300 results on '"Thompson, L. M."'
Search Results
2. Amapari Marker Band, Gale Crater, Mars: Event Horizon With Highest Bedrock Iron and Zinc Concentrations Detected by Curiosity's Alpha Particle X‐Ray Spectrometer.
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Thompson, L. M., Spray, J. G., VanBommel, S. J., O'Connell‐Cooper, C. D., Berger, J. A., Gellert, R., Vasavada, A. R., Gupta, S., Yen, A. S., McCraig, M. A., and Boyd, N. I.
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Alpha Particle X‐ray spectrometer (APXS) analyses of the distinct Amapari Marker Band (AMB), Gale crater, Mars reveal the highest, in situ, FeO and Zn abundances (47.51, 2.23 wt%), and elevated MnO associated with a lower rippled unit. APXS analyses also reveal a marked shift in provenance, to a generally basaltic composition, compared to the underlying Mg‐sulfate‐bearing strata, which persists into the overlying stratigraphy. The AMB also records perturbation in the MgSO4‐forming conditions present above and below. AMB chemistry could be consistent with a volcanic ash source; high metal concentrations resulting from volatile reactions within an ash cloud. Alternatively, syn‐ and/or post‐depositional precipitation processes within a primary lake setting and/or a later diagenetic event or events may have played a role. Ongoing and future work will aim to further constrain processes responsible for deposition of the AMB, the high metal concentrations and its regional and global implications. Plain Language Summary: The Amapari Marker Band (AMB) at Gale crater forms a distinct, dark‐toned, resistant horizon identified from orbit within rock layers of the Mg‐sulfate‐bearing, central mound. Curiosity recently investigated the AMB and found a lower rippled layer, consistent with a shallow lake, contrasting with windblown sediment deposition above and below it. Analysis of the AMB by the Alpha Particle X‐ray spectrometer also revealed a marked change in the chemistry of the rocks, with the highest in situ FeO and Zn abundances measured on Mars, elevated MnO, and a composition consistent with input of different sediment compared to underlying rocks. The change in bulk chemistry persists into the overlying rocks indicating that the AMB marks a significant event in the evolution of Gale crater, and possibly beyond. The AMB may record deposition of basaltic volcanic ash into a lake; the high metal concentrations resulting from gas reactions within an ash cloud. Alternatively, the high metals may be the result of water/sediment interactions: either in the lake, and/or after deposition and possibly after becoming a solid rock. Ongoing and future work will aim to further constrain processes responsible for deposition of the AMB, the high metal concentrations and its regional and global implications. Key Points: APXS analysis reveals a marked change in chemistry and provenance associated with the Amapari Marker Band, Gale craterHighest in situ iron and zinc, and elevated manganese detected by APXS within the Amapari Marker BandThe Amapari Marker Bands marks a significant event in the evolution of Gale crater, and possibly beyond [ABSTRACT FROM AUTHOR]
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- 2024
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3. A Scoping Review of Dietary Factors Conferring Risk or Protection for Cognitive Decline in APOE ε4 Carriers
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Fote, Gianna M., Geller, N. R., Reyes-Ortiz, A. M., Thompson, L. M., Steffan, J. S., and Grill, Joshua D.
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- 2021
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4. Mineralogical Investigation of Mg‐Sulfate at the Canaima Drill Site, Gale Crater, Mars
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Chipera, S. J., primary, Vaniman, D. T., additional, Rampe, E. B., additional, Bristow, T. F., additional, Martínez, G., additional, Tu, V. M., additional, Peretyazhko, T. S., additional, Yen, A. S., additional, Gellert, R., additional, Berger, J. A., additional, Rapin, W., additional, Morris, R. V., additional, Ming, D. W., additional, Thompson, L. M., additional, Simpson, S., additional, Achilles, C. N., additional, Tutolo, B., additional, Downs, R. T., additional, Fraeman, A. A., additional, Fischer, E., additional, Blake, D. F., additional, Treiman, A. H., additional, Morrison, S. M., additional, Thorpe, M. T., additional, Gupta, S., additional, Dietrich, W. E., additional, Downs, G., additional, Castle, N., additional, Craig, P. I., additional, Marais, D. J. Des, additional, Hazen, R. M., additional, Vasavada, A. R., additional, Hausrath, E., additional, Sarrazin, P., additional, and Grotzinger, J. P., additional
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- 2023
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5. Concentrations and Yields of Mercury, Methylmercury, and Dissolved Organic Carbon From Contrasting Catchments in the Discontinuous Permafrost Region, Western Canada
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Thompson, L. M., primary, Low, M., additional, Shewan, R., additional, Schulze, C., additional, Simba, M., additional, Sonnentag, O., additional, Tank, S. E., additional, and Olefeldt, D., additional
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- 2023
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6. Faulty neuronal determination and cell polarization are reverted by modulating HD early phenotypes
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Conforti, P., Besusso, D., Bocchi, V. D., Faedo, A., Cesana, E., Rossetti, G., Ranzani, V., Svendsen, C. N., Thompson, L. M., Toselli, M., Biella, G., Pagani, M., and Cattaneo, E.
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- 2018
7. Effects of Cooking with Liquefied Petroleum Gas or Biomass on Stunting in Infants.
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Checkley, W., Thompson, L. M., Sinharoy, S. S., Hossen, S., Moulton, L. H., Chang, H. H., Waller, L., Steenland, K., Rosa, G., Mukeshimana, A., Ndagijimana, F., McCracken, J. P., Díaz-Artiga, A., Balakrishnan, K., Garg, S. S., Thangavel, G., Aravindalochanan, V., Hartinger, S. M., Chiang, M., and Kirby, M. A.
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BACKGROUND: Household air pollution is associated with stunted growth in infants. Whether the replacement of biomass fuel (e.g., wood, dung, or agricultural crop waste) with liquefied petroleum gas (LPG) for cooking can reduce the risk of stunting is unknown. METHODS: We conducted a randomized trial involving 3200 pregnant women 18 to 34 years of age in four low- and middle-income countries. Women at 9 to less than 20 weeks' gestation were randomly assigned to use a free LPG cookstove with continuous free fuel delivery for 18 months (intervention group) or to continue using a bio-mass cookstove (control group). The length of each infant was measured at 12 months of age, and personal exposures to fine particulate matter (particles with an aerodynamic diameter of 32.5 Bm) were monitored starting at pregnancy and continuing until the infants were 1 year of age. The primary outcome for which data are presented in the current report - stunting (defined as a length - for -age z score that was more than two standard deviations below the median of a growth standard) at 12 months of age - was one of four primary outcomes of the trial. Intention-to-treat analyses were performed to estimate the relative risk of stunting. RESULTS: Adherence to the intervention was high, and the intervention resulted in lower prenatal and postnatal 24-hour personal exposures to fine particulate matter than the control (mean prenatal exposure, 35.0 Bg per cubic meter vs. 103.3 Bg per cubic meter; mean postnatal exposure, 37.9 Ag per cubic meter vs. 109.2 Bg per cubic meter). Among 3061 live births, 1171 (76.2°/0) of the 1536 infants born to women in the intervention group and 1186 (77.896) of the 1525 infants born to women in the control group had a valid length measurement at 12 months of age. Stunting occurred in 321 of the 1171 infants included in the analysis (27.4°/o) of the infants born to women in the intervention group and in 299 of the 1186 infants included in the analysis (25.2°6) of those born to women in the control group (relative risk, 1.10; 98.75°6 confidence interval, 0.94 to 1.29; P=0.12). CONCLUSIONS: An intervention strategy starting in pregnancy and aimed at mitigating household air pollution by replacing biomass fuel with LPG for cooking did not reduce the risk of stunting in infants. (Funded by the National Institutes of Health and the Bill and Melinda Gates Foundation; HAITIN ClinicalTrials.gov number, NCT02944682). [ABSTRACT FROM AUTHOR]
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- 2024
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8. Identification of combinatorial drug regimens for treatment of Huntington's disease using Drosophila
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Agrawal, N, Pallos, J, Slepko, N, Apostol, B L, Bodai, L, Chang, L W, Chiang, A S, Thompson, L M, and Marsh, J L
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combinatorial treatments ,neurodegeneration - Abstract
We explore the hypothesis that pathology of Huntington's disease involves multiple cellular mechanisms whose contributions to disease are incrementally additive or synergistic. We provide evidence that the photoreceptor neuron degeneration seen in flies expressing mutant human huntingtin correlates with widespread degenerative events in the Drosophila CNS. We use a Drosophila Huntington's disease model to establish dose regimens and protocols to assess the effectiveness of drug combinations used at low threshold concentrations. These proof of principle studies identify at least two potential combinatorial treatment options and illustrate a rapid and cost-effective paradigm for testing and optimizing combinatorial drug therapies while reducing side effects for patients with neurodegenerative disease. The potential for using prescreening in Drosophila to inform combinatorial therapies that are most likely to be effective for testing in mammals is discussed.
