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Fire has long been recognized as a significant evolutionary factor for the genus Pinus (family Pinaceae). Many pine species have developed specific fire-adaptations, such as self-pruning, resprouting, and serotiny, to persist under various fire regimes. Fire-related traits, such as needle length, bark thickness, and plant height, also can affect the survival of pines in fire-prone environments. Investigating the climate conditions of pines and analyzing the variation in fire-adaptations and fire-related traits across pines can provide insights into the evolutionary process of the genus Pinus affected by fire. However, such studies are rare, particularly those focusing on the relationship among environmental conditions, fire-adaptations, and fire-related traits with a large number of pine species. In this study, we explored the variation in climate conditions and fire-related traits (including tree height, bark thickness, and leaf length) between fire-adapted and non-fire-adapted pines, as well as among three fire survival strategies (fire-tolerators, fire-embracers, fire avoiders). We also investigated the relationships between climatic conditions and fire-related traits/fire-adaptations (including resprouting, self-pruning, the grass stage, and serotiny) across the genus Pinus. Sixty-one out of 101 pine species were found to possess one or more fire adaptations and were classified as fire-adapted pines. We found that fire-adapted pines occupy warmer and more fire-prone habitats, and exhibit longer leaves, thicker bark, and taller habits than non-fire-adapted species. Our analysis did not indicate a significant difference between fire tolerators and embracers regarding traits and climate conditions, except that fire-tolerators have thicker bark and are more associated with wildfire-prone areas. Climate conditions appeared to significantly affect fire-related traits/fire-adaptations across the genus Pinus. These findings will facilitate our understanding the evolutionary process of fire adaptations/fire-related traits in the genus Pinus and will guide sustainable fire management in different pine forests.

ABSTRACT Soil microorganisms are the most active participants in terrestrial ecosystems, and have key roles in biogeochemical cycles and ecosystem functions. Despite the extensive research on soil pH as a key predictor of microbial community and composition, a limitation of these studies lies in determining whether bacterial and/or fungal communities are directly or indirectly influenced by pH. We conducted a controlled laboratory experiment to investigate the effects of soil pH amendment (+/- 1–2 units) with six levels on soil microbial communities in two contrasting Chinese agricultural soils (pH 8.43 in Dezhou, located in the North China Plain, Shandong vs pH 6.17 in Wuxi, located in the Taihu Lake region, Jiangsu, east China). Results showed that the fungal diversity and composition were related to soil pH, but the effects were much lower than the effects of soil pH on bacterial community in two soils. The diversity and composition of bacterial communities were more closely associated with soil pH in Wuxi soils compared to Dezhou soils. The alpha diversity of bacterial communities peaked near in situ pH levels in both soils, displaying a quadratic fitting pattern. Redundancy analysis and variation partition analysis indicated that soil pH affected bacterial community and composition by directly imposing a physiological constraint on soil bacteria and indirectly altering soil characteristics (e.g., nutrient availability). The study also examined complete curves of taxa relative abundances at the phylum and family levels in response to soil pH, with most relationships conforming to a quadratic fitting pattern, indicating soil pH is a reliable predictor. Furthermore, soil pH amendment affected the transformation of nitrogen and the abundances of functional genes involved in the nitrogen cycle, and methane production and consumption. Overall, results from this study would enhance our comprehension of how soil microorganisms in contrasting farmlands will respond to soil pH changes, and would contribute to more effective soil management and conservation strategies.IMPORTANCEThis study delves into the impact of soil pH on microbial communities, investigating whether pH directly or indirectly influences bacterial and fungal communities. The research involved two contrasting soils subjected to a 1–2 pH unit amendment. Results indicate bacterial community composition was shaped by soil pH through physiological constraints and nutrient limitations. We found that most taxa relative abundances at the phylum and family levels responded to pH with a quadratic fitting pattern, indicating that soil pH is a reliable predictor. Additionally, soil pH was found to significantly influence the predicted abundance of functional genes involved in the nitrogen cycle as well as in methane production and consumption processes. These insights can contribute to develop more effective soil management and conservation strategies.

Top grafting is an efficient and practical technique for the renewal and rejuvenation of citrus trees in old orchards. However, root death after top grafting restricts plant growth and canopy reconstruction. Thus, applications of rooting promotion substances before citrus top grafting may increase the amount and activity of roots, thereby enhancing top-grafted plant performance. To test this assumption, four rooting promotion substances, i.e., rooting promotion powder, biochar, organic fertilizer, and potassium fulvic acid, were applied before top grafting, and the effects on biometric and physiological parameters were analyzed after top grafting. The results showed that the application of all rooting promotion substances before top grafting has a positive effect on growth and mineral nutrient acquisition, as well as on foliar C and N assimilates and the activity of anti-oxidative enzymes of top-grafted plants. Rooting promotion powder and biochar had the best effect on top-grafted tree performance in the short term. In conclusion, pre-grafting root promotion reduced root damage, enhanced nutrient acquisition, and improved the physiological performance of top-grafted plants. Therefore, this approach can play a crucial role in accelerating canopy reconstruction in old citrus orchards and in improving citrus plant development.

Diversifying cultivation management, including different crop rotation patterns and soil amendment, are effective strategies for alleviating the obstacles of continuous cropping in peanut (Arachis hypogaea L.). However, the peanut yield enhancement effect and temporal changes in soil chemical properties and microbial activities in response to differential multi-year crop rotation patterns and soil amendment remain unclear. In the present study, a multi-year localization experiment with the consecutive application of five different cultivation managements (including rotation with different crops under the presence or absence of external quicklime as soil amendment) was conducted to investigate the dynamic changes in peanut nutrient uptake and yield status, soil chemical property, microbial community composition and function. Peanut continuous cropping led to a reduction in peanut yield, while green manure-peanut rotation and wheat-maize-peanut rotation increased peanut yield by 40.59 and 81.95%, respectively. A combination of quicklime application increased yield by a further 28.76 and 24.34%. Alterations in cultivation management also strongly affected the soil pH, nutrient content, and composition and function of the microbial community. The fungal community was more sensitive than the bacterial community to cultivation pattern shift. Variation in bacterial community was mainly attributed to soil organic carbon, pH and calcium content, while variation in fungal community was more closely related to soil phosphorus content. Wheat-maize-peanut rotation combined with quicklime application effectively modifies the soil acidification environment, improves the soil fertility, reshapes the composition of beneficial and harmful microbial communities, thereby improving soil health, promoting peanut development, and alleviating peanut continuous cropping obstacles. We concluded that wheat-maize-peanut rotation in combination with quicklime application was the effective practice to improve the soil fertility and change the composition of potentially beneficial and pathogenic microbial communities in the soil, which is strongly beneficial for building a healthy soil micro-ecology, promoting the growth and development of peanut, and reducing the harm caused by continuous cropping obstacles to peanut.

Abstract Background Pancreatic adenocarcinoma (PAAD) is an aggressive solid tumour characterised by few early symptoms, high mortality, and lack of effective treatment. Therefore, it is important to identify new potential therapeutic targets and prognostic biomarkers of PAAD. Methods The Cancer Genome Atlas and Genotype-Tissue Expression databases were used to identify the expression and prognostic model of protocadherin 1 (PCDH1). The prognostic performance of risk factors and diagnosis of patients with PAAD were evaluated by regression analysis, nomogram, and receiver operating characteristic curve. Paraffin sections were collected from patients for immunohistochemistry (IHC) analysis. The expression of PCDH1 in cells obtained from primary tumours or metastatic biopsies was identified using single-cell RNA sequencing (scRNA-seq). Real-time quantitative polymerase chain reaction (qPCR) and western blotting were used to verify PCDH1 expression levels and the inhibitory effects of the compounds. Results The RNA and protein levels of PCDH1 were significantly higher in PAAD cells than in normal pancreatic ductal cells, similar to those observed in tissue sections from patients with PAAD. Aberrant methylation of the CpG site cg19767205 and micro-RNA (miRNA) hsa-miR-124-1 may be important reasons for the high PCDH1 expression in PAAD. Up-regulated PCDH1 promotes pancreatic cancer cell metastasis. The RNA levels of PCDH1 were significantly down-regulated following flutamide treatment. Flutamide reduced the percentage of PCDH1 RNA level in PAAD cells Panc-0813 to

Ecosystems that experience elevated CO2 (eCO2) are crucial interfaces where intricate interactions between plants and microbes occur. This study addressed the impact of eCO2 and a N supply on faba bean (Vicia faba L.) growth and the soil microbial community in auto-controlled growth chambers. In doing so, two ambient CO2 concentrations (aCO2, daytime/nighttime = 410/460 ppm; eCO2, 550/610 ppm) and two N supplement levels (without a N supply—N0—and 100 mg N as urea per kg of soil—N100) were applied. The results indicated that eCO2 mitigated the inhibitory effects of a N deficiency on legume photosynthesis and affected the CO2 assimilation efficiency, in addition to causing reduced nodulation. While the N addition counteracted the reductions in the N concentrations across the faba beans’ aboveground and belowground plant tissues under eCO2, the CO2 concentrations did not significantly alter the soil NH4+-N or NO3−-N responses to a N supply. Notably, under both aCO2 and eCO2, a N supply significantly increased the relative abundance of Nitrososphaeraceae and Nitrosomonadaceae, while eCO2 specifically reduced the Rhizobiaceae abundance with no significant changes under aCO2. A redundancy analysis (RDA) highlighted that the soil pH (p < 0.01) had the most important influence on the soil microbial community. Co-occurrence networks indicated that the eCO2 conditions mitigated the impact of a N supply on the reduced structural complexity of the soil microbial communities. These findings suggest that a combination of eCO2 and a N supply to crops can provide potential benefits for managing future climate change impacts on crop production.

