1,318 results on '"Thompson JF"'
Search Results
2. Multi-trait genetic analysis identifies auto-immune loci associated with cutaneous melanoma
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Liyanage, U, MacGregor, S, Bishop, DT, Shi, J, An, J, Ong, JS, Han, X, Scolyer, RA, Martin, NG, Medland, SE, Byrne, EM, Green, AC, Saw, RPM, Thompson, JF, Stretch, J, Spillane, A, Jiang, Y, Tian, C, 23andMe Research Team, Gordon, SG, Duffy, DL, Olsen, CM, Whiteman, DC, Long, GV, Iles, MM, Landi, MT, and Law, MH
- Abstract
Genome-wide association studies (GWAS) have identified a number of risk loci for cutaneous melanoma. Cutaneous melanoma shares overlapping genetic risk (genetic correlation) with a number of other traits, including with its risk factors such as sunburn propensity. This genetic correlation can be exploited to identify additional cutaneous melanoma risk loci by multi-trait analysis of GWAS (MTAG). We used bivariate LD-score regression to identify traits that are genetically correlated with clinically-confirmed cutaneous melanoma, and then used publicly available GWAS for these traits in a MTAG. MTAG allows GWAS to be combined while accounting for sample overlap and incomplete genetic correlation. We identified a total of 74 genome-wide independent loci; 19 of them were not previously reported in the input cutaneous melanoma GWAS-meta-analysis. 55 of these loci were replicated (P < 0.05/74), Bonferroni corrected P -value in two independent cutaneous melanoma replication cohorts from Melanoma Institute Australia and 23andMe, Inc. Among the new cutaneous melanoma loci are ones that have also been associated with autoimmune traits including rs715199 near LPP, and rs10858023 near AP4B1. Our analysis indicates genetic correlation between traits can be leveraged to identify new risk genes for cutaneous melanoma.
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- 2022
3. Outcomes with adjuvant anti-PD-1 therapy in patients with sentinel lymph node-positive melanoma without completion lymph node dissection
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Eroglu, Z, Broman, KK, Thompson, JF, Nijhuis, A, Hieken, TJ, Kottschade, L, Farma, JM, Hotz, M, Deneve, J, Fleming, M, Bartlett, EK, Sharma, A, Dossett, L, Hughes, T, Gyorki, DE, Downs, J, Karakousis, G, Song, Y, Lee, A, Berman, RS, van Akkooi, A, Stahlie, E, Han, D, Vetto, J, Beasley, G, Farrow, NE, Hui, JYC, Moncrieff, M, Nobes, J, Baecher, K, Perez, M, Lowe, M, Ollila, DW, Collichio, FA, Bagge, RO, Mattsson, J, Kroon, HM, Chai, H, Teras, J, Sun, J, Carr, MJ, Tandon, A, Babacan, NA, Kim, Y, Naqvi, M, Zager, J, Khushalani, N, Eroglu, Z, Broman, KK, Thompson, JF, Nijhuis, A, Hieken, TJ, Kottschade, L, Farma, JM, Hotz, M, Deneve, J, Fleming, M, Bartlett, EK, Sharma, A, Dossett, L, Hughes, T, Gyorki, DE, Downs, J, Karakousis, G, Song, Y, Lee, A, Berman, RS, van Akkooi, A, Stahlie, E, Han, D, Vetto, J, Beasley, G, Farrow, NE, Hui, JYC, Moncrieff, M, Nobes, J, Baecher, K, Perez, M, Lowe, M, Ollila, DW, Collichio, FA, Bagge, RO, Mattsson, J, Kroon, HM, Chai, H, Teras, J, Sun, J, Carr, MJ, Tandon, A, Babacan, NA, Kim, Y, Naqvi, M, Zager, J, and Khushalani, N
- Abstract
Until recently, most patients with sentinel lymph node-positive (SLN+) melanoma underwent a completion lymph node dissection (CLND), as mandated in published trials of adjuvant systemic therapies. Following multicenter selective lymphadenectomy trial-II, most patients with SLN+ melanoma no longer undergo a CLND prior to adjuvant systemic therapy. A retrospective analysis of clinical outcomes in SLN+ melanoma patients treated with adjuvant systemic therapy after July 2017 was performed in 21 international cancer centers. Of 462 patients who received systemic adjuvant therapy, 326 patients received adjuvant anti-PD-1 without prior immediate (IM) CLND, while 60 underwent IM CLND. With median follow-up of 21 months, 24-month relapse-free survival (RFS) was 67% (95% CI 62% to 73%) in the 326 patients. When the patient subgroups who would have been eligible for the two adjuvant anti-PD-1 clinical trials mandating IM CLND were analyzed separately, 24-month RFS rates were 64%, very similar to the RFS rates from those studies. Of these no-CLND patients, those with SLN tumor deposit >1 mm, stage IIIC/D and ulcerated primary had worse RFS. Of the patients who relapsed on adjuvant anti-PD-1, those without IM CLND had a higher rate of relapse in the regional nodal basin than those with IM CLND (46% vs 11%). Therefore, 55% of patients who relapsed without prior CLND underwent surgery including therapeutic lymph node dissection (TLND), with 30% relapsing a second time; there was no difference in subsequent relapse between patients who received observation vs secondary adjuvant therapy. Despite the increased frequency of nodal relapses, adjuvant anti-PD-1 therapy may be as effective in SLN+ pts who forego IM CLND and salvage surgery with TLND at relapse may be a viable option for these patients.
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- 2022
4. Cross-Platform Omics Prediction procedure: a statistical machine learning framework for wider implementation of precision medicine.
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Wang, KYX, Pupo, GM, Tembe, V, Patrick, E, Strbenac, D, Schramm, S-J, Thompson, JF, Scolyer, RA, Muller, S, Tarr, G, Mann, GJ, Yang, JYH, Wang, KYX, Pupo, GM, Tembe, V, Patrick, E, Strbenac, D, Schramm, S-J, Thompson, JF, Scolyer, RA, Muller, S, Tarr, G, Mann, GJ, and Yang, JYH
- Abstract
In this modern era of precision medicine, molecular signatures identified from advanced omics technologies hold great promise to better guide clinical decisions. However, current approaches are often location-specific due to the inherent differences between platforms and across multiple centres, thus limiting the transferability of molecular signatures. We present Cross-Platform Omics Prediction (CPOP), a penalised regression model that can use omics data to predict patient outcomes in a platform-independent manner and across time and experiments. CPOP improves on the traditional prediction framework of using gene-based features by selecting ratio-based features with similar estimated effect sizes. These components gave CPOP the ability to have a stable performance across datasets of similar biology, minimising the effect of technical noise often generated by omics platforms. We present a comprehensive evaluation using melanoma transcriptomics data to demonstrate its potential to be used as a critical part of a clinical screening framework for precision medicine. Additional assessment of generalisation was demonstrated with ovarian cancer and inflammatory bowel disease studies.
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- 2022
5. Surgical management of melanoma: have we made any progress in 100 years?
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Thompson, JF and Shaw, HM
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- 2006
6. Asking questions can help: development of a question prompt list for cancer patients seeing a surgeon
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McJannett, M, Butow, P, Tattersall, MHN, and Thompson, JF
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- 2003
7. Melanoma management in 2007. -letter
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Uren, RF, Connelly, TJ, Diminic, K, Kefford, RF, Scolyer, RA, Thompson, JF, Paul, SP, Dixon, AJ, and Cleaver, LJ
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- 2007
8. Surveillance of Sentinel Node-Positive Melanoma Patients with Reasons for Exclusion from MSLT-II: Multi-Institutional Propensity Score Matched Analysis
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Broman, KK, Hughes, TM, Dossett, LA, Sun, J, Carr, MJ, Kirichenko, DA, Sharma, A, Bartlett, EK, Nijhuis, AAG, Thompson, JF, Hieken, TJ, Kottschade, L, Downs, J, Gyorki, DE, Gyorki, JJ, Stahlie, E, van Akkooi, A, Ollila, DW, Frank, J, Song, Y, Karakousis, G, Moncrieff, M, Nobes, J, Vetto, J, Han, D, Farma, J, Deneve, JL, Fleming, MD, Perez, M, Baecher, K, Lowe, M, Bagge, RO, Mattsson, J, Lee, AY, Berman, RS, Chai, H, Kroon, HM, Teras, RM, Teras, J, Farrow, NE, Beasley, GM, Hui, JYC, Been, L, Kruijff, S, Boulware, D, Sarnaik, AA, Sondak, VK, Zager, JS, Broman, KK, Hughes, TM, Dossett, LA, Sun, J, Carr, MJ, Kirichenko, DA, Sharma, A, Bartlett, EK, Nijhuis, AAG, Thompson, JF, Hieken, TJ, Kottschade, L, Downs, J, Gyorki, DE, Gyorki, JJ, Stahlie, E, van Akkooi, A, Ollila, DW, Frank, J, Song, Y, Karakousis, G, Moncrieff, M, Nobes, J, Vetto, J, Han, D, Farma, J, Deneve, JL, Fleming, MD, Perez, M, Baecher, K, Lowe, M, Bagge, RO, Mattsson, J, Lee, AY, Berman, RS, Chai, H, Kroon, HM, Teras, RM, Teras, J, Farrow, NE, Beasley, GM, Hui, JYC, Been, L, Kruijff, S, Boulware, D, Sarnaik, AA, Sondak, VK, and Zager, JS
- Abstract
BACKGROUND: In sentinel lymph node (SLN)-positive melanoma, two randomized trials demonstrated equivalent melanoma-specific survival with nodal surveillance vs completion lymph node dissection (CLND). Patients with microsatellites, extranodal extension (ENE) in the SLN, or >3 positive SLNs constitute a high-risk group largely excluded from the randomized trials, for whom appropriate management remains unknown. STUDY DESIGN: SLN-positive patients with any of the three high-risk features were identified from an international cohort. CLND patients were matched 1:1 with surveillance patients using propensity scores. Risk of any-site recurrence, SLN-basin-only recurrence, and melanoma-specific mortality were compared. RESULTS: Among 1,154 SLN-positive patients, 166 had ENE, microsatellites, and/or >3 positive SLN. At 18.5 months median follow-up, 49% had recurrence (vs 26% in patients without high-risk features, p < 0.01). Among high-risk patients, 52 (31%) underwent CLND and 114 (69%) received surveillance. Fifty-one CLND patients were matched to 51 surveillance patients. The matched cohort was balanced on tumor, nodal, and adjuvant treatment factors. There were no significant differences in any-site recurrence (CLND 49%, surveillance 45%, p = 0.99), SLN-basin-only recurrence (CLND 6%, surveillance 14%, p = 0.20), or melanoma-specific mortality (CLND 14%, surveillance 12%, p = 0.86). CONCLUSIONS: SLN-positive patients with microsatellites, ENE, or >3 positive SLN constitute a high-risk group with a 2-fold greater recurrence risk. For those managed with nodal surveillance, SLN-basin recurrences were more frequent, but all-site recurrence and melanoma-specific mortality were comparable to patients treated with CLND. Most recurrences were outside the SLN-basin, supporting use of nodal surveillance for SLN-positive patients with microsatellites, ENE, and/or >3 positive SLN.
