support as Topic ,Humans ,Medicine ,Private Sector ,Molecular Targeted Therapy ,Patient Participation ,business - Published
- 2013
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22. Structural and Genetic Characterization of Glycosylation of Type a Flagellin in Pseudomonas aeruginosa
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Susan M. Logan, Shiwani K. Arora, Amrisha Verma, Reuben Ramphal, Michael Schirm, Pierre Thibault, and Evgeny Vinogradov
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Glycan ,Glycosylation ,biology ,Rhamnose ,macromolecular substances ,Microbiology ,carbohydrates (lipids) ,chemistry.chemical_compound ,Residue (chemistry) ,chemistry ,Biochemistry ,Gene cluster ,biology.protein ,Glycosyl ,Molecular Biology ,Peptide sequence ,Flagellin - Abstract
Type a flagellins from two strains of Pseudomonas aeruginosa , strains PAK and JJ692, were found to be glycosylated with unique glycan structures. In both cases, two sites of O-linked glycosylation were identified on each monomer, and these sites were localized to the central, surface-exposed domain of the monomer in the assembled filament. The PAK flagellin was modified with a heterogeneous glycan comprising up to 11 monosaccharide units that were O linked through a rhamnose residue to the protein backbone. The flagellin of JJ692 was less complex and had a single rhamnose substitution at each site. The role of the glycosylation island gene cluster in the production of each of these glycosyl moieties was investigated. These studies revealed that the orfA and orfN genes were required for attachment of the heterologous glycan and the proximal rhamnose residue, respectively.
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- 2004
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23. Pseudomonas aeruginosaregulates flagellin expression as part of a global response to airway fluid from cystic fibrosis patients
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Andrew L. Goodman, Matthew C. Wolfgang, Reuben Ramphal, Stephen Lory, and Jeevan Jyot
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Cystic Fibrosis ,Phagocytosis ,Inflammation ,Biology ,medicine.disease_cause ,Cystic fibrosis ,Microbiology ,medicine ,Humans ,Pseudomonas Infections ,Psychological repression ,Multidisciplinary ,Lung ,Reverse Transcriptase Polymerase Chain Reaction ,Pseudomonas aeruginosa ,Gene Expression Profiling ,Pattern recognition receptor ,Nucleic Acid Hybridization ,Biological Sciences ,medicine.disease ,Trachea ,Microscopy, Electron ,medicine.anatomical_structure ,Immunology ,biology.protein ,medicine.symptom ,Flagellin - Abstract
Cystic fibrosis (CF) patients are highly susceptible to chronic lung infections by the environmental bacteriumPseudomonas aeruginosa. The overproduction and accumulation of dehydrated viscous respiratory mucus and excessive inflammation represents a defining feature of CF and constitutes the major environment encountered byP. aeruginosaduring chronic infections. We applied whole-genome microarray technology to investigate the ability ofP. aeruginosato respond to signals found in muco-purulent airway liquids collected from chronically infected CF patients. Particularly notable was the activation of the Rhl-dependent quorum-sensing (QS) network and repression offliC, which encodes flagellin. Activation of the Rhl branch of the QS network supports the observation that QS molecules are produced in the chronically infected CF lung. The shut-off of flagellin synthesis in response to CF airway liquids was rapid and independent of QS and the known regulatory networks controlling the hierarchical expression of flagellar genes. As flagellin is highly immunogenic and subject to detection by host pattern recognition receptors, its repression may represent an adaptive response that allowsP. aeruginosato avoid detection by host defense mechanisms and phagocytosis during the chronic phase of CF lung infections.
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- 2004
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24. A four‐tiered transcriptional regulatory circuit controls flagellar biogenesis in Pseudomonas aeruginosa
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Andrew L. Goodman, Nandini Dasgupta, Shiwani K. Arora, Jeevan Jyot, Stephen Lory, Matthew C. Wolfgang, and Reuben Ramphal
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Transcription, Genetic ,Molecular Sequence Data ,Sigma Factor ,Flagellum ,Biology ,Regulon ,Microbiology ,Bacterial Proteins ,Sigma factor ,Gene Order ,Transcriptional regulation ,Molecular Biology ,Gene ,Regulation of gene expression ,Genetics ,Base Sequence ,Gene Expression Profiling ,DNA-Directed RNA Polymerases ,Gene Expression Regulation, Bacterial ,DNA-Binding Proteins ,Response regulator ,Flagella ,Genes, Bacterial ,Pseudomonas aeruginosa ,Trans-Activators ,bacteria ,rpoN ,RNA Polymerase Sigma 54 ,Transcription Factors - Abstract
The single polar flagellum of Pseudomonas aeruginosa is an important virulence and colonization factor of this opportunistic pathogen. In this study, the annotation of the genes belonging to the fla regulon was updated and their organization was analysed in strains PAK and PAO1, representative type-a and type-b strains of P. aeruginosa respectively. The flagellar genes are clustered in three non-contiguous regions of the chromosome. A polymorphic locus flanked by flgJ and fleQ in Region I contains a glycosylation island in PAK. The expression and ordered assembly of the complex multicomponent flagellum is intricately regulated. Dedicated flagellar genes fleQ, fleS, fleR, fliA, flgM and fleN encode proteins that participate in the regulation of the flagellar transcriptional circuit. In addition, expression of the flagellum is coordinately regulated with other P. aeruginosa virulence factors by the alternative sigma factor sigma54, encoded by rpoN. In order to gain insight into the hierarchical regulation of flagellar genes, deletion mutations were constructed in fleQ, fleR, fliA and rpoN. The transcriptional impact of these mutations was examined by transcriptional profiling using a P. aeruginosa whole genome microarray. Analysis of the transcriptomes generated for each of these mutants indicates a four-tiered (Classes I-IV) hierarchy of transcriptional regulation. Class I genes are constitutively expressed and include the transcriptional regulator fleQ and the alternative sigma factor fliA (sigma28). Class II genes including fleSR, encoding a two-component regulatory system require FleQ and RpoN (sigma54) for their transcriptional activation. Class III genes are positively regulated by the activated response regulator FleR in concert with RpoN. The transcription of Class IV genes is dependent on the availability of free FliA following the export of the FliA specific antisigma factor FlgM through the basal body rod-hook structure (assembled from Class II and III gene products). Two previously uncharacterized genes, which are coordinately regulated with known flagellar genes have been identified by genome-wide analysis and their role in flagellar biogenesis was analysed.