Elevated CO2 levels (eCO2) pose challenges to wheat (Triticum aestivum L.) growth, potentially leading to a decline in quality and productivity. This study addresses the effects of two ambient CO2 concentrations (aCO2, daytime/nighttime = 410/450 ± 30 ppm and eCO2, 550/600 ± 30 ppm) and two nitrogen (N) supplements (without N supply—N0 and with 100 mg N supply as urea per kg soil—N100) on wheat (T. aestivum cv. Yunmai) growth, N accumulation, and soil microbial communities related to ammonia oxidization. The data showed that the N supply effectively mitigated the negative impacts of eCO2 on wheat growth by reducing intercellular CO2 concentrations while enhancing photosynthesis parameters. Notably, the N supply significantly increased N concentrations in wheat tissues and biomass production, thereby boosting N accumulation in seeds, shoots, and roots. eCO2 increased the agronomic efficiency of applied N (AEN) and the physiological efficiency of applied N (PEN) under N supply. Plant tissue N concentrations and accumulations are positively related to plant biomass production and soil NO3−-N. Additionally, the N supply increased the richness and evenness of the soil microbial community, particularly Nitrososphaeraceae, Nitrosospira, and Nitrosomonas, which responded differently to N availability under both aCO2 and eCO2. These results underscore the importance and complexity of optimizing N supply and eCO2 for enhancing crop tissue N accumulation and yield production as well as activating nitrification-related microbial activities for soil inorganic N availability under future global environment change scenarios.

Abstract Aims To explore the lived experiences of emergency department (ED) healthcare professionals regarding visiting restrictions during the COVID‐19 pandemic. Design A qualitative phenomenology study. Methods Semi‐structured interviews were undertaken. Participants consisted of 10 physicians, 20 clinical nurses, and three managers, who were purposefully selected from two EDs in China between April and July 2021. Colaizzi's approach guided data analysis. Results Four themes arose: (i) burden moral injury, (ii) higher workload to provide and support patient‐ and family‐centered care, (iii) dissatisfied and unsafe healthcare service for patients and families, and (iv) tailoring strategies to provide family‐centered care. Patient or Public Contribution This study explored the lived experiences of ED health care professionals regarding visiting restrictions during the COVID‐19 pandemic. Noted challenges included communicating with families and ethical decision making. Strategies that support ED clinician welfare, and communication with families are warranted if visiting policy restrictions are continued or re‐introduced.

By employing headspace solid-phase microextraction gas chromatography–mass spectrometry (HS-SPME-GC-MS), this study displayed the compositional changes in volatile organic compounds (VOCs) in Tricholoma matsutake samples subjected to hot-air drying (HAD) and vacuum freeze-drying (VFD) processes from their fresh samples. A total of 99 VOCs were detected, including 2 acids, 10 aldehydes, 10 alcohols, 13 esters, 12 ketones, 24 alkanes, 14 olefins, 7 aromatic hydrocarbons, and 7 heterocyclic compounds. Notably, the drying process led to a decrease in most alcohols and aldehydes, but an increase in esters, ketones, acids, alkanes, olefins, aromatic, and heterocyclic compounds. Venn diagram (Venn), principal component analysis (PCA), and partial least squares-discriminant analysis (PLS-DA) analyses enabled an easy and rapid distinction between the VOC profiles of T. matsutake subjected to different drying methods. Among the identified VOCs, 30 were designated as marker VOCs indicative of the employed drying process. And the VFD method was more capable of preserving the VOCs of fresh T. matsutake samples than the HAD method. Benzaldehyde, 1-Octen-3-ol, 3-Octanol, and (E)-2-Octen-1-ol were identified as markers for FRESH T. matsutake. Conversely, (E)-3-Hexene, lavender lactone, and α-Pinene were associated with VFD T. matsutake. For HAD T. matsutake, olefins, pyrazine, and esters, particularly ocimene, 2,5-Dimethyl-pyrazine, and methyl cinnamate, significantly contributed to its particularities. The results from this present study can provide a practical guidance for the quality and flavor control of volatile organic compounds in preciously fungal fruiting bodies by using drying processes.

Employing elevated CO2 (eCO2), similar to increasing atmospheric CO2 in a greenhouse, is a common practice used to increase vegetable crop yields. However, the responses of nutrient availability, nutrient uptake and use efficiency in leafy vegetables to eCO2 remain largely unknown. The plant biomass production, nitrogen (N), phosphorus (P) and potassium (K) contents, nutrient uptake, and soil enzymatic activities of three Brassica chinensis varieties of ‘Longpangqing’, ‘Heimeiren’ and ‘Qingjiangbai’ were thus assessed under ambient CO2 (C0, 420/470 ppm, day/night) and eCO2 (C1, C0 + 33.3%C0; C2, C0 + 66.7%C0; and C3, C0 + 100%C0) for 4 months. Biomass production was significantly enhanced in these three tested B. chinensis varieties along with eCO2 gradients, with the highest biomass production under C3. Moreover, the eCO2 significantly increased plant N and K uptake, P and K use efficiency, soil saccharase, urease, and phosphatase activities, but decreased plant P content, soil available N and K, and catalase activity. Under eCO2, ‘Qingjiangbai’ exhibited higher biomass production and P and K uptake, without a decrease in soil available N and P. Consequently, more external fertilizer supplementation (especially N, followed by K) is required to maintain or promote Brassica chinensis yield under eCO2, while these management strategies must be carefully considered for different crop varieties.

Crop production in Afghanistan suffers from limited phosphorus (P) availability, which severely hinders national agriculture sustainability. This study hypothesized that deep fertilizer placement could significantly enhance the uptake of immobile P and, thus, tissue P accumulation and crop yield. A two-year pot experiment growing two maize (Zea mays) hybrid cultivars (Xida-789 and Xida-211) was, therefore, conducted to test these hypotheses under three contrasting fertilizer placement methods (broadcast, side band, and deep band). In doing so, P concentrations in both maize tissues and soils were compared at 45, 60, and 115 days after sowing (DAS) under nine combinations of nitrogen (N) and P fertilizer rates (kg ha−1: N112P45, N112P60, N112P75, N150P45, N150P60, N150P75, N187P45, N187P60, N187P75). Results have shown that deep band placement significantly increased P uptake efficiency, leading to greater P concentration and accumulation in maize tissues compared to the other two fertilization methods. This improved P uptake was attributed to several factors associated with deep placement, including reduced P fixation, enhanced root access to P, and moisture availability for P uptake. Additionally, deep band placement combined with higher N application rates (N187 and N150) further enhanced plant P uptake by promoting P availability and utilization mechanisms. Deep band placement also resulted in significantly higher total soil P, Olsen-P, and P use efficiency than broadcast and side band methods, indicating a more efficient P fertilization strategy for maize that can improve growth and yield. This study also found positive correlations between P concentration in plant organs and soil Olsen-P, highlighting the importance of adequate soil P levels for optimal plant growth. Overall, our results have shown that deep band fertilizer placement emerged as a superior strategy for enhancing P uptake efficiency, utilization, and maize productivity compared to broadcast and side band placement. The outcome generated from the deep band fertilization by this greenhouse study can be recommended for field practices to optimize P fertilizer use and improve maize production while minimizing potential environmental P losses associated with broadcast fertilization.

