207 results on '"Suid"'
Search Results
2. Neuronal expression of herpes simplex virus-1 VP16 protein induces pseudorabies virus escape from silencing and reactivation.
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Hsu, Zhi-Shan, Engel, Esteban, Enquist, Lynn, and Koyuncu, Orkide
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VP16 protein ,alpha herpesvirus ,herpes simplex virus ,latency ,pseudorabies virus ,reactivation ,Animals ,Herpesvirus 1 ,Suid ,Virus Activation ,Neurons ,Herpes Simplex Virus Protein Vmw65 ,Herpesvirus 1 ,Human ,Virus Latency ,Gene Silencing ,Rats ,Axons ,Dependovirus ,Pseudorabies ,Cells ,Cultured ,Herpes Simplex - Abstract
Alpha herpesvirus (α-HV) particles enter their hosts from mucosal surfaces and efficiently maintain fast transport in peripheral nervous system (PNS) axons to establish infections in the peripheral ganglia. The path from axons to distant neuronal nuclei is challenging to dissect due to the difficulty of monitoring early events in a dispersed neuron culture model. We have established well-controlled, reproducible, and reactivateable latent infections in compartmented rodent neurons by infecting physically isolated axons with a small number of viral particles. This system not only recapitulates the physiological infection route but also facilitates independent treatment of isolated cell bodies or axons. Consequently, this system enables study not only of the stimuli that promote reactivation but also the factors that regulate the initial switch from productive to latent infection. Adeno-associated virus (AAV)-mediated expression of herpes simplex-1 (HSV-1) VP16 alone in neuronal cell bodies enabled the escape from silencing of incoming pseudorabies virus (PRV) genomes. Furthermore, the expression of HSV VP16 alone reactivated a latent PRV infection in this system. Surprisingly, the expression of PRV VP16 protein supported neither PRV escape from silencing nor reactivation. We compared transcription transactivation activity of both VP16 proteins in primary neurons by RNA sequencing and found that these homolog viral proteins produce different gene expression profiles. AAV-transduced HSV VP16 specifically induced the expression of proto-oncogenes including c-Jun and Pim2. In addition, HSV VP16 induces phosphorylation of c-Jun in neurons, and when this activity is inhibited, escape of PRV silencing is dramatically reduced.IMPORTANCEDuring latency, alpha herpesvirus genomes are silenced yet retain the capacity to reactivate. Currently, host and viral protein interactions that determine the establishment of latency, induce escape from genome silencing or reactivation are not completely understood. By using a compartmented neuronal culture model of latency, we investigated the effect of the viral transcriptional activator, VP16 on pseudorabies virus (PRV) escape from genome silencing. This model recapitulates the physiological infection route and enables the study of the stimuli that regulate the initial switch from a latent to productive infection. We investigated the neuronal transcriptional activation profiles of two homolog VP16 proteins (encoded by HSV-1 or PRV) and found distinct gene activation signatures leading to diverse infection outcomes. This study contributes to understanding of how alpha herpesvirus proteins modulate neuronal gene expression leading to the initiation of a productive or a latent infection.
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- 2024
3. Community partnership approaches to safe sleep (CPASS) program evaluation
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Gina S. Lowell, Jillian Sanford, Linda Radecki, Allison Hanes, Bonnie Kozial, Felicia Clark, Jennifer McCain, Asim Abbasi, Sevilay Dalabih, Benjamin D. Hoffman, and Lois K. Lee
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SUID ,SIDS ,ASSB ,Prevention ,Safe sleep ,Community partnerships ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Sudden unexpected infant death (SUID) continues to be a leading cause of death in infants in the United States (US), with significant disparities by race and socio-economic status. Infant safe sleep behaviors are associated with decreasing SUID risk, but challenges remain for families to practice these routinely. The objective of this program was to implement and evaluate a novel approach for an infant safe sleep pilot program built upon partnerships between hospitals and community-based organizations (CBOs) serving pregnant and parenting families in at-risk communities. Methods Community Partnership Approaches to Safe Sleep (CPASS) was a prospectively implemented infant safe sleep program. CPASS included children’s hospitals partnered with CBOs across five US cities: Portland, OR, Little Rock AR, Chicago, IL, Birmingham, AL, and Rochester, NY. The program consisted of (1) monthly learning community calls; (2) distribution of Safe Sleep Survival Kits; and (3) surveys of sites and families regarding program outcomes. Survey measures included (1) site participation in CPASS activities; (2) recipients’ use of Safe Sleep Kits; and (3) recipients’ safe sleep knowledge and behaviors. Results CPASS learning community activities were consistently attended by at least two representatives (1 hospital-based, 1 CBO-based) from each site. Across the five sites, 1002 safe kits were distributed over 9 months, the majority (> 85%) to families with infants ≤ 1 month old. Among participating families, 45% reported no safe sleep location before receipt of the kit. Family adherence to nighttime safe sleep recommendations included: (1) no bedsharing (M 6.0, SD 1.8, range 0–7); (2) sleep on back (M 6.3, SD 1.7, range 0–7); and (3) sleep in a crib with no blankets/toys (M 6.0, SD 2.0, range 0–7). Site interviews described how participation in CPASS influenced safe sleep conversations and incorporated local data into counseling. Hospital-CBO relationships were strengthened with program participation. Conclusions The CPASS pilot program provides a new, innovative model built on hospital-community partnerships for infant safe sleep promotion in SUID-impacted communities. CPASS reached families before their infant’s peak age risk for SUID and empowered families with knowledge and resources to practice infant safe sleep. Important lessons learned included improved ways to center and communicate with families.
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- 2024
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4. Known pathogenic gene variants and new candidates detected in sudden unexpected infant death using whole genome sequencing.
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Bard, Angela M., Clark, Lindsay V., Cosgun, Erdal, Aldinger, Kimberly A., Timms, Andrew, Quina, Lely A., Ferres, Juan M. Lavista, Jardine, David, Haas, Elisabeth A., Becker, Tatiana M., Pagan, Chelsea M., Santani, Avni, Martinez, Diego, Barua, Soumitra, McNutt, Zakkary, Nesbitt, Addie, Mitchell, Edwin A., and Ramirez, Jan‐Marino
- Abstract
The purpose of this study is to gain insights into potential genetic factors contributing to the infant's vulnerability to Sudden Unexpected Infant Death (SUID). Whole Genome Sequencing (WGS) was performed on 144 infants that succumbed to SUID, and 573 healthy adults. Variants were filtered by gnomAD allele frequencies and predictions of functional consequences. Variants of interest were identified in 88 genes, in 64.6% of our cohort. Seventy‐three of these have been previously associated with SIDS/SUID/SUDP. Forty‐three can be characterized as cardiac genes and are related to cardiomyopathies, arrhythmias, and other conditions. Variants in 22 genes were associated with neurologic functions. Variants were also found in 13 genes reported to be pathogenic for various systemic disorders and in two genes associated with immunological function. Variants in eight genes are implicated in the response to hypoxia and the regulation of reactive oxygen species (ROS) and have not been previously described in SIDS/SUID/SUDP. Seventy‐two infants met the triple risk hypothesis criteria. Our study confirms and further expands the list of genetic variants associated with SUID. The abundance of genes associated with heart disease and the discovery of variants associated with the redox metabolism have important mechanistic implications for the pathophysiology of SUID. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Community partnership approaches to safe sleep (CPASS) program evaluation.
- Author
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Lowell, Gina S., Sanford, Jillian, Radecki, Linda, Hanes, Allison, Kozial, Bonnie, Clark, Felicia, McCain, Jennifer, Abbasi, Asim, Dalabih, Sevilay, Hoffman, Benjamin D., and Lee, Lois K.
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SUDDEN infant death syndrome risk factors ,SLEEP aids ,PARENTS ,SAFETY ,HEALTH literacy ,RISK assessment ,INTERPROFESSIONAL relations ,HUMAN services programs ,RESEARCH funding ,EVALUATION of human services programs ,PILOT projects ,INTERVIEWING ,CHILDREN'S hospitals ,PREGNANT women ,DESCRIPTIVE statistics ,LONGITUDINAL method ,SURVEYS ,INFANT care ,SOUND recordings ,SLEEP ,RESEARCH methodology ,SLEEP quality ,COMMUNITY-based social services ,CHILDREN - Abstract
Background: Sudden unexpected infant death (SUID) continues to be a leading cause of death in infants in the United States (US), with significant disparities by race and socio-economic status. Infant safe sleep behaviors are associated with decreasing SUID risk, but challenges remain for families to practice these routinely. The objective of this program was to implement and evaluate a novel approach for an infant safe sleep pilot program built upon partnerships between hospitals and community-based organizations (CBOs) serving pregnant and parenting families in at-risk communities. Methods: Community Partnership Approaches to Safe Sleep (CPASS) was a prospectively implemented infant safe sleep program. CPASS included children's hospitals partnered with CBOs across five US cities: Portland, OR, Little Rock AR, Chicago, IL, Birmingham, AL, and Rochester, NY. The program consisted of (1) monthly learning community calls; (2) distribution of Safe Sleep Survival Kits; and (3) surveys of sites and families regarding program outcomes. Survey measures included (1) site participation in CPASS activities; (2) recipients' use of Safe Sleep Kits; and (3) recipients' safe sleep knowledge and behaviors. Results: CPASS learning community activities were consistently attended by at least two representatives (1 hospital-based, 1 CBO-based) from each site. Across the five sites, 1002 safe kits were distributed over 9 months, the majority (> 85%) to families with infants ≤ 1 month old. Among participating families, 45% reported no safe sleep location before receipt of the kit. Family adherence to nighttime safe sleep recommendations included: (1) no bedsharing (M 6.0, SD 1.8, range 0–7); (2) sleep on back (M 6.3, SD 1.7, range 0–7); and (3) sleep in a crib with no blankets/toys (M 6.0, SD 2.0, range 0–7). Site interviews described how participation in CPASS influenced safe sleep conversations and incorporated local data into counseling. Hospital-CBO relationships were strengthened with program participation. Conclusions: The CPASS pilot program provides a new, innovative model built on hospital-community partnerships for infant safe sleep promotion in SUID-impacted communities. CPASS reached families before their infant's peak age risk for SUID and empowered families with knowledge and resources to practice infant safe sleep. Important lessons learned included improved ways to center and communicate with families. [ABSTRACT FROM AUTHOR]
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- 2024
- Full Text
- View/download PDF
6. Characteristics Associated with Sudden Unexpected Infant Death in a Rural Hispanic Population: A Case-Control Study
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Ahlers-Schmidt, Carolyn R., Okut, Hayrettin, Jacobson, Lisette T., Hervey, Ashley, Schunn, Christy, Torres, Maria, and Kuhlmann, Zachary
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- 2025
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7. The risk of sleep-related death in an inclined sleep environment
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Laura R. Sangaré, Lance Kaufman, Robert A. Bardwell, Deborah Nichols, and Mersine Bryan
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SUID ,Epidemiology ,Infant ,Sleep ,Asphyxia ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Unsafe sleep environments are the primary modifiable risk factor for sudden unexpected infant death (SUID). Despite this knowledge, products that deviate from the American Academy of Pediatrics (AAP) safe sleep recommendations continue to be commonplace, such as inclined sleepers. Analyses to estimate risk among these products are lacking, perpetuating their presence in the marketplace. We present a method of comparing risk of SUID in an inclined sleeper to an AAP-recommended sleep environment. Methods A case-control analysis using publicly available and previously published survey data was conducted for SUID events occurring between January 1, 2018 and April 12, 2019 (the date of the first inclined sleeper recall). SUID deaths were categorized as occurring in an AAP-recommended sleep environments or in an inclined sleeper. Exposure Odds Ratios (OR) are reported as the risk of SUID among infants using inclined sleepers relative to an AAP-recommended sleep environment. Results During the study period, 4,900,573 births and 4,363 SUID deaths occurred in the US. Control characteristics were similar between previous night users of an AAP-recommended sleep environment (24%) and inclined sleepers (3.8%). Inclined sleepers were associated with a 5-fold (OR: 5.1; 95% CI: 3.2, 7.9) increased risk of SUID among infants
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- 2024
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8. The risk of sleep-related death in an inclined sleep environment.