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- 2003
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25. Computed Tomography (CT) Scanning Facilitates Early Identification of Neonatal Cystic Fibrosis Piglets
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Patricia Berthon, Reuben Ramphal, Joseph Moënne-Loccoz, Andrea Bähr, Pierre Sarradin, François Lecompte, Sylvie Attucci, Ignacio S. Caballero, Mustapha Si-Tahar, Thierry Villemagne, Rémi Delaunay, Nikolai Klymiuk, Mustapha Berri, Antoine Guillon, Céline Barc, Jérémy Pezant, Claire Chevaleyre, Dominique Buzoni-Gatel, Hans Adriaensen, Eckhard Wolf, Centre d’Etude des Pathologies Respiratoires (CEPR), UMR 1100 (CEPR), Université de Tours (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM), Service de réanimation polyvalente, Groupe Hospitalier Paris Saint-Joseph, Infectiologie et Santé Publique (UMR ISP), Institut National de la Recherche Agronomique (INRA)-Université de Tours (UT), Plateforme d'Infectiologie Expérimentale (PFIE), Institut National de la Recherche Agronomique (INRA), Physiologie de la reproduction et des comportements [Nouzilly] (PRC), Institut National de la Recherche Agronomique (INRA)-Institut Français du Cheval et de l'Equitation [Saumur]-Université de Tours (UT)-Centre National de la Recherche Scientifique (CNRS), Plateforme CIRE, Centre Hospitalier Régional Universitaire de Tours (CHRU Tours), Service anesthésie-réanimation, Gene Center and Center for Innovative Medical Models (CIMM), Foundation Vaincre la Mucoviscidose RF20130500925, Region Centre 32000604, Université de Tours-Institut National de la Santé et de la Recherche Médicale (INSERM), Infectiologie Animale et Santé Publique - IASP (Nouzilly, France), Plateforme d'Infectiologie Expérimentale (PFIE - INRA UE 1277), Centre National de la Recherche Scientifique (CNRS)-Université de Tours-Institut Français du Cheval et de l'Equitation [Saumur]-Institut National de la Recherche Agronomique (INRA), Centre Hospitalier Régional Universitaire de Tours (CHRU TOURS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Tours, Institut National de la Recherche Agronomique (INRA)-Université de Tours, Institut National de la Recherche Agronomique (INRA)-Institut Français du Cheval et de l'Equitation [Saumur]-Université de Tours-Centre National de la Recherche Scientifique (CNRS), Groupe Hospitalier Paris Saint-Joseph (hpsj), Institut National de la Recherche Agronomique (INRA)-Institut Français du Cheval et de l'Equitation [Saumur] (IFCE)-Université de Tours (UT)-Centre National de la Recherche Scientifique (CNRS), and ProdInra, Archive Ouverte
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Male ,pig ,Pathology ,Cystic Fibrosis ,Swine ,medicine.medical_treatment ,Cystic Fibrosis Transmembrane Conductance Regulator ,lcsh:Medicine ,Computed tomography ,ileostomy ,Gastroenterology ,Cystic fibrosis ,0302 clinical medicine ,fluids and secretions ,maladie génétique ,lcsh:Science ,fibrose cystique ,0303 health sciences ,Gastrointestinal tract ,Multidisciplinary ,biology ,medicine.diagnostic_test ,sucking pig ,respiratory system ,Cystic fibrosis transmembrane conductance regulator ,3. Good health ,030220 oncology & carcinogenesis ,histopathology ,Female ,porcelet ,Autre (Sciences du Vivant) ,Research Article ,medicine.medical_specialty ,[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT] ,congenital, hereditary, and neonatal diseases and abnormalities ,Genotype ,Meconium Ileus ,ileostomie ,[SDV.IB.MN]Life Sciences [q-bio]/Bioengineering/Nuclear medicine ,[SDV.IB.MN] Life Sciences [q-bio]/Bioengineering/Nuclear medicine ,03 medical and health sciences ,Ileostomy ,tomodensitométrie ,genetic disease ,Intensive care ,Internal medicine ,medicine ,Animals ,porcin ,030304 developmental biology ,[SDV.OT] Life Sciences [q-bio]/Other [q-bio.OT] ,business.industry ,histopathologie ,lcsh:R ,medicine.disease ,digestive system diseases ,Animals, Newborn ,Nuclear medicine ,biology.protein ,Histopathology ,lcsh:Q ,business ,Tomography, X-Ray Computed ,Médecine nucléaire - Abstract
Background Cystic Fibrosis (CF) is the most prevalent autosomal recessive disease in the Caucasian population. A cystic fibrosis transmembrane conductance regulator knockout (CFTR-/-) pig that displays most of the features of the human CF disease has been recently developed. However, CFTR -/- pigs presents a 100% prevalence of meconium ileus that leads to death in the first hours after birth, requiring a rapid diagnosis and surgical intervention to relieve intestinal obstruction. Identification of CFTR -/- piglets is usually performed by PCR genotyping, a procedure that lasts between 4 to 6 h. Here, we aimed to develop a procedure for rapid identification of CFTR -/- piglets that will allow placing them under intensive care soon after birth and immediately proceeding with the surgical correction. Methods and Principal Findings Male and female CFTR +/- pigs were crossed and the progeny was examined by computed tomography (CT) scan to detect the presence of meconium ileus and facilitate a rapid post-natal surgical intervention. Genotype was confirmed by PCR. CT scan presented a 94.4% sensitivity to diagnose CFTR -/- piglets. Diagnosis by CT scan reduced the birth-to-surgery time from a minimum of 10 h down to a minimum of 2.5 h and increased the survival of CFTR -/- piglets to a maximum of 13 days post-surgery as opposed to just 66 h after later surgery. Conclusion CT scan imaging of meconium ileus is an accurate method for rapid identification of CFTR -/- piglets. Early CT detection of meconium ileus may help to extend the lifespan of CFTR -/- piglets and, thus, improve experimental research on CF, still an incurable disease.
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- 2015
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26. High Pyocyanin Production and Non-motility Correlate With Adverse Outcomes in Pseudomonas aeruginosa Bacteremia
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Jeevan Jyot, Asmita Gupte, and Reuben Ramphal
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Pseudomonas aeruginosa ,business.industry ,Adverse outcomes ,Pyocyanine ,Motility ,medicine.disease_cause ,medicine.disease ,Microbiology ,chemistry.chemical_compound ,Infectious Diseases ,Pyocyanin ,Oncology ,chemistry ,Bacteremia ,medicine ,business - Published
- 2015
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27. fleQ , the Gene Encoding the Major Flagellar Regulator of Pseudomonas aeruginosa , Is σ 70 Dependent and Is Downregulated by Vfr, a Homolog of Escherichia coli Cyclic AMP Receptor Protein
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Evan P. Ferrell, Susan E. H. West, Kristen J. Kanack, Reuben Ramphal, and Nandini Dasgupta
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Cyclic AMP Receptor Protein ,Sigma factor ,Activator (genetics) ,Transcription (biology) ,Transcriptional regulation ,Consensus sequence ,Binding site ,Biology ,Molecular Biology ,Microbiology ,Transcription factor ,Molecular biology - Abstract
The flagellar transcriptional regulator FleQ appears to be the highest-level regulator in the hierarchical regulatory cascade of flagellar biogenesis in Pseudomonas aeruginosa . Except for the posttranslational downregulation of FleQ activity by FleN, an antiactivator, not much is known about the regulation of the fleQ gene or its gene product. Some FleQ homologs in other bacterial species either are positively regulated by another regulator (e.g., CtrA, the master regulator regulating FlbD in Caulobacter crescentus ) or are expressed from a σ 70 -dependent promoter (e.g., FlgR of Helicobacter pylori ). In this study we demonstrated that Vfr, an Escherichia coli CRP homolog known to function as an activator for various genes, including lasR , regA , and toxA , in P. aeruginosa , is capable of repressing fleQ transcription by binding to its consensus sequence in the fleQ promoter. In a DNase I footprint assay, purified Vfr protected the sequence 5′-AATTGACTAATCGTTCACATTTG-3′. When this putative Vfr binding site in the fleQ promoter was mutated, Vfr was unable to bind the fleQ promoter fragment and did not repress fleQ transcription effectively. Primer extension analysis of the fleQ transcript revealed two transcriptional start sites, t1 and t2, that map within the Vfr binding site. A putative −10 region (TAAAAT) for the t2 transcript, with a five-of-six match with the E. coli σ 70 binding consensus, overlaps with one end of the Vfr binding site. A 4-bp mutation and an 8-bp mutation in this −10 region markedly reduced the activity of the fleQ promoter. The same mutations led to the disappearance of the 203-nucleotide fleQ transcript in an in vitro transcription assay. Vfr probably represses fleQ transcription by binding to the Vfr binding site in the fleQ promoter and preventing the sigma factor from binding to the −10 region to initiate transcription.
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- 2002
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28. Identification and Functional Characterization of flgM , a Gene Encoding the Anti-Sigma 28 Factor in Pseudomonas aeruginosa
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Anders Frisk, Shiwani K. Arora, Reuben Ramphal, and Jeevan Jyot
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Molecular Sequence Data ,Mutant ,Gene Expression ,lac operon ,Sigma Factor ,Microbiology ,Primer extension ,Bacterial Proteins ,Sigma factor ,Transcription (biology) ,Two-Hybrid System Techniques ,Gene expression ,Gene Regulation ,Amino Acid Sequence ,Promoter Regions, Genetic ,Molecular Biology ,Gene ,Genetics ,Base Sequence ,biology ,Pseudomonas aeruginosa ,biology.protein ,Sequence Alignment ,Flagellin ,Protein Binding - Abstract
We describe here the functional characterization of the putative flgM gene of Pseudomonas aeruginosa . FlgM of P. aeruginosa is most similar to FlgM of Vibrio parahaemolyticus . A conserved region is present in the C-terminal half of the FlgM of P. aeruginosa and in FlgM homologues of other organisms that includes the σ 28 binding domain. A role for the flgM gene of P. aeruginosa in motility was demonstrated by its inactivation. The β-galactosidase activity of a transcriptional fusion of the fliC promoter to lacZ was upregulated in the flgM mutant, suggesting that the activity of FliA, the sigma factor that regulates fliC , was increased. Consistent with these results, an increased amount of flagellin was demonstrated in the flgM mutant of P. aeruginosa strain PAK by Western blot, suggesting that FlgM negatively regulates transcription of fliC by inhibiting the activity of FliA. Direct interaction of the P. aeruginosa FlgM with the alternative sigma factor σ 28 was demonstrated by utilizing the yeast two-hybrid system. Three putative consensus σ 54 recognition sites and one σ 28 site were found in the flgM upstream region. However, analysis of the transcriptional fusion of the flgM promoter to lacZ in different mutant backgrounds showed that the flgM promoter was not entirely dependent on either σ 28 or σ 54 . A transcript was detected by primer extension that was 8 bp downstream of the consensus σ 28 -binding site. Thus, a system for the control of flagellin synthesis by FlgM exists in P. aeruginosa that is different from that in the enteric bacteria and seems to be most similar to that of V. cholerae where both σ 28 -dependent and -independent mechanisms of transcription exist.