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- 2021
9. Desmoplastic melanoma: a review of its pathology and clinical behaviour, and of management recommendations in published guidelines
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Hughes, TM, Williams, GJ, Gyorki, DE, Kelly, JW, Stretch, JR, Varey, AHR, Hong, AM, Scolyer, RA, Thompson, JF, Hughes, TM, Williams, GJ, Gyorki, DE, Kelly, JW, Stretch, JR, Varey, AHR, Hong, AM, Scolyer, RA, and Thompson, JF
- Abstract
Desmoplastic melanomas are uncommon. Their behaviour differs from that of other melanoma subtypes; therefore, management guidelines for non-desmoplastic melanomas may not be applicable. This review sought to examine all available evidence relating to the behaviour and management of desmoplastic melanomas, based on review of all relevant English-language publications, and to critically assess the recommendations for their management in current published melanoma management guidelines. Compared with other melanoma subtypes, patients with 'pure' desmoplastic melanomas (where ≥90% of the invasive melanoma is of desmoplastic melanoma subtype) have much lower rates of sentinel node positivity and distant metastasis. Local recurrence rates are higher for desmoplastic melanomas, but resection margins wider than those recommended for non-desmoplastic melanomas have not been shown to be of benefit. Adjuvant radiotherapy reduces the risk of local recurrence when a satisfactory histological clearance (≥8 mm) cannot be achieved. Of 29 published melanoma management guidelines identified, only 11 specified management for desmoplastic melanomas, while seven simply stated that the feature should be reported. Desmoplastic melanoma is a unique melanoma subtype with biology that differs from that of other melanoma subtypes. It requires specific management strategies but few current guidelines address these.
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- 2021
10. Active surveillance of patients who have sentinel node positive melanoma: An international, multi-institution evaluation of adoption and early outcomes after the Multicenter Selective Lymphadenectomy trial II (MSLT-2)
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Broman, KK, Hughes, T, Dossett, L, Sun, J, Kirichenko, D, Carr, MJ, Sharma, A, Bartlett, EK, Nijhuis, AAG, Thompson, JF, Hieken, TJ, Kottschade, L, Downs, J, Gyorki, DE, Stahlie, E, van Akkooi, A, Ollila, DW, Frank, J, Song, Y, Karakousis, G, Moncrieff, M, Nobes, J, Vetto, J, Han, D, Farma, JM, Deneve, JL, Fleming, MD, Perez, MC, Lowe, MC, Olofsson Bagge, R, Mattsson, J, Lee, AY, Berman, RS, Chai, H, Kroon, HM, Teras, J, Teras, RM, Farrow, NE, Beasley, G, Hui, JYC, Been, L, Kruijff, S, Kim, Y, Naqvi, SMH, Sarnaik, AA, Sondak, VK, Zager, JS, Broman, KK, Hughes, T, Dossett, L, Sun, J, Kirichenko, D, Carr, MJ, Sharma, A, Bartlett, EK, Nijhuis, AAG, Thompson, JF, Hieken, TJ, Kottschade, L, Downs, J, Gyorki, DE, Stahlie, E, van Akkooi, A, Ollila, DW, Frank, J, Song, Y, Karakousis, G, Moncrieff, M, Nobes, J, Vetto, J, Han, D, Farma, JM, Deneve, JL, Fleming, MD, Perez, MC, Lowe, MC, Olofsson Bagge, R, Mattsson, J, Lee, AY, Berman, RS, Chai, H, Kroon, HM, Teras, J, Teras, RM, Farrow, NE, Beasley, G, Hui, JYC, Been, L, Kruijff, S, Kim, Y, Naqvi, SMH, Sarnaik, AA, Sondak, VK, and Zager, JS
- Abstract
BACKGROUND: For patients with sentinel lymph node (SLN)-positive cutaneous melanoma, the Second Multicenter Selective Lymphadenectomy trial demonstrated equivalent disease-specific survival (DSS) with active surveillance using nodal ultrasound versus completion lymph node dissection (CLND). Adoption and outcomes of active surveillance in clinical practice and in adjuvant therapy recipients are unknown. METHODS: In a retrospective cohort of SLN-positive adults treated at 21 institutions in Australia, Europe, and the United States from June 2017 to November 2019, the authors evaluated the impact of active surveillance and adjuvant therapy on all-site recurrence-free survival (RFS), isolated nodal RFS, distant metastasis-free survival (DMFS), and DSS using Kaplan-Meier curves and Cox proportional hazard models. RESULTS: Among 6347 SLN biopsies, 1154 (18%) were positive and had initial negative distant staging. In total, 965 patients (84%) received active surveillance, 189 (16%) underwent CLND. Four hundred thirty-nine patients received adjuvant therapy (surveillance, 38%; CLND, 39%), with the majority (83%) receiving anti-PD-1 immunotherapy. After a median follow-up of 11 months, 220 patients developed recurrent disease (surveillance, 19%; CLND, 22%), and 24 died of melanoma (surveillance, 2%; CLND, 4%). Sixty-eight patients had an isolated nodal recurrence (surveillance, 6%; CLND, 4%). In patients who received adjuvant treatment without undergoing prior CLND, all isolated nodal recurrences were resectable. On risk-adjusted multivariable analyses, CLND was associated with improved isolated nodal RFS (hazard ratio [HR], 0.36; 95% CI, 0.15-0.88), but not all-site RFS (HR, 0.68; 95% CI, 0.45-1.02). Adjuvant therapy improved all-site RFS (HR, 0.52; 95% CI, 0.47-0.57). DSS and DMFS did not differ by nodal management or adjuvant treatment. CONCLUSIONS: Active surveillance has been adopted for most SLN-positive patients. At initial assessment, real-world outcomes align with r
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- 2021
11. Contemporary management of locoregionally advanced melanoma in Australia and New Zealand and the role of adjuvant systemic therapy
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Smithers, BM, Saw, RPM, Gyorki, DE, Martin, RCW, Atkinson, V, Haydon, A, Roberts-Thomson, R, Thompson, JF, Smithers, BM, Saw, RPM, Gyorki, DE, Martin, RCW, Atkinson, V, Haydon, A, Roberts-Thomson, R, and Thompson, JF
- Abstract
Australia and New Zealand have the highest incidence and mortality rates for melanoma in the world. Local surgery is still the standard treatment of primary cutaneous melanoma, and it is therefore important that surgeons understand the optimal care pathways for patients with melanoma. Accurate staging is critical to ensure a reliable assessment of prognosis and to guide treatment selection. Sentinel node biopsy (SNB) plays an important role in staging and the provision of reliable prognostic estimates for patients with cutaneous melanoma. Patients with stage III melanoma have a substantial risk of disease recurrence following surgery, leading to poor long-term outcomes. Systemic immunotherapies and targeted therapies, known to be effective for stage IV melanoma, have now also been shown to be effective as adjuvant post-surgical treatments for resected stage III melanoma. These patients should be made aware of this and preferably managed in an integrated multidisciplinary model of care, involving the surgeon, medical oncologists and radiation oncologists. This review considers the impact of a recent update to the American Joint Committee on Cancer (AJCC) staging system, the role of SNB for patients with high-risk primary melanoma and recent advances in adjuvant systemic therapies for high-risk patients.
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- 2021
12. Can patient-led surveillance detect subsequent new primary or recurrent melanomas and reduce the need for routinely scheduled follow-up? A protocol for the MEL-SELF randomised controlled trial
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Ackermann, DM, Smit, AK, Janda, M, van Kemenade, CH, Dieng, M, Morton, RL, Turner, RM, Cust, AE, Irwig, L, Hersch, JK, Guitera, P, Soyer, HP, Mar, V, Saw, RPM, Low, D, Low, C, Drabarek, D, Espinoza, D, Emery, J, Murchie, P, Thompson, JF, Scolyer, RA, Azzi, A, Lilleyman, A, Bell, KJL, Ackermann, DM, Smit, AK, Janda, M, van Kemenade, CH, Dieng, M, Morton, RL, Turner, RM, Cust, AE, Irwig, L, Hersch, JK, Guitera, P, Soyer, HP, Mar, V, Saw, RPM, Low, D, Low, C, Drabarek, D, Espinoza, D, Emery, J, Murchie, P, Thompson, JF, Scolyer, RA, Azzi, A, Lilleyman, A, and Bell, KJL
- Abstract
BACKGROUND: Most subsequent new primary or recurrent melanomas might be self-detected if patients are trained to systematically self-examine their skin and have access to timely medical review (patient-led surveillance). Routinely scheduled clinic visits (clinician-led surveillance) is resource-intensive and has not been shown to improve health outcomes; fewer visits may be possible if patient-led surveillance is shown to be safe and effective. The MEL-SELF trial is a randomised controlled trial comparing patient-led surveillance with clinician-led surveillance in people who have been previously treated for localised melanoma. METHODS: Stage 0/I/II melanoma patients (n = 600) from dermatology, surgical, or general practice clinics in NSW Australia, will be randomised (1:1) to the intervention (patient-led surveillance, n = 300) or control (usual care, n = 300). Patients in the intervention will undergo a second randomisation 1:1 to polarised (n = 150) or non-polarised (n = 150) dermatoscope. Patient-led surveillance comprises an educational booklet, skin self-examination (SSE) instructional videos; 3-monthly email/SMS reminders to perform SSE; patient-performed dermoscopy with teledermatologist feedback; clinical review of positive teledermoscopy through fast-tracked unscheduled clinic visits; and routinely scheduled clinic visits following each clinician's usual practice. Clinician-led surveillance comprises an educational booklet and routinely scheduled clinic visits following each clinician's usual practice. The primary outcome, measured at 12 months, is the proportion of participants diagnosed with a subsequent new primary or recurrent melanoma at an unscheduled clinic visit. Secondary outcomes include time from randomisation to diagnosis (of a subsequent new primary or recurrent melanoma and of a new keratinocyte cancer), clinicopathological characteristics of subsequent new primary or recurrent melanomas (including AJCC stage), psychological outcomes, and heal
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- 2021
13. Knowledge and attitudes of Australian dermatologists towards sentinel lymph node biopsy for melanoma: a mixed methods study.