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- 2005
9. Aqueous Processes and Microbial Habitability of Gale Crater Sediments from the Blunts Point to the Glenn Torridon Clay Unit
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Sutter, Brad, Mcadam, Amy C, Achilles, Cherie N, Rampe, Elizabeth B, Archer, Paul D, Thompson, L. M, Ming, Douglas W, Stern, Jennifer C, House, C. H, Navarro-Gonzalez, R, Millan, Maeva M, and Eigenbrode, Jennifer L
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Lunar And Planetary Science And Exploration - Abstract
A driving factor for sending the Mars Science Laboratory, Curiosity rover to Gale Crater was the orbital detection of clay minerals in the Glen Torridon (GT) clay unit. Clay mineral detections in GT suggested a past aqueous environment that was habitable, and could contain organic evidence of past microbiology. The mission of the Sample Analysis at Mars (SAM) instrument onboard Curiosity was to detect organic evidence of past microbiology and to detect volatile bearing mineralogy that can inform on whether past geochemical conditions would have supported microbiological activity. The objective of this work was to 1) evaluate the depositional/alteration conditions of Blunt’s Point (BP) to GT sediments 2) search for evidence of organics, and 3) evaluate microbial habitability in the BP, Vera Rubin Ridge (VRR), and GT sedimentary rock.
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- 2020
10. A cell-based assay for aggregation inhibitors as therapeutics of polyglutamine-repeat disease and validation in Drosophila
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Apostol, B L, Kazantsev, A, Raffioni, S, Illes, K, Pallos, J, Bodai, L, Slepko, N, Bear, J E, Gertler, F B, Hersch, S, Housman, D E, Marsh, J L, and Thompson, L M
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The formation of polyglutamine-containing aggregates and inclusions are hallmarks of pathogenesis in Huntington's disease that can be recapitulated in model systems. Although the contribution of inclusions to pathogenesis is unclear, cell-based assays can be used to screen for chemical compounds that affect aggregation and may provide therapeutic benefit. We have developed inducible PC12 cell-culture models to screen for loss of visible aggregates. To test the validity of this approach, compounds that inhibit aggregation in the PC12 cell-based screen were tested in a Drosophila model of polyglutamine-repeat disease. The disruption of aggregation in PC12 cells strongly correlates with suppression of neuronal degeneration in Drosophila. Thus, the engineered PC12 cells coupled with the Drosophila model provide a rapid and effective method to screen and validate compounds.
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- 2003
11. Understanding Martian Alteration Processes by Comparing In-Situ Chemical Measurements from Multiple Landing Sites
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Yen, A. S, Gellert, R, Morris, R. V, Ashley, J. W, Berger, J. A, Clark, B. C, Cohen, B. A, Ming, D. W, Mittlefehldt, D. W, O’Connell-Cooper, C. D, Salvatore, M, Schmidt, M. E, Schröder, C, Thompson, L. M, and VanBommel, S. J
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Lunar And Planetary Science And Exploration - Abstract
Characterizing the history of aqueous activity at the martian surface has been an objective of the Mars Exploration Rovers (MER) and the Mars Science Laboratory (MSL). Although the geologic context of the three landing sites are different, comparisons across the datasets can provide greater insight than using data from one mission alone. The Alpha Particle X-ray Spectrometer (APXS) is common to all three rovers (Spirit at Gusev crater, Opportunity at Meridiani Planum, and Curiosity at Gale crater) and provides a consistent basis for these comparisons. Soil and Dust: Fine grained basaltic soils and dust are remarkably uniform in chemical composition across multiple landing sites. These similarities in the concentrations of major, minor, and a few trace elements (Fig. 1) are indicative of planet-wide consistency in the composition of source materials for the soils. S and Cl vary by a factor of two in the soil and dust, but there is no clear association with any bulk cation (e.g., no correlation between S and total Ca, Mg, or Fe in soils). These volatile elements, however, are clearly associated with the nanophase-ferric iron component in the soil established by Mössbauer spectroscopy [1,2]. S and Cl likely originated as acidic species from volcanic out-gassing and subsequently coalesced on dust and sand grain surfaces, possibly with an affinity towards Fe3+ sites. Importantly, given the mobility of S and Cl in aqueous exposures, soil samples maintaining the typical molar S/Cl ratio of ~3.7:1 indicate minimal interactions with liquid water after the addition of S and Cl. In contrast to this well-established baseline, soil samples have been discovered at all three landing sites with atypical S/Cl ratios (e.g., subsurface soils), indicative of a more complex aqueous history.
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- 2019
12. Sulfur on Mars
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Gellert, R, Berger, J. A, Clark, B. C, O'Connell-Cooper, C. D, Ming, D. W, Mittlefehldt, D. W, Schroder, C, Thompson, L. M, VanBommel, S. J, and Yen, A. S
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Lunar And Planetary Science And Exploration - Abstract
The S contents of rocks and soils are indicative of various alteration processes on Mars, e.g.[1]. It has been quantified along traverses at 4 landing sites – Pathfinder, both MERs and MSL – by the APXS [2,3]. At the MSL and MER sites, sulfur abundances, correlations with likely bound cations and other elements, and complementary mineralogical and textural data have provided important insights into alteration processes and periods of more habitable environments in the distant past.
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- 2019
13. Untangling Source-To-Sink Geochemical Signals in a ~3.5 Ga Martian Lake: Sedimentology and Geochemistry of the Murray Formation
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Siebach, K. L, Fedo, C. M, Rampe, E. B, Grotzinger, J. P, Thompson, L. M, O’Connell-Cooper, C, Edgar, L. E, and Fraeman, A. A
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Space Sciences (General) - Abstract
Sedimentary rocks are historical archives of planetary surface processes; their grains, textures, and chemistry integrate the effects of source terrains, paleoclimatic conditions, weathering and transport processes, authigenic mineral precipitation, and diagenesis, which records groundwater chemistry through time. “Source to Sink” basin analysis seeks to constrain the influence of each of these different signals through sedimentary and geochemical analyses. Here, we use Mars Science Laboratory (MSL) Curiosity rover images and geochemical and mineralogical data from a traverse across a portion of the Murray formation—the lowermost unit exposed in the Gale crater central mound—to begin to constrain the aspects of the source to sink system that formed this Martian mudstone between 3.7 and 3.2 Ga.
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- 2019
14. Origin and Speciation of Sulfur Compounds in the Murray Formation, Gale Crater, Mars
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Yen, A. S, Gellert, R, Achilles, C. N, Berger, J. A, Blake, D. F, Clark, B. C, McAdam, C, Wing, D. M, Morris, R. V, Morrison, S. M, Rampe, E. B, Sutter, B, Thompson, L. M, VanBommel, S. J, and Vaniman, D. T
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Lunar And Planetary Science And Exploration - Abstract
The Mars Curiosity rover has traversed nearly 20 km and gained over 350 meters in elevation since landing in Gale crater in August 2012. Through 2250 sols of surface operations, Curiosity has spent approximately 60% of its time investigating the Murray formation, a unit of layered sediments. The occurrence of sulfur compounds in the Murray formation has been established by imaging of light-toned veins by MastCam and MAHLI, chemical compositions measured by the Alpha Particle X-ray Spectrometer (APXS) and ChemCam, crystalline phase identifications by the CheMin X-ray diffractometer, and evolved gas analyses from the Sample Analysis at Mars (SAM) instrument.
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- 2019
15. Compositional Characteristics and Trends Within the Vera Rubin Ridge, Gale Crater, Mars as Determined by APXS: Sedimentary, Diagenetic and Alteration History
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Thompson, L. M, Fraeman, A. A, Berger, J. A, Rampe, E. B, Boyd, N. I, Gellert, R, O'Connell-Cooper, C, Spray, J. G, VanBommel, S, Wilhelm, B, and Yen, A
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Lunar And Planetary Science And Exploration - Abstract
The Mars Science Laboratory (MSL) Curiosity rover has spent the last two years investigating a prominent resistant ridge, informally named the Vera Rubin Ridge (VRR), at the base of Mount Sharp (Aeolis Mons). The ridge has been a high priority science target for the MSL mission since landing in Gale crater more than 6 years ago because of the detection of a strong hematite spectral signature, and its distinct topography. Examining the chemistry of the ridge can aid in determining the relationship to other rocks analyzed during the rover traverse, specifically the Murray formation (fm) encountered below the ridge. We can also determine compositional trends with elevation and/or laterally within the ridge, and whether spectral properties observed on the ridge, both from orbit and in situ, correspond with changes in chemistry. The composition of the ridge, combined with mineralogy of drilled samples, can help to elucidate bigger picture questions regarding depositional environment, possible changing lake water chemistry and diagenetic/alteration history.