Soil compaction is one of the crucial factors that restrains the root respiration, energy metabolism and growth of peanut (Arachis hypogaea L.) due to hypoxia, which can be alleviated by ventilation. We therefore carried out a pot experiment with three treatments: no ventilation control (CK), (2) ventilation volumes at 1.2 (T1), and 1.5 (T2) times of the standard ventilation volume (2.02 L/pot). Compared to no-ventilation in compacted soil, ventilation T1 significantly increased total root length, root surface area, root volume and tips at the peanut anthesis stage (62 days after sowing), while T2 showed a negative impact on the above-mentioned root morphological characteristics. At the podding stage (S2, 95 days after sowing), both ventilation treatments improved root morphology, especially under T1. Compared to CK, both ventilation T1 and T2 decreased the activities of enzymes involving the anaerobic respiration, including root lactate dehydrogenase, pyruvate decarboxylase and alcohol dehydrogenase. The activities of antioxidant enzymes of root superoxide dismutase, peroxidase and catalase also decreased at S1, while superoxide dismutase and peroxidase significantly increased under T1 at S2. The ventilation of compacted soil changed soil nitrogen-fixing bacterial communities, with highest bacterial alpha diversity indices under T1. The Pearson correlation analyses indicated a positive relationship between the relative abundance of Bradyrhizobiaceae and root activity, and between unclassified_family of Rhizobiales and the root surface area, while Enterobacteriaceae had a negative impact on the root nodule number. The Pearson correlation test showed that the root surface, tips and activity positively correlated with root superoxide dismutase and peroxidase activities. These results demonstrate that soil ventilation could enhance plant root growth, the diversity and function of soil nitrogen-fixing bacterial communities. The generated results from this present study could serve as important evidence in alleviating soil hypoxia caused by compaction.

Citrus is the largest fruit crop around the world, while high nitrogen (N) application in citrus orchards is widespread in many countries, which results not only in yield, quality and environmental issues but also slows down the establishment of citrus canopies in newly cultivated orchards. Thus, the objective of this study was to investigate the physiological inhibitory mechanism of excessive N application on the growth of citrus seedlings. A pot experiment with the citrus variety Orah (Orah/Citrus junos) at four N fertilization rates (0, 50, 100, and 400 mg N/kg dry soil, denoted as N0, N50, N100, and N400, respectively) was performed to evaluate the changes of root morphology, biomass, N accumulation, enzyme activities, and so on. The results showed that the N400 application significantly reduced the total biomass (from 14.24 to 6.95 g/Plant), N accumulation (from 0.65 to 0.33 g/Plant) and N use efficiency (92.69%) in citrus seedlings when compared to the N100 treatment. The partial least squares pathway model further showed that the decline of biomass and N accumulation by high N application were largely attributed to the reduction of root growth through direct and indirect effects (the goodness of fit under the model was 0.733.) rather than just soil N transformation and activity of root N uptake. These results are useful to optimize N management through a synergistic N absorption and utilization by citrus seedlings.

Arbuscular mycorrhizal fungi (AMF) are ubiquitous in soil and form nutritional symbioses with ~80% of vascular plant species, which significantly impact global carbon (C) and nitrogen (N) biogeochemical cycles. Roots of plant individuals are interconnected by AMF hyphae to form common AM networks (CAMNs), which provide pathways for the transfer of C and N from one plant to another, promoting plant coexistence and biodiversity. Despite that stable isotope methodologies (13C, 14C and 15N tracer techniques) have demonstrated CAMNs are an important pathway for the translocation of both C and N, the functioning of CAMNs in ecosystem C and N dynamics remains equivocal. This review systematically synthesizes both laboratory and field evidence in interplant C and N transfer through CAMNs generated through stable isotope methodologies and highlights perspectives on the system functionality of CAMNs with implications for plant coexistence, species diversity and community stability. One-way transfers from donor to recipient plants of 0.02-41% C and 0.04-80% N of recipient C and N have been observed, with the reverse fluxes generally less than 15% of donor C and N. Interplant C and N transfers have practical implications for plant performance, coexistence and biodiversity in both resource-limited and resource-unlimited habitats. Resource competition among coexisting individuals of the same or different species is undoubtedly modified by such C and N transfers. Studying interplant variability in these transfers with 13C and 15N tracer application and natural abundance measurements could address the eco physiological significance of such CAMNs in sustainable agricultural and natural ecosystems.

Balanced nitrogen (N) and phosphorus (P) rates, coupled with rational fertilization methodology, could promote crop N accumulation, N use efficiency, and yield production, particularly in semi-arid and arid regions. To test these characteristics, a two-year (2018 and 2019) pot experiment was performed by growing summer maize in a rain-proof glass greenhouse under nine combined N (112, 150, and 187 kg ha−1, urea) and P (45, 60, and 75 kg ha−1 calcium superphosphate) rates and three contrasting fertilizer placements. The fertilizers were placed by broadcast on the soil surface (Broadcast), a side band on a 4 cm strip of soil surface within 7 cm from the sowing line (Side band), and a deep band on a 4 cm strip below 7 cm soil depth within 7 cm from the sowing line (Deep band). Results from three maize growth stages (eight-leaf, 45 days after sowing, DAS; tasseling, 60 DAS; and harvest, 115 DAS) showed that leaf, stem, root N accumulation, and total soil N were significantly increased under Deep band than under both Side band and Broadcast at N150P60, N187P60, N150P75, and N187P75, but not at N112P45, N150P45, N187P45, N112P60, and N112P75. Significantly greater leaf, stem, and root N accumulations were also displayed at N150 and N187 than at N112 for the same P60 or P75 under the Deep band at 60 DAS and 115 DAS; while for leaf and stem, N accumulations were greater at P75 and P60 than at P45 for the same N150 under Deep band at 45 DAS, 60 DAS, and 115 DAS. Significantly greater agronomy N use efficiency, partial factor productivity, and N use efficiency were exhibited under the Deep band than under the Side band and Broadcast at N150P75 and N187P75, but at N150P60 and N187P60 for NUE only. In addition, leaf, stem, seed, and root N concentrations positively correlated with their own N accumulations or soil N concentrations at the tasseling and harvest stages. Our results demonstrate that a synchronized N150P60, N187P60, N150P75, or N187P75 fertilization rate with Deep band placement can improve soil N availability and root N uptake, and thereby, increase aboveground N accumulation, N use efficiency, and yield production of maize, which is particularly practical for small-holder farmers globally.

From the perspective of corporate social responsibility (CSR) of the e-commerce platform, this paper investigates the choice of e-commerce platform for wholesale sales, agency sales, and hybrid sales modes when the manufacturer has both an offline retail channel and an e-commerce platform channel. Taking the e-commerce platform as the dominant player and considering factors such as the potential market size of the e-commerce platform, consumers’ sensitivity to CSR input level, and the CSR input cost coefficient, we constructed a Stackelberg game model under the wholesale sales, agency sales, and hybrid sales modes. We explored the impact of the e-commerce platform’s CSR behavior on the choice of its sales modes as well as on the members of the supply chain. The findings indicate that, irrespective of the consumers’ sensitivity to CSR level and CSR input cost coefficient, the e-commerce platform tends to adopt the hybrid sales mode when its potential market size is smaller. Moreover, when the potential market size is larger, the wholesale sales mode is preferred; only when the potential market size is moderate, and consumers are less sensitive to CSR input level or CSR input cost coefficient is higher, the e-commerce platform will choose the agency sales mode. The increase in the potential market size of the e-commerce platform and the consumers’ sensitivity to CSR input level is conducive to the rise in the profits of the e-commerce platform, and the increase in the CSR input cost coefficient makes the profits of the e-commerce platform decrease. At the same time, the demand for the e-commerce platform increases as consumers become more sensitive to CSR input level or as the potential market size of the e-commerce platform increases. In contrast, the reduction in the CSR input cost coefficient negatively affects the demand for the e-commerce platform.

Background: Exons are an important part of genes. However, there has been no molecular marker technique based on single primer amplification developed for exons region. Results: A novel molecular marker technique called exon based amplified polymorphism (EBAP) which used single primer to perform the PCR was developed. Single primers were designed based on the rich GC bases in the exon region of genes. The single primer consists of filling sequence, intermediate core region sequence and selective bases sequence. The filling sequence has a total of six bases, which can be 2A and 2T or 3A and 3T. The intermediate core region sequence consists of eight bases, all of which are G and C, but at least 2G or 2C are required. The first of the three selective bases must be either A or T, and the second and third are arbitrary bases. Due to the principle of primer design, these single primers should be universal. We applied it to the DNA polymorphisms detection of maize, sugarcane, potato, cassava, cabbage, and peanut. The results showed that it detected more abundant DNA polymorphisms in the first five crops, but not in the cultivated peanut. In addition, different band patterns were obtained by amplifying peanut cDNA with different single primers. Conclusions: We have developed a novel and universal molecular marker technique. It is simple, fast and efficient. It does not require genomic sequence information. It can be widely used in germplasm identification, genetic diversity analysis, and molecular fingerprinting. How to cite: Xiong F, Liu J, Tang R, et al. Exon based amplified polymorphism (EBAP): A novel and universal molecular marker for plants. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2022.01.001.

