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• The effects of shelling, plant hormones, explant position, infection parameters and other factors on the in vitro regeneration of luffa cotyledons were studied. • The ACS7 gene was successfully transferred into luffa by Agrobacterium-mediated transformation. • Establish an efficient in vitro regeneration system and lay a foundation for further research. To establish an efficient in vitro regeneration system and lay a foundation for further research, the effects of shelling, plant hormones, explant position, infection parameters and other factors on the in vitro regeneration of luffa cotyledons were studied. The results showed that the best medium for inducing adventitious buds from luffa cotyledons was Murashige and Skoog (MS) + Thidiazuron (TDZ) 0.3 mg· L −1+ Indole-3-Butyric acid (IBA) 0.02 mg· L −1+ AgNO 3 2 mg· L −1+ sucrose 3 %, and the induction rate reached 95.83 %. However, different cotyledon cutting methods resulted in different regeneration rates of adventitious buds. Using this regeneration system, the ACS7 gene was successfully transferred into luffa by Agrobacterium-mediated transformation. [ABSTRACT FROM AUTHOR]

Wild rocket downy mildew (DM), caused by oomycete Hyaloperonospora sp., is a widely spread disease reducing crop production and quality. New productive wild rocket varieties resistant to DM are crucial to control disease and ensure high quality leaves. A histological characterization of Hyaloperonospora sp. infection was performed in 11 wild rocket (Diplotaxis tenuifolia) accessions with contrasting DM responses (R, resistant; PR, partially resistant; S, susceptible). Samples of infected cotyledons, first and second leaves of 14‐day‐old seedlings were collected at 3, 6, 9, 21 and 24 h post‐inoculation (hpi) and 7 days post‐inoculation (dpi) and stained for appressoria and haustoria observation and tissue necrosis evaluation. Occurrence of appressoria on host surfaces was higher in leaves compared with cotyledons but unrelated with DM resistance response. Haustoria growth in mycelium was delayed in R accessions from 3 hpi, and signs of cell hypersensitivity reaction were observed at 9 hpi. At 24 hpi, necrotic spots limited pathogen growth in resistant accessions, whilst mycelium invaded larger mesophyll areas and produced more haustoria in susceptible ones. At 7 dpi, sporulation was heavy in S, restricted to droplet deposition sites in PR, and did not occur in R hosts. A rapid response of R accessions resulted in slower mycelium growth and longer infection periods. These traits have important agronomic value and should be considered in germplasm selection for breeding programmes aimed at crop protection. A better understanding of the host response to DM infection will allow selection of more suitable wild rocket accessions in future breeding programmes. [ABSTRACT FROM AUTHOR]

Background: Aneuploidy in plants commonly presents as large variations in morphology, physiology, biochemistry, and genetic effects owing to its karyotypic imbalance. Results: In this study, the trait variations of 393 offspring obtained by pollinating Populus alla × Populus glandulosa 'YXY 7' (2n = 2x = 38) with Populus 'Beilinxiongzhu 1#' (2n = 3x = 57) were explored. The results showed several morphological variations in the cotyledons, including two (69.68%), three (24.07%), and four cotyledons (6.25%). Additionally, the progeny exhibited extensive segregation of ploidy levels, ranging from 38 to 74. Furthermore, seedlings with different chromosome numbers varied in growth traits and physiological activities during growth and development. The backcross progeny with 51–60 chromosomes had a significantly larger basal diameter and seedling height than those with other chromosome numbers. The phenotypic correlations between the traits indicated that the dose effect of the chromosomes significantly affected the basal diameter, petiole length, and leaf length, particularly with stomatal length and stomatal density. Weak and negative estimated correlations were observed between the physiological traits associated with photosynthesis and most of the studied traits. Conclusions: This study provides new genetic material with different chromosome compositions, which will contribute to analyzing chromosomal function and integrate the variations in chromosomal dosage into Populus breeding programs. [ABSTRACT FROM AUTHOR]