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Smith, AL, Watts, CG, Robinson, S, Schmid, H, Goumas, C, Mar, VJ, Thompson, JF, Rapport, F, Australian Melanoma Centre of Research Excellence Study Group, Cust, AE, Smith, AL, Watts, CG, Robinson, S, Schmid, H, Goumas, C, Mar, VJ, Thompson, JF, Rapport, F, Australian Melanoma Centre of Research Excellence Study Group, and Cust, AE
- Abstract
BACKGROUND/OBJECTIVES: In melanoma management, sentinel lymph node biopsy (SLNB) is used to stage patients and to indicate prognosis. More recently, it has been used to select patients for adjuvant therapy. This study aimed to report knowledge of and attitudes towards SLNB for patients with melanoma among Australian dermatologists. METHODS: Mixed methods study using cross-sectional questionnaires (n = 88) and semi-structured interviews (n = 13), May-September 2019. RESULTS: Of the dermatologists surveyed, 56% thought SLNB had an important role in melanoma management, 26% were unsure and 18% thought SLNB unimportant. Of the 92% who would discuss SLNB with their patients, the main stated value of SLNB was for assessing eligibility for adjuvant therapies (79%); only 60% indicated SLNB was of value for providing prognostic information, and just over half (53%) thought it could improve staging. Interview data indicated that attitudes towards SLNB are shifting among dermatologists, driven by data from landmark clinical trials and the influence of professional networks. Accordingly, interviewees adopted one of three positions in relation to SLNB: (a) believed in utility of SLNB and adhered to the guidelines; (b) were unconvinced about utility of SLNB but adhered to the guidelines; and (c) were unconvinced about utility of SLNB and did not adhere to the guidelines. CONCLUSION: Although most of the dermatologists surveyed were familiar with and follow the SLNB recommendations, some disagreement with and distrust of the recommendations was evident. Greater acceptance of the SLNB recommendations appeared to be driven by the improved outcomes demonstrated in stage III patients receiving adjuvant systemic therapy.
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- 2021
14. Germline variants are associated with increased primary melanoma tumor thickness at diagnosis
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Mangantig, E, MacGregor, S, Iles, MM, Scolyer, RA, Cust, AE, Hayward, NK, Montgomery, GW, Duffy, DL, Thompson, JF, Henders, A, Bowdler, L, Rowe, C, Cadby, G, Mann, GJ, Whiteman, DC, Long, GV, Ward, SV, Khosrotehrani, K, Barrett, JH, and Law, MH
- Abstract
Germline genetic variants have been identified, which predispose individuals and families to develop melanoma. Tumor thickness is the strongest predictor of outcome for clinically localized primary melanoma patients. We sought to determine whether there is a heritable genetic contribution to variation in tumor thickness. If confirmed, this will justify the search for specific genetic variants influencing tumor thickness. To address this, we estimated the proportion of variation in tumor thickness attributable to genome-wide genetic variation (variant-based heritability) using unrelated patients with measured primary cutaneous melanoma thickness. As a secondary analysis, we conducted a genome-wide association study (GWAS) of tumor thickness. The analyses utilized 10 604 individuals with primary cutaneous melanoma drawn from nine GWAS datasets from eight cohorts recruited from the general population, primary care and melanoma treatment centers. Following quality control and filtering to unrelated individuals with study phenotypes, 8125 patients were used in the primary analysis to test whether tumor thickness is heritable. An expanded set of 8505 individuals (47.6% female) were analyzed for the secondary GWAS meta-analysis. Analyses were adjusted for participant age, sex, cohort and ancestry. We found that 26.6% (SE 11.9%, P = 0.0128) of variation in tumor thickness is attributable to genome-wide genetic variation. While requiring replication, a chromosome 11 locus was associated (P
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- 2020
15. Multiplex melanoma families are enriched for polygenic risk
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Law, MH, Aoude, LG, Duffy, DL, Long, GV, Johansson, PA, Pritchard, AL, Khosrotehrani, K, Mann, GJ, Montgomery, GW, Iles, MM, Cust, AE, Palmer, JM, Melanoma GWAS Consortium, Shannon, KF, Spillane, AJ, Stretch, JR, Thompson, JF, Saw, RPM, Scolyer, RA, Martin, NG, Hayward, NK, and MacGregor, S
- Subjects
neoplasms - Abstract
Cancers, including cutaneous melanoma, can cluster in families. In addition to environmental aetiological factors such as ultraviolet radiation, cutaneous melanoma has a strong genetic component. Genetic risks for cutaneous melanoma range from rare, high-penetrance mutations to common, low-penetrance variants. Known high-penetrance mutations account for only about half of all densely affected cutaneous melanoma families and the causes of familial clustering in the remainder is unknown. We hypothesise that some clustering is due to the cumulative effect of a large number of variants of individually small effect. Common, low-penetrance genetic risk variants can be combined into polygenic risk scores. We used a polygenic risk score for cutaneous melanoma to compare families without known high-penetrance mutations with unrelated melanoma cases and melanoma-free controls. Family members had significantly higher mean polygenic load for cutaneous melanoma than unrelated cases or melanoma-free healthy controls (Bonferroni corrected t-test P = 1.5 × 10−5 and 6.3 × 10−45, respectively). Whole genome sequencing of germline DNA from 51 members of 21 families with low polygenic risk for melanoma identified a CDKN2A p.G101W mutation in a single family but no other candidate new high-penetrance melanoma susceptibility genes. This work provides further evidence that melanoma, like many other common complex disorders, can arise from the joint action of multiple predisposing factors, including rare high-penetrance mutations, as well as via a combination of large numbers of alleles of small effect.
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- 2020
16. Identifying challenges to implementation of clinical practice guidelines for sentinel lymph node biopsy in patients with melanoma in Australia: protocol paper for a mixed methods study
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Rapport, F, Smith, AL, Cust, AE, Mann, GJ, Watts, CG, Gyorki, DE, Henderson, M, Hong, AM, Kelly, JW, Long, GV, Mar, VJ, Morton, RL, Saw, RPM, Scolyer, RA, Spillane, AJ, Thompson, JF, Braithwaite, J, Rapport, F, Smith, AL, Cust, AE, Mann, GJ, Watts, CG, Gyorki, DE, Henderson, M, Hong, AM, Kelly, JW, Long, GV, Mar, VJ, Morton, RL, Saw, RPM, Scolyer, RA, Spillane, AJ, Thompson, JF, and Braithwaite, J
- Abstract
INTRODUCTION: Sentinel lymph node biopsy (SLNB) is a diagnostic procedure developed in the 1990s. It is currently used to stage patients with primary cutaneous melanoma, provide prognostic information and guide management. The Australian Clinical Practice Guidelines state that SLNB should be considered for patients with cutaneous melanoma >1 mm in thickness (or >0.8 mm with high-risk pathology features). Until recently, sentinel lymph node (SLN) status was used to identify patients who might benefit from a completion lymph node dissection, a procedure that is no longer routinely recommended. SLN status is now also being used to identify patients who might benefit from systemic adjuvant therapies such as anti-programmed cell death 1 (PD1) checkpoint inhibitor immunotherapy or BRAF-directed molecular targeted therapy, treatments that have significantly improved relapse-free survival for patients with resected stage III melanoma and improved overall survival of patients with unresectable stage III and stage IV melanoma. Australian and international data indicate that approximately half of eligible patients receive an SLNB. METHODS AND ANALYSIS: This mixed-methods study seeks to understand the structural, contextual and cultural factors affecting implementation of the SLNB guidelines. Data collection will include: (1) cross-sectional questionnaires and semistructured interviews with general practitioners and dermatologists; (2) semistructured interviews with other healthcare professionals involved in the diagnosis and early definitive care of melanoma patients and key stakeholders including researchers, representatives of professional colleges, training organisations and consumer melanoma groups; and (3) documentary analysis of documents from government, health services and non-government organisations. Descriptive analyses and multivariable regression models will be used to examine factors related to SLNB practices and attitudes. Qualitative data will be analysed using
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- 2020
17. Results of a randomized, double-blind phase II clinical trial of NY-ESO-1 vaccine with ISCOMATRIX adjuvant versus ISCOMATRIX alone in participants with high-risk resected melanoma
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Cebon, JS, Gore, M, Thompson, JF, Davis, ID, McArthur, GA, Walpole, E, Smithers, M, Cerundolo, V, Dunbar, PR, MacGregor, D, Fisher, C, Millward, M, Nathan, P, Findlay, MPN, Hersey, P, Evans, TRJ, Ottensmeier, CH, Marsden, J, Dalgleish, AG, Corrie, PG, Maria, M, Brimble, M, Williams, G, Winkler, S, Jackson, HM, Endo-Munoz, L, Tutuka, CSA, Venhaus, R, Old, LJ, Haack, D, Maraskovsky, E, Behren, A, Chen, W, Cebon, JS, Gore, M, Thompson, JF, Davis, ID, McArthur, GA, Walpole, E, Smithers, M, Cerundolo, V, Dunbar, PR, MacGregor, D, Fisher, C, Millward, M, Nathan, P, Findlay, MPN, Hersey, P, Evans, TRJ, Ottensmeier, CH, Marsden, J, Dalgleish, AG, Corrie, PG, Maria, M, Brimble, M, Williams, G, Winkler, S, Jackson, HM, Endo-Munoz, L, Tutuka, CSA, Venhaus, R, Old, LJ, Haack, D, Maraskovsky, E, Behren, A, and Chen, W
- Abstract
BACKGROUND: To compare the clinical efficacy of New York Esophageal squamous cell carcinoma-1 (NY-ESO-1) vaccine with ISCOMATRIX adjuvant versus ISCOMATRIX alone in a randomized, double-blind phase II study in participants with fully resected melanoma at high risk of recurrence. METHODS: Participants with resected stage IIc, IIIb, IIIc and IV melanoma expressing NY-ESO-1 were randomized to treatment with three doses of NY-ESO-1/ISCOMATRIX or ISCOMATRIX adjuvant administered intramuscularly at 4-week intervals, followed by a further dose at 6 months. Primary endpoint was the proportion free of relapse at 18 months in the intention-to-treat (ITT) population and two per-protocol populations. Secondary endpoints included relapse-free survival (RFS) and overall survival (OS), safety and NY-ESO-1 immunity. RESULTS: The ITT population comprised 110 participants, with 56 randomized to NY-ESO-1/ISCOMATRIX and 54 to ISCOMATRIX alone. No significant toxicities were observed. There were no differences between the study arms in relapses at 18 months or for median time to relapse; 139 vs 176 days (p=0.296), or relapse rate, 27 (48.2%) vs 26 (48.1%) (HR 0.913; 95% CI 0.402 to 2.231), respectively. RFS and OS were similar between the study arms. Vaccine recipients developed strong positive antibody responses to NY-ESO-1 (p≤0.0001) and NY-ESO-1-specific CD4+ and CD8+ responses. Biopsies following relapse did not demonstrate differences in NY-ESO-1 expression between the study populations although an exploratory study demonstrated reduced (NY-ESO-1)+/Human Leukocyte Antigen (HLA) class I+ double-positive cells in biopsies from vaccine recipients performed on relapse in 19 participants. CONCLUSIONS: The vaccine was well tolerated, however, despite inducing antigen-specific immunity, it did not affect survival endpoints. Immune escape through the downregulation of NY-ESO-1 and/or HLA class I molecules on tumor may have contributed to relapse.