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- 2002
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29. Interaction of the Antiactivator FleN with the Transcriptional Activator FleQ Regulates Flagellar Number in Pseudomonas aeruginosa
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Reuben Ramphal and Nandini Dasgupta
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GTP' ,G protein ,C-terminus ,Genetics and Molecular Biology ,Flagellum ,Biology ,Microbiology ,Molecular biology ,DNA-binding protein ,DNA-Binding Proteins ,chemistry.chemical_compound ,Bacterial Proteins ,chemistry ,Flagella ,Two-Hybrid System Techniques ,Enhancer binding ,Mutation ,Pseudomonas aeruginosa ,Trans-Activators ,Molecular Biology ,Gene ,DNA - Abstract
Flagellar number in Pseudomonas aeruginosa is controlled by FleN, a putative ATP/GTP binding protein. Disruption of fleN results in multiflagellation of the otherwise monoflagellate strains PAK and PAO1 and is associated with a chemotactic defect. We propose that flagellar number is maintained by the antiactivator FleN, which downregulates flagellar genes by binding to their transcriptional activator, FleQ, an enhancer binding protein belonging to the NifA subfamily. In this report we demonstrate direct interaction of FleN and FleQ in the yeast two-hybrid system. Mutagenesis of the putative ATP/GTP binding motif in FleN 24K→Q and truncation of FleN at either the N or C terminus abrogates this interaction. FleN does not inhibit the DNA binding ability of FleQ in vitro, thus indicating that it probably utilizes another mechanism(s) to serve as a FleQ antiactivator.
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- 2001
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30. [Untitled]
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Reuben Ramphal and Shiwani K. Arora
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chemistry.chemical_classification ,Pseudomonas aeruginosa ,Mucin ,Cell Biology ,Biology ,medicine.disease ,medicine.disease_cause ,Biochemistry ,Cystic fibrosis ,Microbiology ,Bacterial adhesin ,Antigen ,chemistry ,medicine ,Glycoprotein ,Receptor ,Molecular Biology ,Organism - Abstract
Pseudomonas aeruginosa remains one of the most important bacterial pathogens in lung diseases and especially in Cystic fibrosis. This unusual predilection is best explained by the existence of defects in host defense mechanisms as resulting from the genetic lesion and the presence of a specific colonization niche within the lungs. The niche has been identified as the mucus layer wherein mucin glycoproteins provide a substrate for binding and allows the persistence of this organism in this milieu by a number of possible mechanisms. While this organism is capable of binding to non CF mucins, it is perhaps a combination of factors e.g. increased binding and decreased mucociliary clearance that is responsible for this marked state of colonization in CF. The organism uses chiefly proteins of its flagellar apparatus to initiate this binding and recognizes a variety of oligosaccharides that have been identified in mucins. Among these are both, neutral oligosaccharides and several forms of acidic oligosaccharides derived from the Lewis antigens. There are more than likely a larger repertoire of receptors than those identified and certainly more adhesins present than those currently known. However, the information gathered to date provides an excellent example of the specificity of bacterial interactions with mucins that will certainly be expanded as we study more pulmonary pathogens.
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- 2001
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31. Cost Effectiveness of Cephalosporin Monotherapy and Aminoglycoside/ Ureidopenicillin Combination Therapy
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Reuben Ramphal, Alan Forrest, Joseph A. Paladino, and Debra A. Fong
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medicine.medical_specialty ,Neutropenia ,Fever ,Combination therapy ,medicine.drug_class ,Cost effectiveness ,Cost-Benefit Analysis ,Cefepime ,Cephalosporin ,Ceftazidime ,Penicillins ,Pharmacotherapy ,Internal medicine ,Humans ,Medicine ,Intensive care medicine ,Retrospective Studies ,Pharmacology ,business.industry ,Health Policy ,Aminoglycoside ,Public Health, Environmental and Occupational Health ,Health Care Costs ,medicine.disease ,Cephalosporins ,Aminoglycosides ,Drug Therapy, Combination ,business ,medicine.drug - Abstract
To assess the relative cost effectiveness of cephalosporin monotherapy options and aminoglycoside/ureidopenicillin combination therapy for the treatment of febrile episodes in adult patients with neutropenia.This was a retrospective cost-effectiveness analysis conducted from the institutional perspective.The analysis was based on 741 febrile episodes in adult patients with neutropenia enrolled in 5 randomised trials: 3 comparing monotherapy with ceftazidime or cefepime, and 2 comparing cefepime monotherapy versus aminoglycoside/ureidopenicillin combination therapy. Resource utilisation included costs for study antibacterials, treatment of adverse effects and failures, and hospitalisation. The primary end-point was the overall cost of treatment per patient. Cost-effectiveness ratios were also analysed.No significant differences in clinical success rates were detected. Median per-patient costs in the monotherapy comparisons were $US7849 for cefepime and $US7788 for ceftazidime [1997 values; not significantly different (NS)]. Corresponding costs for the monotherapy versus combination therapy comparisons were $US9780 for cefepime and $US10 159 for gentamicin/ureidopenicillin (NS). Despite a higher acquisition cost for cefepime, there were no statistically significant differences in cost effectiveness compared with either ceftazidime monotherapy or gentamicin/ureidopenicillin combination therapy. Sensitivity analyses revealed that monotherapy can be cost effective compared with combination therapy in many situations.There were no economic differences between the 3 regimens tested. Therefore drug cost should not be a deciding factor when choosing antibacterial therapy for the treatment of febrile episodes in adult patients with neutropenia.
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- 2000
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32. In vitro efficacy of six cephalosporins tested against Enterobacteriaceae isolated at 38 North American medical centres participating in the SENTRY Antimicrobial Surveillance Program, 1997–1998
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Reuben Ramphal, Ronald N. Jones, Daryl J. Hoban, Michael A. Pfaller, and Stephen G. Jenkins
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Microbiology (medical) ,medicine.drug_class ,Cefepime ,medicine.medical_treatment ,Cephalosporin ,Enterobacter ,Microbial Sensitivity Tests ,beta-Lactamases ,Microbiology ,Citrobacter ,Enterobacteriaceae ,Species Specificity ,Escherichia coli ,medicine ,Humans ,Multicenter Studies as Topic ,Pharmacology (medical) ,Serratia marcescens ,Antibacterial agent ,biology ,Broth microdilution ,Drug Resistance, Microbial ,General Medicine ,biology.organism_classification ,Antimicrobial ,Cephalosporins ,Klebsiella pneumoniae ,Infectious Diseases ,Sentry ,North America ,Beta-lactamase ,medicine.drug - Abstract
The SENTRY Antimicrobial Surveillance Program is an ongoing international collaboration that monitors the predominant bacterial and fungal pathogens and antimicrobial susceptibility patterns associated with community-acquired and nosocomial infections. SENTRY data on the current cephalosporin susceptibility patterns (1997–98) of North American isolates of clinically important Enterobacteriaceae were analyzed. Susceptibility to a selection of cephalosporins was assessed at a central laboratory using reference broth microdilution methods and interpretive criteria specified by the National Committee for Clinical Laboratory Standards. The third- and fourth-generation cephalosporins tested demonstrated excellent activity against Escherichia coli and Klebsiella pneumoniae , whereas some of the older agents maintained good efficacy. Extended spectrum β-lactamases were detected in all regions of the United States and Canada (1.8–10.7%). Cefepime was the most active agent tested against pathogens with the potential for enzyme-mediated resistance due to Amp C. The third-generation agents maintained acceptable efficacy against Serratia marcescens , but were less effective against Citrobacter and Enterobacter species. The older cephalosporins were generally inadequate against these pathogens, in contrast to cefepime, which was the widest spectrum cephalosporin overall. Some significant regional variations in spectrum were detected.