Common mycorrhizal networks (CMNs) that connect individual plants of the same or different species together play important roles in nutrient and signal transportation, and plant community organization. However, about 10% of land plants are non-mycorrhizal species with roots that do not form any well-recognized types of mycorrhizas; and each mycorrhizal fungus can only colonize a limited number of plant species, resulting in numerous non-host plants that could not establish typical mycorrhizal symbiosis with a specific mycorrhizal fungus. If and how non-mycorrhizal or non-host plants are able to involve in CMNs remains unclear. Here we summarize studies focusing on mycorrhizal-mediated host and non-host plant interaction. Evidence has showed that some host-supported both arbuscular mycorrhizal (AM) and ectomycorrhizal (EM) hyphae can access to non-host plant roots without forming typical mycorrhizal structures, while such non-typical mycorrhizal colonization often inhibits the growth but enhances the induced system resistance of non-host plants. Meanwhile, the host growth is also differentially affected, depending on plant and fungi species. Molecular analyses suggested that the AMF colonization to non-hosts is different from pathogenic and endophytic fungi colonization, and the hyphae in non-host roots may be alive and have some unknown functions. Thus we propose that non-host plants are also important CMNs players. Using non-mycorrhizal model species Arabidopsis, tripartite culture system and new technologies such as nanoscale secondary ion mass spectrometry and multi-omics, to study nutrient and signal transportation between host and non-host plants via CMNs may provide new insights into the mechanisms underlying benefits of intercropping and agro-forestry systems, as well as plant community establishment and stability.

Here the authors show that the Koolen-de Vries syndrome associated gene KANSL1 modulates autophagosome-lysosome fusion via transcriptional regulation of autophagosomal gene Syntaxin17, and that 13-cis retinoic acid can reverses mitophagic defects and neurobehavioural abnormalities of mice lacking Kansl1.

Black truffles and white truffles are widely studied around the world, but their effects on plant growth and physiological responses, and on the mycorrhizosphere bacterial community of the host plant remain unclear. Here, mycorrhizal colonization of Castanopsis rockii by Tuber indicum (Chinese black truffle) and T. lijiangense (Chinese white truffle), respectively, was induced in a greenhouse study, and their effects on host growth, physiological responses and mycorrhizosphere bacterial communities were compared. The results show that colonization of both Tuber species significantly increased leaf photosynthetic rate, leaf P concentration and mycorrhizosphere acid phosphatase activity, as well as richness of mycorrhizosphere bacterial communities of C. rockii seedlings. However, T. indicum colonization on the one hand significantly decreased tartrate content, bacterial acid phosphatase, phoC gene abundance in the mycorrhizosphere, and peroxidase (POD) activity of ectomycorrhizal root tips, but on the other hand increased mycorrhizosphere pH and superoxide dismutase (SOD) of ectomycorrhizal root tips, compared to T. lijiangense colonization. Moreover, principal coordinate and β-diversity analyses show significant differences in mycorrhizosphere bacterial community composition between T. indicum and T. lijiangese colonized C. rockii seedlings. Finally, the relative abundance of the bacterium Agromyces cerinus significantly correlated to mycorrhizosphere acid phosphatase activity and leaf P concentration, suggesting that this bacterium might play an important role in P mobilization and acquisition. Overall, these results suggest that T. indicum and T. lijiangense differently regulate their host plant’s physiological responses and mycorrhizosphere bacterial community.

The objectives of this study were to evaluate the effects of splitting application of 30 kg N ha-1 on the growth, yield and economics of soybean (Glycine max var. Dea-won) in the semi-arid and sub-tropical Afghanistan. Besides no-N-fertilization control, urea (30 kg N ha-1) was applied to fields in four-splits: S1, one time basal application at sowing; S2, two-splits of 50% N at sowing and 10 DAS (days after sowing); S3, three-splits of 33% N at sowing, 10 and 20 DAS; and S4, four-splits of 25% N at sowing, 10, 20 and 30 DAS. Aboveground growth and yield parameters were compared at 30, 60, 90 and 127 DAS. Soybean’s growth and yields increased in corresponding with the increased frequency of split fertilization. Three- or four-splits significantly increased plant height, leaf area index, aboveground biomass, crop growth rate, net assimilation rate, relative growth rate, pod and seed numbers, 1,000-seed weight, yield production and economics (gross and net returns and benefit cost ratio) than those at one or two-splits N-application at all these four harvests. Positive relationships were observed among growth parameters and yield traits and yield production. Three- or four-splits at tested N rate and growth stages can meet N requirement for soybean’s growth and yield while improving N use efficiency in semi-arid Afghanistan.

Abstract Background Litchi is a well-known subtropical fruit crop. However, irregular bearing attributed to unstable flowering is a major ongoing problem for the development of the litchi industry. In a previous study, our laboratory proved that litchi flowering was induced by low temperature and that a FLOWERING LOCUS T (FT) homologue gene named LcFT1 played a pivotal role in this process. The present study aimed to understand the natural variation in FT among litchi germplasm resources and designed markers to verify easy- and difficult-flowering litchi germplasms. A grafting experiment was also carried out to explore whether it could shorten the seedling stage of litchi seedlings. Results Two types of LcFT1 promoter existed in different litchi germplasm resources, and we named them the ‘easy-flowering type of LcFT1 promoter’ and ‘difficult-flowering type of LcFT1 promoter’, which resulted in three different LcFT1 genotypes of litchi germplasm resources, including the homozygous easy-flowering type of the LcFT1 genotype, homozygous difficult-flowering type of the LcFT1 genotype and heterozygous LcFT1 genotype of litchi germplasm resources. The homozygous easy-flowering type of the LcFT1 genotype and heterozygous LcFT1 genotype of the litchi germplasm resources completed their floral induction more easily than the homozygous difficult-flowering type of the LcFT1 genotype of litchi germplasm resources. Herein, we designed two kinds of efficient molecular markers based on the difference in LcFT1 promoter sequences and applied them to identify of the easy- and difficult-flowering litchi germplasm resources. These two kinds of molecular markers were capable of clearly distinguishing the easy- from difficult-flowering litchi germplasm resources at the seedling stage and provided the same results. Meanwhile, grafting the scion of seedlings to the annual branches of adult litchi trees could significantly shorten the seedling stage. Conclusions Understanding the flowering characteristics of litchi germplasm resources is essential for easy-flowering litchi breeding. In the present study, molecular markers provide a rapid and accurate approach for identifying the flowering characteristics. The application of these molecular markers not only significantly shortened the artificial crossbreeding cycle of easy-flowering litchi cultivars but also greatly saved manpower, material resources and land.

IntroductionAnaerobic ammonium oxidation (anammox) plays a vital role in the global nitrogen cycle by oxidizing ammonium to nitrogen under anaerobic environments. However, the existence, abundance, and diversity of anammox bacteria between different temperatures are less studied, particularly in purple paddy soils.Methods13C-DNA stable-isotope probe combined with Illumina MiSeq high-throughput sequencing was employed to explore soil abundance and diversity of anammox bacteria. In doing so, 40–60 cm depth soils from typical purple paddy soils in Chongqing, southwest China, were cultured under 12CO2-labeled and 13CO2-labeled at 35°C, 25°C, 15°C, and 5°C for 56 days.Results and DiscussionAnammox bacteria were not labeled at all by 13CO2 at 5°C. The highest abundance of anammox bacteria was found at 25°C (3.52 × 106~3.66 × 106 copies·g−1 dry soil), followed by 35°C and 15°C (2.01 × 106~2.37 × 106 copies·g−1 dry soil) and almost no increase at 5°C. The relative abundance of Candidatus Jettenia sp. was higher at 25°C and 15°C, while Candidatus Brocadia sp. was higher at 35°C and 5°C. Our results revealed differences in anammox bacteria at different temperatures in purple paddy soils, which could provide a better understanding of soil N cycling regulated by anammox bacteria.

CONSTANS/CONSTANS-like (CO/COL) transcription factors play a vital role in the photoperiodic flowering pathway. However, the biological functions of COL genes in mango are unclear. In this study, we identified 31 COL genes from the ‘Jin Huang’ mango genome and divided them into three groups according to the specific gene structure and protein domain characteristics. These 31 MiCOL genes were heterogeneously distributed on 14 chromosomes. Expression pattern analysis showed that most MiCOL genes were mainly expressed in leaves and stems and during the floral induction period, followed by the floral differentiation period. The expression of COL genes was induced by drought and salt stress, but the expression patterns of different genes were different, which may suggest that MiCOL genes are involved in the abiotic stress response of mango. Under salt and drought conditions, two MiCOL9 genes can improve the resistance of Arabidopsis by improving the scavenging ability of ROS and proline accumulation and reducing the MDA content. Additionally, overexpression of MiCOL9 genes significantly inhibited flowering in transgenic Arabidopsis. This work provides an important foundation for understanding the biological roles of mango COL genes in plant growth, development and stress responses.