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- 2019
16. Constraining Alteration Processes Along the Siccar Point Group Unconformity, Gale Crater, Mars: Results From the Sample Analysis at Mars Instrument
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Sutter, B., primary, McAdam, A. C., additional, Wong, G. M., additional, Clark, J. V., additional, Archer, P. D., additional, Franz, H. B., additional, Gasda, P. J., additional, Ming, D. W., additional, Yen, A., additional, Lewis, J. M. T., additional, Schwenzer, S. P., additional, Turner, S. M. R., additional, Rampe, E. B., additional, Eigenbrode, J. L., additional, Stern, J. C., additional, Thompson, L. M., additional, Dehouck, E., additional, Bedford, C., additional, Banham, S., additional, Bryk, A. B., additional, O’Connell‐Cooper, C., additional, House, C. S., additional, Millan, M., additional, Freissinet, C., additional, Navarro‐Gonzalez, R., additional, Mahaffy, P. R., additional, and Malespin, C. A., additional
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- 2022
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17. Alteration at the Base of the Siccar Point Unconformity and Further Evidence for an Alkaline Provenance at Gale Crater: Exploration of the Mount Sharp Group, Greenheugh Pediment Cap Rock Contact With APXS
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Thompson, L. M., primary, Spray, J. G., additional, O’Connell‐Cooper, C., additional, Berger, J. A., additional, Yen, A., additional, Gellert, R., additional, Boyd, N., additional, McCraig, M. A., additional, and VanBommel, S. J., additional
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- 2022
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18. Manganese Mobility in Gale Crater, Mars: Leached Bedrock and Localized Enrichments
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Berger, J. A., primary, King, P. L., additional, Gellert, R., additional, Clark, B. C., additional, Flood, V. A., additional, McCraig, M. A., additional, Ming, D. W., additional, O’Connell‐Cooper, C. D., additional, Schmidt, M. E., additional, Thompson, L. M., additional, VanBommel, S. J. V., additional, Wilhelm, B., additional, and Yen, A. S., additional
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- 2022
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19. Curiosity's Investigation at Vera Rubin Ridge
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Fraeman, A. A, Edgar, L. A, Grotzinger, J. P, Vasavada, A. R, Johnson, J. R, Wellington, D. F, Fox, V. K, Sun, V. Z, Hardgrove, C. J, Horgan, B. N, House, C. H, Johnson, S. S, Stack Morgan, K. M, Rampe, E. B, Thompson, L. M, Wiens, R. C, and Williams, A. J
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Lunar And Planetary Science And Exploration - Abstract
The Curiosity rover is exploring Vera Rubin Ridge (VRR), a ~6.5 km long and ~200 m wide topographic feature trending northeast-southwest across Aeolis Mons (informally known as Mt. Sharp) (Fig 1). In orbital data, VRR is distinct from the underlying Murray formation due to its relative erosional resistance and greater exposure of bedrock. Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) orbital data show a hematite spectral signature over much of the ridge (Fig. 2). On the ground, Curiosity also observed hematite associated with the sedimentary rocks of the underlying Murray formation, although these detections are difficult to see with CRISM due to mixing with sand and dust.
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- 2018
20. Statistical Analysis of APXS‐Derived Chemistry of the Clay‐Bearing Glen Torridon Region and Mount Sharp Group, Gale Crater, Mars
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O’Connell‐Cooper, C. D., primary, Thompson, L. M., additional, Spray, J. G., additional, Berger, J. A., additional, Gellert, R., additional, McCraig, M., additional, VanBommel, S. J., additional, and Yen, A., additional
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- 2022
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21. Evolved Gas Analyses of Sedimentary Rocks and Eolian Sediment in Gale Crater, Mars: Results of the Curiosity Rover's Sample Analysis at Mars Instrument from Yellowknife Bay to the Namib Dune
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Sutter, B, McAdam, A. C, Mahaffy, P. R, Ming, D. W, Edgett, K. S, Rampe, E. B, Eigenbrode, J. L, Franz, H. B, Freissinet, C, Grotzinger, J. P, Steele, A, House, C. H, Archer, P. D, Malespin, C. A, Navarro-González, R, Stern, J. C, Bell, J. F, Calef, F. J, Gellert, R, Glavin, D. P, Thompson, L. M, and Yen, A. S
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Lunar And Planetary Science And Exploration - Abstract
The sample analysis at Mars instrument evolved gas analyzer (SAM-EGA) has detected evolved water, H2, SO2, H2S, NO, CO2, CO, O2, and HCl from two eolian sediments and nine sedimentary rocks from Gale Crater, Mars. These evolved gas detections indicate nitrates, organics, oxychlorine phase, and sulfates are widespread with phyllosilicates and carbonates occurring in select Gale Crater materials. Coevolved CO2 (160 +/- 248-2373 +/- 820 μgC(CO2)/g) and CO (11 +/- 3-320 +/- 130 μgC(CO)/g) suggest that organic C is present in Gale Crater materials. Five samples evolved CO2 at temperatures consistent with carbonate (0.32 +/- 0.05-0.70 +/- 0.1 wt % CO3). Evolved NO amounts to 0.002 +/- 0.007-0.06 +/- 0.03 wt % NO3. Evolution of O2 suggests that oxychlorine phases (chlorate/perchlorate) (0.05 +/- 0.025-1.05 +/- 0.44 wt % ClO4) are present, while SO2 evolution indicates the presence of crystalline and/or poorly crystalline Fe and Mg sulfate and possibly sulfide. Evolved H2O (0.9 +/- 0.3-2.5 +/- 1.6 wt % H2O) is consistent with the presence of adsorbed water, hydrated salts, interlayer/structural water from phyllosilicates, and possible inclusion water in mineral/amorphous phases. Evolved H2 and H2S suggest that reduced phases occur despite the presence of oxidized phases (nitrate, oxychlorine, sulfate, and carbonate). SAM results coupled with CheMin mineralogical and Alpha-Particle X-ray Spectrometer elemental analyses indicate that Gale Crater sedimentary rocks have experienced a complex authigenetic/diagenetic history involving fluids with varying pH, redox, and salt composition. The inferred geochemical conditions were favorable for microbial habitability and if life ever existed, there was likely sufficient organic C to support a small microbial population.
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- 2017
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22. Evolved Gas Analyses of the Murray Formation in Gale Crater, Mars: Results of the Curiosity Rover's Sample Analysis at Mars (SAM) Instrument
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Sutter, B, McAdam, A. C, Rampe, E. B, Thompson, L. M, Ming, D. W, Mahaffy, P. R, Navarro-Gonzalez, R, Stern, J. C, Eigenbrode, J. L, and Archer, P. D
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Lunar And Planetary Science And Exploration - Abstract
The Sample Analysis at Mars (SAM) instrument aboard the Mars Science Laboratory rover has analyzed 13 samples from Gale Crater. All SAM-evolved gas analyses have yielded a multitude of volatiles (e.g., H2O, SO2, H2S, CO2, CO, NO, O2, HCl) [1- 6]. The objectives of this work are to 1) Characterize recent evolved SO2, CO2, O2, and NO gas traces of the Murray formation mudstone, 2) Constrain sediment mineralogy/composition based on SAM evolved gas analysis (SAM-EGA), and 3) Discuss the implications of these results relative to understanding the geological history of Gale Crater.
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- 2017
23. Acidic Fluids Across Mars: Detections of Magnesium-Nickel Sulfates
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Yen, A. S, Ming, D. W, Gellert, R, Mittlefehldt, D. W, Rampe, E. B, Vaniman, D. T, Thompson, L. M, Morris, R. V, Clark, B. C, and VanBommel, S. J
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Lunar And Planetary Science And Exploration - Abstract
Calcium, magnesium and ferric iron sulfates have been detected by the instrument suites on the Mars rovers. A subset of the magnesium sulfates show clear associations with nickel. These associations indicate Ni(2+) co-precipitation with or substitution for Mg(2+) from sulfate-saturated solutions. Nickel is ex-tracted from primary rocks almost exclusively at pH values less than 6, constraining the formation of these Mg-Ni sulfates to mildly to strongly acidic conditions. There is clear evidence for aqueous alteration at the rim of Endeavour Crater (Meridiani Planum), in the Murray formation mudstone (Gale Crater), and near Home Plate (Gusev Crater). The discovery of Mg-Ni sulfates at these locations indicates a history of fluid-rock interactions at low pH.
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- 2017
24. Statistical analysis of APXS-derived chemistry of the clay-bearing Glen Torridon region and Mount Sharp group, Gale crater, Mars
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O'Connell-Cooper, C. D., primary, Thompson, L. M., additional, Spray, J. G., additional, Berger, J. A., additional, Gellert, R., additional, McCraig, M., additional, VanBommel, S. J., additional, and Yen, A., additional
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- 2022
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25. Elemental Gains/Losses Associated with Alteration Fractures in an Eolian Sandstone, Gale Crater, Mars
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Ming, D. W, Yen, A. S, Gellert, R, Sutter, B, Berger, J. A, Thompson, L. M, Schmidt, M. E, Morris, R. V, and Treiman, A. H
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Lunar And Planetary Science And Exploration - Abstract
The Mars Science Laboratory rover Curiosity has traversed up section through approximately 100 m of sedimentary rocks deposited in fluvial, deltaic, lacustrine, and eolian environments (Bradbury group and overlying Mount Sharp group). The Stimson formation unconformably overlies a lacustrine mudstone at the base of the Mount Sharp group and has been interpreted to be a cross-bedded sandstone of lithified eolian dunes. Unaltered Stimson sandstone has a basaltic composition similar to the average Mars crustal composition, but is more variable and ranges to lower K and higher Al. Fluids passing through alteration "halos" adjacent to fractures have altered the chemistry and mineralogy of the sandstone. Elemental mass gains and losses in the alteration halos were quantified using immobile element concentrations, i.e., Ti (taus). Alteration halos have elemental gains in Si, Ca, S, and P and large losses in Al, Fe, Mn, Mg, Na, K, Ni, and Zn. Mineralogy of the altered Stimson is dominated by Ca-sulfates, Si-rich X-ray amorphous materials along with plagioclase feldspar, magnetite, and pyroxenes. The igneous phases were less abundant in the altered sandstone with a lower pyroxene/plagioclase feldspar. Large elemental losses suggest acidic fluids initially removed these elements (Al mobile under acid conditions). Enrichments in Si, Ca, and S suggest secondary fluids (possibly alkaline) passed through these fractures leaving behind X-ray amorphous Si and Ca-sulfates. The mechanism for the large elemental gains in P is unclear. The geochemistry and mineralogy of the altered sandstone suggests a complicated diagenetic history with multiple episodes of aqueous alteration under a variety of environmental conditions (e.g., acidic, alkaline).