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- 2000
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33. In vitro activity of selected cephalosporins and erythromycin against staphylococci and pneumococci isolated at 38 North American medical centers participating in the SENTRY Antimicrobial Surveillance Program, 1997–1998
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Reuben Ramphal, Michael A. Pfaller, Stephen G. Jenkins, Ronald N. Jones, and Daryl J. Hoban
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Coagulase ,Microbiology (medical) ,Cefotaxime ,Staphylococcus ,Cefepime ,Cefazolin ,Ceftazidime ,Microbial Sensitivity Tests ,Penicillins ,Biology ,Pneumococcal Infections ,Microbiology ,medicine ,Humans ,Oxacillin ,Broth microdilution ,General Medicine ,Staphylococcal Infections ,Anti-Bacterial Agents ,Cephalosporins ,Erythromycin ,Penicillin ,Streptococcus pneumoniae ,Infectious Diseases ,Sentry ,North America ,Ceftriaxone ,Sentinel Surveillance ,medicine.drug - Abstract
The SENTRY Antimicrobial Surveillance Program employs a worldwide network of hospitals to monitor the predominant bacterial and fungal pathogens and antimicrobial susceptibility patterns associated with nosocomial and community-acquired bloodstream, respiratory tract, wound, and urinary tract infections. The purpose of this analysis of SENTRY data is to extract information on the current North American susceptibility patterns of pneumococci and oxacillin-susceptible staphylococci from the comprehensive SENTRY program database. Clinical isolates were provided by 30 centers in the United States (grouped into five regions) and eight centers in Canada. Susceptibility testing was performed at a central reference laboratory using broth microdilution methods and interpretive criteria specified by the National Committee for Clinical Laboratory Standards. Of 34 530 North American bacterial isolates tested during 1997 and 1998, 565 (1.6%) were oxacillin-susceptible, coagulase-negative staphylococci (CoNS). Cefazolin, cefepime, and ceftriaxone all had excellent activity against these CoNS (97.3%-99. 3% susceptible), and 90.4% were susceptible to ceftazidime. A total of 4404 isolates (12.8%) were oxacillin-susceptible Staphylococcus aureus. Overall, 98.9% to 99.2% were susceptible to cefazolin, cefepime, and ceftriaxone; ceftazidime did not have acceptable activity against these S. aureus. Streptococcus pneumoniae accounted for 1665 (4.8%) of North American SENTRY isolates. A total of 1212 isolates (72.8%) were fully susceptible to penicillin (MIC/= 0.06 microg/ml), 250 (15%) were penicillin intermediate (MIC 0.12-1 microg/ml), and 203 (12.2%) were penicillin resistant (MIC/= 2 microg/ml). The rate of penicillin susceptibility was highest in Canada, and lowest in the South Central and South East regions of the United States. Cefepime, cefuroxime, ceftazidime, and erythromycin all demonstrated excellent efficacy (94%-99.8% susceptibility) against fully penicillin-susceptible isolates of S. pneumoniae. Among pneumococci with intermediate penicillin resistance, 88% were susceptible to cefepime, 92% to cefotaxime, and only 14% to ceftazidime. None of the antimicrobial agents in this analysis demonstrated adequate activity against fully penicillin-resistant pneumococci. In summary, the fourth-generation cephalosporin, cefepime, demonstrated consistently excellent efficacy against oxacillin-susceptible staphylococci and most pneumococci, and remains an appropriate choice for empiric therapy of serious infections.
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- 2000
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34. Comparison of the activity of two broad-spectrum cephalosporins tested against 2,299 strains of Pseudomonas aeruginosa isolated at 38 North American medical centers participating in the SENTRY antimicrobial surveillance program, 1997–1998
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Reuben Ramphal, Michael A. Pfaller, Ronald N. Jones, and Daryl J. Hoban
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Microbiology (medical) ,Databases, Factual ,medicine.drug_class ,Cefepime ,Cephalosporin ,Ceftazidime ,Microbial Sensitivity Tests ,medicine.disease_cause ,Microbiology ,medicine ,Humans ,Antibacterial agent ,Cross Infection ,Cephalosporin Resistance ,Pseudomonas aeruginosa ,business.industry ,Broth microdilution ,General Medicine ,Antimicrobial ,Cephalosporins ,Infectious Diseases ,Sentry ,North America ,business ,medicine.drug - Abstract
Pseudomonas aeruginosa is an important nosocomial pathogen. Resistance to certain beta-lactam antimicrobial agents among P. aeruginosa is increasing. The SENTRY Antimicrobial Surveillance Program was designed to employ a network of hospitals in the United States, Canada, Latin America, and Europe to monitor the predominant bacterial and fungal pathogens and antimicrobial susceptibility patterns associated with community-acquired and nosocomial bloodstream, respiratory tract, wound, and urinary tract infections. The purpose of this analysis of SENTRY results was to extract information on the current North American susceptibility pattern of P. aeruginosa for two antipseudomonal cephalosporins, ceftazidime, and cefepime. Clinical isolates were provided by 30 centers in the United States (grouped into five regions) and eight centers in Canada. Susceptibility testing was performed at a central reference laboratory by using broth microdilution methods and interpretive criteria specified by the National Committee for Clinical Laboratory Standards. Of the 34, 530 North American bacterial isolates tested during 1997 and 1998, 2299 (6.7%) were P. aeruginosa. There were no substantial differences in regional rates of P. aeruginosa susceptibility to ceftazidime (range 78.8-81.9%) or cefepime (range 80.0-83.4%) The percentage of resistant isolates among the 1784 United States isolates was 13.3% for ceftazidime versus 7.1% for cefepime (p0.05). It is essential to continue surveillance of the in vitro efficacy of these and other beta-lactam agents against P. aeruginosa because of the clinical importance of these safe and broad-spectrum cephems used alone or in combination in current clinical practice.
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- 2000
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35. fleN , a Gene That Regulates Flagellar Number in Pseudomonas aeruginosa
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Reuben Ramphal, Nandini Dasgupta, and Shiwani K. Arora
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Base Sequence ,Pseudomonas aeruginosa ,Operon ,Molecular Sequence Data ,Mutant ,Wild type ,Genetics and Molecular Biology ,Flagellum ,Biology ,medicine.disease_cause ,Microbiology ,Microscopy, Electron ,Open reading frame ,Plasmid ,Bacterial Proteins ,Flagella ,Trans-Activators ,medicine ,Amino Acid Sequence ,Sequence Alignment ,Molecular Biology ,Gene ,Software - Abstract
The single polar flagellum of Pseudomonas aeruginosa plays an important role in the pathogenesis of infection by this organism. However, regulation of the assembly of this organelle has not been delineated. In analyzing the sequence available at the Pseudomonas genome database, an open reading frame (ORF), flanked by flagellar genes flhF and fliA , that coded for a protein (280 amino acids) with an ATP-binding motif at its N terminus was found. The ORF was inactivated by inserting a gentamicin cassette in P. aeruginosa PAK and PAO1. The resulting mutants were nonmotile on motility agar plates, but under a light microscope they exhibited random movement and tumbling behavior. Electron microscopic studies of the wild-type and mutant strains revealed that the mutants were multiflagellate, with three to six polar flagella per bacterium as rather than one as in the wild type, indicating that this ORF was involved in regulating the number of flagella and chemotactic motility in P. aeruginosa . The ORF was named fleN . An intact copy of fleN on a plasmid complemented the mutant by restoring motility and monoflagellate status. The β-galactosidase activities of eight flagellar operon or gene promoters in the wild-type and fleN mutant strains revealed a direct correlation between six promoters that were upregulated in the fleN mutant ( fliLMNOPQ , flgBCDE , fliEFG , fliDS orf126 , fleSR , and fliC ) and positive regulation by FleQ, an NtrC-like transcriptional regulator for flagellar genes. Based on these results, we propose a model where FleN influences FleQ activity (directly or indirectly) in regulating flagellar number in P. aeruginosa .
- Published
- 2000
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36. Molecular basis of mucin-Pseudomonas interactions
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Reuben Ramphal
- Subjects
biology ,Chemistry ,Mucin ,Pseudomonas ,Mucins ,Oligosaccharides ,Computational biology ,biology.organism_classification ,Biochemistry ,Bacterial Adhesion ,Pseudomonas aeruginosa ,Humans ,Adhesins, Bacterial ,Protein Binding - Published
- 1999
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37. PNEUMONIA IN THE COMPROMISED HOST INCLUDING CANCER PATIENTS AND TRANSPLANT PATIENTS
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Berjan A. Collin and Reuben Ramphal
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Microbiology (medical) ,medicine.medical_specialty ,Neutropenia ,Time Factors ,medicine.medical_treatment ,Virus diseases ,Organ transplantation ,Immunocompromised Host ,Neoplasms ,Parasitic Diseases ,medicine ,Humans ,Intensive care medicine ,Bone Marrow Transplantation ,business.industry ,Cancer ,Immunosuppression ,Bacterial Infections ,Organ Transplantation ,Pneumonia ,medicine.disease ,Infectious Diseases ,Mycoses ,Virus Diseases ,Transplant patient ,business ,Empiric therapy - Abstract
Pneumonia remains a major cause of morbidity and mortality in the immunocompromised host. The type and timing of immunosuppression will predispose the patient to infections with certain pathogens. This article discusses the types of immunosuppression and their infectious and noninfectious implications. Key points of the most commonly involved pathogens are mentioned. Finally, an approach to diagnosis and empiric therapy is discussed.
