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Label scarcity problem is the main challenge that hinders the wide application of deep learning systems in automatic cardiovascular diseases (CVDs) detection using electrocardiography (ECG). Tuning pre-trained models alleviates this problem by transferring knowledge learned from large datasets to downstream small datasets. However, bottlenecks in computational efficiency and CVDs detection performance limit its clinical applications. It is difficult to improve the detection performance without significantly sacrificing model computational efficiency. Here, we propose a computation-efficient semi-supervised learning paradigm (FastECG) for robust and computation-efficient CVDs detection using ECG. It enables a robust adaptation of pre-trained models on downstream datasets with limited supervision and high computational efficiency. First, a random-deactivation technique is developed to achieve robust and fast low-rank adaptation of pre-trained weights. Subsequently, we propose a one-shot rank allocation module to determine the optimal ranks for the update matrices of the pre-trained weights. Finally, a lightweight semi-supervised learning pipeline is introduced to enhance model performance by leveraging labeled and unlabeled data with high computational efficiency. Extensive experiments on four downstream ECG datasets demonstrate that FastECG not only outperforms the state-of-the-art methods in multi-label CVDs detection but also consumes fewer GPU footprints, training time, and parameter storage space. As such, this paradigm provides an effective solution for achieving high computational efficiency and robust detection performance in the clinical applications of pre-trained models under limited supervision.

Recent advancements in Retrieval-Augmented Generation have significantly enhanced code completion at the repository level. Various RAG-based code completion systems are proposed based on different design choices. For instance, gaining more effectiveness at the cost of repeating the retrieval-generation process multiple times. However, the indiscriminate use of retrieval in current methods reveals issues in both efficiency and effectiveness, as a considerable portion of retrievals are unnecessary and may introduce unhelpful or even harmful suggestions to code language models. To address these challenges, we introduce CARD, a lightweight critique method designed to provide insights into the necessity of retrievals and select the optimal answer from multiple predictions. CARD can seamlessly integrate into any RAG-based code completion system. Our evaluation shows that CARD saves 21% to 46% times of retrieval for Line completion, 14% to 40% times of retrieval for API completion, and 6% to 46.5% times of retrieval for function completion respectively, while improving the accuracy. CARD reduces latency ranging from 16% to 83%. CARD is generalizable to different LMs, retrievers, and programming languages. It is lightweight with training in few seconds and inference in few milliseconds.

Several open-source systems, such as Flower and NVIDIA FLARE, have been developed in recent years while focusing on different aspects of federated learning (FL). Flower is dedicated to implementing a cohesive approach to FL, analytics, and evaluation. Over time, Flower has cultivated extensive strategies and algorithms tailored for FL application development, fostering a vibrant FL community in research and industry. Conversely, FLARE has prioritized the creation of an enterprise-ready, resilient runtime environment explicitly designed for FL applications in production environments. In this paper, we describe our initial integration of both frameworks and show how they can work together to supercharge the FL ecosystem as a whole. Through the seamless integration of Flower and FLARE, applications crafted within the Flower framework can effortlessly operate within the FLARE runtime environment without necessitating any modifications. This initial integration streamlines the process, eliminating complexities and ensuring smooth interoperability between the two platforms, thus enhancing the overall efficiency and accessibility of FL applications.

In the ever-evolving landscape of artificial intelligence (AI) and large language models (LLMs), handling and leveraging data effectively has become a critical challenge. Most state-of-the-art machine learning algorithms are data-centric. However, as the lifeblood of model performance, necessary data cannot always be centralized due to various factors such as privacy, regulation, geopolitics, copyright issues, and the sheer effort required to move vast datasets. In this paper, we explore how federated learning enabled by NVIDIA FLARE can address these challenges with easy and scalable integration capabilities, enabling parameter-efficient and full supervised fine-tuning of LLMs for natural language processing and biopharmaceutical applications to enhance their accuracy and robustness.

Electrocardiography (ECG) is a non-invasive tool for predicting cardiovascular diseases (CVDs). Current ECG-based diagnosis systems show promising performance owing to the rapid development of deep learning techniques. However, the label scarcity problem, the co-occurrence of multiple CVDs and the poor performance on unseen datasets greatly hinder the widespread application of deep learning-based models. Addressing them in a unified framework remains a significant challenge. To this end, we propose a multi-label semi-supervised model (ECGMatch) to recognize multiple CVDs simultaneously with limited supervision. In the ECGMatch, an ECGAugment module is developed for weak and strong ECG data augmentation, which generates diverse samples for model training. Subsequently, a hyperparameter-efficient framework with neighbor agreement modeling and knowledge distillation is designed for pseudo-label generation and refinement, which mitigates the label scarcity problem. Finally, a label correlation alignment module is proposed to capture the co-occurrence information of different CVDs within labeled samples and propagate this information to unlabeled samples. Extensive experiments on four datasets and three protocols demonstrate the effectiveness and stability of the proposed model, especially on unseen datasets. As such, this model can pave the way for diagnostic systems that achieve robust performance on multi-label CVDs prediction with limited supervision.