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- 2016
26. Cementation and Aqueous Alteration of a Sandstone Unit Under Acidic Conditions in Gale Crater, Mars
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Yen, A. S, Blake, D. F, Ming, D. W, Morris, R. V, Gellert, R, Clark, B, Vaniman, D. T, Chipera, S. J, Thompson, L. M, Bristow, T. F, Rampe, E. B, and Crisp, J. A
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Lunar And Planetary Science And Exploration - Abstract
The Curiosity rover landed on Mars in August 2012 to explore the sedimentary history and to assess the habitability of Gale Crater. After 1200 sols of surface operations and over 12 km of traverse distance, the mineralogy of 10 samples has been determined by the CheMin X-ray diffractometer (XRD) and the chemical composition of nearly 300 targets has been established by the Alpha Particle X-ray Spectrometer (APXS). Light-toned fracture zones containing elevated concentrations of silica have been studied by Curiosity's instruments to determine the nature of the fluids that resulted in the enrichment of SiO2. Multiple fluid exposures are evident, and the chemistry and mineralogy data indicate at least two aqueous episodes may have occurred under acidic conditions.
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- 2016
27. Huntingtonʼs disease cerebrospinal fluid seeds aggregation of mutant huntingtin
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Tan, Z, Dai, W, van Erp, T GM, Overman, J, Demuro, A, Digman, M A, Hatami, A, Albay, R, Sontag, E M, Potkin, K T, Ling, S, Macciardi, F, Bunney, W E, Long, J D, Paulsen, J S, Ringman, J M, Parker, I, Glabe, C, Thompson, L M, Chiu, W, and Potkin, S G
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- 2015
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28. Silica Retention and Enrichment in Open-System Chemical Weathering on Mars
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Yen, A. S, Ming, D. W, Gellert, R, Clark, B. C, Mittlefehldt, D. W, Morris, R. V, Thompson, L. M, and Berger, J
- Subjects
Chemistry And Materials (General) ,Lunar And Planetary Science And Exploration - Abstract
Chemical signatures of weathering are evident in the Alpha Particle X-ray Spectrometer (APXS) datasets from Gusev Crater, Meridiani Planum, and Gale Crater. Comparisons across the landing sites show consistent patterns indicating silica retention and/or enrichment in open-system aqueous alteration.
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- 2015
29. Germanium Enrichments in Sedimentary Rocks in Gale Crater, Mars: Constraining the Timing of Alteration and Character of the Protolith
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Berger, J. A, Schmidt, M. E, Gellert, R, Campbell, J. L, Boyd, N. I, Elliott, B. E, Fisk, M. R, King, P. L, Ming, D. W, Perrett, G. M, Thompson, L. M, VanBommel, S. J, and Yen, A
- Subjects
Geophysics - Abstract
Rocks enriched in Ge have been discovered in Gale Crater, Mars, by the Alpha-particle X-ray spectrometer (APXS) on the Mars Science Lab (MSL) rover, Curiosity. The Ge concentrations in Gale Crater (commonly >50 ppm) are remarkably high in comparison to Earth, where Ge ranges from 0.5-4.0 ppm in igneous rocks and 0.2-3.3 ppm in siliciclastic sediment. Primary meteoritic input is not likely the source of high Ge because Ge/Ni in chondrites (approx.0.003) and irons (<0.04) is lower than in Gale rocks (0.08-0.2). Earth studies show Ge is a useful geochemical tracer because it is coherent with Si during magmatic processes and Ge/Si varies less than 20% in basalts. Ge and Si fractionate during soil/regolith weathering, with Ge preferentially sequestered in clays. Ge is also concentrated in Cu- and Zn-rich hydrothermal sulfide deposits and Fe- and Mnrich oxide deposits. Other fluid-mobile elements (K, Zn, Cl, Br, S) are also enriched at Gale and further constrain aqueous alteration processes. Here, we interpret the sediment alteration history and present a possible model for Ge enrichments at Gale involving fluid alteration of the protolith.
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- 2015
30. Statistical Analysis of APXS‐Derived Chemistry of the Clay‐Bearing Glen Torridon Region and Mount Sharp Group, Gale Crater, Mars.
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O'Connell‐Cooper, C. D., Thompson, L. M., Spray, J. G., Berger, J. A., Gellert, R., McCraig, M., VanBommel, S. J., and Yen, A.
- Subjects
GALE Crater (Mars) ,FACIES ,ALPHA rays ,MARS (Planet) ,X-ray spectrometers ,TRACE elements ,LUNAR craters ,PHOSPHORUS in water - Abstract
The Glen Torridon stratigraphic sequence marks the transition from the low energy lacustrine‐dominated Murray formation (Mf) (Jura member: Jm) to the more diverse Carolyn Shoemaker formation (CSf) (Knockfarril Hill member: Knockfarril Hill; Glasgow member: Glasgow). This transition defines a change in depositional setting. Alpha Particle X‐ray Spectrometer (APXS) results and statistical analysis reveal that the bulk primary geochemistry of Mf targets are broadly in family with CSf targets, but with subtle compositional and diagenetic trends with increasing elevation. APXS results reveal significant compositional differences between Jura_GT and the stratigraphically equivalent Jura on Vera Rubin ridge (Jura_VRR). The data define two geochemical facies (high‐K or high‐Mg), with a strong bimodal grain distribution in Jura_GT and Knockfarril Hill. The contact between Knockfarril Hill and Glasgow is marked by abrupt sedimentological changes but a similar composition for both. Away from the contact, the Knockfarril Hill and Glasgow plot discretely, suggesting a zone of common alteration at the transition and/or a gradual transition in provenance with increasing elevation in the Glasgow member. APXS results point to a complex history of diagenesis within Glen Torridon, with increasing diagenesis close to the Basal Siccar Point unconformity on the Greenheugh pediment, and with proximity to the beginning of the clay sulfate transition. Elemental mobility is evident in localized enrichments or depletions in Ca, S, Mn, P, Zn, Ni. The highly altered Hutton interval, in contact with the unconformity on Tower butte, is also identified on Western Butte, indicating that the "interval" was once laterally extensive. Plain Language Summary: The Mars Science Laboratory Curiosity rover has traversed the Glen Torridon locale in Gale crater, Mars. The rover has provided evidence in the rocks of a change from a lake setting to a river setting, with increasing elevation through the rock record. Geochemical results from the Alpha Particle X‐ray Spectrometer (APXS) confirm a slow change in composition over time as the sediments that formed the rock were laid down. Fluids percolated through the sediments, altering the composition, with localized enrichments of calcium, sulfur, manganese, phosphorus, sodium, zinc, nickel, which are now present as veins, and small (typically <0.3 cm; more rarely, 0.5–2 cm) rectangular nodules and concentrations. Key Points: Alpha Particle X‐ray Spectrometer data for Glen Torridon, Gale crater documents subtle compositional changesMultiple episodes of alteration and diagenesis identifiedCompositional similarities between Glen Torridon members confirms the highly localized nature of the Vera Rubin ridge alteration [ABSTRACT FROM AUTHOR]
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- 2022
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31. Evidence for a Diagenetic Origin of Vera Rubin Ridge, Gale Crater, Mars:Summary and Synthesis of Curiosity's Exploration Campaign
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Fraeman, A. A., Edgar, L. A., Rampe, E. B., Thompson, L. M., Frydenvang, J., Fedo, C. M., Catalano, J. G., Dietrich, W. E., Gabriel, T. S.J., Vasavada, A. R., Grotzinger, J. P., L'Haridon, J., Mangold, N., Sun, V. Z., House, C. H., Bryk, A. B., Hardgrove, C., Czarnecki, S., Stack, K. M., Morris, R. V., Arvidson, R. E., Banham, S. G., Bennett, K. A., Bridges, J. C., Edwards, C. S., Fischer, W. W., Fox, V. K., Gupta, S., Horgan, B. H.N., Jacob, S. R., Johnson, J. R., Johnson, S. S., Rubin, D. M., Salvatore, M. R., Schwenzer, S. P., Siebach, K. L., Stein, N. T., Turner, S. M.R., Wellington, D. F., Wiens, R. C., Williams, A. J., David, G., Wong, G. M., Fraeman, A. A., Edgar, L. A., Rampe, E. B., Thompson, L. M., Frydenvang, J., Fedo, C. M., Catalano, J. G., Dietrich, W. E., Gabriel, T. S.J., Vasavada, A. R., Grotzinger, J. P., L'Haridon, J., Mangold, N., Sun, V. Z., House, C. H., Bryk, A. B., Hardgrove, C., Czarnecki, S., Stack, K. M., Morris, R. V., Arvidson, R. E., Banham, S. G., Bennett, K. A., Bridges, J. C., Edwards, C. S., Fischer, W. W., Fox, V. K., Gupta, S., Horgan, B. H.N., Jacob, S. R., Johnson, J. R., Johnson, S. S., Rubin, D. M., Salvatore, M. R., Schwenzer, S. P., Siebach, K. L., Stein, N. T., Turner, S. M.R., Wellington, D. F., Wiens, R. C., Williams, A. J., David, G., and Wong, G. M.