- Published
- 2020
18. Phase‐3 international trial of adjuvant whole brain radiotherapy (WBRT) or observation (Obs) following local treatment of 1‐3 melanoma brain metastases (MBMs)
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Fogarty, GB, Dolven-Jacobsen, K, Morton, RL, Hruby, G, Nowak, AK, Vardy, JL, Drummond, KJ, Dhillon, HM, Mandel, C, Scolyer, RA, Shivalingam, B, Middleton, MR, Burmeister, B, Roos, DE, Lo, SN, Reisse, CH, Paton, EJ, Williams, NC, Thompson, JF, and Hong, A
- Published
- 2019
- Full Text
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19. False-Positive Results and Incidental Findings with Annual CT or PET/CT Surveillance in Asymptomatic Patients with Resected Stage III Melanoma
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Nijhuis AAG, Dieng M, Khanna N, Lord SJ, Dalton J, Menzies AM, Turner RM, Allen J, Saw RPM, Nieweg OE, Thompson JF, and Morton RL
- Subjects
Male ,Incidental Findings ,nutritional and metabolic diseases ,Middle Aged ,Positron Emission Tomography Computed Tomography ,Humans ,1112 Oncology and Carcinogenesis ,False Positive Reactions ,Female ,Oncology & Carcinogenesis ,Prospective Studies ,Neoplasm Recurrence, Local ,Radiopharmaceuticals ,Melanoma ,Neoplasm Staging ,Follow-Up Studies - Abstract
The aim of this study was to quantify false-positive and incidental findings from annual surveillance imaging in asymptomatic, American Joint Committee on Cancer stage III melanoma patients.
- Published
- 2019
20. Distinct Immune Cell Populations Define Response to Anti-PD-1 Monotherapy and Anti-PD-1/Anti-CTLA-4 Combined Therapy
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Gide, TN, Quek, C, Menzies, AM, Tasker, AT, Shang, P, Holst, J, Madore, J, Lim, SY, Velickovic, R, Wongchenko, M, Yan, Y, Lo, S, Carlino, MS, Guminski, A, Saw, RPM, Pang, A, McGuire, HM, Palendira, U, Thompson, JF, Rizos, H, Silva, IPD, Batten, M, Scolyer, RA, Long, GV, Wilmott, JS, Gide, TN, Quek, C, Menzies, AM, Tasker, AT, Shang, P, Holst, J, Madore, J, Lim, SY, Velickovic, R, Wongchenko, M, Yan, Y, Lo, S, Carlino, MS, Guminski, A, Saw, RPM, Pang, A, McGuire, HM, Palendira, U, Thompson, JF, Rizos, H, Silva, IPD, Batten, M, Scolyer, RA, Long, GV, and Wilmott, JS
- Abstract
Cancer immunotherapies provide survival benefits in responding patients, but many patients fail to respond. Identifying the biology of treatment response and resistance are a priority to optimize drug selection and improve patient outcomes. We performed transcriptomic and immune profiling on 158 tumor biopsies from melanoma patients treated with anti-PD-1 monotherapy (n = 63) or combined anti-PD-1 and anti-CTLA-4 (n = 57). These data identified activated T cell signatures and T cell populations in responders to both treatments. Further mass cytometry analysis identified an EOMES+CD69+CD45RO+ effector memory T cell phenotype that was significantly more abundant in responders to combined immunotherapy compared with non-responders (n = 18). The gene expression profile of this population was associated with longer progression-free survival in patients treated with single agent and greater tumor shrinkage in both treatments.
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- 2019
21. New treatment paradigms for clinically apparent metastatic melanoma in regional lymph nodes
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Henderson, MA, Spillane, J, Hughes, TM, Spillane, AJ, Smithers, BM, Thompson, JF, Henderson, MA, Spillane, J, Hughes, TM, Spillane, AJ, Smithers, BM, and Thompson, JF
- Published
- 2019
22. Whole brain radiotherapy (WBRT) after local treatment of brain metastases in melanoma patients: Statistical Analysis Plan
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Lo, SN, Hong, AM, Haydu, LE, Ahmed, T, Paton, EJ, Steel, V, Hruby, G, Anh, T, Morton, RL, Nowak, AK, Vardy, JL, Drummond, KJ, Dhillon, HM, Mandel, C, Scolyer, RA, Middleton, MR, Burmeister, BH, Thompson, JF, Fogarty, GB, Lo, SN, Hong, AM, Haydu, LE, Ahmed, T, Paton, EJ, Steel, V, Hruby, G, Anh, T, Morton, RL, Nowak, AK, Vardy, JL, Drummond, KJ, Dhillon, HM, Mandel, C, Scolyer, RA, Middleton, MR, Burmeister, BH, Thompson, JF, and Fogarty, GB
- Abstract
BACKGROUND: The WBRTMel trial is a multinational, open-label, phase III randomised controlled trial comparing whole brain radiotherapy (WBRT) to observation following local treatment of one to three melanoma brain metastases with surgery and/or stereotactic irradiation. The primary trial endpoint was to determine the effect of adding WBRT to local treatment on distant intracranial control, and the secondary endpoints were neurocognitive function, quality of life (QoL), performance status, overall survival, death from intracranial causes, death from melanoma and cost-effectiveness. OBJECTIVE: The objective of this update is to outline and publish the pre-determined statistical analysis plan (SAP) before the database lock and the start of analysis. METHODS: The SAP describes basic analysis principles, methods for dealing with a range of commonly encountered data analysis issues and the specific statistical procedures for analysing efficacy and safety outcomes. The SAP was approved after closure of recruitment and before completion of patient follow-up. It outlines the planned primary analyses and a range of subgroup and sensitivity analyses regarding the clinical and QoL outcomes. Health economic outcomes are not included in this plan but will be analysed separately. The SAP will be adhered to for the final data analysis of this trial to avoid analysis bias arising from knowledge of the data. RESULTS: The resulting SAP is consistent with best practice and will allow open and transparent reporting. CONCLUSION: We have developed a SAP for the WBRTMel trial which will be followed to ensure high-quality standards of internal validity to minimise analysis bias. TRIAL REGISTRATION: ANZ Clinical Trials Registry, ACTRN12607000512426 . Registered on 9 October 2007. ClinicalTrials.gov, NCT01503827 . Registered on 4 January 2012. Trial group reference numbers ANZMTG 01.07, TROG 08.05.
- Published
- 2019
23. RAB27A promotes melanoma cell invasion and metastasis via regulation of pro-invasive exosomes
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Guo, D, Lui, GYL, Lai, SL, Wilmott, JS, Tikoo, S, Jackett, LA, Quek, C, Brown, DL, Sharp, DM, Kwan, RYQ, Chacon, D, Wong, JH, Beck, D, van Geldermalsen, M, Holst, J, Thompson, JF, Mann, GJ, Scolyer, RA, Stow, JL, Weninger, W, Haass, NK, Beaumont, KA, Guo, D, Lui, GYL, Lai, SL, Wilmott, JS, Tikoo, S, Jackett, LA, Quek, C, Brown, DL, Sharp, DM, Kwan, RYQ, Chacon, D, Wong, JH, Beck, D, van Geldermalsen, M, Holst, J, Thompson, JF, Mann, GJ, Scolyer, RA, Stow, JL, Weninger, W, Haass, NK, and Beaumont, KA
- Abstract
© 2018 UICC Despite recent advances in targeted and immune-based therapies, advanced stage melanoma remains a clinical challenge with a poor prognosis. Understanding the genes and cellular processes that drive progression and metastasis is critical for identifying new therapeutic strategies. Here, we found that the GTPase RAB27A was overexpressed in a subset of melanomas, which correlated with poor patient survival. Loss of RAB27A expression in melanoma cell lines inhibited 3D spheroid invasion and cell motility in vitro, and spontaneous metastasis in vivo. The reduced invasion phenotype was rescued by RAB27A-replete exosomes, but not RAB27A-knockdown exosomes, indicating that RAB27A is responsible for the generation of pro-invasive exosomes. Furthermore, while RAB27A loss did not alter the number of exosomes secreted, it did change exosome size and altered the composition and abundance of exosomal proteins, some of which are known to regulate cancer cell movement. Our data suggest that RAB27A promotes the biogenesis of a distinct pro-invasive exosome population. These findings support RAB27A as a key cancer regulator, as well as a potential prognostic marker and therapeutic target in melanoma.
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- 2019
24. Trainee perceptions on the usefulness of Virtual Patients and other support during the pre-registration year
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Thompson, JF, White, S, and Chapman, S
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R1 ,RS - Abstract
No abstract
- Published
- 2017
25. Diagnosis and clinical management of melanoma patients at higher risk of a new primary melanoma: A population-based study in New South Wales, Australia.
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Watts, CG, Madronio, CM, Morton, RL, Goumas, C, Armstrong, BK, Curtin, A, Menzies, SW, Mann, GJ, Thompson, JF, Cust, AE, Watts, CG, Madronio, CM, Morton, RL, Goumas, C, Armstrong, BK, Curtin, A, Menzies, SW, Mann, GJ, Thompson, JF, and Cust, AE
- Abstract
BACKGROUND/OBJECTIVES: To describe the method of diagnosis, clinical management and adherence to clinical practice guidelines for melanoma patients at high risk of a subsequent primary melanoma, and compare this with melanoma patients at lower risk. METHODS: The Melanoma Patterns of Care study was a population-based, observational study based on doctors' reported clinical management of melanoma patients in New South Wales, Australia, diagnosed with in situ or invasive melanoma over a 12-month period from October 2006. Of 2605 patients with localised melanoma, 1019 (39%) were defined as at higher risk due to the presence of one or more of the following factors: a family history of melanoma (11%), multiple primary melanomas (17%), or many naevi (24%). RESULTS: Compared to patients at lower risk, high risk patients were more likely to receive their initial care from a primary care physician (56% vs 50%, P = 0.002), have their melanoma detected during a routine skin check (40% vs 33%, P < 0.001), have their lesion assessed with dermoscopy (63% vs 56%, P = 0.002), and be encouraged to have skin surveillance (84% vs 77%, P < 0.001) and skin self-examination (87% vs 83%, P = 0.03). Higher socioeconomic status and urban residence were associated with patients at higher risk receiving initial treatment from a specialist doctor. CONCLUSIONS: Clinical management of higher risk patients was more likely to conform to clinical practice guidelines for diagnosis and skin surveillance than to melanoma patients at lower risk.
- Published
- 2017
26. When is a sentinel node biopsy indicated for patients with primary melanoma? An update of the 'Australian guidelines for the management of cutaneous melanoma'
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Gyorki, DE, Barbour, A, Hanikeri, M, Mar, V, Sandhu, S, Thompson, JF, Gyorki, DE, Barbour, A, Hanikeri, M, Mar, V, Sandhu, S, and Thompson, JF
- Abstract
A sentinel lymph node biopsy is a surgical staging procedure performed for patients with primary cutaneous melanoma who are clinically lymph-node negative to determine whether there is low volume nodal metastasis in the draining lymph node field. A systematic review was recently performed to update the Australian clinical practice guidelines for the diagnosis and management of melanoma, addressing the question, 'When is a sentinel lymph node biopsy indicated?' This article discusses the findings of the systematic review and the evidence base for the updated guidelines.