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- 1998
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38. A transcriptional activator, FleQ, regulates mucin adhesion and flagellar gene expression in Pseudomonas aeruginosa in a cascade manner
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Stephen Lory, Reuben Ramphal, Ernesto C. Almira, Shiwani K. Arora, and Bruce W. Ritchings
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Operon ,Recombinant Fusion Proteins ,Molecular Sequence Data ,Restriction Mapping ,Sigma Factor ,Biology ,Microbiology ,Bacterial Adhesion ,Bacterial Proteins ,Sigma factor ,Transcription (biology) ,Transcriptional regulation ,Amino Acid Sequence ,Promoter Regions, Genetic ,Molecular Biology ,Gene ,Regulation of gene expression ,Genetics ,Base Sequence ,Sequence Homology, Amino Acid ,Mucins ,DNA-Directed RNA Polymerases ,Gene Expression Regulation, Bacterial ,Sequence Analysis, DNA ,DNA-Binding Proteins ,Open reading frame ,Flagella ,Genes, Bacterial ,Pseudomonas aeruginosa ,Trans-Activators ,bacteria ,rpoN ,RNA Polymerase Sigma 54 ,Flagellin ,Transcription Factors ,Research Article - Abstract
Previous work has demonstrated that fleR, the gene for a transcriptional activator belonging to the NtrC subfamily of response regulators, is involved in the regulation of mucin adhesion and flagellar expression by Pseudomonas aeruginosa. This report describes the identification and characterization of fleQ, the gene for another transcriptional regulator which also regulates mucin adhesion and motility in this organism. The complete nucleotide sequence of the fleQ gene was determined on both DNA strands, and an open reading frame (ORF) consisting of 1,493 nucleotides was identified. This ORF coded for a gene product of predicted molecular weight, as confirmed by the overexpression of the fleQ gene as a fusion protein under an inducible promoter. The fleQ gene is flanked by a flagellar operon, fliDSorf126, at the 5' end and the fleSR operon on the 3' end. FleQ also had striking homology to a number of proteins belonging to the NtrC subfamily of response regulators, which work in concert with the alternate sigma factor RpoN (sigma54) to activate transcription. However, FleQ lacks the residues corresponding to Asp-54 and Lys-104 of the NtrC protein which are conserved in most of the members belonging to this subfamily of regulators. In addition, unlike some of the other transcriptional activators of this group, FleQ does not appear to have a cognate sensor kinase. A chromosomal insertional mutation in the fleQ gene abolished mucin adhesion and motility of P. aeruginosa PAK and PAK-NP. Both of these functions were regained by providing the complete fleQ gene on a multicopy plasmid. The location of fleQ immediately upstream of the fleSR operon, which is also necessary for the same process, suggested that these regulators may interact in some way. We therefore examined the regulation of the fleSR operon by fleQ and vice versa. Promoter fusion experiments showed that the fleSR operon was regulated by RpoN and FleQ. On the other hand, the fleQ promoter was independent of RpoN and FleR. FleQ, thus, adds another level of regulation to motility and adhesion in P. aeruginosa, above that of fleSR. We therefore propose the existence of a regulatory cascade which consists of at least two transcriptional regulators, FleQ and FleR, in the control of motility and adhesion in P. aeruginosa.
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- 1997
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39. Gelsolin Activates DNase Iin Vitroand in Cystic Fibrosis Sputum
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Kiarash Davoodian, Bruce W. Ritchings, Reuben Ramphal, and Michael R. Bubb
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Cystic Fibrosis ,macromolecular substances ,Biology ,Biochemistry ,Cystic fibrosis ,Fluorescence ,Ethidium ,medicine ,Animals ,Deoxyribonuclease I ,Humans ,Binding site ,Cytoskeleton ,Gelsolin ,Actin ,Electrophoresis, Agar Gel ,Sputum ,musculoskeletal system ,medicine.disease ,Molecular biology ,Actins ,In vitro ,Cell biology ,Enzyme Activation ,Cross-Linking Reagents ,Apoptosis ,Cattle ,Rabbits ,Function (biology) - Abstract
Because actin can form a complex in vitro containing both gelsolin and DNase I, gelsolin and DNase I have been assumed to bind independently to actin. Although this assumption is consistent with the known crystalline structures of gelsolin with one actin and of actin with DNase I, which suggest that the binding sites on actin for both gelsolin and DNase I are distinct and separate, we propose that a second actin binding site on gelsolin competes with DNase I for actin. Since actin is an inhibitor of DNase I, competition at the second binding site results in activation of DNase I by gelsolin. Covalent cross-linking experiments confirm that DNase I prevents dimerization of actin by gelsolin, consistent with displacement of one actin from gelsolin by DNase I. Activation of DNase I by gelsolin is a novel function for a cytoskeletal protein and could have broad implications for biology, such as a role in initiating apoptosis. These results also may explain why both gelsolin and DNase I decrease sputum viscosity in cystic fibrosis (CF). While the activity of DNase I had originally been attributed to fragmentation of DNA, subsequent data suggested that both gelsolin and DNase I may affect viscosity by depolymerizing filamentous actin. The current results alternatively suggest aht dissociation of the actin-DNase I complex by gelsolin in CF sputum results in activation of the nuclease activity of constitutive DNase I. The nuclease activity of DNase I alone is therefore sufficient to explain the effects of both gelsolin and DNase I on CF sputum.
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- 1997
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40. Time to positivity of blood cultures supports antibiotic de-escalation at 48 hours
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Joe Pardo, Kenneth H. Rand, Gaurav Trikha, Samuel J. Borgert, Reuben Ramphal, and Kenneth P. Klinker
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medicine.medical_specialty ,Bacteriological Techniques ,medicine.diagnostic_test ,business.industry ,medicine.drug_class ,Antibiotics ,Bacteremia ,Bacterial Infections ,Antimicrobial ,Anti-Bacterial Agents ,Internal medicine ,medicine ,Antimicrobial stewardship ,Humans ,Pharmacology (medical) ,Blood culture ,Sample collection ,Diagnosis, Computer-Assisted ,Intensive care medicine ,business ,Time to positivity ,Incubation ,De-escalation - Abstract
Background: Appropriate de-escalation of empirical antimicrobial therapy is a fundamental component of antimicrobial stewardship. Concern for the late detection of bloodstream pathogens may undermine early streamlining efforts and subject patients to protracted courses of nonessential therapy. Objective: To quantify the prevalence of bacterial bloodstream infection (BSI) detection after more than 48 hours of culture incubation. We also assessed the impact of antimicrobial therapy delivered prior to blood sample collection. Methods: We retrospectively evaluated time to blood culture positivity (TTP) in adult patients at an academic tertiary care hospital. Microbiology reports were reviewed to identify the TTP for the first positive blood culture bottle for each episode of BSI occurring from February 1, 2011, to July 31, 2011. Isolates were classified as true pathogens or contaminants. Blood culture results after 48 hours of incubation were compared with results after 120 hours of incubation. Results: The median TTP of 416 monomicrobial BSIs and 210 contamination episodes was 13.7 and 24.4 hours, respectively ( P < .001). The median TTPs in those who received and did not receive prior antibiotics were 17.0 and 12.8 hours, respectively ( P < .001). By 48 hours, 98% of aerobic Gram-positive and Gram-negative BSIs were detected. Culture results at 48 hours were 97% sensitive and had a negative predictive value of 99.8%. Conclusion: Few true BSIs are detected after more than 48 hours of culture incubation. Clinicians may adjust empirical antibiotic coverage at this time with little risk for subsequent bacterial pathogen detection.