- Abstract
This paper provides an overview of the Curiosity rover's exploration at Vera Rubin ridge (VRR) and summarizes the science results. VRR is a distinct geomorphic feature on lower Aeolis Mons (informally known as Mount Sharp) that was identified in orbital data based on its distinct texture, topographic expression, and association with a hematite spectral signature. Curiosity conducted extensive remote sensing observations, acquired data on dozens of contact science targets, and drilled three outcrop samples from the ridge, as well as one outcrop sample immediately below the ridge. Our observations indicate that strata composing VRR were deposited in a predominantly lacustrine setting and are part of the Murray formation. The rocks within the ridge are chemically in family with underlying Murray formation strata. Red hematite is dispersed throughout much of the VRR bedrock, and this is the source of the orbital spectral detection. Gray hematite is also present in isolated, gray-colored patches concentrated toward the upper elevations of VRR, and these gray patches also contain small, dark Fe-rich nodules. We propose that VRR formed when diagenetic event(s) preferentially hardened rocks, which were subsequently eroded into a ridge by wind. Diagenesis also led to enhanced crystallization and/or cementation that deepened the ferric-related spectral absorptions on the ridge, which helped make them readily distinguishable from orbit. Results add to existing evidence of protracted aqueous environments at Gale crater and give new insight into how diagenesis shaped Mars' rock record.
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- 2020
32. Formation of Tridymite and Evidence for a Hydrothermal History at Gale Crater, Mars
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Yen, A. S., primary, Morris, R. V., additional, Ming, D. W., additional, Schwenzer, S. P., additional, Sutter, B., additional, Vaniman, D. T., additional, Treiman, A. H., additional, Gellert, R., additional, Achilles, C. N., additional, Berger, J. A., additional, Blake, D. F., additional, Boyd, N. I., additional, Bristow, T. F., additional, Chipera, S., additional, Clark, B. C., additional, Craig, P. I., additional, Downs, R. T., additional, Franz, H. B., additional, Gabriel, T., additional, McAdam, A. C., additional, Morrison, S. M., additional, O’Connell‐Cooper, C. D., additional, Rampe, E. B., additional, Schmidt, M. E., additional, Thompson, L. M., additional, and VanBommel, S. J., additional
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- 2021
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33. Study of Electrolyte and Electrode Composition Changes vs Time in Aged Li-Ion Cells
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Thompson, L. M., primary, Harlow, J. E., additional, Eldesoky, A., additional, Bauer, M. K. G., additional, Cheng, J. H., additional, Stone, W. S., additional, Taskovic, T., additional, McFarlane, C. R. M., additional, and Dahn, J. R., additional
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- 2021
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34. Optimizing Electrolyte Additive Loadings in NMC532/Graphite Cells: Vinylene Carbonate and Ethylene Sulfate
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Taskovic, T., primary, Thompson, L. M., additional, Eldesoky, A., additional, Lumsden, M. D., additional, and Dahn, J. R., additional
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- 2021
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35. FROM BASIC MECHANISMS TO THERAPEUTIC TARGETS IN HUNTINGTONʼS DISEASE: S05-04
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Thompson, L. M.
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- 2011
36. Evidence for a Diagenetic Origin of Vera Rubin Ridge, Gale Crater, Mars: Summary and Synthesis of Curiosity's Exploration Campaign
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Fraeman, A. A., primary, Edgar, L. A., additional, Rampe, E. B., additional, Thompson, L. M., additional, Frydenvang, J., additional, Fedo, C. M., additional, Catalano, J. G., additional, Dietrich, W. E., additional, Gabriel, T. S. J., additional, Vasavada, A. R., additional, Grotzinger, J. P., additional, L'Haridon, J., additional, Mangold, N., additional, Sun, V. Z., additional, House, C. H., additional, Bryk, A. B., additional, Hardgrove, C., additional, Czarnecki, S., additional, Stack, K. M., additional, Morris, R. V., additional, Arvidson, R. E., additional, Banham, S. G., additional, Bennett, K. A., additional, Bridges, J. C., additional, Edwards, C. S., additional, Fischer, W. W., additional, Fox, V. K., additional, Gupta, S., additional, Horgan, B. H. N., additional, Jacob, S. R., additional, Johnson, J. R., additional, Johnson, S. S., additional, Rubin, D. M., additional, Salvatore, M. R., additional, Schwenzer, S. P., additional, Siebach, K. L., additional, Stein, N. T., additional, Turner, S. M. R., additional, Wellington, D. F., additional, Wiens, R. C., additional, Williams, A. J., additional, David, G., additional, and Wong, G. M., additional
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- 2020
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37. Spectral, Compositional, and Physical Properties of the Upper Murray Formation and Vera Rubin Ridge, Gale Crater, Mars
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Jacob, S. R., primary, Wellington, D. F., additional, Bell, J. F., additional, Achilles, C., additional, Fraeman, A. A., additional, Horgan, B., additional, Johnson, J. R., additional, Maurice, S., additional, Peters, G. H., additional, Rampe, E. B., additional, Thompson, L. M., additional, and Wiens, R. C., additional
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- 2020
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38. APXS‐Derived Compositional Characteristics of Vera Rubin Ridge and Murray Formation, Gale Crater, Mars: Geochemical Implications for the Origin of the Ridge
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Thompson, L. M., primary, Berger, J. A., additional, Spray, J. G., additional, Fraeman, A. A., additional, McCraig, M. A., additional, O'Connell‐Cooper, C. D., additional, Schmidt, M. E., additional, VanBommel, S., additional, Gellert, R., additional, Yen, A., additional, and Boyd, N. I., additional
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- 2020
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39. Evidence for Multiple Diagenetic Episodes in Ancient Fluvial‐Lacustrine Sedimentary Rocks in Gale Crater, Mars
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Achilles, C. N., primary, Rampe, E. B., additional, Downs, R. T., additional, Bristow, T. F., additional, Ming, D. W., additional, Morris, R. V., additional, Vaniman, D. T., additional, Blake, D. F., additional, Yen, A. S., additional, McAdam, A. C., additional, Sutter, B., additional, Fedo, C. M., additional, Gwizd, S., additional, Thompson, L. M., additional, Gellert, R., additional, Morrison, S. M., additional, Treiman, A. H., additional, Crisp, J. A., additional, Gabriel, T. S. J., additional, Chipera, S. J., additional, Hazen, R. M., additional, Craig, P. I., additional, Thorpe, M. T., additional, Des Marais, D. J., additional, Grotzinger, J. P., additional, Tu, V. M., additional, Castle, N., additional, Downs, G. W., additional, Peretyazhko, T. S., additional, Walroth, R. C., additional, Sarrazin, P., additional, and Morookian, J. M., additional
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- 2020
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40. MODULATION OF HTT AGGREGATION INTERMEDIATES BY SMALL MOLECULES: D04
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Mitchell, E J, Lotz, G P, Weiss, A, Necula, M, Apostol, B, Finkbeiner, S, Paganetti, P, Marsh, J L, Muchowski, P J, Glabe, C, and Thompson, L M
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- 2009
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41. POST-TRANSLATIONAL MODIFICATION OF HTT WITHIN ITS FIRST 17 AMINO ACIDS REGULATES ITS STABILITY, AGGREGATION, CELLULAR LOCALIZATION AND TOXICITY
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Steffan, J S, OʼRourke, J G, Aiken, C T, Kaltenbach, L S, Agrawal, N, Illes, K, Pallos, J, Khoshnan, A, Martinez-Vincente, M, Arrasate, M, Lukacsovich, T, Dasso, M, Hayden, M R, Zeitlin, S O, Wanker, E E, Lima, C D, Finkbeiner, S, Huang, L, Lo, D C, Patterson, P H, Cuervo, A M, Marsh, J L, and Thompson, L M
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- 2009
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42. DEVELOPMENT SMALL MOLECULE INHIBITORS OF DEACETYLASEE SIRTUIN 2 FOR TREATMENT AGGREGATE-ASSOCIATED NEURODEGENERATIVE DISEASES: C14–01
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Kazantsev, A. G, Outeiro, T. F, Amore, A. M, Pallos, J., Kontopoulos, E., Atmann, S., Kufareva, I., Strathearn, K. E, Lambert, E., Volk, C. B, Parker, A., Maxwell, M. M, Young, A. B, Rochet, J. C, Lowden, P., McLean, P. J, Abagyan, R., Thompson, L. M, Feany, M. B, Neri, C., Bates, G. P, Hyman, B. T, and Marsh, J. L
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- 2008
43. NF-κB2 signalling in enteroids modulates enterocyte responses to secreted factors from bone marrow-derived dendritic cells
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Jones, L G, Vaisa, A, Thompson, L M, Ikuomola, F I, Caamaño, J H, Burkitt, M D, Miyajima, F, Williams, J M, Campbell, B J, Pritchard, D M, and Duckworth, C A
- Abstract
Alternative pathway NF-κB signalling regulates susceptibility towards developing inflammatory bowel disease (IBD), colitis-associated cancer and sepsis-associated intestinal epithelial cell apoptosis and shedding. However, the cell populations responsible for the perturbed alternative pathway NF-κB signalling in intestinal mucosal pathology remain unclear. In order to investigate the contribution of the epithelial compartment, we have tested whether NF-κB2 regulated transcription in intestinal epithelial cells controls the intestinal epithelial response to cytokines that are known to disrupt intestinal barrier permeability. Enteroids were generated from the proximal, middle and distal regions of small intestine (SI) from C57BL/6J wild-type mice and displayed region-specific morphology that was maintained during sub-culture. Enteroids treated with 100 ng/mL TNF were compared with corresponding regions of SI from C57BL/6J mice treated systemically with 0.33 mg/kg TNF for 1.5 h. TNF-induced apoptosis in all regions of the intestine in vitro and in vivo but resulted in Paneth cell degranulation only in proximal tissue-derived SI and enteroids. TNF also resulted in increased enteroid sphericity (quantified as circularity from two-dimensional bright field images). This response was dose and time-dependent and correlated with active caspase-3 immunopositivity. Proximal tissue-derived enteroids generated from Nfκb2−/− mice showed a significantly blunted circularity response following the addition of TNF, IFNγ, lipopolysaccharide (LPS) activated C57BL/6J-derived bone marrow-derived dendritic cells (BMDC) and secreted factors from LPS-activated BMDCs. However, Nfκb1−/− mouse-derived enteroids showed no significant changes in response to these stimuli. In conclusion, the selection of SI region is important when designing enteroid studies as region-specific identity and response to stimuli such as TNF are maintained in culture. Intestinal epithelial cells are at least partially responsible for regulating their own fate by modulating NF-κB2 signalling in response to stimuli known to be involved in multiple intestinal and systemic diseases. Future studies are warranted to investigate the therapeutic potential of intestinal epithelial NF-κB2 inhibition.