It has been proposed that cortical fine actin filaments are needed for the morphogenesis of pavement cells (PCs). However, the precise role and regulation mechanisms of actin filaments in PC morphogenesis are not well understood. Here, we found that Arabidopsis thaliana ACTIN DEPOLYMERIZING FACTOR9 (ADF9) is required for the morphogenesis of PC, which is negatively regulated by the R2R3 MYELOBLASTOSIS (MYB) transcription factor MYB52. In adf9 mutants, the lobe number of cotyledon PCs was significantly reduced, while the average lobe length did not differ significantly compared to that of wild type (Col‐0), except for the variations in cell area and circularity, whereas the PC shapes in ADF9 overexpression seedlings showed different results. ADF9 decorated actin filaments, and colocalized with plasma membrane. The extent of filament bundling and actin filament bundling activity in adf9 mutant decreased. In addition, MYB52 directly targeted the promoter of ADF9 and negatively regulated its expression. The myb52‐2 mutant showed increased lobe number and cell area, reduced cell circularity of PCs, and the PC phenotypes were suppressed when ADF9 was knocked out. Taken together, our data demonstrate that actin filaments play an important role in the morphogenesis of PC and reveal a transcriptional mechanism underlying MYB52 regulation of ADF9‐mediated actin filament bundling in PC morphogenesis. [ABSTRACT FROM AUTHOR]

Germin-like proteins (GLPs) play important roles in the regulation of various plant development processes, such as seed vigor, root and leaf development and disease resistance, while the roles of GLPs on agronomic traits are rarely studied in Brassica napus. Here, we identified GLPs family genes in rapeseed and analyzed their potential functions. There are 77 GLPs family genes (BnGLPs) in the Zhongshuang11 rapeseed reference genome, divided into a, b, c, d, e, f six subfamilies. Tissue expression profile analysis of BnGLPs revealed the following: e subfamily genes were highly expressed in early stages of silique, cotyledon, vegetative rosette and leaf development; f subfamily genes were highly expressed in seed development; genes of a subfamily were mainly expressed in the root; and genes of b, c, d subfamily exhibited low-level or no expression in above mentioned tissues. RT-qPCR analysis confirmed that the transcripts of two f subfamily members decreased dramatically during seed germination, suggesting that f subfamily proteins may play vital roles in the early stage of seed germination. Transcriptome analysis of axillary buds in sequential developing stages revealed that the transcripts of eight e subfamily genes showed a rapid increase at the beginning of shoot branching, implying that the e subfamily members played vital roles in branch development. These results demonstrate that rapeseed BnGLPs likely play essential roles in seedling development, root development and plant architecture, indicating that harnessing certain BnGLPs may contribute to the improvement of rapeseed yield. [ABSTRACT FROM AUTHOR]

Plant domestication often alters plant traits, including chemical and physical defenses against herbivores. In squash, domestication leads to reduced levels of cucurbitacins and leaf trichomes, influencing interactions with insects. However, the impact of domestication on inducible defenses in squash remains poorly understood. Here, we investigated the chemical and physical defensive traits of wild and domesticated squash (Cucurbita argyrosperma), and compared their responses to belowground and aboveground infestation by the root-feeding larvae and the leaf-chewing adults of the banded cucumber beetle Diabrotica balteata (Coleoptera: Chrysomelidae). Wild populations contained cucurbitacins in roots and cotyledons but not in leaves, whereas domesticated varieties lacked cucurbitacins in all tissues. Belowground infestation by D. balteata larvae did not increase cucurbitacin levels in the roots but triggered the expression of cucurbitacin biosynthetic genes, irrespective of domestication status, although the response varied among different varieties. Conversely, whereas wild squash had more leaf trichomes than domesticated varieties, the induction of leaf trichomes in response to herbivory was greater in domesticated plants. Leaf herbivory varied among varieties but there was a trend of higher leaf damage on wild squash than domesticated varieties. Overall, squash plants responded to both belowground and aboveground herbivory by activating chemical defense-associated gene expression in roots and upregulating their physical defense in leaves, respectively. While domestication suppressed both chemical and physical defenses, our findings suggest that it may enhance inducible defense mechanisms by increasing trichome induction in response to herbivory. [ABSTRACT FROM AUTHOR]