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Sangaré, Laura R., Kaufman, Lance, Bardwell, Robert A., Nichols, Deborah, and Bryan, Mersine
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SUDDEN infant death syndrome ,ODDS ratio ,CASE-control method ,RISK assessment ,INFANTS - Abstract
Background: Unsafe sleep environments are the primary modifiable risk factor for sudden unexpected infant death (SUID). Despite this knowledge, products that deviate from the American Academy of Pediatrics (AAP) safe sleep recommendations continue to be commonplace, such as inclined sleepers. Analyses to estimate risk among these products are lacking, perpetuating their presence in the marketplace. We present a method of comparing risk of SUID in an inclined sleeper to an AAP-recommended sleep environment. Methods: A case-control analysis using publicly available and previously published survey data was conducted for SUID events occurring between January 1, 2018 and April 12, 2019 (the date of the first inclined sleeper recall). SUID deaths were categorized as occurring in an AAP-recommended sleep environments or in an inclined sleeper. Exposure Odds Ratios (OR) are reported as the risk of SUID among infants using inclined sleepers relative to an AAP-recommended sleep environment. Results: During the study period, 4,900,573 births and 4,363 SUID deaths occurred in the US. Control characteristics were similar between previous night users of an AAP-recommended sleep environment (24%) and inclined sleepers (3.8%). Inclined sleepers were associated with a 5-fold (OR: 5.1; 95% CI: 3.2, 7.9) increased risk of SUID among infants < 12 months compared to infants in an AAP-recommended sleep environment. This risk was greatest among infants ≥ 4 months (RR: 10.4; 95% CI: 5.1, 21.5). Conclusions: This novel analysis fills a longstanding gap in risk assessments of inclined infant sleep products. More timely risk analyses may improve the safety of the marketplace. [ABSTRACT FROM AUTHOR]
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- 2024
- Full Text
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9. Risk factors for unexpected infant death among very premature infants in France.
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Bourneuf, Anne-Laure, Pabic, Estelle Le, de Visme, Sophie, Levieux, Karine, and Pladys, Patrick
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INFANT death , *STANDARD deviations , *BREASTFEEDING , *POSTNATAL care , *SOCIOECONOMIC factors - Abstract
Prematurity is one of the risk factors for sudden unexpected infant death (SUID), a phenomenon that remains poorly explained. The analysis of specific factors associated with SUID among very premature infants (VPI) was performed through a retrospective review of data collected in the French SUID registry from May 2015 to December 2018. The factors associated with SUID among VPI were compared with those observed among full-term infants (FTI). Results are expressed as means (standard deviation [SD]) or medians (interquartile range [IQR)]. During the study period, 719 cases of SUID were included in the registry, 36 (incidence: 0.60 ‰) of which involved VPI (gestational age: 29.2 [2] weeks, 1157 [364]) g] and 313 (0.18 ‰) involved FTI (gestational age: 40 [0.8] weeks, 3298 [452] g). The infants' postnatal age at the time of death was similar in the two groups: 15.5 (12.2–21.8) vs. 14.5 (7.1–23.4) weeks. We observed low breastfeeding rates and a high proportion of fathers with no occupation or unemployment status among the VPI compared to the FTI group (31% vs. 55 %, p = 0.01 and 32% vs. 13 %, p = 0.05, respectively). Among the VPI, only 52 % were in supine position, and 29 % were lying prone at the time of the SUID (compared to 63 % and 17 %, respectively, in the FTI group). This study confirms prematurity as a risk factor for SUID with no difference in the SUID-specific risk factors studied except for breastfeeding and socioeconomic status of the fathers. VPI and FTI died at similar chronological ages with a high proportion of infants dying in prone position. These results argue for reinforcement of prevention strategies in cases of prematurity. [ABSTRACT FROM AUTHOR]
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- 2024
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10. A Pseudorabies Virus Serine/Threonine Kinase, US3, Promotes Retrograde Transport in Axons via Akt/mToRC1
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Esteves, Andrew D, Koyuncu, Orkide O, and Enquist, Lynn W
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Neurosciences ,Infectious Diseases ,Underpinning research ,1.1 Normal biological development and functioning ,Infection ,Animals ,Axons ,Herpesvirus 1 ,Suid ,Mechanistic Target of Rapamycin Complex 1 ,Nucleocapsid ,Phosphatidylinositol 3-Kinases ,Protein Serine-Threonine Kinases ,Proto-Oncogene Proteins c-akt ,Akt ,PRV ,axon ,retrograde transport ,US3 ,mToRC1 ,translation ,viral entry ,kinase ,intracellular transport ,pseudorabies virus ,Biological Sciences ,Agricultural and Veterinary Sciences ,Medical and Health Sciences ,Virology - Abstract
Infection of peripheral axons by alpha herpesviruses (AHVs) is a critical stage in establishing a lifelong infection in the host. Upon entering the cytoplasm of axons, AHV nucleocapsids and associated inner-tegument proteins must engage the cellular retrograde transport machinery to promote the long-distance movement of virion components to the nucleus. The current model outlining this process is incomplete, and further investigation is required to discover all viral and cellular determinants involved as well as the temporality of the events. Using a modified trichamber system, we have discovered a novel role of the pseudorabies virus (PRV) serine/threonine kinase US3 in promoting efficient retrograde transport of nucleocapsids. We discovered that transporting nucleocapsids move at similar velocities in both the presence and absence of a functional US3 kinase; however, fewer nucleocapsids are moving when US3 is absent, and they move for shorter periods of time before stopping, suggesting that US3 is required for efficient nucleocapsid engagement with the retrograde transport machinery. This led to fewer nucleocapsids reaching the cell bodies to produce a productive infection 12 h later. Furthermore, US3 was responsible for the induction of local translation in axons as early as 1 h postinfection (hpi) through the stimulation of a phosphatidylinositol 3-kinase (PI3K)/Akt-mToRC1 pathway. These data describe a novel role for US3 in the induction of local translation in axons during AHV infection, a critical step in transport of nucleocapsids to the cell body. IMPORTANCE Neurons are highly polarized cells with axons that can reach centimeters in length. Communication between axons at the periphery and the distant cell body is a relatively slow process involving the active transport of chemical messengers. There is a need for axons to respond rapidly to extracellular stimuli. Translation of repressed mRNAs present within the axon occurs to enable rapid, localized responses independently of the cell body. AHVs have evolved a way to hijack local translation in the axons to promote their transport to the nucleus. We have determined the cellular mechanism and viral components involved in the induction of axonal translation. The US3 serine/threonine kinase of PRV activates Akt-mToRC1 signaling pathways early during infection to promote axonal translation. When US3 is not present, the number of moving nucleocapsids and their processivity are reduced, suggesting that US3 activity is required for efficient engagement of nucleocapsids with the retrograde transport machinery.
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- 2022
11. Photos Shared on Facebook in the Context of Safe Sleep Recommendations: Content Analysis of Images.
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Pretorius, Kelly, Kang, Sookja, and Choi, Eunju
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MEDICAL personnel , *SUDDEN infant death syndrome , *INFANT mortality , *FOREIGN bodies , *IMAGE analysis - Abstract
Background: Sudden unexpected infant death (SUID) remains a leading cause of infant mortality; therefore, understanding parental practices of infant sleep at home is essential. Since social media analyses yield invaluable patient perspectives, understanding sleep practices in the context of safe sleep recommendations via a Facebook mothers' group is instrumental for policy makers, health care providers, and researchers. Objective: This study aimed to identify photos shared by mothers discussing SUID and safe sleep online and assess their consistency with infant sleep guidelines per the American Academy of Pediatrics (AAP). We hypothesized the photos would not be consistent with guidelines based on prior research and increasing rates of accidental suffocation and strangulation in bed. Methods: Data were extracted from a Facebook mothers' group in May 2019. After trialing various search terms, searching for the term "SIDS" on the selected Facebook group resulted in the most relevant discussions on SUID and safe sleep. The resulting data, including 20 posts and 912 comments among 512 mothers, were extracted and underwent qualitative descriptive content analysis. In completing the extraction and subsequent analysis, 24 shared personal photos were identified among the discussions. Of the photos, 14 pertained to the infant sleep environment. Photos of the infant sleep environment were then assessed for consistency with safe sleep guidelines per the AAP standards by 2 separate reviewers. Results: Of the shared photos relating to the infant sleep environment, 86% (12/14) were not consistent with AAP safe sleep guidelines. Specific inconsistencies included prone sleeping, foreign objects in the sleeping environment, and use of infant sleeping devices. Use of infant monitoring devices was also identified. Conclusions: This study is unique because the photos originated from the home setting, were in the context of SUID and safe sleep, and were obtained without researcher interference. Despite study limitations, the commonality of prone sleeping, foreign objects, and the use of both infant sleep and monitoring devices (ie, overall inconsistency regarding AAP safe sleep guidelines) sets the stage for future investigation regarding parental barriers to practicing safe infant sleep and has implications for policy makers, clinicians, and researchers. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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12. Barcoded viral tracing of single-cell interactions in central nervous system inflammation
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Clark, Iain C, Gutiérrez-Vázquez, Cristina, Wheeler, Michael A, Li, Zhaorong, Rothhammer, Veit, Linnerbauer, Mathias, Sanmarco, Liliana M, Guo, Lydia, Blain, Manon, Zandee, Stephanie EJ, Chao, Chun-Cheih, Batterman, Katelyn V, Schwabenland, Marius, Lotfy, Peter, Tejeda-Velarde, Amalia, Hewson, Patrick, Manganeli Polonio, Carolina, Shultis, Michael W, Salem, Yasmin, Tjon, Emily C, Fonseca-Castro, Pedro H, Borucki, Davis M, Alves de Lima, Kalil, Plasencia, Agustin, Abate, Adam R, Rosene, Douglas L, Hodgetts, Kevin J, Prinz, Marco, Antel, Jack P, Prat, Alexandre, and Quintana, Francisco J
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Brain Disorders ,Autoimmune Disease ,Multiple Sclerosis ,Neurosciences ,Genetics ,Neurodegenerative ,Aetiology ,2.1 Biological and endogenous factors ,Neurological ,Good Health and Well Being ,Animals ,Antigens ,CD ,Astrocytes ,Brain ,Cell Communication ,Central Nervous System ,Encephalomyelitis ,Autoimmune ,Experimental ,Ephrin-B3 ,Herpesvirus 1 ,Suid ,Humans ,Male ,Mice ,Mice ,Inbred C57BL ,Microglia ,Mitochondria ,NF-kappa B ,Nerve Tissue Proteins ,RNA-Seq ,Reactive Oxygen Species ,Receptor ,EphB3 ,Receptors ,Cell Surface ,Semaphorins ,Signal Transduction ,Single-Cell Analysis ,T-Lymphocytes ,TOR Serine-Threonine Kinases ,General Science & Technology - Abstract
Cell-cell interactions control the physiology and pathology of the central nervous system (CNS). To study astrocyte cell interactions in vivo, we developed rabies barcode interaction detection followed by sequencing (RABID-seq), which combines barcoded viral tracing and single-cell RNA sequencing (scRNA-seq). Using RABID-seq, we identified axon guidance molecules as candidate mediators of microglia-astrocyte interactions that promote CNS pathology in experimental autoimmune encephalomyelitis (EAE) and, potentially, multiple sclerosis (MS). In vivo cell-specific genetic perturbation EAE studies, in vitro systems, and the analysis of MS scRNA-seq datasets and CNS tissue established that Sema4D and Ephrin-B3 expressed in microglia control astrocyte responses via PlexinB2 and EphB3, respectively. Furthermore, a CNS-penetrant EphB3 inhibitor suppressed astrocyte and microglia proinflammatory responses and ameliorated EAE. In summary, RABID-seq identified microglia-astrocyte interactions and candidate therapeutic targets.