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- 2019
44. Mineral‐Filled Fractures as Indicators of Multigenerational Fluid Flow in the Pahrump Hills Member of the Murray Formation, Gale Crater, Mars
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Kronyak, R. E., primary, Kah, L. C., additional, Edgett, K. S., additional, VanBommel, S. J., additional, Thompson, L. M., additional, Wiens, R. C., additional, Sun, V. Z., additional, and Nachon, M., additional
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- 2019
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45. Genome-wide Analyses Identify KIF5A as a Novel ALS Gene
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Nicolas, A., Kenna, K. P., Renton, A. E., Ticozzi, N., Faghri, F., Chia, R., Dominov, J. A., Kenna, B. J., Nalls, M. A., Keagle, P., Rivera, A. M., van Rheenen, W., Murphy, N. A., van Vugt, J. J. F. A., Geiger, J. T., Van der Spek, R. A., Pliner, H. A., Shankaracharya, Smith, B. N., Marangi, Giuseppe, Topp, S. D., Abramzon, Y., Gkazi, A. S., Eicher, J. D., Kenna, A., Logullo, F. O., Simone, I. L., Logroscino, Giandomenico, Salvi, F., Bartolomei, I., Borghero, G., Murru, M. R., Costantino, E., Pani, C., Puddu, R., Caredda, C., Piras, V., Tranquilli, S., Cuccu, S., Corongiu, D., Melis, M., Milia, A., Marrosu, F., Marrosu, M. G., Floris, G., Cannas, A., Capasso, Monica, Caponnetto, C., Mancardi, G., Origone, P., Mandich, P., Conforti, F. L., Cavallaro, S., Mora, G., Marinou, K., Sideri, R., Penco, S., Mosca, Luigi, Lunetta, C., Pinter, G. L., Corbo, M., Riva, N., Carrera, P., Volanti, P., Mandrioli, J., Fini, N., Fasano, Alfonso, Tremolizzo, L., Arosio, A., Ferrarese, C., Trojsi, F., Tedeschi, G., Monsurro, M. R., Piccirillo, G., Femiano, C., Ticca, A., Ortu, E., La Bella, V., Spataro, R., Colletti, T., Sabatelli, Mario, Zollino, Marcella, Conte, Amelia, Luigetti, Marco, Lattante, Serena, Santarelli, M., Petrucci, A., Pugliatti, M., Pirisi, A., Parish, L. D., Occhineri, P., Giannini, F., Battistini, S., Ricci, C., Benigni, M., Cau, T. B., Loi, D., Calvo, A., Moglia, C., Brunetti, M., Barberis, M., Restagno, G., Casale, F., Marrali, G., Fuda, G., Ossola, I., Cammarosano, S., Canosa, A., Ilardi, A., Manera, U., Grassano, M., Tanel, R., Pisano, F., Mazzini, L., Messina, S., D'Alfonso, Sandra, Corrado, L., Ferrucci, L., Harms, M. B., Goldstein, D. B., Shneider, N. A., Goutman, S. A., Simmons, Z., Miller, T. M., Chandran, S., Pal, S., Manousakis, G., Appel, S. H., Simpson, E., Wang, L., Baloh, R. H., Gibson, S. B., Bedlack, R., Lacomis, D., Sareen, D., Sherman, A., Bruijn, L., Penny, M., Moreno, C. D. A. M., Kamalakaran, S., Allen, A. S., Boone, B. E., Brown, R. H., Carulli, J. P., Chesi, A., Chung, W. K., Cirulli, E. T., Cooper, G. M., Couthouis, J., Day-Williams, A. G., Dion, P. A., Gitler, A. D., Glass, J. D., Han, Y., Harris, T., Hayes, S. D., Jones, A. L., Keebler, J., Krueger, B. J., Lasseigne, B. N., Levy, S. E., Lu, Y. -F., Maniatis, T., McKenna-Yasek, D., Myers, R. M., Petrovski, S., Pulst, S. M., Raphael, A. R., Ravits, J. M., Ren, Z., Rouleau, G. A., Sapp, P. C., Sims, K. B., Staropoli, J. F., Waite, L. L., Wang, Quanquan, Wimbish, J. R., Xin, W. W., Phatnani, H., Kwan, J., Broach, J., Arcila-Londono, X., Lee, E. B., Van Deerlin, V. M., Fraenkel, E., Ostrow, L. W., Baas, F., Zaitlen, N., Berry, J. D., Malaspina, A., Fratta, P., Cox, G. A., Thompson, L. M., Finkbeiner, S., Dardiotis, E., Hornstein, E., Macgowan, D. J. L., Heiman-Patterson, T., Hammell, M. G., Patsopoulos, N. A., Dubnau, J., Nath, A., Musunuri, R. L., Evani, U. S., Abhyankar, A., Zody, M. C., Kaye, J., Wyman, S. K., Lenail, A., Lima, L., Rothstein, J. D., Svendsen, C. N., Van Eyk, J. E., Maragakis, N. J., Kolb, S. J., Cudkowicz, M., Baxi, E., Benatar, M., Taylor, J. P., Wu, G., Rampersaud, E., Wuu, J., Rademakers, R., Zuchner, S., Schule, R., Mccauley, J., Hussain, S., Cooley, A., Wallace, M., Clayman, C., Barohn, R., Statland, J., Swenson, A., Jackson, C., Trivedi, J., Khan, S., Katz, J., Jenkins, L., Burns, T., Gwathmey, K., Caress, J., Mcmillan, C., Elman, L., Pioro, E. P., Heckmann, J., So, Y., Walk, D., Maiser, S., Zhang, J., Silani, V., Gellera, C., Ratti, A., Taroni, F., Lauria, G., Verde, F., Fogh, I., Tiloca, C., Comi, G. P., Soraru, G., Cereda, C., De Marchi, F., Corti, S., Ceroni, M., Siciliano, Giovanni, Filosto, M., Inghilleri, M., Peverelli, S., Colombrita, C., Poletti, B., Maderna, L., Del Bo, R., Gagliardi, S., Querin, G., Bertolin, C., Pensato, V., Castellotti, B., Camu, W., Mouzat, K., Lumbroso, S., Corcia, P., Meininger, V., Besson, G., Lagrange, E., Clavelou, P., Guy, N., Couratier, P., Vourch, P., Danel, V., Bernard, E., Lemasson, G., Laaksovirta, H., Myllykangas, L., Jansson, L., Valori, Vanna Maria, Ealing, J., Hamdalla, H., Rollinson, S., Pickering-Brown, S., Orrell, R. W., Sidle, K. C., Hardy, J., Singleton, A. B., Johnson, J. O., Arepalli, S., Polak, M., Asress, S., Al-Sarraj, S., King, A., Troakes, C., Vance, C., de Belleroche, J., ten Asbroek, A. L. M. A., Munoz-Blanco, J. L., Hernandez, D. G., Ding, J., Gibbs, J. R., Scholz, S. W., Floeter, M. K., Campbell, R. H., Landi, Francesco, Bowser, R., Kirby, J., Pamphlett, R., Gerhard, G., Dunckley, T. L., Brady, C. B., Kowall, N. W., Troncoso, J. C., Le Ber, I., Heiman-Patterson, T. D., Kamel, F., Van Den Bosch, L., Strom, T. M., Meitinger, T., Shatunov, A., Van Eijk, K. R., de Carvalho, M., Kooyman, M., Middelkoop, B., Moisse, M., Mclaughlin, R. L., Van Es, M. A., Weber, M., Boylan, K. B., Van Blitterswijk, M., Morrison, K. E., Basak, A. N., Mora, J. S., Drory, V. E., Shaw, P. J., Turner, M. R., Talbot, K., Hardiman, O., Williams, K. L., Fifita, J. A., Nicholson, G. A., Blair, I. P., Esteban-Perez, J., Garcia-Redondo, A., Al-Chalabi, A., Al Kheifat, A., Andersen, P. M., Chio, A., Cooper-Knock, J., Dekker, A., Redondo, A. G., Gotkine, M., Hide, W., Iacoangeli, A., Kiernan, M., Landers, J. E., Mill, J., Neto, M. M., Pardina, J. M., Newhouse, S., Pinto, S., Pulit, S., Robberecht, W., Shaw, C., Sproviero, W., Tazelaar, G., Van Damme, P., van den Berg, L. H., van Vugt, J., Veldink, J. H., Zatz, M., Bauer, D. C., Twine, N. A., Rogaeva, E., Zinman, L., Brice, A., Feldman, E. L., Ludolph, A. C., Weishaupt, J. H., Trojanowski, J. Q., Stone, D. J., Tienari, P., Shaw, C. E., Traynor, B. J., Marangi G. (ORCID:0000-0002-6898-8882), Logroscino G. (ORCID:0000-0003-1301-5343), Capasso M., Mosca L. (ORCID:0000-0003-4641-0841), Fasano A., Sabatelli M. (ORCID:0000-0001-6635-4985), Zollino M. (ORCID:0000-0003-4871-9519), Conte A., Luigetti M. (ORCID:0000-0001-7539-505X), Lattante S. (ORCID:0000-0003-2891-0340), D'Alfonso S., Siciliano G., Valori M., Landi F. (ORCID:0000-0002-3472-1389), Nicolas, A., Kenna, K. P., Renton, A. E., Ticozzi, N., Faghri, F., Chia, R., Dominov, J. A., Kenna, B. J., Nalls, M. A., Keagle, P., Rivera, A. M., van Rheenen, W., Murphy, N. A., van Vugt, J. J. F. A., Geiger, J. T., Van der