Summary: Branch length is an important plant architecture trait in cotton (Gossypium) breeding. Development of cultivars with short branch has been proposed as a main object to enhance cotton yield potential, because they are suitable for high planting density. Here, we report the molecular cloning and characterization of a semi‐dominant quantitative trait locus, Short Branch Internode 1(GhSBI1), which encodes a NAC transcription factor homologous to CUP‐SHAPED COTYLEDON 2 (CUC2) and is regulated by microRNA ghr‐miR164. We demonstrate that a point mutation found in sbi1 mutants perturbs ghr‐miR164‐directed regulation of GhSBI1, resulting in an increased expression level of GhSBI1. The sbi1 mutant was sensitive to exogenous gibberellic acid (GA) treatments. Overexpression of GhSBI1 inhibited branch internode elongation and led to the decreased levels of bioactive GAs. In addition, gene knockout analysis showed that GhSBI1 is required for the maintenance of the boundaries of multiple tissues in cotton. Transcriptome analysis revealed that overexpression of GhSBI1 affects the expression of plant hormone signalling‐, axillary meristems initiation‐, and abiotic stress response‐related genes. GhSBI1 interacted with GAIs, the DELLA repressors of GA signalling. GhSBI1 represses expression of GA signalling‐ and cell elongation‐related genes by directly targeting their promoters. Our work thus provides new insights into the molecular mechanisms for branch length and paves the way for the development of elite cultivars with suitable plant architecture in cotton. [ABSTRACT FROM AUTHOR]

Stomata regulate CO2 and water vapor exchange between leaves and the atmosphere, serving as a vital indicator of climate change resilience. Therefore, understanding the difference in stomatal numbers and patterns among different soybean cultivars across growth stages is essential to comprehending the complex mechanisms underlying soybean adaptation to climate change. The accurate measurements of stomatal density in soybean leaves are essential to understanding the complexity of stomatal density by environmental conditions. We demonstrated that the five epidermal sections and five microscopic images taken from both sides of each epidermal section at each leaf position (tip, middle, and bottom) were sufficient for stomatal measurements. Furthermore, we investigated variations in stomatal density among leaflet locations (left, right, and central) and leaf position across different growth stages. Notably, while there was no significant variation between the two leaves of the vegetative cotyledon (VC) stage and among the three leaflets of the V1 (first trifoliate) to V4 (fourth trifoliate) growth stages, leaves of the VC stage exhibited the lowest stomatal density, whereas those of the V4 stage exhibited the highest stomatal density. These findings could serve as a valuable tool for evaluating stomatal density, analyzing physiological differences under adverse climatic conditions, and phenotyping a large-scale population to identify the genetic factors responsible for stomatal density variations in soybean genotypes. [ABSTRACT FROM AUTHOR]

In addition to leaves, photosynthesis can occur in other green plant organs, including developing seeds of many crops. While the majority of studies examining photosynthesis are concentrated on the leaf level, the role of other green tissues in the production of total photoassimilates has been largely overlooked. The present work studies the photosynthetic behavior of leaves and non-foliar (pericarps, coats, and cotyledons) organs of pea (Pisum sativum L.) plants at the middle stage of seed maturation. The Chl a fluorescence transient was examined based on OJIP kinetics using the FluorPen FP 110. A discrepancy was observed between the performance index (PIABS) for foliar and non-foliar plant tissues, with the highest level noted in the leaves. The number of absorbed photons (ABS) and captured energy flow (TRo) per reaction center (RC) were elevated in the non-foliar tissues, which resulted in a faster reduction in QA. Conversely, the energy dissipation flux per RC (DIo/RC and PHI_Do) indicated an increase in the overall dissipation potential of active reaction centers of photosystem II. This phenomenon was attributed to the presence of a higher number of inactive RCs in tissues that had developed under low light intensity. Furthermore, the expression of genes associated with proteins and enzymes that regulate ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCo) activity was observed, including chaperonins Cpn60α and Cpn60β, RuBisCO activase, as well as phosphoribulokinase. The expression of these genes was found to differ between foliar and non-foliar tissues, indicating that the activation state of RuBisCO may be modified in response to light intensity. Overall, the present study provides insights into the mechanisms by which non-foliar green tissues of plants adapt to efficient light capture and utilization under low light conditions. [ABSTRACT FROM AUTHOR]