Morel mushrooms are iconic ascomycetes that are economically valuable and have attracted the attention of a large number of scientific researchers around the world. However, the tendency of morel fungi to undergo heterokaryosis through plasmogamy is not well understood. In this study, three populations of stipe tissue isolates were isolated from ascocarps of Mel-21 (Morchella sp.). Mating type gene analysis showed that a large proportion of the mating type idiomorphs were missing in the population. According to the mating type structure, one population could be divided into three categories: isolates containing the only Mat1-1, the only Mat1-2, and both isolated containing both Mat1-1 and Mat1-2 idiomorphs. While random amplified polymorphism DNA (RAPD) molecular markers showed clear polymorphisms among the tissue isolates from the same ascocarp, and there was no consistency between this polymorphism and the mating type structure. The characteristic band of RAPD was further developed into a more specific and stable sequence-characterized amplified region (SCAR) marker to further detect the isolate population, and the results were consistent with the RAPD polymorphism. This study showed that the stipe tissue of Mel-21 morel ascocarp had obvious genetic diversity and was more than two homogenous karyotypes. We speculated that this might be due to the frequent fusion of the hyphae germinated by the genetically diverse ascospores in nature, which eventually led to the heterokaryotic state in the stipe of the ascocarps. This heterokaryotic state should be related to the competition at the nucleus level and/or the heterogeneous distribution of nuclei in the tissue. This genetic polymorphism might be related to the character diversity, ecological environment diversity and rapid species evolution of Morchella.

Soil acidification often occurs when the concentration of ammonium (NH4+) in soil rises, such as that observed in farmland. Both soil acidification and excess NH4+ have serious adverse effects on crop growth and food production. However, we still do not know which of these two inhibitors has a greater impact on the growth of crops, and the degree of their inhibitory effect on crop growth have not been accurately evaluated. 31 wheat cultivars originating in various areas of China were planted under 5 mM sole NH4+ (ammonium nitrogen, AN) or nitrate nitrogen in combined with two pH levels resembling acidified conditions (5.0 and 6.5). The results showed that the shoots and roots biomass were severely reduced by AN in both and these reduction effects were strengthened by a low medium pH. The concentration of free NH4+ and amino acids, the glutamine synthetase activity were significantly higher, but the total soluble sugar content was reduced under NH4+ conditions, and the glutamine synthetase activity was reduced by a low medium pH. Cultivar variance was responsible for the largest proportion of the total variance in plant dry weight, leaf area, nodal root number, total root length and root volume; the nitrogen (N) form explains most of the variation in N and C metabolism; the effects of pH were the greatest for plant height and root average diameter. So, soil acidification and excess NH4+ would cause different degrees of inhibition effects on different plant tissues. The findings are expected to be useful for applying effective strategies for reducing NH4+ stress in the field.

It is important to quantify nutrient requirements and optimize fertilization to improve peanut yield and fertilizer use efficiency. In this study, a multi-site field trial was conducted from 2020 to 2021 in the North China Plain to estimate nitrogen (N), phosphorus (P), and potassium (K) uptake and requirements of peanuts, and to evaluate the effects of fertilization recommendations from the regional mean optimal rate (RMOR) on dry matter, pod yield, nutrient uptake, and fertilizer use efficiency. Results show that compared with farmer practice fertilization (FP), optimal fertilization (OPT) based on the RMOR increased peanut dry matter by 6.6% and pod yield by 10.9%. The average uptake rates of N, P, and K were 214.3, 23.3, and 78.4 kg/ha, respectively, with 76.0% N harvest index, 59.8% P harvest index, and 41.4% K harvest index. The OPT treatment increased N, P, and K uptake by 19.3%, 7.3%, and 11.0% compared with FP, respectively. However, the average of yield, nutrition uptake, and harvest indexes of N, P, and K were not significantly affected by fertilization. The peanut required 42.0 kg N, 4.6 kg P, and 15.3 kg K to produce 1000 kg of pods. The OPT treatment significantly improved the N partial factor productivity and N uptake efficiency but decreased the K partial factor productivity and K uptake efficiency. The present study demonstrates that fertilizer recommendations from RMOR improve N use efficiency, and reduce N and P fertilizer application without yield loss in regions with smallholder farmers, and the corresponding estimation of nutrient requirements helps to make peanut fertilization recommendations.

High nitrogen (N) input to soil can cause higher nitrous oxide (N2O) emissions, that is, a higher N2O/(N2O+N2) ratio, through an inhibition of N2O reductase activity and/or a decrease in soil pH. We assumed that there were two mechanisms for the effects of N input on N2O emissions, immediate and long-term effect. The immediate effect (field applied fertilizer N) can be eliminated by decreasing the N input, but not the long-term effect (soil accumulated N caused by long–term fertilization). Therefore, it is important to separate these effects to mitigate N2O emissions. To this end, soil samples along a 0‒5.2 m profile were collected from a long-term N fertilization experiment field with two N application rates, that is, 600 kg N ha-1 year-1 (N600) and no fertilizer N input (N0). External N addition was conducted for each subsample in the laboratory incubation study to produce two additional treatments, which were denoted as N600+N and N0+N treatments. The results showed that the combined immediate and long-term effects led to an increase in the N2O/(N2O+N2) ratio by 6.8%. Approximately 32.6% and 67.4% of increase could be explained by the immediate and long-term effects of N input, respectively. Meanwhile, the long-term effects were significantly positively correlated to soil organic carbon (SOC). These results indicate that excessive N fertilizer input to the soil can lead to increased N2O emissions if the soil has a high SOC content. The long-term effect of N input on the N2O/(N2O+N2) ratio should be considered when predicting soil N2O emissions under global environmental change scenarios.

Currently. the factors that drive the microbiome associated with truffles, the most highly prized fungi in the world, are largely unknown. We demonstrate for the first time here that truffle microbiome composition is strongly driven by associated compartments rather than by symbiotic host trees.

True morels (Morchella, Pezizales) are world-renowned edible mushrooms (ascocarps) that are widely demanded in international markets. Morchella has been successfully artificially cultivated since 2012 in China and is rapidly becoming a new edible mushroom industry occupying up to 16,466 hectares in the 2021–2022 season. However, nearly 25% of the total cultivation area has annually suffered from fungal diseases. While a variety of morel pathogenic fungi have been reported their epidemic characteristics are unknown, particularly in regional or national scales. In this paper, ITS amplicon sequencing and microscopic examination were concurrently performed on the morel ascocarp lesions from 32 sites in 18 provinces across China. Results showed that Diploöspora longispora (75.48%), Clonostachys solani (5.04%), Mortierella gamsii (0.83%), Mortierella amoeboidea (0.37%) and Penicillium kongii (0.15%) were the putative pathogenic fungi. The long, oval, septate conidia of D. longispora was observed on all ascocarps. Oval asexual spores and sporogenic structures, such as those of Clonostachys, were also detected in C. solani infected samples with high ITS read abundance. Seven isolates of D. longispora were isolated from seven selected ascocarps lesions. The microscopic characteristics of pure cultures of these isolates were consistent with the morphological characteristics of ascocarps lesions. Diploöspora longispora had the highest amplification abundance in 93.75% of the samples, while C. solani had the highest amplification abundance in six biological samples (6.25%) of the remaining two sampling sites. The results demonstrate that D. longispora is a major culprit of morel fungal diseases. Other low-abundance non-host fungi appear to be saprophytic fungi infecting after D. longispora. This study provides data supporting the morphological and molecular identification and prevention of fungal diseases of morel ascocarps.

Aluminum (Al) toxicity severely decreases plant growth and productivity in acidic soil globally. Ectomycorrhizal (ECM) fungi can promote host plant’s Al-tolerance by acting as a physical barrier or bio-filter. However, little information is available on the role of ECM fungus on Al immobilization with respect to Al-tolerance. This present study aimed to screen a promising indigenous ECM fungus with high Al-tolerance and to understand its role in Al immobilization related to Al-tolerance. Two ECM fungal strains (Lactarius deliciosus 2 and Pisolithus tinctorius 715) isolated from forest stands in Southwest China were cultured in vitro with 0.0, 1.0 or 2.0 mM Al addition for 21 days to compare their Al accumulation and Al-tolerance. Meanwhile, fungal mycelia were incubated in 0.037 mM Al3+ solutions, and then Al3+ concentrations in the solution were determined at time 2, 5, 10, 20, 40, 60, 120, 180, and 240 min, and the Al3+ immobilization characteristics were evaluated using the pseudo-first order, pseudo-second order and intraparticle diffusion models. Results showed that 1.0 or 2.0 mM Al3+ addition significantly increased fungal biomass production by 23% or 41% in L. deliciosus 2, not in P. tinctorius 715. Fungal Al3+ concentrations in L. deliciosus 2 and P. tinctorius 715 were significantly increased by 293% and 103% under 2.0 mM than under 1.0 mM Al3+ addition. The pH values in the culture solution were significantly decreased by 0.43 after 21 d fungus growth but no changes between these two fungi under the same Al3+ addition. Fungal Al3+ immobilization showed a three-stage trend with initially a rapid rate followed a relatively slower rate until reaching equilibrium. The pseudo-second order model was the best (R2 = 0.98 and 0.99 for L. deliciosus 2 and P. tinctorius 715) to fit the experimentally observed data among the three models. Compared to P. tinctorius 715, L. deliciosus 2 also had greater intercept value, cation exchange capacity (CEC), and extracellular Al3+ proportion in fungal mycelia. Additionally, bio-concentration on Al3+, active site numbers for Al3+, boundary layer thickness, CEC, and immobilization on the cell wall in fungal mycelia were involved in ECM fungal Al-tolerance. These results show that both ECM fungi are Al-tolerant while L. deliciosus 2 is a promising indigenous ECM isolate with higher Al-tolerance in Southwest China, and they can be hence applied to the afforestation and ecological restoration in acidic soil.