Spek, R. A., Pliner, H. A., Shankaracharya, Smith, B. N., Marangi, Giuseppe, Topp, S. D., Abramzon, Y., Gkazi, A. S., Eicher, J. D., Kenna, A., Logullo, F. O., Simone, I. L., Logroscino, Giandomenico, Salvi, F., Bartolomei, I., Borghero, G., Murru, M. R., Costantino, E., Pani, C., Puddu, R., Caredda, C., Piras, V., Tranquilli, S., Cuccu, S., Corongiu, D., Melis, M., Milia, A., Marrosu, F., Marrosu, M. G., Floris, G., Cannas, A., Capasso, Monica, Caponnetto, C., Mancardi, G., Origone, P., Mandich, P., Conforti, F. L., Cavallaro, S., Mora, G., Marinou, K., Sideri, R., Penco, S., Mosca, Luigi, Lunetta, C., Pinter, G. L., Corbo, M., Riva, N., Carrera, P., Volanti, P., Mandrioli, J., Fini, N., Fasano, Alfonso, Tremolizzo, L., Arosio, A., Ferrarese, C., Trojsi, F., Tedeschi, G., Monsurro, M. R., Piccirillo, G., Femiano, C., Ticca, A., Ortu, E., La Bella, V., Spataro, R., Colletti, T., Sabatelli, Mario, Zollino, Marcella, Conte, Amelia, Luigetti, Marco, Lattante, Serena, Santarelli, M., Petrucci, A., Pugliatti, M., Pirisi, A., Parish, L. D., Occhineri, P., Giannini, F., Battistini, S., Ricci, C., Benigni, M., Cau, T. B., Loi, D., Calvo, A., Moglia, C., Brunetti, M., Barberis, M., Restagno, G., Casale, F., Marrali, G., Fuda, G., Ossola, I., Cammarosano, S., Canosa, A., Ilardi, A., Manera, U., Grassano, M., Tanel, R., Pisano, F., Mazzini, L., Messina, S., D'Alfonso, Sandra, Corrado, L., Ferrucci, L., Harms, M. B., Goldstein, D. B., Shneider, N. A., Goutman, S. A., Simmons, Z., Miller, T. M., Chandran, S., Pal, S., Manousakis, G., Appel, S. H., Simpson, E., Wang, L., Baloh, R. H., Gibson, S. B., Bedlack, R., Lacomis, D., Sareen, D., Sherman, A., Bruijn, L., Penny, M., Moreno, C. D. A. M., Kamalakaran, S., Allen, A. S., Boone, B. E., Brown, R. H., Carulli, J. P., Chesi, A., Chung, W. K., Cirulli, E. T., Cooper, G. M., Couthouis, J., Day-Williams, A. G., Dion, P. A., Gitler, A. D., Glass, J. D., Han, Y., Harris, T., Hayes, S. D., Jones, A. L., Keebler, J., Krueger, B. J., Lasseigne, B. N., Levy, S. E., Lu, Y. -F., Maniatis, T., McKenna-Yasek, D., Myers, R. M., Petrovski, S., Pulst, S. M., Raphael, A. R., Ravits, J. M., Ren, Z., Rouleau, G. A., Sapp, P. C., Sims, K. B., Staropoli, J. F., Waite, L. L., Wang, Quanquan, Wimbish, J. R., Xin, W. W., Phatnani, H., Kwan, J., Broach, J., Arcila-Londono, X., Lee, E. B., Van Deerlin, V. M., Fraenkel, E., Ostrow, L. W., Baas, F., Zaitlen, N., Berry, J. D., Malaspina, A., Fratta, P., Cox, G. A., Thompson, L. M., Finkbeiner, S., Dardiotis, E., Hornstein, E., Macgowan, D. J. L., Heiman-Patterson, T., Hammell, M. G., Patsopoulos, N. A., Dubnau, J., Nath, A., Musunuri, R. L., Evani, U. S., Abhyankar, A., Zody, M. C., Kaye, J., Wyman, S. K., Lenail, A., Lima, L., Rothstein, J. D., Svendsen, C. N., Van Eyk, J. E., Maragakis, N. J., Kolb, S. J., Cudkowicz, M., Baxi, E., Benatar, M., Taylor, J. P., Wu, G., Rampersaud, E., Wuu, J., Rademakers, R., Zuchner, S., Schule, R., Mccauley, J., Hussain, S., Cooley, A., Wallace, M., Clayman, C., Barohn, R., Statland, J., Swenson, A., Jackson, C., Trivedi, J., Khan, S., Katz, J., Jenkins, L., Burns, T., Gwathmey, K., Caress, J., Mcmillan, C., Elman, L., Pioro, E. P., Heckmann, J., So, Y., Walk, D., Maiser, S., Zhang, J., Silani, V., Gellera, C., Ratti, A., Taroni, F., Lauria, G., Verde, F., Fogh, I., Tiloca, C., Comi, G. P., Soraru, G., Cereda, C., De Marchi, F., Corti, S., Ceroni, M., Siciliano, Giovanni, Filosto, M., Inghilleri, M., Peverelli, S., Colombrita, C., Poletti, B., Maderna, L., Del Bo, R., Gagliardi, S., Querin, G., Bertolin, C., Pensato, V., Castellotti, B., Camu, W., Mouzat, K., Lumbroso, S., Corcia, P., Meininger, V., Besson, G., Lagrange, E., Clavelou, P., Guy, N., Couratier, P., Vourch, P., Danel, V., Bernard, E., Lemasson, G., Laaksovirta, H., Myllykangas, L., Jansson, L., Valori, Vanna Maria, Ealing, J., Hamdalla, H., Rollinson, S., Pickering-Brown, S., Orrell, R. W., Sidle, K. C., Hardy, J., Singleton, A. B., Johnson, J. O., Arepalli, S., Polak, M., Asress, S., Al-Sarraj, S., King, A., Troakes, C., Vance, C., de Belleroche, J., ten Asbroek, A. L. M. A., Munoz-Blanco, J. L., Hernandez, D. G., Ding, J., Gibbs, J. R., Scholz, S. W., Floeter, M. K., Campbell, R. H., Landi, Francesco, Bowser, R., Kirby, J., Pamphlett, R., Gerhard, G., Dunckley, T. L., Brady, C. B., Kowall, N. W., Troncoso, J. C., Le Ber, I., Heiman-Patterson, T. D., Kamel, F., Van Den Bosch, L., Strom, T. M., Meitinger, T., Shatunov, A., Van Eijk, K. R., de Carvalho, M., Kooyman, M., Middelkoop, B., Moisse, M., Mclaughlin, R. L., Van Es, M. A., Weber, M., Boylan, K. B., Van Blitterswijk, M., Morrison, K. E., Basak, A. N., Mora, J. S., Drory, V. E., Shaw, P. J., Turner, M. R., Talbot, K., Hardiman, O., Williams, K. L., Fifita, J. A., Nicholson, G. A., Blair, I. P., Esteban-Perez, J., Garcia-Redondo, A., Al-Chalabi, A., Al Kheifat, A., Andersen, P. M., Chio, A., Cooper-Knock, J., Dekker, A., Redondo, A. G., Gotkine, M., Hide, W., Iacoangeli, A., Kiernan, M., Landers, J. E., Mill, J., Neto, M. M., Pardina, J. M., Newhouse, S., Pinto, S., Pulit, S., Robberecht, W., Shaw, C., Sproviero, W., Tazelaar, G., Van Damme, P., van den Berg, L. H., van Vugt, J., Veldink, J. H., Zatz, M., Bauer, D. C., Twine, N. A., Rogaeva, E., Zinman, L., Brice, A., Feldman, E. L., Ludolph, A. C., Weishaupt, J. H., Trojanowski, J. Q., Stone, D. J., Tienari, P., Shaw, C. E., Traynor, B. J., Marangi G. (ORCID:0000-0002-6898-8882), Logroscino G. (ORCID:0000-0003-1301-5343), Capasso M., Mosca L. (ORCID:0000-0003-4641-0841), Fasano A., Sabatelli M. (ORCID:0000-0001-6635-4985), Zollino M. (ORCID:0000-0003-4871-9519), Conte A., Luigetti M. (ORCID:0000-0001-7539-505X), Lattante S. (ORCID:0000-0003-2891-0340), D'Alfonso S., Siciliano G., Valori M., and Landi F. (ORCID:0000-0002-3472-1389)
- Abstract
To identify novel genes associated with ALS, we undertook two lines of investigation. We carried out a genome-wide association study comparing 20,806 ALS cases and 59,804 controls. Independently, we performed a rare variant burden analysis comparing 1,138 index familial ALS cases and 19,494 controls. Through both approaches, we identified kinesin family member 5A (KIF5A) as a novel gene associated with ALS. Interestingly, mutations predominantly in the N-terminal motor domain of KIF5A are causative for two neurodegenerative diseases: hereditary spastic paraplegia (SPG10) and Charcot-Marie-Tooth type 2 (CMT2). In contrast, ALS-associated mutations are primarily located at the C-terminal cargo-binding tail domain and patients harboring loss-of-function mutations displayed an extended survival relative to typical ALS cases. Taken together, these results broaden the phenotype spectrum resulting from mutations in KIF5A and strengthen the role of cytoskeletal defects in the pathogenesis of ALS. Using a large-scale genome-wide association study and exome sequencing, we identified KIF5A as a novel gene associated with ALS. Our data broaden the phenotype resulting from mutations in KIF5A and highlight the importance of cytoskeletal defects in the pathogenesis of ALS.