Seed water imbibition is critical to seedling establishment in tropical forests. The seeds of the neotropical tree Hymenaea courbaril have no oil reserves and have been used as a model to study storage cell wall polysaccharide (xyloglucan – XyG) mobilization.We studied pathways of water imbibition in Hymenaea seeds. To understand seed features, we performed carbohydrate analysis and scanning electron microscopy. We found that the seed coat comprises a palisade of lignified cells, below which are several cell layers with cell walls rich in pectin. The cotyledons are composed mainly of storage XyG. From a single point of scarification on the seed surface, we followed water imbibition pathways in the entire seed using fluorescent dye and NMRi spectroscopy. We constructed composites of cellulose with Hymenaea pectin or XyG. In vitro experiments demonstrated cell wall polymer capacity to imbibe water, with XyG imbibition much slower than the pectin‐rich layer of the seed coat.We found that water rapidly crosses the lignified layer and reaches the pectin‐rich palisade layer so that water rapidly surrounds the whole seed. Water travels very slowly in cotyledons (most of the seed mass) because it is imbibed in the XyG‐rich storage walls. However, there are channels among the cotyledon cells through which water travels rapidly, so the primary cell walls containing pectins will retain water around each storage cell.The different seed tissue dynamic interactions between water and wall polysaccharides (pectins and XyG) are essential to determining water distribution and preparing the seed for germination. [ABSTRACT FROM AUTHOR]

Summary: The length of hypocotyl affects the height of soybean and lodging resistance, thus determining the final grain yield. However, research on soybean hypocotyl length is scarce, and the regulatory mechanisms are not fully understood. Here, we identified a module controlling the transport of sucrose, where sucrose acts as a messenger moved from cotyledon to hypocotyl, regulating hypocotyl elongation. This module comprises four key genes, namely MYB33, SWEET11, SWEET21 and GA2ox8c in soybean. In cotyledon, MYB33 is responsive to sucrose and promotes the expression of SWEET11 and SWEET21, thereby facilitating sucrose transport from the cotyledon to the hypocotyl. Subsequently, sucrose transported from the cotyledon up‐regulates the expression of GA2ox8c in the hypocotyl, which ultimately affects the length of the hypocotyl. During the domestication and improvement of soybean, an allele of MYB33 with enhanced abilities to promote SWEET11 and SWEET21 has gradually become enriched in landraces and cultivated varieties, SWEET11 and SWEET21 exhibit high conservation and have undergone a strong purified selection and GA2ox8c is under a strong artificial selection. Our findings identify a new molecular pathway in controlling soybean hypocotyl elongation and provide new insights into the molecular mechanism of sugar transport in soybean. [ABSTRACT FROM AUTHOR]

Copyright of Environmental & Social Management Journal / Revista de Gestão Social e Ambiental is the property of Environmental & Social Management Journal and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Cotyledons play an important role in early seedling establishment. However, relative to primary leaves, cotyledons tend to have a different investment-on-return strategy. To detect the potential differences in the mass (M) versus area (A) scaling relationships between cotyledons and primary leaves in different light environments, a total of 75 Acer platanoides seedlings were sampled at an open site (n  = 52; light availability: 74 ± 5 %) and a shaded site (n  = 23; light availability: 4.2 ± 1.2 %). Reduced major axis regression protocols were used to fit the M versus A scaling relationships of primary leaves and cotyledons. The bootstrap percentile method was used to test the significance of the differences in the scaling exponents of M versus A between the two light environments. The scaling exponents of cotyledons at both two sites, as well as the primary leaves at the shade site, were greater than unity indicating 'diminishing returns', while the scaling exponent of primary leaves at the open site was smaller than unity indicating 'increasing returns'. The data collectively indicated light-dependent shifts in support investments and differences in the function of cotyledons and primary leaves. Average leaf structural traits displayed significant differences between the two light environments in accordance with the premium in enhancing photosynthetic capacity in high light and light interception in low light. Although the trait responses to light availability were similar for primary leaves and cotyledons, primary leaves were more responsive to light availability, indicating lower plasticity of cotyledons in response to light levels. These results advance our understanding of the roles of cotyledons and primary leaves in the life history of seedlings in different forest light environments. [ABSTRACT FROM AUTHOR]