Thelephora ganbajun is a wild edible mushroom highly appreciated throughout China. The microbiomes of some fungal sporocarps have been studied, however, their potential functional roles currently remain uncharacterized. Here, functional gene microarrays (GeoChip 5.0) and amplicon sequencing were employed to define the taxonomic and functional attributes within three micro-niches of T. ganbajun. The diversity and composition of bacterial taxa and their functional genes differed significantly (p < 0.01) among the compartments. Among 31,117 functional genes detected, some were exclusively recorded in one sporocarp compartment: 1,334 genes involved in carbon (mdh) and nitrogen fixation (nifH) in the context; 524 genes influencing carbon (apu) and sulfite reduction (dsrB, dsra) in the hymenophore; and 255 genes involved in sulfur oxidation (soxB and soxC) and polyphosphate degradation (ppx) in the pileipellis. These results shed light on a previously unknown microbiome and functional gene partitioning in sporome compartments of Basidiomycota. This also has great implications for their potential ecological and biogeochemical functions, demonstrating a higher genomic complexity than previously thought.

Almost all elevated atmospheric CO2 concentrations (eCO2) studies have not addressed the potential responses of plant growth to different CO2 in daytime and nighttime. The present study was to determine the impact of daytime and/or nighttime eCO2 on growth and quality of mulberry (Morus alba L.), a perennial multipurpose cash plant. Six-month-old mulberry seedlings were hence grown in environmentally auto-controlled growth chambers under four CO2 concentrations: (1) ambient CO2 (ACO2, 410 μmol mol–1 daytime/460 μmol mol–1 nighttime), (2) sole daytime elevated CO2 (DeCO2, 710 μmol mol–1/460 μmol mol–1), (3) sole nighttime elevated CO2 (NeCO2, 410 μmol mol–1/760 μmol mol–1), and (4) continuous daytime and nighttime elevated CO2 (D + NeCO2, 710 μmol mol–1/760 μmol mol–1). Plant growth characteristics, nutrient uptake, and leaf quality were then examined after 120 days of CO2 exposure. Compared to control, DeCO2 and (D + N)eCO2 increased plant biomass production and thus the harvest of nutrients and accumulation of leaf carbohydrates (starch, soluble sugar, and fatty acid) and N-containing compounds (free amino acid and protein), though there were some decreases in the concentration of leaf N, P, Mg, Fe, and Zn. NeCO2 had no significant effects on leaf yield but an extent positive effect on leaf nutritional quality due to their concentration increase in leaf B, Cu, starch, and soluble sugar. Meanwhile, (D + N)eCO2 decreased mulberry leaf yield and harvest of nutritious compounds for silkworm when compared with DeCO2. The reason may be associated to N, P, Mg, Fe, and Zn that are closely related to leaf pigment and N metabolism. Therefore, the rational application of mineral nutrient (especially N, P, Fe, Mg, and Zn) fertilizers is important for a sustainable mulberry production under future atmosphere CO2 concentrations.

Photosynthesis of wheat and maize declined when grown with NH4+ as a nitrogen (N) source at ambient CO2 concentration compared to those grown with a mixture of NO3– and NH4+, or NO3– as the sole N source. Interestingly, these N nutritional physiological responses changed when the atmospheric CO2 concentration increases. We studied the photosynthetic responses of wheat and maize growing with various N forms at three levels of growth CO2 levels. Hydroponic experiments were carried out using a C3 plant (wheat, Triticum aestivum L. cv. Chuanmai 58) and a C4 plant (maize, Zea mays L. cv. Zhongdan 808) given three types of N nutrition: sole NO3– (NN), sole NH4+ (AN) and a mixture of both NO3– and NH4+ (Mix-N). The test plants were grown using custom-built chambers where a continuous and desired atmospheric CO2 (Ca) concentration could be maintained: 280 μmol mol–1 (representing the pre-Industrial Revolution CO2 concentration of the 18th century), 400 μmol mol–1 (present level) and 550 μmol mol–1 (representing the anticipated futuristic concentration in 2050). Under AN, the decrease in net photosynthetic rate (Pn) was attributed to a reduction in the maximum RuBP-regeneration rate, which then caused reductions in the maximum Rubisco-carboxylation rates for both species. Decreases in electron transport rate, reduction of electron flux to the photosynthetic carbon [Je(PCR)] and electron flux for photorespiratory carbon oxidation [Je(PCO)] were also observed under AN for both species. However, the intercellular (Ci) and chloroplast (Cc) CO2 concentration increased with increasing atmospheric CO2 in C3 wheat but not in C4 maize, leading to a higher Je(PCR)/ Je(PCO) ratio. Interestingly, the reduction of Pn under AN was relieved in wheat through higher CO2 levels, but that was not the case in maize. In conclusion, elevating atmospheric CO2 concentration increased Ci and Cc in wheat, but not in maize, with enhanced electron fluxes towards photosynthesis, rather than photorespiration, thereby relieving the inhibition of photosynthesis under AN. Our results contributed to a better understanding of NH4+ involvement in N nutrition of crops growing under different levels of CO2.

Abstract Background Understanding the production trend of the major food crops is an important step for any nation that evaluates her agricultural progress. This evaluation should mostly focus on the yields per unit area. So far, it can also earmark the expansion of farms to determine the general yields trend. The main objective of this paper is to assess the production trend of the major food crops and their efficacy to food security in Tanzania. This is particular important because for the past three decades, the country has failed to control food security (especially food availability and accessibility). Results Here, crop data from 1980 to 2015 were gathered from the Ministry of Agriculture, Livestock and Fishery (MALF), and in the respective regions. In some incidences, the regional data were averaged to elicit their preciseness. To determine the objectivity of this study, agricultural policy, programs, and plans from MALF were reviewed for similar purpose. Mostly, the Mann-Kendal Test and Microsoft Excel were used for data analyses. The results show that the production of the total yields had a positive trend (i.e., growing at R 2 = 0.4 and 0.8), while that of the yields (ton/ha) had a negative trend (i.e., declining at R 2 = 0.02 and 0.3). It was further realized that the total yields mostly boomed due to farm expansion. Conclusions Despite the efforts from various agricultural stakeholders, the country has not yet achieved a sustainable crop yield and food security. Explicitly, this situation has been affecting peoples’ livelihoods, and other sectors either directly or indirectly. Therefore, there is a need to improve the production strategies and approaches (i.e., more especially technology and marketing) to limit this problem.

Introduction: The consequences of climate change have been considerably high to smallholders in most of Sub-Saharan Africa. These impacts have been more enormous to crop production and other attached livelihoods. However, the comprehensive assessment of these impacts has suffered numerous challenges because crop productivity is also susceptible to other factors involved in the production process. This study aimed to understand how crop yields are affected by climate change in the semiarid zone of Tanzania. The findings would establish a thorough literature within smallholder adaptation in the area. Furthermore, they will intensify strategies to cope with reduced yields attributed by climate-change impacts. Outcomes: There has been a dramatic decrease in rainfall (R2 = 0.21) and increase in temperature (R2 = 0.30). In addition, we found that rainfall and temperature variability had positive (R2 ~ 0.5) and negative (R2 ~ 0.3) correlations with crop yields, respectively. Discussion: The decline in yields at both local and national levels elevated the magnitude of food shortage and poverty. The increasing climate impacts necessitate undertakings of various studies to plan, design, recommend, and implement various useful adaptation measures, especially in the vulnerable communities. Conclusion: To limit climate effects, we need to increase investments in adaptation and mitigation measures.

Introduction: To estimate differential accumulation of soil organic carbon (SOC) and its ecological significance is very important to smallholder farmers in the Tanzania’s semiarid areas. This study investigated the accumulation of SOC and other important soil nutrients under organic and no-fertilizations, and correlated SOC with crop yields. Using data from long-term experimental study sites of semiarid in Tanzania, we estimated SOC accumulation in different soil treatments and depths where a total of 128 soil samples were collected at the depths of 0–20 cm and 20–40 cm from two villages (sites) with organic fertilization and no-fertilization treatments. Sites under organic fertilization were defined as those which have received manure fertilization for more than 5 years on continuum basis. Outcomes: The accumulation of SOC was significantly greater in soils under organic fertilizations (1.15 and 0.80 MgC ha−1 at soil depth and 20–40 cm) and decreased with increasing soil depths. Similarly, TN and P decreased from 0.40 and 2.40 Mg (0–20 cm) to 0.16 and 2.10 Mg (20–40 cm), respectively. Other important soil nutrients such as calcium (Ca2+), potassium (K+), magnesium (Mg2+), and sodium (Na+) had similar pattern. In addition, soil bulk density was less under organic fertilization (1.1 g/cm3) than under no-fertilization (1.2 g/cm3) and it increased with soil depths. Correspondingly, the crop yields were significantly higher (1.6 tn ha−1) under organic fertilizations than (0.6 tn ha−1) under no-fertilizations indicating that crop yields were significantly affected by SOC. Discussion: Organic fertilization i.e., especially cattle manure in the area has considerable fertility potential. To optimize soil fertility potential, we need to consider such kind of fertilization from household to national level. Conclusion: Our results demonstrated that manure application was the best fertilization method for improving soil fertility in most croplands of Tanzania’s semiarid areas, especially in this era of climate change scenarios.