- Published
- 2021
13. Impact of State Prioritization of Safe Infant Sleep Programs on Supine Sleep Positioning for Non-Hispanic White and Non-Hispanic Black Infants.
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Hwang, Sunah S., Tong, Suhong, Pyle, Laura, Battaglia, Catherine, McManus, Beth, Niermeyer, Susan, and Sauaia, Angela
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SUDDEN infant death syndrome prevention , *HEALTH policy , *EVALUATION of medical care , *EVALUATION of human services programs , *HISPANIC Americans , *BLACK people , *CROSS-sectional method , *RETROSPECTIVE studies , *REGRESSION analysis , *RACE , *SLEEP , *DESCRIPTIVE statistics , *WHITE people , *HEALTH equity , *SUPINE position , *CHILDREN - Abstract
Objective Investigate whether safe infant sleep prioritization by states through the Title V Maternal and Child Block Grant in 2010 differentially impacted maternal report of supine sleep positioning (SSP) for Non-Hispanic White (NHW) and Non-Hispanic Black (NHB) U.S.-born infants. Study Design We analyzed retrospective cross-sectional data from the Pregnancy Risk Assessment Monitoring System (PRAMS) from 2005 to 2015 from 4 states: WV and OK (Intervention) and AR and UT (Control). PRAMS is a population-based surveillance system of maternal perinatal experiences which is linked to infant birth certificates. Piece-wise survey linear regression models were used to estimate the difference in the change in slopes of SSP percents in the pre- (2005–2009) and post- (2011–2015) periods, controlling for maternal and infant characteristics. Models were also stratified by race/ethnicity. Results From 2005 to 2015, for NHW infants, SSP improved from 61.5% and 70.2% to 82.8% and 82.3% for intervention and control states, respectively. For NHB infants, SSP improved from 30.6% and 26.5% to 64.5% and 53.1% for intervention and control states, respectively. After adjustment for maternal characteristics, there was no difference in the rate of SSP change from the pre- to post- intervention periods for either NHW or NHB infants in intervention or control groups. Conclusion Compared with control states that did not prioritize safe infant sleep in their 2010 Title V Block Grant needs assessment, intervention states experienced no difference in SSP improvement rates for NHW and NHB infants. While SSP increased for all infants during the study period, there was no causal relationship between states' prioritization of safe infant sleep and SSP improvement. More targeted approaches may be needed to reduce the racial/ethnic disparity in SSP and reduce the risk for sleep-associated infant death. Key Points Supine sleep positioning improved for Black and White infants in the U.S. State prioritization of safe infant sleep did not directly impact SSP for NHB or NHW infants. More targeted approaches may be needed to reduce racial/ethnic disparities in safe sleep practices [ABSTRACT FROM AUTHOR]
- Published
- 2023
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14. Parental Knowledge and Perceptions on Prevention of Sudden Unexpected Infant Death and Infant Care.
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Nazaruk, Dziyana, Palacios, Ana M., Chopak-Foss, Joanne, Mayo-Gamble, Tilicia L., and Marshall, Nandi A.
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SUDDEN infant death syndrome prevention ,MOTHERS ,ATTITUDES of mothers ,CONFIDENCE ,INFANT care ,SOCIAL support ,RESEARCH methodology ,INTERVIEWING ,HEALTH literacy ,QUALITATIVE research ,COMPARATIVE studies ,QUESTIONNAIRES ,DESCRIPTIVE statistics ,INTERPERSONAL relations ,JUDGMENT sampling ,DATA analysis software ,THEMATIC analysis - Abstract
(1) Background: The study's purpose was to explore the knowledge, perceptions, and confidence of mothers about infant care to reduce the risk of sudden unexpected infant death. (2) Methods: A purposeful sampling method was used to recruit 15 first-time mothers from Georgia with infants under 1 year of age. The researchers utilized the Socio-ecological model to report the results. Participants also provided recommendations on how to improve infant care and reduce the risk of SUID. (3) Results: The confidence level of infant care among most participants was low but increased over time. Mothers' knowledge level about the prevention of SUID was high, but poor emotional health could hurt their parental abilities. Most participants recognized medical providers as the main source of reliable information. However, a lack of emotional and physical support was reported by mothers. (4) Conclusions: Results suggested that a more holistic approach to infant care is needed. The healthcare system and communities should provide more physical, social, and mental support to first-time mothers, a consolidated approach to care before and after birth, and easy access to services at all stages of the process to reduce the risk of SUID. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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15. NICU Visitation Time and Adherence to Safe Sleep Practices Among Mothers of Very Preterm Infants.
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Hwang, Sunah S., Weikel, Blair W., Palau, Mauricio A., Greenfield, Jennifer C., Klawetter, Susanne, Neu, Madalynn, Roybal, Kristi L., Scott, Jessica, Shah, Pari, Bourque, Stephanie L., Dowling, Donna, Newberry, Desi M., and Parker, Leslie
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SUDDEN infant death syndrome prevention ,VISITING the sick ,LENGTH of stay in hospitals ,INFANT care ,NEONATAL intensive care ,SCIENTIFIC observation ,CONFIDENCE intervals ,PSYCHOLOGY of mothers ,MULTIPLE regression analysis ,SLEEP hygiene ,NEONATAL intensive care units ,HOSPITAL care of newborn infants ,MOTHERHOOD ,HEALTH insurance ,DESCRIPTIVE statistics ,MENTAL depression ,RESEARCH funding ,ODDS ratio ,ANXIETY ,DISCHARGE planning ,LONGITUDINAL method ,EDUCATIONAL attainment - Abstract
Background: Sleep-associated infant death is the leading cause of postneonatal mortality in the United States. Preterm infants are at higher risk for sleep-associated death, but maternal adherence to safe sleep practices is lower than for mothers of full-term infants. Data are lacking on whether maternal neonatal intensive care unit (NICU) visitation time impacts safe sleep compliance after hospital discharge. Purpose: For mothers of preterm infants, to investigate the association of time days per week spent in the NICU and adherence to safe sleep practices after discharge. Methods: A prospective observational study of 109 mothers with infants born at less than 32 weeks from 4 Colorado NICUs who completed a survey at 6 weeks after discharge about infant sleep practices. Maternal time spent in the NICU was defined as the average number of days spent in the NICU per week of infant hospitalization, as documented in the electronic medical record. Multivariable logistic regression models assessed the relationship between time in the NICU and safe sleep adherence. Covariates included maternal/infant characteristics significant at P <.2 level in bivariate analysis. Results: Predictors of compliance with all safe infant sleep practices included public/no insurance compared with private insurance (adjusted odds ratio [AOR] 0.29; 95% confidence interval [CI] 0.09-0.96), some college/associate-level education versus bachelor's degree (AOR 5.88; 95% CI 1.21-28.67), and depression/anxiety symptoms (AOR 0.37; 95% CI 0.14-0.97). NICU visitation days was not associated with adherence to safe sleep practices. Implications for Practice and Research: Maternal visitation days was not associated with adherence to safe infant sleep practices after discharge, highlighting the need to identify barriers and facilitators to engaging families about SUID risk-reducing behaviors. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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16. Function of Torsin AAA+ ATPases in Pseudorabies Virus Nuclear Egress
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Hölper, Julia E, Klupp, Barbara G, Luxton, GW Gant, Franzke, Kati, and Mettenleiter, Thomas C
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Biochemistry and Cell Biology ,Biological Sciences ,Infectious Diseases ,Genetics ,2.1 Biological and endogenous factors ,2.2 Factors relating to the physical environment ,Infection ,ATPases Associated with Diverse Cellular Activities ,Active Transport ,Cell Nucleus ,Animals ,Cell Nucleus ,Cytoplasm ,Herpesvirus 1 ,Suid ,Molecular Chaperones ,Nuclear Envelope ,Rabbits ,Viral Proteins ,Virus Release ,herpesvirus ,pseudorabies virus ,nuclear egress ,AAA plus ATPase ,Torsin ,CRISPR ,Cas9 ,AAA+ ATPase ,CRISPR/Cas9 ,Biological sciences ,Biomedical and clinical sciences - Abstract
Newly assembled herpesvirus nucleocapsids traverse the intact nuclear envelope by a vesicle-mediated nucleo-cytoplasmic transport for final virion maturation in the cytoplasm. For this, they bud at the inner nuclear membrane resulting in primary enveloped particles in the perinuclear space (PNS) followed by fusion of the primary envelope with the outer nuclear membrane (ONM). While the conserved viral nuclear egress complex orchestrates the first steps, effectors of fusion of the primary virion envelope with the ONM are still mostly enigmatic but might include cellular proteins like SUN2 or ESCRT-III components. Here, we analyzed the influence of the only known AAA+ ATPases located in the endoplasmic reticulum and the PNS, the Torsins (Tor), on nuclear egress of the alphaherpesvirus pseudorabies virus. For this overexpression of wild type and mutant proteins as well as CRISPR/Cas9 genome editing was applied. Neither single overexpression nor gene knockout (KO) of TorA or TorB had a significant impact. However, TorA/B double KO cells showed decreased viral titers at early time points of infection and an accumulation of primary virions in the PNS pointing to a delay in capsid release during nuclear egress.
- Published
- 2020
17. Assessing infant sleep practices and other risk factors of SIDS in Zambia: a cross-sectional survey of mothers in Lusaka, Zambia
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Godwin K. Osei-Poku, Lawrence Mwananyanda, Patricia A. Elliot, William B. MacLeod, Somwe Wa Somwe, Rachel C. Pieciak, and Christopher J. Gill
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SIDS ,SUID ,Bedsharing ,Sleep position ,Pediatrics ,RJ1-570 - Abstract
Abstract Background Having infants sleep with their parents and sleeping face down or on their sides are the two most proximate and modifiable risk factors for sudden infant death syndrome (SIDS). Little is known about the burden of SIDS or the prevalence of these risk factors in Africa. Our primary objective was to determine the prevalence of modifiable risk factors of SIDS in Lusaka, Zambia. Methods We conducted cross-sectional surveys with recent mothers of infants aged 2 months old were twice as likely to be put to sleep in a prone position compared to infants aged less than 2 months old. Mothers reported that they rarely (24.1%) received advice from medical caregivers to use the supine position. Maternal use of alcohol (12.0%) and tobacco (0.8%) during pregnancy were uncommon. Conclusions Bedsharing and placing the infant to sleep on the side were commonly reported among the mothers we interviewed. Whether this represents an opportunity to reduce SIDS in Zambia is unclear since accurate data on the burden of SIDS in Zambia is not available. There is a need for increased awareness of SIDS and more prospective data collection on its burden and related risk factors in these African populations.