- Published
- 2017
27. A qualitative study of the perspectives of pre-registration students on the use of virtual patients as a novel educational tool
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Thompson, JF, White, S, and Chapman, S
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RS - Published
- 2016
28. 10-year stroke prevention after successful carotid endarterectomy for asymptomatic stenosis (ACST-1): a multicentre randomised trial
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Halliday, A, Harrison, M, Hayter, E, Kong, X, Mansfield, A, Marro, J, Pan, H, Peto, R, Potter, J, Rahimi, K, Rau, A, Robertson, S, Streifler, J, Thomas, D, Fraedrich G, Asymptomatic Carotid Surgery Trial Collaborative G. r. o. u. p., Schmidauer, C, Hölzenbein, Th, Huk, I, Haumer, M, Kretschmer, G, Metz, V, Polterauer, P, Teufelsbauer, H, Cras, P, Hendriks, J, Lauwers, P, Van Schil, P, de Souza EB, Dourado, Me, Gurgel, G, Rocha, Gm, Petrov, V, Slabakov, G, Cooper, Me, Gubitz, G, Holness, R, Howes, W, Langille, R, Legg, K, Nearing, S, Mackean, G, Mackay, M, Phillips, Sj, Sullivan, J, Wood, J, Erdelez, L, Sosa, T, Angelides, Ns, Christopoulos, G, Malikidou, A, Pesta, A, Ambler, Z, Mracek, J, Polivka, J, Rohan, V, Sevcik, P, Simaná, J, Benes, V, Kramár, F, Kaste, M, Lepäntalo, M, Soinne, L, Cardon, Jm, Legalou, A, Gengenbach, B, Pfadenhauer, K, Wölfl, Kd, Flessenkämper, I, Klumpp, Bf, Marsch, J, Kolvenbach, R, Pfeiff, T, Sandmann, W, Beyersdorf, F, Hetzel, A, Sarai, K, Schöllhorn, J, Spillner, G, Lutz, Hj, Böckler, D, Maeder, N, Busse, O, Grönniger, J, Haukamp, F, Balzer, K, Knoob, Hg, Roedig, G, Virreira, L, Franke, S, Moll, R, Schneider, J, Dayantas, J, Sechas, Mn, Tsiaza, S, Kiskinis, D, Apor, A, Dzinich, C, Entz, L, Hüttl, K, Jàrànyi, Z, Mogan, I, Nagy, Z, Szabo, A, Varga, D, Juhász, G, Mátyás, L, Hutchinson, M, Mehigan, D, Aladjem, Z, Harah, E, Elmakias, S, Gurvich, D, Yoffe, B, Ben Meir, H, Dagan, L, Karmeli, R, Keren, G, Shimony, A, Weller, B, Avrahami, R, Koren, R, Streifler, Jy, Tabachnik, S, Zelikovski, A, Angiletta, D, Federico, F, Impedovo, G, Marotta, V, Pascazio, L, Regina, G, Andreoli, A, Pozzati, E, Bonardelli, S, Giulini, Sm, Guarneri, B, Caiazzo, P, Mascoli, F, Becchi, G, Masini, R, Santoro, E, Simoni, G, Ventura, M, Scarpelli, P, Spartera, C, Arena, O, Collice, M, Puttini, M, Romani, F, Santilli, I, Segramora, V, Sterzi, R, Deriu, G, Verlato, F, Cao, Pg, Cieri, Enrico, De Rango, P, Moggi, L, Ricci, S, Antico, A, Spigonardo, F, Malferrari, G, Tusini, N, Vecchiati, E, Cavallaro, A, Kasemi, H, Marino, M, Sbarigia, E, Speziale, F, Zinicola, N, Alò, Fp, Bartolini, M, Carbonari, L, Caporelli, S, Grili Cicilioni, C, Lagalla, G, Ioannidis, G, Pagliariccio, G, Silvestrini, M, Palombo, D, Peinetti, F, Adovasio, R, Chiodo Grandi, F, Mase, G, Zamolo, F, Fregonese, V, Gonano, N, Mozzon, L, Blair, R, Chuen, J, Ferrar, D, Garbowski, M, Hamilton, Mj, Holdaway, C, Muthu, S, Shakibaie, F, Vasudevan, Tm, Kroese, A, Slagsvold, Ce, Dahl, T, Johnsen, Hj, Lange, C, Myhre, Ho, Gniadek, J, Andziak, P, Elwertowski, M, Leszczynski, J, Malek, Ak, Mieszkowski, J, Noszczyk, W, Szostek, M, Toutounchi, S, Correia, C, Pereira, Mc, Akchurin, Rs, Flis, V, Miksic, K, Stirn, B, Tetickovic, E, Cairols, M, Capdevila, Jm, Iborra Ortega, E, Obach, V, Riambau, V, Vidal Barraquer, F, Vila Coll, R, Diaz Vidal, E, Iglesias Negreia JI, Tovar Pardo, A, Iglesias, Rj, Alfageme, Af, Barba Velez, A, Estallo Laliena, L, Garcia Monco JC, Gonzalez, Lr, Corominas, C, Julia, J, Lozano, P, Marti Masso JF, Porta, Rm, Carrera, Ar, Gomez, J, Blomstrand, C, Gelin, J, Holm, J, Karlström, L, Mattsson, E, Bornhov, S, Dahlstrom, J, De Pedis, G, Jensen, Sm, Pärsson, H, Plate, G, Qvarfordt, P, Arvidsson, B, Brattström, L, Forssell, C, Potemkowski, A, Skiöldebrand, C, Stoor, P, Blomqvist, M, Calander, M, Lundgren, F, Almqvist, H, Norgren, L, Norrving, B, Ribbe, E, Thörne, J, Gottsäter, A, Mätzsch, T, Nilsson, Me, Lonsson, M, Stahre, B, Stenberg, B, Konrad, P, Jarl, L, Lundqvist, L, Olofsson, P, Rosfors, S, Swedenborg, J, Takolander, R, Bergqvist, D, Ljungman, C, Kniemeyer, Hw, Widmer, Mk, Kuster, R, Kaiser, R, Nagel, W, Sege, D, Weder, B, De Nie, J, Doelman, J, Yilmaz, N, Buth, J, Stultiens, G, Boiten, J, Boon, A, van der Linden, F, Busman, Dc, Sinnige, Ha, Yo, Ti, de Borst GJ, Eikelboom, Bc, Kappelle, Lj, Moll, F, Dortland, Rw, Westra, Te, Jaber, H, Manaa, J, Meftah, Rb, Nabil, Br, Sraieb, T, Bateman, D, Budd, J, Horrocks, M, Kivela, M, Shaw, L, Walker, R, D'Sa, Aa, Fullerton, K, Hannon, R, Hood, Jm, Lee, B, Mcguigan, K, Morrow, J, Reid, J, Soong, Cv, Simms, M, Baird, R, Campbell, M, Cole, S, Ferguson, It, Lamont, P, Mitchell, D, Sassano, A, Smith, Fc, Blake, K, Kirkpatrick, Pj, Martin, P, Turner, C, Clegg, Jf, Crosley, M, Hall, J, De Cossart, L, Edwards, P, Fletcher, D, Rosser, S, Mccollum, Pt, Davidson, D, Levison, R, Bradbury, Aw, Chalmers, Rt, Dennis, M, Murie, J, Ruckley, Cv, Sandercock, P, Campbell, Wb, Frankel, T, Gardner Thorpe, C, Gutowski, N, Hardie, R, Honan, W, Niblett, P, Peters, A, Ridler, B, Thompson, Jf, Bone, I, Welch, G, Grocott, Ec, Overstall, P, Aldoori, Mi, Dafalla, Be, Bryce, J, Clarke, C, Ming, A, Wilkinson, Ar, Bamford, J, Berridge, D, Scott, J, Abbott, Rj, Naylor, R, Harris, P, Humphrey, P, Adiseshiah, M, Aukett, M, Baker, D, Bishop, Cc, Boutin, A, Brown, M, Burke, P, Burnand, Kg, Colchester, A, Coward, L, Davies, Ah, Espasandin, M, Giddings, Ae, Hamilton, G, Judge, C, Kakkos, S, Mcguiness, C, Morris Vincent, P, Nicolaides, A, Padayachee, Ts, Riordan, H, Sullivan, E, Taylor, P, Thompson, M, Wolfe, Jh, Mccollum, Cn, O'Neill, Pa, Welsh, S, Barnes, J, Cleland, P, Davis, M, Gholkar, A, Jones, R, Jaykishnam, V, Mendelow, Ad, O'Connell, Je, Siddique, Ms, Stansby, G, Vivar, R, Ashley, S, Cosgrove, C, Gibson, J, Wilkins, Dc, Chant, Ad, Frankel, J, Shearman, Cp, Williams, J, Hall, G, Holdsworth, R, Davies, Jn, Mclean, B, Woodburn, Kr, Brown, G, Curley, P, Loizou, L, Chaturvedi, S, Diaz, F, Radak, D, Todorovic, Pr, Kamugasha, D, Baxter, A, Berry, C, Burrett, J, Collins, R, Crowther, J, Davies, C, Farrell, B, Godwin, J, Gray, R, Harwood, C, Hirt, L, Hope, C, Knight, S, Lay, M, Munday, A, Murawska, A, Peto, Cg, Radley, A, Richards, S., Cras, Patrick, van Schil, Paul, et al., Asymptomatic Carotid Surgery Trial (ACST) Collaborative Group, Halliday, A, Harrison, M, Hayter, E, Kong, X, Mansfield, A, Marro, J, Pan, H, Peto, R, Potter, J, Rahimi, K, Rau, A, Robertson, S, Streifler, J, Thomas, D, Adovasio, Roberto, and Asymptomatic Carotid Surgery Trial Collaborative, Group
- Subjects
Male ,Time Factors ,medicine.medical_treatment ,Kaplan-Meier Estimate ,Carotid endarterectomy ,Aged ,80 and over ,Carotid Stenosis ,Endarterectomy ,Carotid ,Female ,Humans ,Incidence ,Middle Aged ,Primary Prevention ,Stroke ,Treatment Outcome ,Stroke/epidemiology ,law.invention ,Randomized controlled trial ,law ,Aged, 80 and over ,Endarterectomy, Carotid ,endarterectomy ,Carotid Stenosis/mortality ,Incidence (epidemiology) ,Carotid*/mortality ,General Medicine ,Carotid Stenosis | Internal Carotid Artery | Endarterectomy ,medicine.symptom ,medicine.medical_specialty ,Asymptomatic ,Internal medicine ,asymptomatic carotid artery stenosi ,medicine ,asymptomatic carotid artery stenosis ,business.industry ,Carotid Stenosis/complications ,Stroke/prevention & control ,Perioperative ,medicine.disease ,Surgery ,Stenosis ,Human medicine ,business - Abstract
SummaryBackgroundIf carotid artery narrowing remains asymptomatic (ie, has caused no recent stroke or other neurological symptoms), successful carotid endarterectomy (CEA) reduces stroke incidence for some years. We assessed the long-term effects of successful CEA.MethodsBetween 1993 and 2003, 3120 asymptomatic patients from 126 centres in 30 countries were allocated equally, by blinded minimised randomisation, to immediate CEA (median delay 1 month, IQR 0·3–2·5) or to indefinite deferral of any carotid procedure, and were followed up until death or for a median among survivors of 9 years (IQR 6–11). The primary outcomes were perioperative mortality and morbidity (death or stroke within 30 days) and non-perioperative stroke. Kaplan-Meier percentages and logrank p values are from intention-to-treat analyses. This study is registered, number ISRCTN26156392.Findings1560 patients were allocated immediate CEA versus 1560 allocated deferral of any carotid procedure. The proportions operated on while still asymptomatic were 89·7% versus 4·8% at 1 year (and 92·1% vs 16·5% at 5 years). Perioperative risk of stroke or death within 30 days was 3·0% (95% CI 2·4–3·9; 26 non-disabling strokes plus 34 disabling or fatal perioperative events in 1979 CEAs). Excluding perioperative events and non-stroke mortality, stroke risks (immediate vs deferred CEA) were 4·1% versus 10·0% at 5 years (gain 5·9%, 95% CI 4·0–7·8) and 10·8% versus 16·9% at 10 years (gain 6·1%, 2·7–9·4); ratio of stroke incidence rates 0·54, 95% CI 0·43–0·68, p
- Published
- 2010
- Full Text
- View/download PDF
29. Repression of violations.
- Author
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THOMPSON, JF
- Published
- 1980
30. First interim analysis of a randomised trial of whole brain radiotherapy in melanoma brain metastases confirms high data quality.