- Published
- 2013
41. Poly- l -Lysine Compacts DNA, Kills Bacteria, and Improves Protease Inhibition in Cystic Fibrosis Sputum
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Virginie Hervé, Sylvie Attucci, Delphine Gras, Patrick Midoux, Mustapha Si-Tahar, Mustapha-Kamel Khelloufi, Déborah Bréa, Reuben Ramphal, Patrice Diot, Francis Gauthier, Alice V. Dubois, Institut national du sport, de l'expertise et de la performance (INSEP), Centre de biophysique moléculaire (CBM), Université d'Orléans (UO)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC), Unite Mixte de Recherche 1100, Institut National de la Santé et de la Recherche Médicale (INSERM), Pathologies Respiratoires : Protéolyse et Aérosolthérapie, Université de Tours-Institut National de la Santé et de la Recherche Médicale (INSERM), U.F.R. de Médecine, Laboratoire d'Enzymologie et Chimie des Protéines, Université Francois Rabelais [Tours], Centre d'Etude des Pathologies Respiratoires (CEPR), UMR 1100. Equipe 2 'Mécanismes Protéolytiques dans l'Inflammation' (CEPR. Equipe 2), Centre d’Etude des Pathologies Respiratoires (CEPR), UMR 1100 (CEPR), Université de Tours-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Tours-Institut National de la Santé et de la Recherche Médicale (INSERM), Université de Tours (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM), and Université de Tours (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Tours (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM)
- Subjects
Adult ,Male ,Pulmonary and Respiratory Medicine ,Staphylococcus aureus ,Proteases ,Cathepsin G ,Cystic Fibrosis ,Neutrophils ,medicine.medical_treatment ,[SDV]Life Sciences [q-bio] ,Critical Care and Intensive Care Medicine ,Microbiology ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Intensive care ,medicine ,Animals ,Humans ,Protease inhibitor (pharmacology) ,Lung ,Aged ,030304 developmental biology ,Antibacterial agent ,chemistry.chemical_classification ,0303 health sciences ,Protease ,biology ,Lysine ,Sputum ,DNA ,Middle Aged ,Flow Cytometry ,biology.organism_classification ,Anti-Bacterial Agents ,3. Good health ,Disease Models, Animal ,Enzyme ,030228 respiratory system ,Biochemistry ,chemistry ,Proteolysis ,Pseudomonas aeruginosa ,Female ,medicine.symptom ,Leukocyte Elastase ,Bacteria ,Peptide Hydrolases - Abstract
International audience; Neutrophil serine proteases in cystic fibrosis (CF) lung secretions partially resist inhibition by natural and exogenous inhibitors, mostly because DNA impairs their control. Cationic polypeptides display the property of condensing DNA and retain antimicrobial properties. We hypothesized that DNA condensation by cationic polypeptides in CF sputum would result in a better control of CF inflammation and infection.OBJECTIVES:We examined whether poly-L-lysine would compact DNA in CF lung secretions and liquefy CF sputum, improve the control of extracellular proteases by exogenous inhibitors, and whether it displays antibacterial properties toward CF-associated bacteria.METHODS:We used fluorogenic methods to measure proteolytic activities and inhibition by protease inhibitors in whole sputum homogenates from patients with CF before and after treatment with poly-L-lysine. Antibacterial properties of poly-L-lysine were measured in bacterial cultures and in whole CF sputum. Poly-L-lysine toxicity was evaluated after aerosolization by histologic analysis, flow cytometry, and quantification of proinflammatory cytokines.MEASUREMENTS AND MAIN RESULTS:Poly-L-lysine compacts CF sputum DNA, generating a liquid phase that improves ciliary beating frequency at the lung epithelial surface, and allows the control of neutrophil elastase and cathepsin G by their natural inhibitors. It retains antimicrobial properties against Pseudomonas aeruginosa and Staphylococcus aureus at doses that induce no inflammation in the mouse lung after aerosol administration.CONCLUSIONS:Poly-L-lysine may be an alternative to dornase-α to liquefy sputum with added benefits because it helps natural inhibitors to better control the deleterious effects of extracellularly released neutrophil serine proteases and has the ability to kill bacteria in CF sputum.
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- 2013
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42. Isolation and characterization of Pseudomonas aeruginosa genes inducible by respiratory mucus derived from cystic fibrosis patients
- Author
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Reuben Ramphal, Shouguang Jin, Jingyi Wang, and Stephen Lory
- Subjects
DNA, Bacterial ,Cystic Fibrosis ,Molecular Sequence Data ,Respiratory System ,Virulence ,Locus (genetics) ,Biology ,Iron Chelating Agents ,medicine.disease_cause ,Microbiology ,Cystic fibrosis ,Bacterial Proteins ,medicine ,Humans ,Secretion ,Amino Acid Sequence ,Molecular Biology ,Gene ,Base Sequence ,Pseudomonas aeruginosa ,Chromosome Mapping ,Glycosyltransferases ,Promoter ,medicine.disease ,Mucus ,Genes, Bacterial - Abstract
Pseudomonas aeruginosa, an opportunistic human pathogen, is a major causative agent of mortality and morbidity in immunocompromised individuals and those with cystic fibrosis (CF). In CF patients, the secretion of abnormally high amounts of mucus into the airways contributes to their susceptibility to infection by P. aeruginosa. To identify virulence genes of P. aeruginosa that are important in infection of CF patients, an in vivo selection system (IVET) was used to identify promoters that are specifically inducible by respiratory mucus derived from CF patients. Three genetic loci that are highly inducible by the mucus were identified. One of them is a well-characterized virulence gene (fptA), encoding the receptor for pyochelin, which is a P. aeruginosa iron siderophore. Induction of the fptA gene by mucus is suppressed by the addition of exogenous iron, demonstrating that the mucus is an iron chelator and generates an iron-deficient environment in CF lungs. Therefore, as a part of the host-defence mechanism, the mucus could also be responsible for induction of iron-regulated virulence factors of bacterial pathogens. The second locus, np20, encodes a peptide that shares sequence homology to a number of transcriptional regulators. An identical locus was previously identified to be inducible in vivo during infection of mice and was shown to be important in bacterial virulence in a neutropenic-mouse infection model. The third locus, designated migA (mucus inducible gene), was sequenced and found to encode a 299-amino-acid peptide which is homologous to glycosyltransferases of other bacteria, and is involved in the biosynthesis of lipopolysaccharides or exopolysaccharides. Inducibilities of the np20 and migA genes are not affected by iron and the exact nature of the inducing signals in the mucus is not known. The possible implications of the migA inducibility by respiratory mucus is discussed in relation to the P. aeruginosa infection in CF.
- Published
- 1996
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43. Cloning and characterization of Pseudomonas aeruginosa fliF, necessary for flagellar assembly and bacterial adherence to mucin
- Author
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Ernesto C. Almira, Reuben Ramphal, Stephen Lory, Shiwani K. Arora, and Bruce W. Ritchings
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Transposable element ,Molecular Sequence Data ,Immunology ,Mutant ,Sigma Factor ,Biology ,Microbiology ,Bacterial Adhesion ,Homology (biology) ,Bacterial Proteins ,Sigma factor ,Amino Acid Sequence ,Cloning, Molecular ,Promoter Regions, Genetic ,Gene ,Regulator gene ,Base Sequence ,Mucins ,Membrane Proteins ,Molecular biology ,Complementation ,Infectious Diseases ,Genes, Bacterial ,Pseudomonas aeruginosa ,rpoN ,Parasitology ,Research Article - Abstract
Pseudomonas aeruginosa adheres to the mucosal surfaces of the lungs. This process appears to be mediated by nonpilus adhesins which bind to mucin. To find this nonpilus adhesin(s), mutagenesis of a nonpiliated mutant of P. aeruginosa with transposon Tn5G, followed by a screen for mucin adhesion, was used to isolate a series of mutants unable to adhere to mucin. All of these mutants were also found to be defective in motility. One such mutant, PAK-RR20, is characterized here. The site of the transposon insertion in PAK-RR20 was localized to a gene which is homologous to the fliF gene of other organisms and was flanked by other motility-related genes, fliE and fliG. Both adhesion and motility defects in PAK-RR20 were complemented by providing the fliF gene in trans. Since complementation could have been due to the presence of an internal promoter in the fliF gene or in the Tn5G transposon, which allowed the transcription of the downstream genes, another chromosomal mutant of the fliF gene was constructed by insertional inactivation with an antibiotic resistance cassette. This mutant was also nonmotile and nonadhesive. However, the two defects in this new mutant could not be complemented by the fliF gene in trans, consistent with the interpretation that there is no internal fliF promoter but possibly a functional promoter in the Tn5G transposon. The complete nucleotide sequences of the fliE and fliF genes and a partial nucleotide sequence of the fliG gene of P. aeruginosa were determined. Control of the promoter upstream of the fliE gene was analyzed by construction of a fliE-lacZ fusion and the introduction of this construct into strains of P. aeruginosa with mutations in several regulatory genes. Beta-Galactosidase expression measurements indicated that the fliE promoter does not utilize RpoF (sigma(28)) or RpoN (sigma(54)) sigma factors. The characterization of this gene as being responsible for the loss of adhesion indicates that basal body structures are probably important for localization of the adhesin.