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- 2022
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18. Co‐occurrence of native white‐tailed deer and invasive wild pigs: Evidence for competition?
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Garabedian, James E., Cox, Kyle J., Vukovich, Mark, and Kilgo, John C.
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WILD boar ,WHITE-tailed deer ,INTRODUCED species ,DEER ,COMPETITION (Biology) - Abstract
Understanding whether invasive and native species compete for shared resources where they co‐occur is essential for mitigating the negative impacts of invasive species on native ecosystems. Here, we examined how the presence and density of an invasive species, wild pigs (Sus scrofa), affect native white‐tailed deer (Odocoileus virginianus; hereafter, deer) on the Savannah River Site, SC, USA. We examined potential changes in deer areas of use, temporal overlap, and occupancy to evaluate the effects of wild pig occurrence and density on deer space use, diel activity, and co‐occurrence with wild pigs across 9 months during 2018 and 2019. Wild pig density had the strongest effect on deer space use in high‐ and moderate‐use areas. Declines in deer space use in response to wild pig density were most pronounced in March and October 2018 and April 2019 for females, while male space use declined in response to wild pig density in October and December 2018. Both species were largely nocturnal with high overlap in diel activity across months. Deer occupancy responses to wild pig density varied across months, with negative responses in May and October 2018 and positive responses in July 2018 and April 2019. Deer and wild pigs co‐occurred at 30%–59% of camera stations across months, with broadscale co‐occurrence patterns being unaffected by changes in shared cover or wild pig occurrence. Overall, our results suggest that deer make fine‐scale behavioral adjustments to avoid wild pigs, providing evidence that competition is likely occurring even where wild pig density is relatively low. Such fine‐scale behavioral plasticity in deer appears to mitigate the costs of competition with wild pigs and may be a mechanism enabling long‐term co‐existence of deer and wild pigs. Our study provides novel insight on the complexities of spatiotemporal relationships between invasive wild pigs and native deer and suggests that the negative effects of interactions between deer and wild pigs may be more pronounced when deer life history needs are particularly demanding. In areas where eradication of invasive wild pigs may be impossible, maintaining low wild pig densities may help mitigate, but may not eliminate, the negative effects of wild pigs on deer. [ABSTRACT FROM AUTHOR]
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- 2023
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19. Racial and ethnic disparities of sudden unexpected infant death in large US cities: a descriptive epidemiological study
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Brett T. Boyer, Gina S. Lowell, Douglas R. Roehler, and Kyran P. Quinlan
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SUID ,Race and ethnicity ,US cities ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Sudden unexpected infant death (SUID) accounts for ~ 3400 deaths per year in the USA, and minimal progress has been made in reducing SUID over the past two decades. SUID is the sudden death of an infant that has occurred as a result of accidental suffocation in a sleeping environment, SIDS (sudden infant death syndrome), or from an unknown cause of death. Nationally, non-Hispanic Black (NHB) infants have twice the risk of SUID compared to non-Hispanic White (NHW) infants. In Chicago, this disparity is greatly magnified. To explore whether this disparity is similarly seen in other large cities, we analyzed SUIDs by race and ethnicity for a seven-year period from the 10 most populous US cities. SUID case counts by race and ethnicity were obtained for 2011–2017 from the 10 most populous US cities based on 2010 census data. For each city, we calculated average annual SUID rates (per 1000 live births) by race and ethnicity, allowing calculation of disparity rate ratios. Findings Nationally, from 2011 through 2017, there were 0.891 SUIDs per 1000 live births, with a rate of 0.847 for NHWs, 1.795 for NHBs, and 0.522 for Hispanics. In most study cities, the NHB and Hispanic SUID rates were higher than the corresponding national rate. Hispanic SUID rates were higher than NHW rates in 9 of the 10 largest cities. In every study city, the NHW SUID rate was lower than the national NHW rate. In Chicago, NHB infants had a SUID rate 12.735 times that of NHW infants. Conclusion With few exceptions, the 10 largest US cities had higher NHB and Hispanic SUID rates, but lower NHW SUID rates, compared to the corresponding rates at the national level. Unlike the national pattern, Hispanic SUID rates were higher than NHW rates in 9 of the 10 largest cities. Prevention is currently hampered by the lack of detailed, accurate, and timely information regarding the circumstances of these tragic deaths. A national SUID surveillance system would allow greater understanding of the factors that lead to this disproportionately distributed and enduring cause of infant death.
- Published
- 2022
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20. Biogeography and conservation of desert warthog Phacochoerus aethiopicus and common warthog Phacochoerus africanus (Artiodactyla: Suidae) in the Horn of Africa.
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de Jong, Yvonne A., d'Huart, Jean-Pierre, and Butynski, Thomas M.
- Subjects
- *
BIOGEOGRAPHY , *ARTIODACTYLA , *RAINFALL , *CURRENT distribution , *DESERTS - Abstract
Two species of warthog are currently widely recognised, the poorly known desert warthog Phacochoerus aethiopicus and the widely distributed common warthog Phacochoerus africanus. Spatial data for both species were collected during field surveys and from the literature, museums, colleagues, naturalists, local experts, and online resources to assess their biogeography in the Horn of Africa (HoA). Their distributions were overlaid with ArcGIS datasets for altitude, rainfall, temperature, and ecoregions. Phacochoerus aethiopicus appears to be restricted to Ethiopia, Kenya, and Somalia, with no records west of the Eastern Rift Valley (ERV). The estimated current geographic distribution of P. aethiopicus is 1,109,000 km2. Phacochoerus africanus occurs in all five countries of the HoA and has an estimated current geographic distribution in the HoA of 1,213,000 km2. Phacochoerus africanus appears to be the more adaptable species although P. aethiopicus is able to live where mean annual rainfall is more variable. Although both species are allopatric over vast regions, they are sympatric in central east Ethiopia, north Somalia, central Kenya, north coast of Kenya, and southeast Kenya. Both suids remain locally common, their populations are, however, in decline due to the negative impacts on the environment by the rapidly growing human populations in all five countries. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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21. Racial and incident discrepancies in news media reporting of sudden unexpected infant death (SUID).
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Lazarus, Sarah Gard, Miller, Terri, Hudson, Philip J., McFadden, Terri, Baas, Gretchen, and Kendi, Sadiqa
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RACISM ,RELATIVE medical risk ,MASS media ,CONFIDENCE intervals ,BLACK people ,SUDDEN infant death syndrome ,WOUNDS & injuries ,WHITE people ,DATA analysis software ,CHILDREN - Abstract
Background: Regardless of injury prevention and outreach efforts, there continue to be low rates of adherence with the American Academy of Pediatrics (AAP) safe sleep recommendations. Media is an important tool for parental education and may influence risk perception and caregiver choices. Due to media reports potentially serving as an opportunity for shaping social norms, caregiver education and injury prevention, an evaluation was undertaken to evaluate Georgia local news reporting of sudden unexpected infant death (SUID) as compared to drownings, homicides, and firearm injuries. Our objective was to evaluate incident and racial discrepancies in Georgia news media reporting of SUID as compared to other pediatric injury deaths. Results: Despite its high incidence, SUID was far less commonly mentioned in the news media, with only 1.9% (10/525) mentioned as compared to 8.1% of drownings (17/211), 11.4% (74/649) of MVC's, 14.7% (59/402) of homicides between ages 1–18, 20% (11/55) of fire-related deaths and 25% (15/59) of homicides under age one (infant homicides). Across SUID and homicide, deaths of White infants were reported in the news media at 2.5 times the rate of Black infants. Conclusion: Despite SUID being a leading cause of infant death, it is infrequently mentioned in the news media. When mentioned, the news media are more likely to highlight the deaths of White infants as compared to Black infants, though the incidence rate of SUID is higher in Black infants as compared to White. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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22. Sudden Unexpected Infant Death : A Review for the Middle East Region
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Hamadneh, Shereen M., Kassab, Manal, Eaton, Arieanna, Wilkinson, Anne, Creedy, Debra K., Arabiat, Diana, Section editor, Basaleem, Huda Omer, Section editor, and Laher, Ismail, editor
- Published
- 2021
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23. Parental Knowledge and Perceptions on Prevention of Sudden Unexpected Infant Death and Infant Care
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Dziyana Nazaruk, Ana M. Palacios, Joanne Chopak-Foss, Tilicia L. Mayo-Gamble, and Nandi A. Marshall
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infant care ,parental knowledge ,parental perceptions ,infant health ,prevention of sudden unexpected infant death ,SUID ,Pediatrics ,RJ1-570 - Abstract
(1) Background: The study’s purpose was to explore the knowledge, perceptions, and confidence of mothers about infant care to reduce the risk of sudden unexpected infant death. (2) Methods: A purposeful sampling method was used to recruit 15 first-time mothers from Georgia with infants under 1 year of age. The researchers utilized the Socio-ecological model to report the results. Participants also provided recommendations on how to improve infant care and reduce the risk of SUID. (3) Results: The confidence level of infant care among most participants was low but increased over time. Mothers’ knowledge level about the prevention of SUID was high, but poor emotional health could hurt their parental abilities. Most participants recognized medical providers as the main source of reliable information. However, a lack of emotional and physical support was reported by mothers. (4) Conclusions: Results suggested that a more holistic approach to infant care is needed. The healthcare system and communities should provide more physical, social, and mental support to first-time mothers, a consolidated approach to care before and after birth, and easy access to services at all stages of the process to reduce the risk of SUID.
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- 2023
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24. Assessing infant sleep practices and other risk factors of SIDS in Zambia: a cross-sectional survey of mothers in Lusaka, Zambia.
- Author
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Osei-Poku, Godwin K., Mwananyanda, Lawrence, Elliot, Patricia A., MacLeod, William B., Somwe, Somwe Wa, Pieciak, Rachel C., and Gill, Christopher J.