- Published
- 2018
46. Cleaning without chlorinated solvents
- Author
-
Thompson, L. M and Simandl, R. F
- Subjects
Nonmetallic Materials - Abstract
Because of health and environmental concerns, many regulations have been passed in recent years regarding the use of chlorinated solvents. The Oak Ridge Y-12 Plant has had an active program to find alternatives for these solvents used in cleaning applications for the past 7 years. During this time frame, the quantity of solvents purchased has been reduced by 92 percent. The program has been a twofold effort. Vapor degreasers used in batch cleaning operations have been replaced by ultrasonic cleaning with aqueous detergent, and other organic solvents have been identified for use in hand-wiping or specialty operations. In order to qualify these alternatives for use, experimentation was conducted on cleaning ability as well as effects on subsequent operations such as welding, painting, and bonding. Cleaning ability was determined using techniques such as x-ray photoelectron spectroscopy (XPS) and Fourier transform infrared spectroscopy (FTIR) which are capable of examining monolayer levels of contamination on a surface. Solvents have been identified for removal of rust preventative oils, lapping oils, machining coolants, lubricants, greases, and mold releases. Solvents have also been evaluated for cleaning urethane foam spray guns, swelling of urethanes, and swelling of epoxies.
- Published
- 1995
47. A microwave plasma cleaning apparatus
- Author
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Tsai, C. C, Nelson, W. D, Schechter, D. E, Thompson, L. M, and Glover, A. L
- Subjects
Plasma Physics - Abstract
In a microwave electron cyclotron resonance plasma source, reactive plasmas of oxygen and its mixtures of argon have been used for evaluating plasma cleaning technologies. Small aluminum samples (0.95 x 1.9 cm) were coated with thin films (less than or equal to 20 micrometers in thickness) of Shell Vitrea oil and cleaned with reactive plasmas. The discharge parameters, such as gas pressure, magnetic field, substrate biasing, and microwave power, were varied to change cleaning conditions. A mass spectroscopy (or residual gas analyzer) was used to monitor the status of plasma cleaning. Mass loss of the samples after plasma cleaning was measured to estimate cleaning rates. Measured cleaning rates of low-pressure (0.5-m torr) argon/oxygen plasmas were as high as 2.7 micrometers/min. X-ray photoelectron spectroscopy was used to determine cleanliness of the sample surfaces. In this paper, significant results of the plasma cleaning are reported and discussed.
- Published
- 1995
48. Evolved Gas Analyses of Sedimentary Rocks and Eolian Sediment in Gale Crater, Mars: Results of the Curiosity Rover's Sample Analysis at Mars (SAM) Instrument from Yellowknife Bay to the Namib Dune
- Author
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Sutter, B., McAdam, A. C., Mahaffy, P. R., Ming, D. W., Edgett, K. S., Rampe, E. B., Eigenbrode, J. L., Franz, H. B., Freissinet, C., Grotzinger, J. P., Steele, A., House, C. H., Archer, P. D., Malespin, C. A., Navarro-González, R., Stern, J. C., Bell, J. F., Calef, F. J., Gellert, R., Glavin, D. P., Thompson, L. M., and Yen, A. S.
- Abstract
The Sample Analysis at Mars instrument evolved gas analyzer (SAM-EGA) has detected evolved water, H_2, SO_2, H_2S, NO, CO_2, CO, O_2 and HCl from two eolian sediments and nine sedimentary rocks from Gale Crater, Mars. These evolved gas detections indicate nitrates, organics, oxychlorine phase, and sulfates are widespread with phyllosilicates and carbonates occurring in select Gale Crater materials. Coevolved CO_2 (160 ± 248 - 2373 ± 820 μgC_((CO2))/g), and CO (11 ± 3 - 320 ± 130 μgC(CO)/g) suggest organic-C is present in Gale Crater materials. Five samples evolved CO_2 at temperatures consistent with carbonate (0.32± 0.05 - 0.70± 0.1 wt.% CO_3). Evolved NO amounts to 0.002 ± 0.007 - 0.06 ± 0.03 wt.% NO_3. Evolution of O_2 suggests oxychlorine phases (chlorate/perchlorate) (0.05 ± 0.025 - 1.05 ± 0.44wt. % ClO_4) are present while SO_2 evolution indicates the presence of crystalline and/or poorly crystalline Fe- and Mg-sulfate and possibly sulfide. Evolved H_2O (0.9 ± 0.3 - 2.5 ± 1.6 wt.% H_2O) is consistent with the presence of adsorbed water, hydrated salts, interlayer/structural water from phyllosilicates, and possible inclusion water in mineral/amorphous phases. Evolved H_2 and H_2S suggest reduced phases occur despite the presence of oxidized phases (nitrate, oxychlorine, sulfate, carbonate). SAM results coupled with CheMin mineralogical and APXS elemental analyses indicate that Gale Crater sedimentary rocks have experienced a complex authigenetic/diagenetic history involving fluids with varying pH, redox, and salt composition. The inferred geochemical conditions were favorable for microbial habitability and if life ever existed, there was likely sufficient organic-C to support a small microbial population.
- Published
- 2017
49. Sorting out Compositional Trends in Sedimentary Rocks of the Bradbury Group (Aeolus Palus), Gale Crater, Mars
- Author
-
Siebach, K. L., Baker, M. B., Grotzinger, J. P., McLennan, S. M., Gellert, R., Thompson, L. M., and Hurowitz, J. A.
- Abstract
Sedimentary rocks are composed of detrital grains derived from source rocks, which are altered by chemical weathering, sorted during transport, and cemented during diagenesis. Fluvio-lacustrine sedimentary rocks of the Bradbury group, observed on the floor of Gale crater by the Curiosity rover during its first 860 Martian solar days, show trends in bulk chemistry that are consistent with sorting of mineral grains during transport. The Bradbury group rocks are uniquely suited for sedimentary provenance analysis because they appear to have experienced negligible cation loss (i.e., open-system chemical weathering) at the scale of the Alpha Particle X-ray Spectrometer bulk chemistry analyses based on low Chemical Index of Alteration values and successful modeling of >90% of the (volatile-free) targets as mixtures of primary igneous minerals. Significant compositional variability between targets is instead correlated to grain-size and textural characteristics of the rocks; the coarsest-grained targets are enriched in Al_2O_3, SiO_2, and Na_2O, whereas the finer-grained targets are enriched in mafic components. This is consistent with geochemical and mineralogical modeling of the segregation of coarse-grained plagioclase from finer-grained mafic minerals (e.g., olivine and pyroxenes), which would be expected from hydrodynamic sorting of the detritus from mechanical breakdown of subalkaline plagioclase-phyric basalts. While the presence of a distinctive K_2O-rich stratigraphic interval shows that input from at least one distinctive alkali-feldspar-rich protolith contributed to basin fill, the dominant compositional trends in the Bradbury group are consistent with sorting of detrital minerals during transport from relatively homogeneous plagioclase-phyric basalts.
- Published
- 2017
50. Chemical Diversity of Sands Within the Linear and Barchan Dunes of the Bagnold Dunes, Gale Crater, as Revealed by APXS Onboard Curiosity
- Author
-
O'Connell‐Cooper, C. D., primary, Thompson, L. M., additional, Spray, J. G., additional, Berger, J. A., additional, VanBommel, S. J., additional, Gellert, R., additional, Boyd, N. I., additional, and DeSouza, E., additional
- Published
- 2018
- Full Text
- View/download PDF
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