Fruit abscission is triggered by multiple changes in endogenous components of the fruit, including energy metabolism. However, it is still unknown how the core energy metabolism pathways are modified during fruit abscission. Here, we investigated the relationship between carbon starvation-induced fruitlet abscission and energy metabolism changes in litchi. The fruitlet abscission of litchi ‘Feizixiao’ was induced sharply by girdling plus defoliation (GPD), a carbon stress treatment. Using liquid chromatography tandem mass spectrometry (LC-MS/MS) targeted metabolomics analysis, we identified a total of 21 metabolites involved in glycolysis, TCA cycle and oxidative phosphorylation pathways. Among them, the content of most metabolites in glycolysis pathways and TCA cycles was reduced, and the activity of corresponding metabolic enzymes such as ATP-dependent phosphofructokinase (ATP-PFK), pyruvate kinase (PK), citrate synthase (CS), succinate thiokinase (SAT), and NAD-dependent malate dehydrogenase (NAD-MDH) was decreased. Consistently, we further showed that the expression of the relative genes (LcPFK2, LcPK2, LcPK4, LcCS1, LcCS2, LcSAT, LcMDH1 and LcMDH2) was also significantly down-regulated. In contrast, the level of ATP, an important metabolite in the oxidative phosphorylation pathway, was elevated in parallel with both higher activity of H+-ATPase and the increased expression level of LcH+-ATPase1. In conclusion, our findings suggest that carbon starvation can induce fruitlet abscission in litchi probably by energy depletion that mediated through both the suppression of the glycolysis pathway and TCA cycle and the enhancement of the oxidative phosphorylation pathway.

Global food insecurity is becoming more severe under the threat of rising global carbon dioxide concentrations, increasing population, and shrinking farmlands and their degeneration. We acquired the ISI Web of Science platform for over 31 years (1988–2018) to review the research on how climate change impacts global food security, and then performed cluster analysis and research hotspot analysis with VosViewer software. We found there were two drawbacks that exist in the current research. Firstly, current field research data were defective because they were collected from various facilities and were hard to integrate. The other drawback is the representativeness of field research site selection as most studies were carried out in developed countries and very few in developing countries. Therefore, more attention should be paid to developing countries, especially some African and Asian countries. At the same time, new modified mathematical models should be utilized to process and integrate the data from various facilities and regions. Finally, we suggested that governments and organizations across the world should be united to wrestle with the impact of climate change on food security.

The traditional manure management strategy, based on crop N needs, results in accumulation of phosphorus (P) in soil due to the imbalance of N/P ratio between crop requirement and manure supply. This study was conducted from 2004 to 2013 to evaluate the effects of P-based liquid and solid swine manure (LMP and SMP, for P-based liquid and solid swine manure, respectively) application, in comparison with N-based application (LMN and SMN, for N-based liquid and solid swine manure, respectively), on crop yield and soil residual P under corn (Zea mays L.)–soybean (Glycine max L.) rotation in a Brookston clay loam soil of the Lake Erie basin, ON, Canada. Chemical fertilizer P (CFP) and non-P treatments were included as controls (CK). For liquid manure treatments, corn yield for LMN showed a lower annual corn yield (7.82 Mg ha−1) than LMP (9.36 Mg ha−1), and their differences were even statistically significant at p < 0.05 in some cropping years. The annual corn yield of LMP was also higher than those of SMP (7.45 Mg ha−1) and SMN (7.41 Mg ha−1), even the CFP (8.61 Mg ha−1), although the corresponding yield differences were not significant (p < 0.05) in some cropping years. For soybean, the plots with P application produced an average of 0.98 Mg ha−1 greater annual yields than CK. No significant differences were found between CFP and manure treatments. The annual corn yield of SMN was close to that of the CK (7.19 Mg ha−1). The grain P removal (GPR) of SMN (18.6 kg ha−1) for soybean was significantly higher than that of the other treatments. The above-ground-P uptake (AGPU) in SMN, for both corn and soybean, was significantly higher than that of the other five treatments. The soil test P (STP) presented clear stratification, concentrating in the top 30 cm soil depth after 10 years of application. The contents of STP with LMN and SMN increased from 7.1 mg P kg−1 to 12.4 and 45.5 mg P kg−1, respectively. The sum of STP mass (0–30 cm) with LMP (31.6 kg ha−1) was largely identical to that with CFP (30.1 kg ha−1); however, with SMN (173.7 kg ha−1), it was significantly higher than the rest of the treatments. Manure P source availability coefficients were averaged at 1.06 and 1.07 for LMP and SMP, respectively. The addition of phosphorus-based liquid or solid swine manure can overcome the drawback of traditional N-based applications by potentially reducing the adverse impact on water quality while sustaining crop agronomic production.

Reliable estimates of the total forest carbon (C) pool are lacking due to insufficient information on dead organic matter (DOM). Here, the authors estimate that the current DOM C stock in China is 925 ± 54 Tg and that it grew by 6.7 ± 2.2 Tg C/yr over the past two decades primarily due to increasing forest area

Abstract Glomalin-related soil protein (GRSP) is known as an important microbial by-product which is crucial for preserving or accumulating soil organic carbon (SOC). However, the underlying mechanisms are not well understood. In this study, we investigated the chemical structures of GRSP and its relationship with SOC using 13C nuclear magnetic resonance (NMR) in three tropical forests. The three forests, including a planted forest (PF), a secondary forest (MF) and a primary forest (BF), were selected to represent the natural successional process after disturbance in southern China. Results showed that the average concentrations of GRSP were (3.94 ± 1.09) mg cm−3 and accounting for (3.38 ± 1.15)% of the SOC in the top 10 cm soil. NMR analysis indicated rich aromatic C (~30%) and carboxyl C (~40%) in GRSP, and abundant alkyl C (~30%) and O-alkyl C (~50%) in SOC. The recalcitrance indexes (RI), as defined as the ratio of sum of alkyl C and aromatic C over sum of O-alkyl C and carboxyl C, was (98.6 ± 18.9)%, (145.5 ± 10.9)% and (20.7 ± 0.3)% in GRSP higher than that in SOC in the PF, MF and BF, respectively. This study demonstrated that the stubborn structure of GRSP probably regulate the resistance of SOC sequestration in tropical forests, especially in the planted and secondary forests.

Organic amendments from animal production are commonly used for promoting soil fertility, and their impacts on the residual soil organic carbon (SOC) are of both agricultural and environmental interest. Iron (Fe) in the form of (oxyhydr)oxides has been proposed to play a critical role in long-term SOC preservation by forming Fe-organic associations, though currently a comprehensive understanding of how these Fe-organic associations are regulated by long-term organic amendments is limited. Here, we synthesize information to link Fe (oxyhydr)oxides, SOC sequestration, and long-term organic inputs from both field and laboratory studies. The results show that vigorous Fe mobilization can be regulated by long-term application of organic amendments, and these organically amended soils contained significantly higher concentrations of poorly crystalline Fe that was closely related to SOC storage in both upland and paddy soils. Potential mechanisms are proposed as follows: (1) DOM from the organically amended soils is more likely to co-precipitate with poorly crystalline Fe, and DOM from the inorganically fertilized soils is to a larger extent adsorbed on poorly crystalline Fe. The co-precipitated Fe-OM complexes are more resistant to desorption than the adsorbed OM. (2) DOM extracts from soils treated with organic amendments exhibit a stronger inhibitory effect on the crystallization of poorly crystalline Fe than DOM from inorganically fertilized soils, which may be the consequence of increased numbers of aromatic functional groups. Organic acids in root exudates increased soil mineral availability and the formation of poorly crystalline minerals. Compared to inorganic fertilizers, organic amendments significantly increase (>20%, p < 0.05) the concentration of poorly crystalline minerals in the presence of actual roots. (3) Microbially mediated Fe cycling is strongly linked to the Fe mineralogy in soils, and regulated by long-term organic amendments. Greater consumption of poorly crystalline Fe was observed in inorganically fertilized soil than that in organically amended soil, due to a higher relative abundance of well-known Fe(III) reducers. Conversely, Fe(II) oxidizers, were more abundant, and produced higher levels of poorly crystalline Fe under organic amendments. In conclusion, continuous organic amendments initialize a positive feedback loop for the maintenance of poorly crystalline Fe in soils, which can contribute to enhanced SOC storage.