- Subjects
MOTHERS ,INFANTS ,SUDDEN infant death syndrome ,SLEEP positions ,PATIENT positioning - Abstract
Background: Having infants sleep with their parents and sleeping face down or on their sides are the two most proximate and modifiable risk factors for sudden infant death syndrome (SIDS). Little is known about the burden of SIDS or the prevalence of these risk factors in Africa. Our primary objective was to determine the prevalence of modifiable risk factors of SIDS in Lusaka, Zambia.Methods: We conducted cross-sectional surveys with recent mothers of infants aged < 1 year across two busy urban clinic sites in Lusaka, Zambia. We used log-binomial regression analysis to identify factors predictive of bedsharing and prone sleeping.Results: Surveys were conducted with 478 mothers between April-May 2021. The sleep-related risk factors, bedsharing and side sleeping, were widely prevalent. 89.5% of respondents indicated that they share a bed with the infant during sleep, 73.0% preferred putting their baby on its side, and 19.9% preferred the prone position. Only 6.7% of respondents described using the safer, supine position. Age of infant was the only factor which was predictive of prone sleeping. Infants > 2 months old were twice as likely to be put to sleep in a prone position compared to infants aged less than 2 months old. Mothers reported that they rarely (24.1%) received advice from medical caregivers to use the supine position. Maternal use of alcohol (12.0%) and tobacco (0.8%) during pregnancy were uncommon.Conclusions: Bedsharing and placing the infant to sleep on the side were commonly reported among the mothers we interviewed. Whether this represents an opportunity to reduce SIDS in Zambia is unclear since accurate data on the burden of SIDS in Zambia is not available. There is a need for increased awareness of SIDS and more prospective data collection on its burden and related risk factors in these African populations. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
25. A firm recommendation: measuring the softness of infant sleep surfaces
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Sheena H. Gillani, Gina S. Lowell, and Kyran P. Quinlan
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SUID ,Soft bedding ,Safe sleep ,Mattress softness ,Mattress firmness ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Approximately 3600 sudden unexpected infant deaths (SUID) occur annually in the United States, and a quarter of SUIDs are caused by unintentional suffocation and strangulation in bed, with soft bedding use being a significant risk factor. Therefore, The American Academy of Pediatrics (AAP) recommends infants sleep on a “firm” surface, though neither an objective definition nor national standard has been established. The purpose of this study is to report on the performance of a device that measures mattress softness and to provide quantitative values of softness for various infant sleep surfaces. Methods In collaboration with the authors and a national child product safety organization (Kids in Danger), University of Michigan engineering students designed and validated a device that measures the vertical depression (softness) of a simulated 2-month-old’s head on a sleep surface. A total of 17 infant sleep surfaces − 14 household surfaces and 3 hospital mattresses - were measured between April 2019 and January 2020. The average softness of each surface was calculated. Surfaces were also measured with soft bedding, which included an infant fleece blanket, and firm and soft pillows. Results The average softness for the 14 household sleep surfaces ranged from 7.4–36.9 mm. The 2019 cribette playard and the 2018 infant spring had similar softness (21 mm) as the 2018 and 2019 adult foam and 2015 sofa. An infant’s fleece blanket folded once added an additional 2.3–6.5 mm of softness, folded twice added 4.8–11.6 mm, and folded three times added 11–21.8 mm. Using a firm pillow added 4.0–20.9 mm of softness while using a soft pillow added 24.5–46.4 mm. The softness for the 3 hospital sleep surfaces ranged from 14 to 36.9 mm, with the infant bassinet being the firmest and the pediatrics mattress being the softest. Conclusions We found a wide range of softness among sleep surfaces, with some infant mattresses as soft as some adult mattresses. Adding blankets and pillows to mattresses measurably increased softness. Quantifying sleep surface softness will advance our understanding of how softness relates to SUID risk. We hope this new information will further inform safe infant sleep recommendations and improve mattress safety standards nationally.
- Published
- 2021
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26. A pUL25 dimer interfaces the pseudorabies virus capsid and tegument
- Author
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Liu, Yun-Tao, Jiang, Jiansen, Bohannon, Kevin Patrick, Dai, Xinghong, Luxton, GW Gant, Hui, Wong Hoi, Bi, Guo-Qiang, Smith, Gregory Allan, and Zhou, Z Hong
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,Sexually Transmitted Infections ,Infectious Diseases ,Infection ,Cryoelectron Microscopy ,Herpesvirus 1 ,Suid ,Imaging ,Three-Dimensional ,Protein Binding ,Protein Multimerization ,Viral Structural Proteins ,Virion ,CryoEM ,pseudorabies virus ,tegument proteins ,pUL25 dimer ,pUL36 ,pUL17 ,Agricultural and Veterinary Sciences ,Medical and Health Sciences ,Virology ,Agricultural ,veterinary and food sciences ,Biological sciences ,Biomedical and clinical sciences - Abstract
Inside the virions of α-herpesviruses, tegument protein pUL25 anchors the tegument to capsid vertices through direct interactions with tegument proteins pUL17 and pUL36. In addition to promoting virion assembly, both pUL25 and pUL36 are critical for intracellular microtubule-dependent capsid transport. Despite these essential roles during infection, the stoichiometry and precise organization of pUL25 and pUL36 on the capsid surface remain controversial due to the insufficient resolution of existing reconstructions from cryo-electron microscopy (cryoEM). Here, we report a three-dimensional (3D) icosahedral reconstruction of pseudorabies virus (PRV), a varicellovirus of the α-herpesvirinae subfamily, obtained by electron-counting cryoEM at 4.9 Å resolution. Our reconstruction resolves a dimer of pUL25 forming a capsid-associated tegument complex with pUL36 and pUL17 through a coiled coil helix bundle, thus correcting previous misinterpretations. A comparison between reconstructions of PRV and the γ-herpesvirus Kaposi's sarcoma-associated herpesvirus (KSHV) reinforces their similar architectures and establishes important subfamily differences in the capsid-tegument interface.
- Published
- 2017
27. Compartmented neuronal cultures reveal two distinct mechanisms for alpha herpesvirus escape from genome silencing.
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Koyuncu, Orkide, MacGibeny, Margaret, Hogue, Ian, and Enquist, Lynn
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Animals ,Cells ,Cultured ,Gene Expression Regulation ,Viral ,Gene Silencing ,Genome ,Viral ,Herpesvirus 1 ,Human ,Herpesvirus 1 ,Suid ,Neurons ,Swine ,Viral Proteins ,Virus Latency ,Virus Replication - Abstract
Alpha herpesvirus genomes encode the capacity to establish quiescent infections (i.e. latency) in the peripheral nervous system for the life of their hosts. Multiple times during latency, viral genomes can reactivate to start a productive infection, enabling spread of progeny virions to other hosts. Replication of alpha herpesviruses is well studied in cultured cells and many aspects of productive replication have been identified. However, many questions remain concerning how a productive or a quiescent infection is established. While infections in vivo often result in latency, infections of dissociated neuronal cultures in vitro result in a productive infection unless lytic viral replication is suppressed by DNA polymerase inhibitors or interferon. Using primary peripheral nervous system neurons cultured in modified Campenot tri-chambers, we previously reported that reactivateable, quiescent infections by pseudorabies virus (PRV) can be established in the absence of any inhibitor. Such infections were established in cell bodies only when physically isolated axons were infected at a very low multiplicity of infection (MOI). In this report, we developed a complementation assay in compartmented neuronal cultures to investigate host and viral factors in cell bodies that prevent establishment of quiescent infection and promote productive replication of axonally delivered genomes (i.e. escape from silencing). Stimulating protein kinase A (PKA) signaling pathways in isolated cell bodies, or superinfecting cell bodies with either UV-inactivated PRV or viral light particles (LP) promoted escape from genome silencing and prevented establishment of quiescent infection but with different molecular mechanisms. Activation of PKA in cell bodies triggers a slow escape from silencing in a cJun N-terminal kinase (JNK) dependent manner. However, escape from silencing is induced rapidly by infection with UVPRV or LP in a PKA- and JNK-independent manner. We suggest that viral tegument proteins delivered to cell bodies engage multiple signaling pathways that block silencing of viral genomes delivered by low MOI axonal infection.
- Published
- 2017
28. The African swine fever threat to Australia
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Michael P. Ward
- Subjects
African swine fever virus ,biosecurity ,epidemiology ,pig ,risk assessment ,suid ,Microbiology ,QR1-502 - Abstract
African swine fever (ASF) is not a new disease: its impact on domestic pig production in Africa was first documented 100 years ago. For most of the twentieth century ASF was considered a disease of Africa, with occasional incursions into Europe and the western hemisphere. However, during the past two decades, ASF has emerged as a truly global diseases, invading parts of Europe and spreading throughout Asia. By 2020, ASF had spread as far as Papua New Guinea. Why ASF has spread such distances so quickly is not well understood, however the movement of both live pigs and pork products undoubtedly is a major contributing factor. The role that wild pigs play in the spread and maintenance of ASF virus is a topic of ongoing debate. Adding to the complexity of the epidemiology of this disease, ASF virus can be transmitted by some tick species in particular ecosystems. Australia is vulnerable to an ASF virus incursion. The threat is further heightened by the uncertainty regarding whether our large and widely distributed feral pig population would become endemically infected, creating a barrier to eradication of the disease. Preventing an incursion of ASF virus relies on ongoing risk assessments based on where the virus currently exists, and the disease pathways for introduction. Within the Australian context, regulatory enforcement and surveillance of illegally important pork products is paramount to minimise the treat that ASF poses.
- Published
- 2022
29. Breastfeeding Without Bed-Sharing
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Kellams, Ann and Moon, Rachel Y., editor
- Published
- 2020
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30. Supine (Back) Sleep Position
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Colvin, Bryanne N., Colson, Eve R., and Moon, Rachel Y., editor
- Published
- 2020
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31. Why This Book Is Important
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Hanke, Samuel and Moon, Rachel Y., editor
- Published
- 2020
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32. Special Situations: Co-occurring Health Conditions
- Author
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Goodstein, Michael and Moon, Rachel Y., editor
- Published
- 2020
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33. Genetic Factors Underlying Sudden Infant Death Syndrome
- Author
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Keywan C, Poduri AH, Goldstein RD, and Holm IA
- Subjects
sids ,suid ,sudden infant death ,gene ,genetic ,review ,Medicine (General) ,R5-920 ,Genetics ,QH426-470 - Abstract
Christine Keywan,1 Annapurna H Poduri,1– 5 Richard D Goldstein,1,6,7 Ingrid A Holm1,6,8 1Robert’s Program for Sudden Unexpected Death in Pediatrics, Boston Children’s Hospital, Boston, MA, USA; 2F.M. Kirby Neurobiology Center, Boston Children’s Hospital, Boston, MA, USA; 3Epilepsy Genetics Program, Department of Neurology, Boston Children’s Hospital and Harvard Medical School, Boston, MA, USA; 4Broad Institute of MIT and Harvard, Cambridge, MA, USA; 5Department of Neurology, Harvard Medical School, Boston, MA, USA; 6Department of Pediatrics, Harvard Medical School, Boston, MA, USA; 7Division of General Pediatrics, Department of Pediatrics, Boston Children’s Hospital, Boston, MA, USA; 8Division of Genetics and Genomics, Department of Pediatrics, and Manton Center for Orphan Diseases Research, Boston Children’s Hospital, Boston, MA, USACorrespondence: Ingrid A HolmBoston Children’s Hospital, Division of Genetics and Genomics, 3 Blackfan Circle, Mailstop BCH3150, Boston, MA 02115, USAEmail ingrid.holm@childrens.harvard.eduAbstract: Sudden Infant Death syndrome (SIDS) is a diagnosis of exclusion. Decades of research have made steady gains in understanding plausible mechanisms of terminal events. Current evidence suggests SIDS includes heterogeneous biological conditions, such as metabolic, cardiac, neurologic, respiratory, and infectious conditions. Here we review genetic studies that address each of these areas in SIDS cases and cohorts, providing a broad view of the genetic underpinnings of this devastating phenomenon. The current literature has established a role for monogenic genetic causes of SIDS mortality in a subset of cases. To expand upon our current knowledge of disease-causing genetic variants in SIDS cohorts and their mechanisms, future genetic studies may employ functional assessments of implicated variants, broader genetic tests, and the inclusion of parental genetic data and family history information.Keywords: SIDS, SUID, sudden infant death, gene, genetic, review
- Published
- 2021
34. Barriers to consistent and reliable investigation of sudden unexpected infant death: Perspectives from law enforcement.