- Published
- 1996
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44. Clinical experience with single agent and combination regimens in the management of infection in the febrile neutropenic patient
- Author
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Coleman Rotstein, David J. Oblon, Michael Cimino, Reuben Ramphal, and Rasim Gucalp
- Subjects
Male ,Pediatrics ,medicine.medical_specialty ,Neutropenia ,Fever ,medicine.drug_class ,Cefepime ,Antibiotics ,Ceftazidime ,Penicillins ,Vancomycin ,Neoplasms ,medicine ,Humans ,Prospective Studies ,Piperacillin ,business.industry ,General Medicine ,Middle Aged ,medicine.disease ,Anti-Bacterial Agents ,Cephalosporins ,Regimen ,Superinfection ,Drug Therapy, Combination ,Female ,Gentamicins ,business ,Empiric therapy ,medicine.drug - Abstract
Choice of antibiotic therapy for the management of infection in the neutropenic patient continues to challenge the clinician. The shift toward gram-positive organisms and the continuing need to provide gram-negative coverage demands the use of an agent or agents that provide coverage for the spectrum of potential infecting organisms. Cefepime is an extended-spectrum fourth-generation cephalosporin that has good activity against gram-positive and gram-negative organisms; in addition, it resists degradation by Bush group 1 beta-lactamases. These properties make this agent a promising candidate for empiric therapy with febrile neutropenic patients. Data presented in this article are from febrile neutropenic cancer patients enrolled into two randomized, prospective, nonblinded comparative U.S. clinical trials. Patients were randomized to receive cefepime (2 g thrice daily) or a comparator regimen of either ceftazidime (2 g thrice daily) or piperacillin + gentamicin (3 g every 4 hours + 1.5 mg/kg every 8 hours). When indicated, vancomycin was added to the regimen. A total of 109 febrile episodes were treated with cefepime and 107 episodes were treated with the comparator regimens. Neutropenia (or = 500 PMNs/mm3) persisted foror = 10 days in40% of episodes and severe neutropenia (or = 100 PMNs/mm3) in25%. More than 40% of the total number of episodes were documented bacterial infections. These characteristics did not differ among treatment groups. Duration of therapy was similar in both groups (median: cefepime, 9 days; comparators, 11 days). In40% of episodes, patients received study therapy without addition of other antibacterials (cefepime, 46%; comparators, 41%). Vancomycin was added in almost half of all the episodes (cefepime, 45%; comparators, 53%). Patients became afebrile by the fourth day of study therapy in approximately 60% of episodes (cefepime, 58%; comparators, 60%). In approximately 75% of the episodes, patients had a satisfactory response at the end of therapy (cefepime, 74%; comparators, 76%); and following approximately 90% of episodes, patients survived for30 days (cefepime, 90%; comparators, 92%). Eradication rates were similar for all pathogens for cefepime and comparator agents. There were similar numbers of superinfecting organisms in each treatment arm; most involved gram-positive organisms. These multiple measures of efficacy suggest that initial empiric cefepime monotherapy is comparable to the pooled experience with standard therapies and that antibacterial modifications occur with similar frequency for cefepime compared with standard empiric regimens.
- Published
- 1996
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45. Transcriptional response of mucoid Pseudomonas aeruginosa to human respiratory mucus
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Reuben Ramphal, Damien Roux, Hugues Aschard, Vincent Cattoir, Stephen Lory, David Skurnik, Jeevan Jyot, Giri Narasimhan, Service de Microbiologie [CHU Caen], Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-CHU Caen, Normandie Université (NU)-Tumorothèque de Caen Basse-Normandie (TCBN)-Tumorothèque de Caen Basse-Normandie (TCBN), Ecologie et Evolution des Microorganismes (EEM), Université Paris Diderot - Paris 7 (UPD7)-Université Paris 13 (UP13)-Université Sorbonne Paris Cité (USPC)-Institut National de la Santé et de la Recherche Médicale (INSERM), Harvard School of Public Health, and Institut National de la Santé et de la Recherche Médicale (INSERM)
- Subjects
MESH: Cystic Fibrosis ,Cystic Fibrosis ,Transcription, Genetic ,Population ,Respiratory System ,Virulence ,Biology ,medicine.disease_cause ,Microbiology ,Cystic fibrosis ,03 medical and health sciences ,Bacterial Proteins ,Virology ,MESH: Mucus ,medicine ,Humans ,Pseudomonas Infections ,education ,Pathogen ,MESH: Bacterial Proteins ,MESH: Respiratory System ,030304 developmental biology ,Type VI secretion system ,0303 health sciences ,education.field_of_study ,[STAT.AP]Statistics [stat]/Applications [stat.AP] ,MESH: Humans ,030306 microbiology ,Pseudomonas aeruginosa ,MESH: Transcription, Genetic ,MESH: Pseudomonas Infections ,medicine.disease ,Mucus ,QR1-502 ,medicine.anatomical_structure ,[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics ,MESH: Pseudomonas aeruginosa ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie ,[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM] ,[STAT.ME]Statistics [stat]/Methodology [stat.ME] ,Respiratory tract ,Research Article - Abstract
Adaptation of bacterial pathogens to a host can lead to the selection and accumulation of specific mutations in their genomes with profound effects on the overall physiology and virulence of the organisms. The opportunistic pathogen Pseudomonas aeruginosa is capable of colonizing the respiratory tract of individuals with cystic fibrosis (CF), where it undergoes evolution to optimize survival as a persistent chronic human colonizer. The transcriptome of a host-adapted, alginate-overproducing isolate from a CF patient was determined following growth of the bacteria in the presence of human respiratory mucus. This stable mucoid strain responded to a number of regulatory inputs from the mucus, resulting in an unexpected repression of alginate production. Mucus in the medium also induced the production of catalases and additional peroxide-detoxifying enzymes and caused reorganization of pathways of energy generation. A specific antibacterial type VI secretion system was also induced in mucus-grown cells. Finally, a group of small regulatory RNAs was identified and a fraction of these were mucus regulated. This report provides a snapshot of responses in a pathogen adapted to a human host through assimilation of regulatory signals from tissues, optimizing its long-term survival potential., IMPORTANCE The basis for chronic colonization of patients with cystic fibrosis (CF) by the opportunistic pathogen Pseudomonas aeruginosa continues to represent a challenging problem for basic scientists and clinicians. In this study, the host-adapted, alginate-overproducing Pseudomonas aeruginosa 2192 strain was used to assess the changes in its transcript levels following growth in respiratory CF mucus. Several significant and unexpected discoveries were made: (i) although the alginate overproduction in strain 2192 was caused by a stable mutation, a mucus-derived signal caused reduction in the transcript levels of alginate biosynthetic genes; (ii) mucus activated the expression of the type VI secretion system, a mechanism for killing of other bacteria in a mixed population; (iii) expression of a number of genes involved in respiration was altered; and (iv) several small regulatory RNAs were identified, some being mucus regulated. This work highlights the strong influence of the host environment in shaping bacterial survival strategies.
- Published
- 2012
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46. A crucial role of Flagellin in the induction of airway mucus production by Pseudomonas aeruginosa
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Reuben Ramphal, Lhousseine Touqui, Viviane Balloy, Fatima Ben Mohamed, Mathieu Medina, Michel Chignard, and Ignacio Garcia-Verdugo
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Bacterial Diseases ,Anatomy and Physiology ,Cystic Fibrosis ,Nosocomial Infections ,lcsh:Medicine ,Mucin 2 ,Mucin 5AC ,medicine.disease_cause ,Mice ,Autosomal Recessive ,Immune Physiology ,lcsh:Science ,Multidisciplinary ,respiratory system ,Neuronal Apoptosis-Inhibitory Protein ,Infectious Diseases ,Pseudomonas aeruginosa ,Cytokines ,Medicine ,Female ,Signal Transduction ,Research Article ,Immunology ,Respiratory Mucosa ,Biology ,Microbiology ,Cell Line ,medicine ,Genetics ,Animals ,Humans ,Secretion ,Pseudomonas Infections ,Interleukin 8 ,Clinical Genetics ,Mucin-2 ,Mucin ,lcsh:R ,Interleukin-8 ,Human Genetics ,Mucus ,Toll-Like Receptor 5 ,Gene Expression Regulation ,TLR5 ,Immune System ,biology.protein ,lcsh:Q ,Flagellin - Abstract
Pseudomonas aeruginosa is an opportunistic pathogen involved in nosocomial infections. Flagellin is a P. aeruginosa virulence factor involved in host response to this pathogen. We examined the role of flagellin in P. aeruginosa-induced mucus secretion. Using a mouse model of pulmonary infection we showed that PAK, a wild type strain of P. aeruginosa, induced airway mucus secretion and mucin muc5ac expression at higher levels than its flagellin-deficient mutant (ΔFliC). PAK induced expression of MUC5AC and MUC2 in both human airway epithelial NCI-H292 cell line and in primary epithelial cells. In contrast, ΔFliC infection had lower to no effect on MUC5AC and MUC2 expressions. A purified P. aeruginosa flagellin induced MUC5AC expression in parallel to IL-8 secretion in NCI-H292 cells. Accordingly, ΔFliC mutant stimulated IL-8 secretion at significantly lower levels compared to PAK. Incubation of NCI-H292 cells with exogenous IL-8 induced MUC5AC expression and pre-incubation of these cells with an anti-IL-8 antibody abrogated flagellin-mediated MUC5AC expression. Silencing of TLR5 and Naip, siRNA inhibited both flagellin-induced MUC5AC expression and IL-8 secretion. Finally, inhibition of ERK abolished the expression of both PAK- and flagellin-induced MUC5AC. We conclude that: (i) flagellin is crucial in P. aeruginosa-induced mucus hyper-secretion through TLR5 and Naip pathways; (ii) this process is mediated by ERK and amplified by IL-8. Our findings help understand the mechanisms involved in mucus secretion during pulmonary infectious disease induced by P. aeruginosa, such as in cystic fibrosis.