- Author
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Fogarty, GB, Hong, A, Dolven-Jacobsen, K, Reisse, CH, Burmeister, B, Haydu, LH, Dhillon, H, Steel, V, Shivalingam, B, Drummond, K, Vardy, J, Nowak, A, Hruby, G, Scolyer, RA, Mandel, C, Thompson, JF, Fogarty, GB, Hong, A, Dolven-Jacobsen, K, Reisse, CH, Burmeister, B, Haydu, LH, Dhillon, H, Steel, V, Shivalingam, B, Drummond, K, Vardy, J, Nowak, A, Hruby, G, Scolyer, RA, Mandel, C, and Thompson, JF
- Abstract
BACKGROUND: Brain metastases are a common cause of death in patients with melanoma. The role of adjuvant whole brain radiotherapy (WBRT) following local treatment of intracranial melanoma metastases is controversial. The Australian and New Zealand Melanoma Trials Group (ANZMTG) and the Trans-Tasman Radiation Oncology Group (TROG) are leading the first ever single histology randomised trial investigating this question. The primary endpoint is distant intracranial failure on magnetic resonance imaging (MRI) within twelve months of randomisation. The first planned interim analysis was performed twelve months after randomisation of the 100(th) patient. The analysis was an opportunity to review completeness of the trial data to date. METHODS: All data received up to the end of twelve months after randomisation of the 100th patient was reviewed. RESULTS: Review of pathology reports confirmed that all 100 patients had stage IV melanoma and were appropriately entered into the study. Of the 47 distant intracranial events, 34 occurred in isolation (i.e. only distant failure was identified), whilst 13 were accompanied by local failure. Data review showed compliance with the protocol mandated MRI schedule and accuracy of intracranial failure reporting was very high. The Quality of Life (QoL) component of the study achieved a 91% completion rate. For the neurocognitive function (NCF) assessments, a high completion rate was maintained throughout the 12 month period. Where assessments were not performed at expected time points, valid reasons were noted. Radiotherapy quality was high. Of 50 patients who received WBRT, 32 were reviewed as per protocol design and there was only one major variation out of 308 data points reviewed (0.3%). There were minimal trial related adverse events (AEs) and no serious adverse events (SAEs). Pre-specified protocol stopping rules were not met. CONCLUSIONS: The Data Safety Monitoring Committee (DSMC) recommended the trial continue recruitment after r
- Published
- 2015
31. Using decision analysis to model cancer surveillance
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van Kessel, Kim, Geurts, SME, Verbeek, ALM, Steyerberg, Ewout, Johnson, FE, Maehara, Y, Browman, GP, Margenthaler, JA, Audiso, RA, Thompson, JF, Johnson, DY, Earle, CC, Virgo, K, and Public Health
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SDG 3 - Good Health and Well-being - Published
- 2013
32. Local and Intralesional Therapy of In-Transit Melanoma Metastases
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Testori, A, Faries, MB, Thompson, JF, Pennacchioli, E, Deroose, Jan, Geel, AN, Verhoef, Kees, Verrecchia, F, Soteldo, J, and Surgery
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fungi - Abstract
Regional relapse of melanoma may occur as satellite or in-transit metastases proximal to the primary tumor in the direction of the lymph flow. The management of in-transit metastases is challenging because the efficacy of treatment is largely dictated by the biological behavior of the patient's melanoma. This review examines local treatment modalities. J. Surg. Oncol. 2011;104:391-396. (C) 2011 Wiley-Liss, Inc.
- Published
- 2011
33. Treatment of Melanoma Metastases in a Limb by Isolated Limb Perfusion and Isolated Limb Infusion
- Author
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Testori, A, Verhoef, Kees, Kroon, HM, Pennacchioli, E, Faries, MB, Eggermont, Lex, Thompson, JF, and Surgery
- Subjects
body regions ,fungi - Abstract
In-transit melanoma metastases are often confined to a limb. In this circumstance, treatment by isolated limb perfusion or isolated limb infusion can be a remarkably effective regional treatment option. J. Surg. Oncol. 2011;104:397-404. (C) 2011 Wiley-Liss, Inc.
- Published
- 2011
34. TRIM16 inhibits proliferation and migration through regulation of interferon beta 1 in melanoma cells
- Author
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Sutton, SK, Koach, J, Tan, O, Liu, B, Carter, DR, Wilmott, JS, Yosufi, B, Haydu, LE, Mann, GJ, Thompson, JF, Long, GV, Liu, T, McArthur, G, Zhang, XD, Scolyer, RA, Cheung, BB, Marshall, GM, Sutton, SK, Koach, J, Tan, O, Liu, B, Carter, DR, Wilmott, JS, Yosufi, B, Haydu, LE, Mann, GJ, Thompson, JF, Long, GV, Liu, T, McArthur, G, Zhang, XD, Scolyer, RA, Cheung, BB, and Marshall, GM
- Abstract
High basal or induced expression of the tripartite motif protein, TRIM16, leads to reduce cell growth and migration of neuroblastoma and skin squamous cell carcinoma cells. However, the role of TRIM16 in melanoma is currently unknown. TRIM16 protein levels were markedly reduced in human melanoma cell lines, compared with normal human epidermal melanocytes due to both DNA methylation and reduced protein stability. TRIM16 knockdown strongly increased cell migration in normal human epidermal melanocytes, while TRIM16 overexpression reduced cell migration and proliferation of melanoma cells in an interferon beta 1 (IFNβ1)-dependent manner. Chromatin immunoprecipitation assays revealed TRIM16 directly bound the IFNβ1 gene promoter. Low level TRIM16 expression in 91 melanoma patient samples, strongly correlated with lymph node metastasis, and, predicted poor patient prognosis in a separate cohort of 170 melanoma patients with lymph node metastasis. The BRAF inhibitor, vemurafenib, increased TRIM16 protein levels in melanoma cells in vitro, and induced growth arrest in BRAF-mutant melanoma cells in a TRIM16-dependent manner. High levels of TRIM16 in melanoma tissues from patients treated with Vemurafenib correlated with clinical response. Our data, for the first time, demonstrates TRIM16 is a marker of cell migration and metastasis, and a novel treatment target in melanoma.
- Published
- 2014
35. Correlation of BRAF and NRAS mutation status with outcome, site of distant metastasis and response to chemotherapy in metastatic melanoma
- Author
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Carlino, MS, Haydu, LE, Kakavand, H, Menzies, AM, Hamilton, AL, Yu, B, Ng, CC, Cooper, WA, Thompson, JF, Kefford, RF, O'Toole, SA, Scolyer, RA, Long, GV, Carlino, MS, Haydu, LE, Kakavand, H, Menzies, AM, Hamilton, AL, Yu, B, Ng, CC, Cooper, WA, Thompson, JF, Kefford, RF, O'Toole, SA, Scolyer, RA, and Long, GV
- Abstract
BACKGROUND: The prognostic significance of BRAF and NRAS mutations in metastatic melanoma patients remains uncertain, with several studies reporting conflicting results, often biased by the inclusion of patients treated with BRAF and MEK (MAPK) inhibitors. We therefore interrogated a historical cohort of patients free of the confounding influence of MAPK inhibitor therapy. METHODS: Patients with available archival tissue first diagnosed with metastatic melanoma between 2002 and 2006 were analysed. Mutational analysis was performed using the OncoCarta Panel. Patient characteristics, treatment outcome and survival were correlated with BRAF/NRAS mutation status. RESULTS: In 193 patients, 92 (48%) melanomas were BRAF-mutant, 39 (20%) were NRAS-mutant and 62 (32%) were wild-type for BRAF/NRAS mutations (wt). There was no difference in response to chemotherapy based on mutation status (35-37%). The distant disease-free interval (DDFI) was significantly shorter in patients with wt melanoma (27.9 months vs 35.1 for BRAF and 49.1 for NRAS) although this was not significant in multivariate analysis. Survival from stage IV melanoma diagnosis was not significantly different based on mutation status. The DDFI was significantly shorter in patients with BRAF(V600K/R) versus BRAF(V600E) melanoma in univariate and multivariate analyses. CONCLUSIONS: BRAF and NRAS mutation status does not influence survival in metastatic melanoma.