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Snippen, Jennifer R., Cheyney, Melissa, and Drake, Stacy A.
- Subjects
- *
SUDDEN infant death syndrome , *LAW enforcement , *LAW enforcement officials , *THEMATIC analysis , *HOMICIDE investigation , *PROOF & certification of death - Abstract
Despite persistent efforts to advance infant death investigation, most sudden unexpected infant deaths (SUIDs) remain unexplained. Law enforcement officials contribute to SUID investigations throughout the United States, but their impacts on these investigations have not been adequately examined. In this exploratory study, 26 law enforcement officials were interviewed about their experiences and perspectives with SUID investigations. Thematic analysis of qualitative data revealed three specific difficulties law enforcement encounter during SUID investigations: (1) inadequate preparation; (2) overwhelming emotions; and (3) a victim–suspect dilemma. Findings indicate that these barriers may inhibit consistent and reliable investigation of infant death and, therefore, may impede the cause and manner of death determinations. Participants' narratives also offered insights into potential solutions, including expanded SUID training for law enforcement and use of checklists, such as the Sudden Unexpected Infant Death Investigation Reporting Form. The impacts of overwhelming emotions confronted during SUID investigation warrant further study. The victim–suspect dilemma stems from the inability of law enforcement to conclusively eliminate the possibility of homicide. This dilemma may be resolved through a clear distinction between interactions with potential evidence and interactions with the family. Law enforcement must be trained to treat all SUID families in a compassionate and non‐accusatory manner, while investigating all SUID with careful attention to detail that is essential in any potential homicide investigation. A consistent, meticulous, and compassionate approach to SUID investigations will improve the reliability of information obtained and offer the best opportunity for providing answers to grieving parents. [ABSTRACT FROM AUTHOR]
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- 2022
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35. Developmental changes in cardiac expression of KCNQ1 and SCN5A spliceoforms: Implications for sudden unexpected infant death.
- Author
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Williams, Alexandra F., Bryan, Audra F., Tomasek, Kelsey, Fulmer, Carlos A., Gregory, Kyle, Bozeman, Cole, Li, Feng, Absi, Tarek S., Su, Yan Ru, and Kannankeril, Prince J.
- Abstract
Background: Sudden unexpected infant death (SUID) occurs unpredictably and remains unexplained after scene investigation and autopsy. Approximately 1 in 7 cases of SUID can be related to a cardiac cause, and developmental regulation of cardiac ion channel genes may contribute to SUID.Objective: The goal of this study was to investigate the developmental changes in the spliceoforms of SCN5A and KCNQ1, 2 genes implicated in SUID.Methods: Using reverse transcription quantitative real-time polymerase chain reaction, we quantified expression of SCN5A (adult and fetal) and KCNQ1 (KCNQ1a and b) spliceoforms in 153 human cardiac tissue samples from decedents that succumbed to SUID ("unexplained") and other known causes of death ("explained noncardiac").Results: There is a stepwise increase in the adult/fetal SCN5A spliceoform ratio from <2 months (4.55 ± 0.36; n = 51) through infancy and into adulthood (17.41 ± 3.33; n = 5). For KCNQ1, there is a decrease in the ratio of KCNQ1b to KCNQ1a between the <2-month (0.37 ± 0.02; n = 46) and the 2- to 4-month (0.28 ± 0.02; n = 52) age groups. When broken down by sex, race, or cause of death, there were no differences in SCN5A or KCNQ1 spliceoform expression, except for a higher ratio of KCNQ1b to KCNQ1a at 5-12 months of age for SUID females (0.40 ± 0.04; n = 9) than for males (0.25 ± 0.03; n = 6) and at <2 months of age for SUID white (0.42 ± 0.03; n = 19) than for black (0.33 ± 0.05; n = 9) infants.Conclusion: This study documents the developmental changes in SCN5A and KCNQ1 spliceoforms in humans. Our data suggest that spliceoform expression ratios change significantly throughout the first year of life. [ABSTRACT FROM AUTHOR]- Published
- 2022
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36. Racial and ethnic disparities of sudden unexpected infant death in large US cities: a descriptive epidemiological study.
- Author
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Boyer, Brett T., Lowell, Gina S., Roehler, Douglas R., and Quinlan, Kyran P.
- Subjects
SUDDEN death ,HEALTH services accessibility ,RESEARCH methodology ,RACE ,HEALTH status indicators ,ETHNIC groups ,EPIDEMIOLOGICAL research ,CHILDREN - Abstract
Background: Sudden unexpected infant death (SUID) accounts for ~ 3400 deaths per year in the USA, and minimal progress has been made in reducing SUID over the past two decades. SUID is the sudden death of an infant that has occurred as a result of accidental suffocation in a sleeping environment, SIDS (sudden infant death syndrome), or from an unknown cause of death. Nationally, non-Hispanic Black (NHB) infants have twice the risk of SUID compared to non-Hispanic White (NHW) infants. In Chicago, this disparity is greatly magnified. To explore whether this disparity is similarly seen in other large cities, we analyzed SUIDs by race and ethnicity for a seven-year period from the 10 most populous US cities. SUID case counts by race and ethnicity were obtained for 2011–2017 from the 10 most populous US cities based on 2010 census data. For each city, we calculated average annual SUID rates (per 1000 live births) by race and ethnicity, allowing calculation of disparity rate ratios. Findings: Nationally, from 2011 through 2017, there were 0.891 SUIDs per 1000 live births, with a rate of 0.847 for NHWs, 1.795 for NHBs, and 0.522 for Hispanics. In most study cities, the NHB and Hispanic SUID rates were higher than the corresponding national rate. Hispanic SUID rates were higher than NHW rates in 9 of the 10 largest cities. In every study city, the NHW SUID rate was lower than the national NHW rate. In Chicago, NHB infants had a SUID rate 12.735 times that of NHW infants. Conclusion: With few exceptions, the 10 largest US cities had higher NHB and Hispanic SUID rates, but lower NHW SUID rates, compared to the corresponding rates at the national level. Unlike the national pattern, Hispanic SUID rates were higher than NHW rates in 9 of the 10 largest cities. Prevention is currently hampered by the lack of detailed, accurate, and timely information regarding the circumstances of these tragic deaths. A national SUID surveillance system would allow greater understanding of the factors that lead to this disproportionately distributed and enduring cause of infant death. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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37. Improving infant sleep safety via electronic health record communication: a randomized controlled trial
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Ethan A. Canty, Benjamin N. Fogel, Erich K. Batra, Eric W. Schaefer, Jessica S. Beiler, and Ian M. Paul
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SIDS ,SUID ,HER ,Electronic health record ,Patient portals ,Photograph ,Pediatrics ,RJ1-570 - Abstract
Abstract Background With increased use of telehealth, interventions to improve infant sleep environments have not been explored. This study sought to assess the feasibility and efficacy of using electronic health record patient portals to transmit photographs of infant sleep between mothers and healthcare professionals as part of an intervention to promote sleep environments consistent with AAP guidelines. Methods One hundred eighty-four mother-newborn dyads consented to participate in a randomized trial requiring patient portal registration within 1 month of delivery. We first assessed feasibility as measured by a) the proportion of consented mothers enrolling in the portal and b) maternal adherence to prompts to submit photographs of their infant sleeping to the research team through the patient portal. Intervention group mothers were prompted at 1 and 2 months; controls were prompted only at 2 months. Efficacy was determined via research assistant review of submitted photographs. These assistants were trained to detect sudden unexplained infant death risk factors utilizing AAP guidelines. Standardized feedback was returned to mothers through the patient portal. We used Fisher’s Exact test to assess group differences in guideline adherence at 2 months. Results One hundred nine mothers (59%) enrolled in the patient portal and were randomized to intervention (N = 55) and control (N = 54) groups. 21 (38, 95% CI 25–52%) intervention group participants sent photographs at 1 month and received personalized feedback. Across both groups at 2 months, 40 (37, 95% CI 28–46%) sent photographs; 56% of intervention group participants who submitted photographs met all safe sleep criteria compared with 46% of controls (difference 0.10, 95% CI − 0.26 to 0.46, p = .75). Common reasons for guideline non-adherence were sleeping in a room without a caregiver (43%), loose bedding (15%) and objects (8%) on the sleep surface. Conclusions Utilizing the patient portal to individualize safe infant sleep is possible, however, we encountered numerous barriers in this trial to assess its effects on promoting safe infant sleep. Photographs of infants sleeping showed substantial non-adherence to AAP guidelines, suggesting further needs for improvement to promote safe infant sleep practices. Trial registration Name: Improving Infant Sleep Safety With the Electronic Health Record; Clinicaltrials.gov: NCT03662048 ; Date of Registration: September 7, 2018; Data Sharing Statement: None
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- 2020
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38. The Science (or Nonscience) of Research Into Sudden Infant Death Syndrome (SIDS)
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Paul Nathan Goldwater
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Sudden Infant Death Syndrome ,SIDS ,Sudden Unexplained Infant Death ,SUID ,pathology ,epidemiology ,Pediatrics ,RJ1-570 - Abstract
This Viewpoint paper presents a timely and constructive critique of mainstream SIDS research. It is concerning that twenty-first century medical science has not provided an answer to the tragic enigma of SIDS. The paper helps explain why this is so and illustrates possible shortcomings in the investigation of Sudden Infant Death Syndrome/Sudden Unexplained Infant Death (SIDS/SUID) by mainstream researchers. Mainstream findings are often based on questionable and dogmatic assumptions that return to founding notions such as the Triple Risk Hypothesis and the contention that the mechanisms underlying SIDS/SUID are heterogeneous in nature. The paper illustrates how the pathological findings in SIDS have been under-investigated (or ignored) and that key epidemiological risk factors have slipped from memory. This apparent amnesia has resulted in failure to use these established SIDS facts to substantiate the significance of various neuropathological, neurochemical, or other research findings. These unsupported findings and their derivative hypotheses are therefore ill-founded and lack scientific rigor.ConclusionThe deficits of SIDS “science” revealed in this paper explain why the SIDS enigma has not yet been solved. To make progress in understanding SIDS, it is important that researchers, as scientists, uphold standards of research. Encouragement for new directions of research is offered.
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- 2022
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39. Characterization of novel transcripts in pseudorabies virus.