Pine stands affected by root and butt rot (Heterobasidion annosum s.l.) contain pines (Pinus sylvestris L.) that can survive for a long time without showing external symptoms of the disease ('conditionally resistant' refers to trees that survive without symptoms despite infection). The establishment of stands from the seeds of such trees can significantly increase the effectiveness of artificial afforestation. Since the growth and development of pine trees is determined to a certain extent by the number of cotyledons after seed germination, this article examines this trait in the progeny of trees that are potentially resistant and those that have already been attacked by root pathogens. The number of cotyledons and the resilience of trees is fascinating and not generally known. Presumably, the number of cotyledons can be linked to disease resistance based on increased vigour. Biologically, a larger area for carbon assimilation leads to better photosynthetic efficiency and the production of more assimilates (sugars) necessary to trigger defence processes in the event of infection. From an ecological point of view, this can give tree populations in areas potentially threatened by root system diseases a chance of survival. The aim of this study was to analyze the potential of using the number of cotyledons and other seedling characteristics to predict the resistance of trees to root and butt rot disease. The collected data show that the seedlings from the group of diseased trees exhibited lower growth rates and vigour. However, the seedlings from the group of potentially resistant trees are similar to the control, meaning the trees that show no disease symptoms because they have not come into contact with the pathogen. Our observations suggest that monitoring germinating cotyledons could serve as an early diagnostic tool to identify disease-resistant pines, although further research is needed. [ABSTRACT FROM AUTHOR]

We described the pathological findings of an abortion associated with Yersinia enterocolitica infection in an ewe. A late-gestation aborted ovine fetus and placenta were submitted for necropsy. Pathologic changes were restricted to the chorioallantois. Grossly, cotyledons and intercodilenary regions had areas of mild red discoloration, and cotyledons were covered with a small amount of fibrin. Histological lesions consisted of multifocal, severe necrotizing and fibrinosuppurative placentitis with fibrinoid vasculitis and mineralization. Bacterial culture of lung, abomasum, and placenta samples yielded pure growth of Y. enterocolitica. This report described the first case of infection by Yersinia enterocolitica causing ovine abortion in Brazil. [ABSTRACT FROM AUTHOR]

Pinus oocarpa is a widely distributed species essential for resin production in Mexico, where demand surpasses supply. This study aimed to identify differences and variation levels of seedling emergence capacity and morphological traits in resin-producing high-yield P. oocarpa trees and estimate their genetic control. Seeds from 72 open-pollinated families were planted using a randomized complete block experimental design. Differences between families were determined and pooled using cluster analysis. We recorded wide differences in seed emergence capacity and morphological traits (cotyledon number and length, and hypocotyl length), allowing to establish three family groups. We also calculated the contribution of the variation sources to the total variance and genetic parameters involved. Our data evidenced high genetic control for all tested variables. We found a moderate and positive genetic correlation between cotyledon length, cotyledon number, and hypocotyl length. We also found a high negative genetic correlation between emergence capacity and hypocotyl length. At the phenotypic level, we found a high and significant correlation between cotyledon length and number. Grouping P. oocarpa into families should aid decision-making for sexual propagation since a high propagation capacity of the high-yield trees is essential for genetic improvement programs. Moreover, we demonstrate that the heritability of the emergence capacity and other morphological traits is high; these traits can be useful for the early selection of high-yield families.