Modern hierarchical vision transformers have added several vision-specific components in the pursuit of supervised classification performance. While these components lead to effective accuracies and attractive FLOP counts, the added complexity actually makes these transformers slower than their vanilla ViT counterparts. In this paper, we argue that this additional bulk is unnecessary. By pretraining with a strong visual pretext task (MAE), we can strip out all the bells-and-whistles from a state-of-the-art multi-stage vision transformer without losing accuracy. In the process, we create Hiera, an extremely simple hierarchical vision transformer that is more accurate than previous models while being significantly faster both at inference and during training. We evaluate Hiera on a variety of tasks for image and video recognition. Our code and models are available at https://github.com/facebookresearch/hiera., Comment: ICML 2023 Oral version. Code+Models: https://github.com/facebookresearch/hiera

Electroencephalography (EEG) is an objective tool for emotion recognition and shows promising performance. However, the label scarcity problem is a main challenge in this field, which limits the wide application of EEG-based emotion recognition. In this paper, we propose a novel semi-supervised learning framework (EEGMatch) to leverage both labeled and unlabeled EEG data. First, an EEG-Mixup based data augmentation method is developed to generate more valid samples for model learning. Second, a semi-supervised two-step pairwise learning method is proposed to bridge prototype-wise and instance-wise pairwise learning, where the prototype-wise pairwise learning measures the global relationship between EEG data and the prototypical representation of each emotion class and the instance-wise pairwise learning captures the local intrinsic relationship among EEG data. Third, a semi-supervised multi-domain adaptation is introduced to align the data representation among multiple domains (labeled source domain, unlabeled source domain, and target domain), where the distribution mismatch is alleviated. Extensive experiments are conducted on two benchmark databases (SEED and SEED-IV) under a cross-subject leave-one-subject-out cross-validation evaluation protocol. The results show the proposed EEGmatch performs better than the state-of-the-art methods under different incomplete label conditions (with 6.89% improvement on SEED and 1.44% improvement on SEED-IV), which demonstrates the effectiveness of the proposed EEGMatch in dealing with the label scarcity problem in emotion recognition using EEG signals. The source code is available at https://github.com/KAZABANA/EEGMatch.

Federated learning (FL) enables building robust and generalizable AI models by leveraging diverse datasets from multiple collaborators without centralizing the data. We created NVIDIA FLARE as an open-source software development kit (SDK) to make it easier for data scientists to use FL in their research and real-world applications. The SDK includes solutions for state-of-the-art FL algorithms and federated machine learning approaches, which facilitate building workflows for distributed learning across enterprises and enable platform developers to create a secure, privacy-preserving offering for multiparty collaboration utilizing homomorphic encryption or differential privacy. The SDK is a lightweight, flexible, and scalable Python package. It allows researchers to apply their data science workflows in any training libraries (PyTorch, TensorFlow, XGBoost, or even NumPy) in real-world FL settings. This paper introduces the key design principles of NVFlare and illustrates some use cases (e.g., COVID analysis) with customizable FL workflows that implement different privacy-preserving algorithms. Code is available at https://github.com/NVIDIA/NVFlare., Comment: Accepted at the International Workshop on Federated Learning, NeurIPS 2022, New Orleans, USA (https://federated-learning.org/fl-neurips-2022); Revised version v2: added Key Components list, system metrics for homomorphic encryption experiment; Extended v3 for journal submission

Single-view RGB-D human reconstruction with implicit functions is often formulated as per-point classification. Specifically, a set of 3D locations within the view-frustum of the camera are first projected independently onto the image and a corresponding feature is subsequently extracted for each 3D location. The feature of each 3D location is then used to classify independently whether the corresponding 3D point is inside or outside the observed object. This procedure leads to sub-optimal results because correlations between predictions for neighboring locations are only taken into account implicitly via the extracted features. For more accurate results we propose the occupancy planes (OPlanes) representation, which enables to formulate single-view RGB-D human reconstruction as occupancy prediction on planes which slice through the camera's view frustum. Such a representation provides more flexibility than voxel grids and enables to better leverage correlations than per-point classification. On the challenging S3D data we observe a simple classifier based on the OPlanes representation to yield compelling results, especially in difficult situations with partial occlusions due to other objects and partial visibility, which haven't been addressed by prior work., Comment: AAAI2023; Code: https://github.com/Xiaoming-Zhao/oplanes

Optimization within a layer of a deep-net has emerged as a new direction for deep-net layer design. However, there are two main challenges when applying these layers to computer vision tasks: (a) which optimization problem within a layer is useful?; (b) how to ensure that computation within a layer remains efficient? To study question (a), in this work, we propose total variation (TV) minimization as a layer for computer vision. Motivated by the success of total variation in image processing, we hypothesize that TV as a layer provides useful inductive bias for deep-nets too. We study this hypothesis on five computer vision tasks: image classification, weakly supervised object localization, edge-preserving smoothing, edge detection, and image denoising, improving over existing baselines. To achieve these results we had to address question (b): we developed a GPU-based projected-Newton method which is $37\times$ faster than existing solutions., Comment: CVPR 2022

Designing equivariance as an inductive bias into deep-nets has been a prominent approach to build effective models, e.g., a convolutional neural network incorporates translation equivariance. However, incorporating these inductive biases requires knowledge about the equivariance properties of the data, which may not be available, e.g., when encountering a new domain. To address this, we study how to discover interpretable equivariances from data. Specifically, we formulate this discovery process as an optimization problem over a model's parameter-sharing schemes. We propose to use the partition distance to empirically quantify the accuracy of the recovered equivariance. Also, we theoretically analyze the method for Gaussian data and provide a bound on the mean squared gap between the studied discovery scheme and the oracle scheme. Empirically, we show that the approach recovers known equivariances, such as permutations and shifts, on sum of numbers and spatially-invariant data., Comment: AISTATS 2022