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Tombácz, Dóra, Csabai, Zsolt, Oláh, Péter, Havelda, Zoltán, Sharon, Donald, Snyder, Michael, and Boldogkői, Zsolt
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Herpesvirus 1 ,Suid ,RNA ,Viral ,Gene Expression Profiling ,Virus Replication ,Transcription ,Genetic ,High-Throughput Nucleotide Sequencing ,Real-Time Polymerase Chain Reaction ,DNA replication ,RNA sequencing ,herpesvirus ,non-coding RNA ,pseudorabies virus ,Herpesvirus 1 ,Suid ,RNA ,Viral ,Transcription ,Genetic ,Microbiology - Abstract
In this study we identified two 3'-coterminal RNA molecules in the pseudorabies virus. The highly abundant short transcript (CTO-S) proved to be encoded between the ul21 and ul22 genes in close vicinity of the replication origin (OriL) of the virus. The less abundant long RNA molecule (CTO-L) is a transcriptional readthrough product of the ul21 gene and overlaps OriL. These polyadenylated RNAs were characterized by ascertaining their nucleotide sequences with the Illumina HiScanSQ and Pacific Biosciences Real-Time (PacBio RSII) sequencing platforms and by analyzing their transcription kinetics through use of multi-time-point Real-Time RT-PCR and the PacBio RSII system. It emerged that transcription of the CTOs is fully dependent on the viral transactivator protein IE180 and CTO-S is not a microRNA precursor. We propose an interaction between the transcription and replication machineries at this genomic location, which might play an important role in the regulation of DNA synthesis.
- Published
- 2015
40. New Fossil Collection of Hippohyus sivalensis (Artiodactyla: Suidae: Suinae) from Late Miocene to Pliocene of Siwaliks of Pakistan.
- Author
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Aslam, Sadaf, Khan, Abdul Majid, and Akhtar, Muhammad
- Abstract
The fossil remains of Hippohyus (Artiodactyla, Mammalia) from the Late Miocene/Pliocene of Middle and Upper Siwaliks are described. Hippohyus sivalensis is a common suid of late Miocene to Pliocene rocks of Tatrot/Hasnot area of Pakistan. The molar resemblance with equids indicates their grazing feeding habits. This species migrated to Potwar land when grasslands became established. It has typical suine characters with hypsodont dentition and complex infolding of enamel surfaces. The described material consists of isolated molars. This discovery will provide a new insight to understand the diversity and geographic distribution of Siwalik Suids. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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41. A firm recommendation: measuring the softness of infant sleep surfaces.
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Gillani, Sheena H., Lowell, Gina S., and Quinlan, Kyran P.
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INFANTS ,ADULTS ,SLEEP ,SUDDEN infant death syndrome ,PRODUCT safety - Abstract
Background: Approximately 3600 sudden unexpected infant deaths (SUID) occur annually in the United States, and a quarter of SUIDs are caused by unintentional suffocation and strangulation in bed, with soft bedding use being a significant risk factor. Therefore, The American Academy of Pediatrics (AAP) recommends infants sleep on a "firm" surface, though neither an objective definition nor national standard has been established. The purpose of this study is to report on the performance of a device that measures mattress softness and to provide quantitative values of softness for various infant sleep surfaces. Methods: In collaboration with the authors and a national child product safety organization (Kids in Danger), University of Michigan engineering students designed and validated a device that measures the vertical depression (softness) of a simulated 2-month-old's head on a sleep surface. A total of 17 infant sleep surfaces − 14 household surfaces and 3 hospital mattresses - were measured between April 2019 and January 2020. The average softness of each surface was calculated. Surfaces were also measured with soft bedding, which included an infant fleece blanket, and firm and soft pillows. Results: The average softness for the 14 household sleep surfaces ranged from 7.4–36.9 mm. The 2019 cribette playard and the 2018 infant spring had similar softness (21 mm) as the 2018 and 2019 adult foam and 2015 sofa. An infant's fleece blanket folded once added an additional 2.3–6.5 mm of softness, folded twice added 4.8–11.6 mm, and folded three times added 11–21.8 mm. Using a firm pillow added 4.0–20.9 mm of softness while using a soft pillow added 24.5–46.4 mm. The softness for the 3 hospital sleep surfaces ranged from 14 to 36.9 mm, with the infant bassinet being the firmest and the pediatrics mattress being the softest. Conclusions: We found a wide range of softness among sleep surfaces, with some infant mattresses as soft as some adult mattresses. Adding blankets and pillows to mattresses measurably increased softness. Quantifying sleep surface softness will advance our understanding of how softness relates to SUID risk. We hope this new information will further inform safe infant sleep recommendations and improve mattress safety standards nationally. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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42. Benchmarking Underwater Image Enhancement and Restoration, and Beyond
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Guojia Hou, Xin Zhao, Zhenkuan Pan, Huan Yang, Lu Tan, and Jingming Li
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Image quality assessment ,full-reference ,no-reference ,underwater IFM ,UISA ,SUID ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Image enhancement and restoration is among the most investigated topics in the field of underwater machine vision. The objective image quality assessment is a fundamental part of optimizing underwater enhancement and restoration technologies. However, most no-reference (NR) metrics are not specifically designed for underwater image quality assessment. Moreover, since the reference (undegraded) images are not available in underwater scenes, the classical full-reference (FR) metrics cannot be used to evaluate underwater image enhancement and restoration methods. In this paper, we first design an underwater image synthesis algorithm (UISA), in which depending on the real-world underwater image, we can produce a synthetic underwater image from an outdoor ground-truth image. Based on this strategy, we establish a new large-scale benchmark that contains ground-truth images and synthetic underwater images of the same scene, called synthetic underwater image dataset (SUID). Our SUID is constructed on the basis of the underwater image formation model (IFM) and characteristics of underwater optical propagation, possessing solid reliability and feasibility. The proposed SUID creates possibility for a FR evaluation of existing technologies for underwater image enhancement and restoration, which is illustrated by performing extensive experiments and quantitative analysis. The SUID is available online at: http://dx.doi.org/10.21227/agdr-y109.
- Published
- 2020
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43. Using Social Vulnerability Indices to Predict Priority Areas for Prevention of Sudden Unexpected Infant Death in Cook County, IL: Cross-Sectional Study.
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Riggins DP, Zhang H, and Trick WE
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- Humans, Cross-Sectional Studies, Retrospective Studies, Infant, Male, Female, Infant, Newborn, Sudden Infant Death prevention & control, Sudden Infant Death epidemiology, Social Vulnerability
- Abstract
Background: The incidence of sudden unexpected infant death (SUID) in the United States has persisted at roughly the same level since the mid-2000s, despite intensive prevention efforts around safe sleep. Disparities in outcomes across racial and socioeconomic lines also persist. These disparities are reflected in the spatial distribution of cases across neighborhoods. Strategies for prevention should be targeted precisely in space and time to further reduce SUID and correct disparities., Objective: We sought to aid neighborhood-level prevention efforts by characterizing communities where SUID occurred in Cook County, IL, from 2015 to 2019 and predicting where it would occur in 2021-2025 using a semiautomated, reproducible workflow based on open-source software and data., Methods: This cross-sectional retrospective study queried geocoded medical examiner data from 2015-2019 to identify SUID cases in Cook County, IL, and aggregated them to "communities" as the unit of analysis. We compared demographic factors in communities affected by SUID versus those unaffected using Wilcoxon rank sum statistical testing. We used social vulnerability indicators from 2014 to train a negative binomial prediction model for SUID case counts in each given community for 2015-2019. We applied indicators from 2020 to the trained model to make predictions for 2021-2025., Results: Validation of our query of medical examiner data produced 325 finalized cases with a sensitivity of 95% (95% CI 93%-97%) and a specificity of 98% (95% CI 94%-100%). Case counts at the community level ranged from a minimum of 0 to a maximum of 17. A map of SUID case counts showed clusters of communities in the south and west regions of the county. All communities with the highest case counts were located within Chicago city limits. Communities affected by SUID exhibited lower median proportions of non-Hispanic White residents at 17% versus 60% (P<.001) and higher median proportions of non-Hispanic Black residents at 32% versus 3% (P<.001). Our predictive model showed moderate accuracy when assessed on the training data (Nagelkerke R2=70.2% and RMSE=17.49). It predicted Austin (17 cases), Englewood (14 cases), Auburn Gresham (12 cases), Chicago Lawn (12 cases), and South Shore (11 cases) would have the largest case counts between 2021 and 2025., Conclusions: Sharp racial and socioeconomic disparities in SUID incidence persisted within Cook County from 2015 to 2019. Our predictive model and maps identify precise regions within the county for local health departments to target for intervention. Other jurisdictions can adapt our coding workflows and data sources to predict which of their own communities will be most affected by SUID., (© Daniel P Riggins, Huiyuan Zhang, William E Trick. Originally published in JMIR Public Health and Surveillance (https://publichealth.jmir.org).)
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- 2024
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44. A Simple and Systematic Approach to Qualitative Data Extraction From Social Media for Novice Health Care Researchers: Tutorial.
- Author
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Pretorius K
- Abstract
Social media analyses have become increasingly popular among health care researchers. Social media continues to grow its user base and, when analyzed, offers unique insight into health problems. The process of obtaining data for social media analyses varies greatly and involves ethical considerations. Data extraction is often facilitated by software tools, some of which are open source, while others are costly and therefore not accessible to all researchers. The use of software for data extraction is accompanied by additional challenges related to the uniqueness of social media data. Thus, this paper serves as a tutorial for a simple method of extracting social media data that is accessible to novice health care researchers and public health professionals who are interested in pursuing social media research. The discussed methods were used to extract data from Facebook for a study of maternal perspectives on sudden unexpected infant death., (©Kelly Pretorius. Originally published in JMIR Formative Research (https://formative.jmir.org), 09.07.2024.)
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- 2024
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45. Factors associated with age of death in sudden unexpected infant death.
- Author
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Allen, Kelty, Anderson, Tatiana M., Chajewska, Urszula, Ramirez, Jan‐Marino, Mitchell, Edwin A., and Ramirez, Jan-Marino
- Subjects
- *
INFANT death , *SUDDEN infant death syndrome , *GESTATIONAL age , *INTENSIVE care units , *NEONATAL intensive care , *RESEARCH , *RESEARCH methodology , *MEDICAL cooperation , *EVALUATION research , *COMPARATIVE studies , *RESEARCH funding , *INFANT mortality , *SMOKING , *ASPHYXIA - Abstract
Aim: This study aimed to systematically analyse the pregnancy, birth and demographic-related factors associated with age of death in sudden unexpected infant death (SUID).Methods: Data were analysed from the Centers for Disease Control and Prevention's Cohort Linked Birth/Infant Death data set (2011-2013; 11 737 930 live births). SUID was defined as deaths from sudden infant death syndrome, ill-defined causes, or accidental suffocation and strangulation in bed. There were 9668 SUID cases (7-364 days; gestation >28 weeks; 0.82/1000 live births). The odds of death at different ages were compared to determine which variables significantly affect the SUID age of death.Results: Forty-three features indicated a significant change in age of death with two main patterns: (a) younger chronologic age at death was associated with maternal smoking and factors associated with lower socio-economic status, and (b) older age was associated with low birthweight, prematurity and admission to the neonatal intensive care unit. However, when age was corrected for gestation, these factors were associated with younger age.Conclusion: Factors that varied with age of death are well-documented risk factors for SUID. The majority of these risk factors were associated with younger age at death after allowing for gestational age at birth. [ABSTRACT FROM AUTHOR]- Published
- 2021
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46. Protocols, practices, and needs for investigating sudden unexpected infant deaths.
- Author
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Cottengim, Carri, Parks, Sharyn, Rhoda, Dale, Andrew, Tom, Nolte, Kurt B., Fudenberg, John, Sens, Mary Ann, Brustrom, Jennifer, Payn, Betsy, and Shapiro-Mendoza, Carrie K.