- Published
- 2012
47. Neutrophil mobilization from the bone marrow during polymicrobial sepsis is dependent on CXCL12 signaling
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Kerri A. O’Malley, Elizabeth A. Warner, Reuben Ramphal, Matthew J. Delano, Paul G. Heyworth, Robert M. Strieter, Clayton E. Mathews, Alex G. Cuenca, Phillips B. Harrington, Sonia Gabrilovich, Philip A. Efron, Robert D. Winfield, Philip O. Scumpia, Drake LaFace, Terri C. Thayer, Lyle L. Moldawer, and Kindra M. Kelly-Scumpia
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Mice, 129 Strain ,Immunology ,Inflammation ,Bone Marrow Cells ,Mice, Transgenic ,Biology ,Granulopoiesis ,CXCR4 ,Article ,Sepsis ,Mice ,medicine ,Immunology and Allergy ,Animals ,Mice, Knockout ,Myelopoiesis ,Mice, Inbred C3H ,medicine.disease ,Survival Analysis ,Neutrophilia ,Chemokine CXCL12 ,Mice, Inbred C57BL ,Haematopoiesis ,medicine.anatomical_structure ,Neutrophil Infiltration ,Acute Disease ,Bone marrow ,medicine.symptom ,Signal Transduction - Abstract
Neutrophils are essential for successful host eradication of bacterial pathogens and for survival to polymicrobial sepsis. During inflammation, the bone marrow provides a large reserve of neutrophils that are released into the peripheral circulation where they traverse to sites of infection. Although neutrophils are essential for survival, few studies have investigated the mechanisms responsible for neutrophil mobilization from the bone marrow during polymicrobial sepsis. Using a cecal ligation and puncture model of polymicrobial sepsis, we demonstrated that neutrophil mobilization from the bone marrow is not dependent on TLR4, MyD88, TRIF, IFNARα/β, or CXCR2 pathway signaling during sepsis. In contrast, we observed that bone marrow CXCL12 mRNA abundance and specific CXCL12 levels are sharply reduced, whereas splenic CXCR4 mRNA and cell surface expression are increased during sepsis. Blocking CXCL12 activity significantly reduced blood neutrophilia by inhibiting bone marrow release of granulocytes during sepsis. However, CXCL12 inhibition had no impact on the expansion of bone marrow neutrophil precursors and hematopoietic progenitors. Bone marrow neutrophil retention by CXCL12 blockade prevented blood neutrophilia, inhibited peritoneal neutrophil accumulation, allowed significant peritoneal bacterial invasion, and increased polymicrobial sepsis mortality. We concluded that changes in the pattern of CXCL12 signaling during sepsis are essential for neutrophil bone marrow mobilization and host survival but have little impact on bone marrow granulopoiesis.
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- 2011
48. Type II secretion system of Pseudomonas aeruginosa: in vivo evidence of a significant role in death due to lung infection
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Lhousseine Touqui, Jeevan Jyot, Michel Huerre, Amrisha Verma, Viviane Balloy, Grégory Jouvion, Michel Chignard, and Reuben Ramphal
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Proteases ,Time Factors ,Bacterial Toxins ,Biology ,medicine.disease_cause ,Microbiology ,Type three secretion system ,Mice ,Major Articles and Brief Reports ,Secretin ,medicine ,Pneumonia, Bacterial ,Immunology and Allergy ,Pseudomonas exotoxin ,Animals ,Secretion ,Pseudomonas Infections ,Lung ,Mice, Knockout ,Toll-like receptor ,Type II secretion system ,Pseudomonas aeruginosa ,Gene Expression Regulation, Bacterial ,Immunity, Innate ,Toll-Like Receptor 2 ,Toll-Like Receptor 4 ,Infectious Diseases ,Secretory protein ,Mutation ,Bronchoalveolar Lavage Fluid ,Immunocompetence ,Flagellin - Abstract
Pneumonia due to Pseudomonas aeruginosa carries a high mortality rate [1] attributed to its secreted exotoxins [2] and possibly the inflammatory response to bacterial products [3]. This bacterium is known to possess 5 protein secretion systems of which the type II secretion system (T2SS) and type III secretion system (T3SS) secrete the majority of known toxins. The T2SS secretes exotoxin A, LasA and LasB proteases, type IV protease, and phospholipase H, as well as lipolytic enzymes [4]. The T3SS secretes exotoxins U, S, T, and Y [5]. The latter system uses a membrane-spanning structure and needle to inject toxins into mammalian cells [6] whereas the T2SS is composed of multiprotein secretons encoded by the xcp and hxc operons [7] as well as an additional secretin, XqhA, that functions in T2 secretion when xcpQ, the major secretin, is mutated [8]. The biologic roles of the exoproducts of these systems have been under study for decades with clarity only about the role of the T3SS. Its major toxins, ExoU and ExoS cause death in animal models of pulmonary infection [9] and possible humans [10]. However, most studies with few exceptions have failed to demonstrate that the T2SS toxins are important virulence factors during pulmonary infections [11–13]. There are several possible reasons for this: (1) no studies have addressed the role of the T2SS as a whole in an acute pneumonia model; (2) multiple toxins may be involved in death confounding mutational analysis when the roles of single toxins were addressed; (3) the full repertoire of T2 secreted toxins is not known, and other unidentified toxins may be effectors in mortality; (4) studies were done in the presence of a fully functional T3SS; and (5) any contribution of inflammation as a cause of death was not circumvented. In prior studies, we demonstrated that Toll-like receptor (TLR) 2,4−/− mice are hypersusceptible to low inocula of a flagellin-negative mutant of P. aeruginosa, owing to the lack of recognition of lipopolysaccharide and flagellin [14]. In those studies, bronchoalveolar lavage (BAL) samples of infected mice demonstrated a grossly defective early inflammatory response [14], Thus, we hypothesized that death was due to bacterial toxins and not inflammation. Using this model, we conclusively demonstrate that both the T2SS and the T3SS play independent roles in death due to Pseudomonas lung infection and that the XcpQ secretin is the major outer membrane pathway used by the T2SS effectors.
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- 2011
49. SEPSIS INDUCES EARLY ALTERATIONS IN INNATE IMMUNITY THAT IMPACT MORTALITY TO SECONDARY INFECTION
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Alex G. Cuenca, Terri C. Thayer, Philip O. Scumpia, Michael Clare-Salzer, Mark A. Wallet, Robert D. Winfield, Sonia Gabrilovich, Elizabeth A. Warner, Shannon M. Wallet, Kindra M. Kelly-Scumpia, Clayton E. Mathews, Lyle L. Moldawer, Reuben Ramphal, Philip A. Efron, Kerri A. O’Malley, and Matthew J. Delano
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Time Factors ,Neutrophils ,Secondary infection ,Immunology ,Bacteremia ,Punctures ,Biology ,medicine.disease_cause ,Article ,Sepsis ,Mice ,Immunity ,medicine ,Pneumonia, Bacterial ,Immunology and Allergy ,Animals ,Genetic Predisposition to Disease ,Listeriosis ,Pseudomonas Infections ,Cecum ,Ligation ,Mice, Knockout ,Innate immune system ,Pseudomonas aeruginosa ,Monocyte ,Acquired immune system ,medicine.disease ,Immunity, Innate ,Mice, Inbred C57BL ,Disease Models, Animal ,medicine.anatomical_structure - Abstract
Sepsis, the systemic inflammatory response to microbial infection, induces changes in both innate and adaptive immunity that presumably lead to increased susceptibility to secondary infections, multiorgan failure, and death. Using a model of murine polymicrobial sepsis whose severity approximates human sepsis, we examined outcomes and defined requirements for survival after secondary Pseudomonas aeruginosa pneumonia or disseminated Listeria monocytogenes infection. We demonstrate that early after sepsis neutrophil numbers and function are decreased, whereas monocyte recruitment through the CCR2/MCP-1 pathway and function are enhanced. Consequently, lethality to Pseudomonas pneumonia is increased early but not late after induction of sepsis. In contrast, lethality to listeriosis, whose eradication is dependent upon monocyte/macrophage phagocytosis, is actually decreased both early and late after sepsis. Adaptive immunity plays little role in these secondary infectious responses. This study demonstrates that sepsis promotes selective early, impaired innate immune responses, primarily in neutrophils, that lead to a pathogen-specific, increased susceptibility to secondary infections.
- Published
- 2010
50. Flagellin/TLR5-dependent modulation of alveolar macrophage and epithelial cell activity by the antimicrobial molecule trappin-2
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Jean-Michel Sallenave, M. Le Gars, Viviane Balloy, Michel Chignard, Reuben Ramphal, and Delphyne Descamps
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Pulmonary and Respiratory Medicine ,congenital, hereditary, and neonatal diseases and abnormalities ,biology ,business.industry ,respiratory system ,medicine.disease ,Antimicrobial ,Cystic fibrosis ,digestive system diseases ,Epithelium ,respiratory tract diseases ,Cell biology ,medicine.anatomical_structure ,TLR5 ,Pediatrics, Perinatology and Child Health ,Alveolar macrophage ,medicine ,biology.protein ,Pediatrics, Perinatology, and Child Health ,business ,Flagellin - Published
- 2010
- Full Text
- View/download PDF
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