- Published
- 2014
36. A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
- Author
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Su, Z, Labaj, PP, Li, S, Thierry-Mieg, J, Thierry-Mieg, D, Shi, W, Wang, C, Schroth, GP, Setterquist, RA, Thompson, JF, Jones, WD, Xiao, W, Xu, W, Jensen, RV, Kelly, R, Xu, J, Conesa, A, Furlanello, C, Gao, H, Hong, H, Jafari, N, Letovsky, S, Liao, Y, Lu, F, Oakeley, EJ, Peng, Z, Praul, CA, Santoyo-Lopez, J, Scherer, A, Shi, T, Smyth, GK, Staedtler, F, Sykacek, P, Tan, X-X, Thompson, EA, Vandesompele, J, Wang, MD, Wang, J, Wolfinger, RD, Zavadil, J, Auerbach, SS, Bao, W, Binder, H, Blomquist, T, Brilliant, MH, Bushel, PR, Cain, W, Catalano, JG, Chang, C-W, Chen, T, Chen, G, Chen, R, Chierici, M, Chu, T-M, Clevert, D-A, Deng, Y, Derti, A, Devanarayan, V, Dong, Z, Dopazo, J, Du, T, Fang, H, Fang, Y, Fasold, M, Fernandez, A, Fischer, M, Furio-Tari, P, Fuscoe, JC, Caiment, F, Gaj, S, Gandara, J, Ge, W, Gondo, Y, Gong, B, Gong, M, Gong, Z, Green, B, Guo, C, Guo, L, Guo, L-W, Hadfield, J, Hellemans, J, Hochreiter, S, Jia, M, Jian, M, Johnson, CD, Kay, S, Kleinjans, J, Lababidi, S, Levy, S, Li, Q-Z, Li, L, Li, P, Li, Y, Li, H, Li, J, Lin, SM, Lopez, FJ, Lu, X, Luo, H, Ma, X, Meehan, J, Megherbi, DB, Mei, N, Mu, B, Ning, B, Pandey, A, Perez-Florido, J, Perkins, RG, Peters, R, Phan, JH, Pirooznia, M, Qian, F, Qing, T, Rainbow, L, Rocca-Serra, P, Sambourg, L, Sansone, S-A, Schwartz, S, Shah, R, Shen, J, Smith, TM, Stegle, O, Stralis-Pavese, N, Stupka, E, Suzuki, Y, Szkotnicki, LT, Tinning, M, Tu, B, van Deft, J, Vela-Boza, A, Venturini, E, Walker, SJ, Wan, L, Wang, W, Wieben, ED, Willey, JC, Wu, P-Y, Xuan, J, Yang, Y, Ye, Z, Yin, Y, Yu, Y, Yuan, Y-C, Zhang, J, Zhang, KK, Zhang, W, Zhang, Y, Zhao, C, Zheng, Y, Zhou, Y, Zumbo, P, Tong, W, Kreil, DP, Mason, CE, Shi, L, Su, Z, Labaj, PP, Li, S, Thierry-Mieg, J, Thierry-Mieg, D, Shi, W, Wang, C, Schroth, GP, Setterquist, RA, Thompson, JF, Jones, WD, Xiao, W, Xu, W, Jensen, RV, Kelly, R, Xu, J, Conesa, A, Furlanello, C, Gao, H, Hong, H, Jafari, N, Letovsky, S, Liao, Y, Lu, F, Oakeley, EJ, Peng, Z, Praul, CA, Santoyo-Lopez, J, Scherer, A, Shi, T, Smyth, GK, Staedtler, F, Sykacek, P, Tan, X-X, Thompson, EA, Vandesompele, J, Wang, MD, Wang, J, Wolfinger, RD, Zavadil, J, Auerbach, SS, Bao, W, Binder, H, Blomquist, T, Brilliant, MH, Bushel, PR, Cain, W, Catalano, JG, Chang, C-W, Chen, T, Chen, G, Chen, R, Chierici, M, Chu, T-M, Clevert, D-A, Deng, Y, Derti, A, Devanarayan, V, Dong, Z, Dopazo, J, Du, T, Fang, H, Fang, Y, Fasold, M, Fernandez, A, Fischer, M, Furio-Tari, P, Fuscoe, JC, Caiment, F, Gaj, S, Gandara, J, Ge, W, Gondo, Y, Gong, B, Gong, M, Gong, Z, Green, B, Guo, C, Guo, L, Guo, L-W, Hadfield, J, Hellemans, J, Hochreiter, S, Jia, M, Jian, M, Johnson, CD, Kay, S, Kleinjans, J, Lababidi, S, Levy, S, Li, Q-Z, Li, L, Li, P, Li, Y, Li, H, Li, J, Lin, SM, Lopez, FJ, Lu, X, Luo, H, Ma, X, Meehan, J, Megherbi, DB, Mei, N, Mu, B, Ning, B, Pandey, A, Perez-Florido, J, Perkins, RG, Peters, R, Phan, JH, Pirooznia, M, Qian, F, Qing, T, Rainbow, L, Rocca-Serra, P, Sambourg, L, Sansone, S-A, Schwartz, S, Shah, R, Shen, J, Smith, TM, Stegle, O, Stralis-Pavese, N, Stupka, E, Suzuki, Y, Szkotnicki, LT, Tinning, M, Tu, B, van Deft, J, Vela-Boza, A, Venturini, E, Walker, SJ, Wan, L, Wang, W, Wieben, ED, Willey, JC, Wu, P-Y, Xuan, J, Yang, Y, Ye, Z, Yin, Y, Yu, Y, Yuan, Y-C, Zhang, J, Zhang, KK, Zhang, W, Zhang, Y, Zhao, C, Zheng, Y, Zhou, Y, Zumbo, P, Tong, W, Kreil, DP, Mason, CE, and Shi, L
- Abstract
We present primary results from the Sequencing Quality Control (SEQC) project, coordinated by the US Food and Drug Administration. Examining Illumina HiSeq, Life Technologies SOLiD and Roche 454 platforms at multiple laboratory sites using reference RNA samples with built-in controls, we assess RNA sequencing (RNA-seq) performance for junction discovery and differential expression profiling and compare it to microarray and quantitative PCR (qPCR) data using complementary metrics. At all sequencing depths, we discover unannotated exon-exon junctions, with >80% validated by qPCR. We find that measurements of relative expression are accurate and reproducible across sites and platforms if specific filters are used. In contrast, RNA-seq and microarrays do not provide accurate absolute measurements, and gene-specific biases are observed for all examined platforms, including qPCR. Measurement performance depends on the platform and data analysis pipeline, and variation is large for transcript-level profiling. The complete SEQC data sets, comprising >100 billion reads (10Tb), provide unique resources for evaluating RNA-seq analyses for clinical and regulatory settings.
- Published
- 2014
37. Malignant melanoma: introduction
- Author
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Vries, Esther, Bray, FI, Coeberg, JW, Cerroni, L, Ruiter, DJ, Elder, DE, Thompson, JF, Barnhill, RL, van Muijen, GNP, Scolyer, RA, LeBoit, PE, LeBoit, P.E., Burg, G., Weedon, D., Sarasin, A., and Public Health
- Published
- 2006
38. Low risk of in-transit metastasis in patients with cutaneous melanoma undergoing sentinal lymph node biopsy
- Author
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Pawlik, TM, Ross, MI, Thompson, JF, Eggermont, Lex, Gershenwald, JE, and Surgery
- Published
- 2005
39. Antimony concentrations in nodal tissue can confirm sentinel node identity
- Author
-
Scolyer, RA, Thompson, JF, Li, LXL, Beavis, A, Dawson, M, Doble, P, Soper, R, Uren, RF, Stretch, JR, Sharma, R, and McCarthy, SW
- Subjects
Antimony ,Skin Neoplasms ,Sentinel Lymph Node Biopsy ,Predictive Value of Tests ,Lymphatic Metastasis ,Pathology ,Humans ,Reproducibility of Results ,Radionuclide Imaging ,Melanoma - Abstract
The sentinel node biopsy procedure is a highly accurate method of staging patients with cutaneous melanoma and the tumor-harboring status of sentinel nodes is the most important prognostic factor. For the procedure to provide accurate prognostic information, however, it is essential that 'true' sentinel nodes are removed and examined thoroughly. A technique to confirm sentinel node identity may reduce the false-negative rate of the procedure. We have found that antimony (originating from the antimony sulfide colloid used for preoperative lymphoscintigraphy in our institution) can be measured in tissue sections of sentinel nodes using inductively coupled plasma mass spectrometry. The aims of this study were to determine whether antimony concentrations can be used to confirm that removed sentinel nodes are 'true' sentinel nodes and to differentiate sentinel nodes from nonsentinel nodes. In all, 24 patients who had both a tumor-positive sentinel node and a tumor-negative nonsentinel node removed from one regional node field during the same operation, were identified. Tissue sections (50 μm) thick were cut from archival paraffin blocks of each of the sentinel nodes and nonsentinel nodes. Antimony concentrations in the tissue sections were measured using inductively coupled plasma mass spectrometry. The median and mean concentrations of antimony in parts per billion were 0.526 and 1.198, respectively (range 0.020-7.596) in the sentinel nodes, and 0.043 and 0.123 (range 0-0.800) in the nonsentinel nodes (P = 0.004). In four of the 24 pairs, both the presumed sentinel nodes and the nonsentinel nodes had very low antimony levels (less than 0.18 parts per billion), suggesting that nodes designated as sentinel nodes may not have been 'true' sentinel nodes. It is concluded that determination of antimony concentrations within sentinel nodes using the highly sensitive method of inductively coupled plasma mass spectrometry can confirm the identity of sentinel nodes and validate the sentinel node technique.
- Published
- 2004
40. Isolated limb infusion for melanoma
- Author
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Thompson, JF, Kam, PCA, Wilt, JHW, Linder, P, Thompson, J, Morton, DL, Kroon, BBR, and Surgery
- Published
- 2004
41. Prognosis for patients with thin cutaneous melanoma: long-term survival data from New South Wales Central Cancer Registry and the Sydney Melanoma Unit
- Author
-
McKinnon JG, Yu XQ, McCarthy WH, and Thompson JF
- Subjects
Male ,Adult ,Canada ,Skin Neoplasms ,Adolescent ,diagnosis ,analysis ,survival ,methods ,surgery ,Humans ,cancer ,cancer registry ,Registries ,Melanoma ,Aged ,Research Support,Non-U.S.Gov't ,Wales ,Australia ,Middle Aged ,Prognosis ,mortality ,Cancer Control, Survivorship, and Outcomes Research - Resources and Infrastructure ,Cancer Type - Skin Cancer ,Survival Rate ,Aged,80 and over ,epidemiology ,Female ,pathology ,New South Wales - Abstract
BACKGROUND: Estimates of long-term survival for patients with thin (< or = 1 mm) primary cutaneous melanomas vary widely. Two separate methods were used to study the survival of patients with melanoma from New South Wales (NSW), Australia, and from the Sydney Melanoma Unit (SMU). METHODS: The NSW Central Cancer Registry (NSWCCR) provided data on all patients who were diagnosed with cutaneous melanomas that measured < or = 1 mm thick between 1983 and 1998, inclusive. Patients with metastases at the time of diagnosis were not included, leaving 18,088 patients for analysis. The SMU data base was analyzed to extract data for all patients with thin melanomas who met the same criteria from 1979 to 1998, inclusive. All patients who had their primary tumors treated definitively elsewhere were excluded, leaving 2746 patients for analysis. Ten-year Kaplan-Meier survival rates were calculated, and significant differences were determined using log-rank analysis. Prognostic factors were evaluated with Cox proportional hazards analysis. RESULTS: The NSWCCR analysis revealed a 10-year survival rate of 96.4%. The 10-year survival rate for patients at SMU was 92.7%. Among the patients at SMU who died, the median time to recurrence was 49.8 months, and the median time to death was 65.9 months. The 10-year survival for patients at SMU who had lesions that measured < or = 0.75 mm was 96.9% compared with 84.3% for patients who had lesions that measured 0.76-1.0 mm. For patients who had ulcerated melanomas measuring < or = 1 mm thick, the 10-year survival rate was 83%, compared with 92.3% for patients who had nonulcerated melanomas. CONCLUSIONS: The results of the current study confirmed the excellent survival rate for patients with thin melanomas. Higher-risk subsets of patients who may warrant consideration for aggressive investigation and treatment are identifiable
- Published
- 2003
42. Liver and biliary tract carcinoma surveillance counterpoint: Europe
- Author
-
Johnson, F, Maehara, Y, Browman, GP, Margenthaler, JA, Audisio, RA, Thompson, JF, Johnson, DY, Earle, CC, Virgo, KS, Colledan, M, Johnson, F, Maehara, Y, Browman, GP, Margenthaler, JA, Audisio, RA, Thompson, JF, Johnson, DY, Earle, CC, Virgo, KS, and Colledan, M
- Abstract
Little or no evidence exists on which criteria for follow-up for postsurgical treatment of hepatobiliary cancer may be based. Therefore, although these cancers are common, current guidelines seldom address this issue and only with generic recommendations. In addition to what was reported in the main chapter, the only guidelines generated in Europe and written in English on the treatment of hepatic and biliary tumors are those published by the British Society of Gastroenterology [1, 2]. However, these report no recommendation about posttreatment surveillance. On the other hand, the Associazione Italiana Studio Fegato (AISF—Italian Association for the Study of the Liver) has published guidelines written in Italian on the management of patients with hepatocellular carcinoma (HCC) which include some recommendations about surveillance [3–5]. These recommendations, currently followed by most Italian institutions, including ours, are summarized here.