- Subjects
- *
SUDDEN infant death syndrome , *INFANT death , *FORENSIC pathology , *TRAINING needs , *SOCIAL history , *INVESTIGATION reports - Abstract
Understanding case identification practices, protocols, and training needs of medical examiners and coroners (MEC) may inform efforts to improve cause-of-death certification. We surveyed a U.S.-representative sample of MECs and described investigation practices and protocols used in certifying sudden unexpected infant deaths (SUID). We also identified MEC training and resource needs. Of the 377 respondents, use of the SUID Investigation Reporting Form or an equivalent was 89% for large, 87% for medium, and 52% for small jurisdictions. Routine completion of infant medical history, witness interviews, autopsy, photos or videos, and family social history for infant death investigations was ≥80%, but routine scene re-creation with a doll was 30% in small, 64% in medium, and 59% in large offices. Seventy percent of MECs reported infant death investigation training needs. Increased training and use of standardized practices may improve SUID cause-of-death certification, allowing us to better understand SUID. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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47. Trends in Breastfeeding Interventions, Skin-to-Skin Care, and Sudden Infant Death in the First 6 Days after Birth.
- Author
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Bartick, Melissa, Boisvert, Mary Ellen, Philipp, Barbara L., and Feldman-Winter, Lori
- Abstract
Objective: To determine if implementation of skin-to-skin care and the Baby-Friendly Hospital Initiative (BFHI) contributes to sudden unexpected infant death (SUID) and asphyxia in the first 6 days after birth.Study Design: Survey data were used to determine a correlation between BFHI and deaths from SUID and asphyxia among infants <7 days in the US and Massachusetts. Using data from the Centers for Disease Control and Prevention, implementation of BFHI was tracked from 2004-2016 and skin-to-skin care was tracked from 2007-2015. Using data from Centers for Disease Control and Prevention WONDER and the Massachusetts Department of Public Health, SUID and asphyxia were tracked from 2004-2016.Results: Nationally, births in Baby-Friendly facilities rose from 1.8% to 18.3% and the percentage of facilities in which most dyads experienced skin-to-skin care rose from 40% to 83%. SUID prevalence among infants <7 days was rare (0.72% of neonatal deaths) and decreased significantly from 2004-2009 compared with 2010-2016, from 0.033 per 1000 live births to 0.028, OR 0.85 (95% CI 0.77, 0.94). In Massachusetts, births in Baby-Friendly facilities rose from 2.8% to 13.9% and skin-to-skin care rose from 50% to 97.8%. SUID prevalence decreased from 2010-2016 compared with 2004-2009: OR 0.32 (95% CI 0.13, 0.82), with 0 asphyxia deaths during the 13-year period.Conclusion: Increasing rates of breastfeeding initiatives and skin-to-skin care are temporally associated with decreasing SUID prevalence in the first 6 days after birth in the US and Massachusetts. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
48. Retinal transplants restore visual responses: trans‐synaptic tracing from visually responsive sites labels transplant neurons
- Author
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Seiler, Magdalene J, Thomas, Biju B, Chen, Zhenhai, Wu, Rongjuan, Sadda, Srinivas R, and Aramant, Robert B
- Subjects
Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Neurosciences ,Eye Disease and Disorders of Vision ,Transplantation ,Eye ,Neurological ,Animals ,Animals ,Genetically Modified ,Biomarkers ,Fetal Tissue Transplantation ,Herpesvirus 1 ,Suid ,Humans ,Neurons ,Rats ,Retina ,Staining and Labeling ,Superior Colliculi ,Synapses ,Vision ,Ocular ,Visual Pathways ,Visual Perception ,electrophysiology ,photoreceptor dystrophy ,pseudorabies virus ,rat ,retinal degeneration ,superior colliculus ,Psychology ,Cognitive Sciences ,Neurology & Neurosurgery ,Biological psychology ,Cognitive and computational psychology - Abstract
This study aimed to test the hypothesis that visual responses in the superior colliculus (SC) originate from synaptic connections between fetal retinal transplants and degenerating host retinas. Sheets of embryonic day 19 rat retina expressing human placental alkaline phosphatase were transplanted to the subretinal space of 3- to 4-week-old S334ter-line-3 rats with fast retinal degeneration. Several months later, visual responses were recorded from the SC. Attenuated pseudorabies virus that is specifically transferred between neurons at synapses (strains PRV-152, expressing green fluorescent protein (GFP) or BaBlu, expressing Escherichia colibeta-galactosidase) was injected into the visually responsive site of the SC. After survival times of 1-2 days, the virus was detected in the retina by immunohistochemistry in combination with different retinal cell markers, such as protein kinase C, recoverin, calcium-calmodulin-dependent protein kinase II and glutamine synthetase. Transplanted rats had a mean response threshold of -3.1 log cd/m(2) in a small area of the SC corresponding to the location of the graft in the retina. By 30 h after injection into this SC area, the virus traced back to host ganglion cells overlying the transplant and in close proximity to the transplant. By 2 days after injection, extensive virus label was found in the host retina and many cells in the transplant were also labeled. Virus-labeled cells in the transplant were double labeled for neuronal and glial cell markers. This study provides anatomical evidence that synaptic connections between fetal retinal transplants and host retinas contribute to the visual responses in the SC.
- Published
- 2008
49. Transsynaptic virus tracing from host brain to subretinal transplants
- Author
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Seiler, Magdalene J, Sagdullaev, Botir T, Woch, Gustaw, Thomas, Biju B, and Aramant, Robert B
- Subjects
Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Neurosciences ,Eye Disease and Disorders of Vision ,Transplantation ,Eye ,Neurological ,Animals ,Animals ,Genetically Modified ,Brain ,Embryo ,Mammalian ,Fetal Tissue Transplantation ,Galactosides ,Herpesvirus 1 ,Suid ,Immunohistochemistry ,Indoles ,Mice ,Microscopy ,Electron ,Transmission ,Pigment Epithelium of Eye ,Rats ,Rats ,Inbred Strains ,Rats ,Long-Evans ,Rats ,Sprague-Dawley ,Retina ,Retinal Degeneration ,Synapses ,Time Factors ,electron microscopy ,photoreceptor dystrophy ,retinal degeneration ,retinal transplantation ,virus infection ,Psychology ,Cognitive Sciences ,Neurology & Neurosurgery ,Biological psychology ,Cognitive and computational psychology - Abstract
The aim of this study was to establish synapses between a transplant and a degenerated retina. To tackle this difficult task, a little-known but well-established CNS method was chosen: trans-synaptic pseudorabies virus (PRV) tracing. Sheets of E19 rat retina with or without retinal pigment epithelium (RPE) were transplanted to the subretinal space in 33 Royal College of Surgeons (RCS) and transgenic s334ter-5 rats with retinal degeneration. Several months later, PRV-BaBlu (expressing E. colibeta-galactosidase) or PRV-Bartha was injected into an area of the exposed superior colliculus (SC), topographically corresponding to the transplant placement in the retina. Twenty normal rats served as controls. After survival times of 1-5 days, retinas were examined for virus by X-gal histochemistry, immunohistochemistry and electron microscopy. In normal controls, virus was first seen in retinal ganglion cells and Müller glia after 1-1.5 days, and had spread to all retinal layers after 2-3 days. Virus-labeled cells were found in 16 of 19 transplants where the virus injection had retrogradely labeled the topographically correct transplant area of the host retina. Electron microscopically, enveloped and nonenveloped virus could clearly be detected in infected cells. Enveloped virus was found only in neurons. Infected glial cells contained only nonenveloped virus. Neurons in retinal transplants are labeled after PRV injection into the host brain, indicating synaptic connectivity between transplants and degenerated host retinas. This study provides evidence that PRV spreads in the retina as in other parts of the CNS and is useful to outline transplant-host circuitry.
- Published
- 2005
50. Integrating palaeocaves into palaeolandscapes: An analysis of cave levels and karstification history across the Gauteng Malmani dolomite, South Africa.
- Author
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Herries, Andy I.R., Adams, Justin W., Joannes-Boyau, Renaud, Armstrong, Brian, Baker, Stephanie, F. Blackwood, Alex, Boschian, Giovanni, V. Caruana, Matt, Penzo-Kajewski, Paul, Murszewski, Ashleigh, and S. Rovinsky, Douglass
- Subjects
- *
FOSSIL hominids , *SPELEOTHEMS , *DOLOMITE , *GEOLOGICAL modeling , *ELECTRON spin resonance dating , *CAVES - Abstract
The Drimolen Palaeocave System in the 'Fossil Hominid Sites of South Africa' UNESCO World Heritage Site is well known for numerous remains of early hominins such as Paranthropus robustus and early Homo. These hominin fossils, along with bone tools and notably diverse accumulation of non-hominin primates and fauna, have all been excavated from the 'Main Quarry' area of the site where extensive lime-mining took place. Here we report the first radiometric age of 1.712 ± 0.269 Ma for hominin bearing deposits associated with the DNH7 Paranthropus robustus cranium in the Main Quarry area of the site, which is consistent with recent biochronological estimates. This age is similar to recent estimates for Swartkrans Member 1 Hanging Remnant (somewhere between 2.3 and 1.8 Ma) which also contains Paranthropus and early Homo. Simultaneously, we integrate the newly radiometrically dated Main Quarry deposits with a new fossil deposit, the Drimolen Makondo, discovered in 2013, that is situated some 50 m up the hill to the west from the Main Quarry. It has experienced only limited disturbance from mining but much more extensive erosion. Preliminary excavations and analysis have revealed that the Makondo infill is older than the Main Quarry, dating to 2.706 ± 0.428 Ma. Its greater age is confirmed by biochronology. The Makondo thus overlap with the suggested end of deposition of Australopithecus bearing Sterkfontein deposits, although it is yet to yield any hominin remains. These new dates for the two Drimolen Palaeocave System deposits indicates that, contrary to prior age estimates, the Drimolen site as a whole records the critical hominin and faunal turnover in South African palaeocommunities that occurred around 2.3–1.7 Ma. Finally, as the Drimolen Makondo represents a rare example of a pre-2 Ma fossil bearing deposit in the Gauteng exposures of the Malmani dolomite, we also integrate our results into the greater South African record of palaeodeposit formation (most of which occur between ∼2.0 and 1.0 Ma). An analysis of the age of palaeocave infillings across the Malmani dolomite suggests that, as is classically the case with karst, the height within the dolomite is broadly correlated to their age, although with some notable exceptions that are likely related to localised geological features. Our analysis also indicates that most caves have undergone some form of secondary karstification related to a younger phase of cave formation, contrasting with models that suggest the cavities all formed at the same time and that infill is related to erosion and the opening up of cave passages. As such, the reason that few pre-2 Ma deposits have been identified in the Gauteng exposures of the Malmani dolomite is probably because these older caves have been eroded away. Identifying such early caves is critical in understanding whether earlier hominins may have once existed in South Africa or if erosion of older deposits (or an absence of speleogenesis at this time) has made such early periods absent from the geological record. • The first radiometric age (∼ <2.0->1.4Ma) for the DNH7 Paranthropus robustus cranium. • Describes a new older fossil deposit (∼<3.1->2.3 Ma) from Drimolen. • An age for the first documented overlap of two species of Dinofelis in S. Africa. • A new model for cave formation in the Cradle of Humankind (S. Africa). • A model for understanding geological bias in the S. African hominin record. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
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