The concurrent effect of elevated CO2 (eCO2) concentrations and arbuscular mycorrhizal fungi (AMF) on plant growth, carbon (C), nitrogen (N), phosphorus (P) and potassium (K) accumulations in plant and soil is largely unknown. To understand the mechanisms of eCO2 and mycorrhization on wheat (Triticum aestivum) performance and soil fertility, wheat seedlings were grown under four different CO2 environments for 12 weeks, including (1) ambient CO2 (ACO2, 410/460 ppm, daytime/nighttime), (2) sole daytime eCO2 (DeCO2, 550/460 ppm), (3) sole nighttime eCO2 (NeCO2, 410/610 ppm), and (4) dual or continuous daytime/nighttime eCO2 ((D + N)eCO2, 550/610 ppm), and with or without AMF (Funneliformis mosseae) colonization. DeCO2, NeCO2 and (D + N)eCO2 generally significantly increased shoot and root biomass, plant C, N, P and K accumulation, soil invertase and urease activity, but decreased shoot and root N, P and K concentrations, and soil available N, P and K. Compared with non-AMF, AMF effects on above-mentioned characteristics were significantly positive under ACO2, DeCO2 and (D + N)eCO2, but negative on plant biomass, C, N, P and K accumulation under NeCO2. Overall, AMF colonization alleviated soil nutrient constraints on plant responses to DeCO2, while NeCO2 decreased AMF’s beneficial effects on plants. These results demonstrated that an integration of AMF’s benefits to plants under factual field DeCO2 and/or NeCO2 will be critical for managing the long-term consequence of future CO2 rising on global cropping systems.

Effects of arbuscular mycorrhizal fungi (AMF), elevated carbon dioxide (eCO2), and their interaction on nutrient accumulation of leguminous plants and soil fertility is unknown. Plant growth, concentrations of tissue nitrogen (N), phosphorus (P), and potassium (K) in 12-week-old nodulated faba bean (Vicia faba, inoculated with Rhizobium leguminosarum bv. NM353), and nutrient use efficiency were thus assessed under ambient CO2 (410/460 ppm, daytime, 07:00 a.m.–19:00 p.m./nighttime, 19:00 p.m.–07:00 a.m.) and eCO2 (550/610 ppm) for 12 weeks with or without AM fungus of Funneliformis mosseae inoculation. eCO2 favored AMF root colonization and nodule biomass production. eCO2 significantly decreased shoot N, P and K concentrations, but generally increased tissue N, P and K accumulation and their use efficiency with an increased biomass production. Meanwhile, eCO2 enhanced C allocation into soil but showed no effects on soil available N, P, and K, while AM symbiosis increased accumulation of C, N, P, and K in both plant and soil though increased soil nutrient uptake under eCO2. Moreover, plant acquisition of soil NO3−–N and NH4+–N respond differently to AMF and eCO2 treatments. As a result, the interaction between AM symbiosis and eCO2 did improve plant C accumulation and soil N, P, and K uptake, and an alternative fertilization for legume plantation should be therefore taken under upcoming atmosphere CO2 rising. Future eCO2 studies should employ multiple AMF species, with other beneficial fungal or bacterial species, to test their interactive effects on plant performance and soil nutrient availability in the field, under other global change events including warming and drought.

For years, China has adopted environmental regulations in developing ports to improve their sustainability. Based on the data of Chinese ports from 2009 to 2018, this paper presents a data envelopment analysis model with subdividing input-output indicator weights and develops it further in two stages with the weight preference and the slacks-based measure, respectively. After assessing the sustainable development capability (SDC) of Chinese ports and their spatial correlation, it revealed that Chinese ports are clustered in several regions and their SDC has spilled over into their neighbors. Further study revealed the SDC is affected by environmental regulations in different ways: as a key measure among regulations to improve the SDC, voluntary regulation has a spatial spillover effect, but neither the mandatory regulation nor public media regulation can significantly improve the SDC. This suggests that the port authority should enact environmental regulations based on the port spatial difference and the port should expand its operation scale and market size and recruit more top talent, which is good for improving its productivity and reducing its carbon emissions.

New shoots (including newly formed leaves and twigs) and fruits of citrus tree are key organs for present yield formation and flower differentiation in the next season, but the relationship between yield fluctuation and accumulations of major nutrients in new shoots and fruits of citrus tree is still unclear. Thus, to quantify the biomass and mineral nutrient accumulation in new shoots and fruits of citrus trees under varied yield levels has essential significance for rational fertilization and pruning management for citrus orchards. The purpose of this study was, therefore, to investigate the accumulation of nitrogen (N), phosphorus (P), potassium (K), calcium (Ca) and magnesium (Mg), and the distribution of biomass in new shoots and fruits of citrus trees under low, medium and high-yield levels in each of eight orchards located in Chongqing, China. The results showed that substantial variation of fruit yield was observed in all eight orchards with an average yield of 15.0 (low), 30.9 (medium) and 60.1 (high) kg/plant. The averaged biomass of new shoots ranged from 1.59 to 2.51 kg/plant, which was significantly and positively correlated with fruit yield. Nutrient accumulation in leaves was generally highest among new organs, while more than half of N (52.70–71.4%), P (66.5–80.4%) and K (68.9–85.9%) accumulated in fruit. Fruit yields closely correlated with total amounts of major nutrients in new shoots. Furthermore, the nutrient requirements per unit of newly developed shoots and fruits were gradually decreased with increased yield, but the removed nutrients per ton of fresh fruit were almost stable, indicating that more nutrients were distributed into fruit tissues. Taken together, these findings are valuable for optimizing nutrient and pruning management in citrus orchards in China and other similar countries.

Few studies have examined if perennial leguminous cover crops are able to transfer nitrogen (N) via common mycorrhizal networks (CMNs) to neighboring fruit trees; the gradient of such N transfer could affect the N nutrition of both plants. Using separated three-column chambers to grow plants in a greenhouse, 99 atom% 15N as (15NH4)2SO4 was applied to leaves of white clover (Trifolium repens L.) and 15N was then traced in neighboring citrus (Citrus sinensis (L.) Osbeck) seedlings interconnected by an arbuscular mycorrhizal fungus (AMF, Rhizophagus intraradices). A range of 66.85–68.74% mycorrhizal colonization in white clover (mycorrhizal and/or Rhizobium trifolii inoculated) and 19.29–23.41% in citrus (non-mycorrhizal inoculated) was observed after 12 months of AMF inoculation in the white clover, indicating a successful CMN linkage was established between these two plant species. This CMN establishment resulted in significant increases in biomass, N accumulation, and 15N content of citrus when accompanied with nodulated and mycorrhizal fungus colonized white clover. N transfer from white clover to citrus was significantly greater under nodulation plus mycorrhization (46.23 mg N per pot, 1.71% of N transferred) than under non-inoculated control (4.36 mg N per pot, 0.21% of N transferred), and higher than sole mycorrhization (36.34 mg N per pot, 1.42% of N transferred). The percentage of N in citrus derived from white clover under nodulated/mycorrhization was 1.83–1.93%, and was highest in leaves (3.31%), moderate in stems (2.47%), and lowest in roots (0.41%) of citrus. In summary, results from this experiment demonstrated that nearly 2.0% of N transferred from white clover to citrus via CMN. Further studies are needed to quantify N transfer between white clover and citrus by other routes, including soil or root exudation pathways.

Estimating balanced nutrient requirements for a watermelon plantation is essential to increase its fruit yield and nutrient use efficiency. This is vital for China, which produces 60% of world’s watermelons with excessive fertilizer application. Therefore, datasets between 2000 and 2019 from field experiments in major watermelon producing regions across China were collected to assess relationships between fruit yield and nutrient uptake, and to estimate nitrogen (N), phosphorus (P), and potassium (K) requirements for a target yield using a modified Quantitative Evaluation of the Fertility of Tropical Soils (QUEFTS) model. The results showed that the QUEFTS model predicted a linear increase in fruit yield to 60–70% of the total potential yield when balanced amounts of N, P, and K nutrients were absorbed. To produce 1000 kg of watermelon, 2.11 kg N, 0.27 kg P, and 2.69 kg K were required in shoot, and the corresponding internal efficiencies (IE) were 475, 3682, and 372 kg fruit per kg of N, P, and K, respectively. The modified QUEFTS model also simulated a balanced N, P, and K removal by fruit (accounting for 50.9%, 58.2%, and 66.4% of these nutrient accumulations in shoots, respectively). Field validation experiments further verified that the modified QUEFTS model could be used for estimating balanced nutrient requirements. Results from this study can provide practical guidance on fertilizer recommendations for improving fruit yield while preventing excessive or deficient nutrient supplies in China’s watermelon plantations.