- Published
- 2013
43. Isolated limb perfusion in the management of patients with recurrent limb melanoma: an important but limited role
- Author
-
Thompson, JF, Wilt, JHW, and Surgery
- Published
- 2001
44. Optimizing the frequency of follow-up visits for patients treated for localized primary cutaneous melanoma
- Author
-
Turner, RM, Bell, KJL, Morton, RL, Hayen, A, Francken, AB, Howard, K, Armstrong, B, Thompson, JF, Irwig, L, Turner, RM, Bell, KJL, Morton, RL, Hayen, A, Francken, AB, Howard, K, Armstrong, B, Thompson, JF, and Irwig, L
- Abstract
Purpose: To develop more evidence-based guidelines for the frequency of patient follow-up after treatment of localized (American Joint Committee on Cancer [AJCC] stage I or II) melanoma. Methods: We used data from Melanoma Institute Australia on an inception cohort of 3,081 consecutive patients first diagnosed with stage I or II melanoma between January 1985 and December 2009. Kaplan-Meier curves and Cox models were used to characterize the time course and predictors for recurrence and new primaries. We modeled the delay in diagnosis of recurrence or new primary as well as the number of monitoring visits required using two monitoring schedules: first, according to 2008 Australian and New Zealand guidelines and, second, with fewer visits, especially for those at lowest risk of recurrence. Results: For every 1,000 patients beginning follow-up, 229 developed recurrence and 61 developed new primary within 10 years. There was only a small difference in modeled delay in diagnosis (extra 44.9 and 9.6 patients per 1,000 for recurrence and new primary, respectively, with delay greater than 2 months) using a schedule that requires far fewer visits (3,000 fewer visits per 1,000 patients) than recommended by current guidelines. AJCC substage was the most important predictor of recurrence, whereas age and date of primary diagnosis were important predictors of developing new primary. Conclusion: By providing less intensive monitoring, more efficient follow-up strategies are possible. Fewer visits with a more focused approach may address the needs of patients and clinicians to detect recurrent or new melanoma. © 2011 by American Society of Clinical Oncology.
- Published
- 2011
45. Elemental bio-imaging of melanoma in lymph node biopsies
- Author
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Hare, D, Burger, F, Austin, C, Fryer, F, Grimm, R, Reedy, B, Scolyer, RA, Thompson, JF, Doble, P, Hare, D, Burger, F, Austin, C, Fryer, F, Grimm, R, Reedy, B, Scolyer, RA, Thompson, JF, and Doble, P
- Abstract
The spatial distribution of trace elements in human lymph nodes partially infiltrated by melanoma cells was determined by elemental bio-imaging. Imaging of 31P within the nodal capsule and normal lymph node tissue showed a clear demarcation of the tumour boundary, with a significant decrease in relative 31P concentration within the tumour. The location of the tumour boundary was confirmed by haematoxylin and eosin staining of serial sections and observation by light microscopy. Further enhancement of the tumour boundary was achieved by imaging the 31P/34S ratio. 31P/66Zn ratio images showed a decreasing ratio beyond the tumour boundary that extended into peritumour normal lymph node tissue. © The Royal Society of Chemistry.
- Published
- 2009
46. Confirmation of sentinel lymph node identity by analysis of fine-needle biopsy samples using inductively coupled plasma-mass spectrometry
- Author
-
Beavis, A, Dawson, M, Doble, P, Scolyer, RA, Bourne, R, Li, LXL, Murali, R, Stretch, JR, Lean, CL, Uren, RF, Thompson, JF, Beavis, A, Dawson, M, Doble, P, Scolyer, RA, Bourne, R, Li, LXL, Murali, R, Stretch, JR, Lean, CL, Uren, RF, and Thompson, JF
- Abstract
Background: The sentinel lymph node (SLN) biopsy technique is a reliable means of determining the tumor-harboring status of regional lymph nodes in melanoma patients. When technetium 99 m-labeled antimony trisulfide colloid (99 mTc-Sb2S3) particles are used to perform preoperative lymphoscintigraphy for SLN identification, they are retained in the SLN but are absent or present in only tiny amounts in non-SLNs. The present study investigated the potential for a novel means of assessing the accuracy of surgical identification of SLNs. This involved the use of inductively coupled plasma-mass spectrometry (ICP-MS) to analyze antimony concentrations in fine-needle biopsy (FNB) samples from surgically procured lymph nodes. Methods: A total of 47 FNB samples from surgically excised lymph nodes (32 SLNs and 15 non-SLNs) were collected. The SLNs were localized by preoperative lymphoscintigraphy that used 99 mTc-Sb2S3, blue dye, and gamma probe techniques. The concentrations of antimony were measured in the FNB samples by ICP-MS. Results: The mean and median antimony concentrations (in parts per billion) were .898 and .451 in the SLNs, and .015 and .068 in the non-SLNs, the differences being highly statistically significant (P < .00005). Conclusions: Our results show that ICP-MS analysis of antimony concentrations in FNB specimens from lymph nodes can accurately confirm the identity of SLNs. Used in conjunction with techniques such as proton magnetic resonance spectroscopy for the nonsurgical evaluation of SLNs, ICP-MS analysis of antimony concentrations in FNB samples could potentially serve as a minimally invasive alternative to surgery and histopathologic evaluation to objectively classify a given node as sentinel or nonsentinel and determine its tumor-harboring status. © 2007 The Author(s).
- Published
- 2008
47. False negative sentinel lymph node biopsies in melanoma may result from deficiencies in nuclear medicine, surgery, or pathology
- Author
-
Karim, RZ, Scolyer, RA, Li, W, Yee, VSK, McKinnon, JG, Li, LXL, Uren, RF, Lam, S, Beavis, A, Dawson, M, Doble, P, Hoon, DSB, Thompson, JF, Karim, RZ, Scolyer, RA, Li, W, Yee, VSK, McKinnon, JG, Li, LXL, Uren, RF, Lam, S, Beavis, A, Dawson, M, Doble, P, Hoon, DSB, and Thompson, JF
- Abstract
OBJECTIVE: To investigate a cohort of melanoma patients with false negative (FN) sentinel node (SN) biopsies (SNBs) to identify the reasons for the FN result. SUMMARY OF BACKGROUND DATA: SNB is a highly efficient staging method in melanoma patients. However, with long-term follow-up FN SNB results of up to 25% have been reported. METHODS: Seventy-four SNs from 33 patients found to have had an FN SNB were analyzed by reviewing the lymphoscintigraphy, surgical data, and histopathology, and by assessing nodal tissue using multimarker real-time quantitative reverse transcription (qRT) polymerase chain reaction, and antimony concentration measurements (as a marker of "true" SN status) using inductively coupled plasma mass spectroscopy. RESULTS: Nine SNs (12%) from 9 patients (27%) had evidence of melanoma on histopathologic review. Twelve SNs (16%) from 10 patients (30%) were qRT(+). Four of these 12 SNs were positive on histopathology review and 8 were negative. Four patients (12%) were upstaged by qRT. Sixteen patients had their SNB histology, lymphoscintigraphy, and surgical data reviewed. Identifiable causes of the FN SNBs were not found after review of all modalities in 4 patients. SNs from all 4 patients had antimony levels indicative of an SN. Of the SNs evaluable by qRT, 1 was qRT(+) and 7 SNs from 2 patients were qRT(-). CONCLUSIONS: An FN SN can occur because of deficiencies in nuclear medicine, surgery, or pathology. qRT can detect "occult" metastatic melanoma in SNs that have been identified as negative by histopathology. © 2008 Lippincott Williams & Wilkins, Inc.
- Published
- 2008
48. Prophylactic isolated limb perfusion for localized, high-risk limb melanoma: results of a multicenter randomized phase III trial
- Author
-
Vaglini, M, Suciu, S, Kroon, BBR, Thompson, JF, Gohl, J, Eggermont, AMM, Di Filippo, F, Krementz, ET, Ruiter, D, Lejeune, FJ, Schraffordt Koops, H., and Surgery
- Subjects
LYMPH-NODE DISSECTION ,THICKNESS ,MELPHALAN ,MANAGEMENT ,REGIONAL ISOLATED PERFUSION ,Tumor pathology ,Tumor pathologie ,EFFICACY ,MM ,STAGE-I MELANOMA ,EXTREMITY PERFUSION ,MALIGNANT-MELANOMA - Abstract
Purpose: Patients with primary cutaneous melanoma greater than or equal to 1.5 mm in thickness are at high risk of having regional micrometastases at the time of initial surgical treatment. A phase III international study was designed to evaluate whether prophylactic isolated limb perfusion (ILP) could prevent regional recurrence and influence survival. Patients and Methods: A total of 832 assessable patients from 16 centers entered the study; 412 were randomized to wide excision (WE) only and 420 to WE plus ILP with melphalan and mild hyperthermia, Median age was 50 years, 68% of patients were female, 79% of melanomas were located on a lower limb, and 47% had a thickness greater than or equal to 3 mm. Results: Median follow-vp duration is 6.4 years. There was a trend for a longer disease-free interval (DFI) after ILP. The difference was significant for patients who did not undergo elective lymph node dissection (ELND), The impact of ILP was clearly on the occurrence - as first site of progression - of in transit metastases (ITM), which were reduced from 6.6% to 3,3%, and of regional lymph node (RLN) metastases, with a reduction from 16.7% to 12.6%, There was no benefit from lip in terms of time to distant metastasis or survival. Side effects were higher after ILP, but transient in most patients. There were two amputations for limb toxicity after ILP, Conclusion: prophylactic ILP with melphalan cannot be recommended as an adjunct to standard surgery in high-risk primary limb melanoma, J Clin Oncol 16:2906-2912. (C) 1998 by American Society of Clinical Oncology.
- Published
- 1998
49. Antimony by ICP-MS as a marker for sentinel lymph nodes in melanoma patients
- Author
-
Dawson, M, Doble, P, Beavis, A, Li, LXL, Soper, R, Scolyer, RA, Uren, RF, Thompson, JF, Dawson, M, Doble, P, Beavis, A, Li, LXL, Soper, R, Scolyer, RA, Uren, RF, and Thompson, JF
- Abstract
A sensitive, accurate and specific method for the analysis of antimony by ICP-MS is presented as a marker of the sentinel lymph node in melanoma patients.
- Published
- 2003
50. A Wii problem
- Author
-
Fysh, Thomas, primary and Thompson, JF, additional
- Published
- 2009
- Full Text
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