As a master regulator of seed development, Leafy Cotyledon 1 (LEC1) promotes chlorophyll (Chl) biosynthesis in Arabidopsis, but the mechanism underlying this remains poorly understood. Here, we found that loss of function of OsNF-YB7, a LEC1 homolog of rice, leads to chlorophyllous embryo, indicating that OsNF-YB7 plays an opposite role in Chl biosynthesis in rice compared with that in Arabidopsis. OsNF-YB7 regulates the expression of a group of genes responsible for Chl biosynthesis and photosynthesis by directly binding to their promoters. In addition, OsNF-YB7 interacts with Golden 2-Like 1 (OsGLK1) to inhibit the transactivation activity of OsGLK1, a key regulator of Chl biosynthesis. Moreover, OsNF-YB7 can directly repress OsGLK1 expression by recognizing its promoter in vivo, indicating the involvement of OsNF-YB7 in multiple regulatory layers of Chl biosynthesis in rice embryo. We propose that OsNF-YB7 functions as a transcriptional repressor to regulate Chl biosynthesis in rice embryo. [ABSTRACT FROM AUTHOR]

Seed coat morphology of 34 species of Matthiola R.Br. has been studied using light and scanning electron microscopy to assess their investigative value for systematic studies. Macro‐ and micromorphological characters, including seed shape, color, size, wing, and radicle position relative to cotyledons, epidermal cell shape, anticlinal boundaries, and periclinal cell wall are presented. Seed shape, color, and radicle position relative to cotyledons have limited taxonomic significance, as their variation is unhelpful. There against, seed size, wing, and seed coat ornamentation present informative characteristics that can be used professionally in distinguishing the studied taxa. Six different types of seed anticlinal cell wall boundaries are recognized and five different outer periclinal cell wall shapes are described. The sculpture of the secondary cell wall varies from striate, micropapillate to microreticulate, and smooth to fine folds. The taxonomic and phylogenetic implications of seed coat micromorphology were compared with those of the existing gross morphological and molecular data. Seed character analysis offered useful data for evaluating the taxonomy of Matthiola both on subgeneric and sectional levels. Seed micromorphological characters provide evidence that M. odoratissima and M. ovatifolia should be preserved as separate species. In addition, M. ghorana is not conspecific with M. graminea. Furthermore, M. tricuspidata was unique in the seed characters. A key to the identification of the examined taxa based on seed characters is provided. [ABSTRACT FROM AUTHOR]

‘Seum’ is a black-seed coated soybean cultivar developed from crossing ‘IT21785’ and ‘Wonkwang (IT218557)’ in 2010. F1 and F2 populations were grown for 2 years and promising lines were selected by pedigree method from F3 to F5. The preliminary yield trial (PYT) and advanced yield trial (AYT) were conducted from 2016 to 2017, and regional yield trial (RYT) in 7 regions was conducted from 2018 to 2020. ‘Seum’ is determinate, has a lanceolate leaflet shape, purple flowers, green cotyledons, and black spherical seeds. Flowering and maturing dates were Aug. 4 and Oct. 21, respectively. ‘Seum’ has small seed size (11.4 g/100-seed) and shorter plant height than that of ‘Socheongja’. ‘Seum’ was more tolerant to lodging and pod shattering in regional field and indoor trials than that of ‘Socheongja’. ‘Seum’ was resistant to bacterial pustule during field tests and to soybean mosaic virus (G6H strain) during inoculation tests. The mean yield of ‘Seum’ in RYT was 292 kg/10a which was higher than that of ‘Socheongja’. ‘Seum’ is expected to rapidly replace the elite variety ‘Socheongja’ based on its lodging tolerance and high yield potential (Registration No. 9449). [ABSTRACT FROM AUTHOR]

Although green light (GL) is located in the middle of the visible light spectrum and regulates a series of plant developmental processes, the mechanism by which it regulates seedling development is largely unknown. In this study, we demonstrated that GL promotes atypical photomorphogenesis in Arabidopsis thaliana via the dual regulations of phytochrome B (phyB) and phyA. Although the Pr‐to‐Pfr conversion rates of phyB and phyA under GL were lower than those under red light (RL) in a fluence rate‐dependent and time‐dependent manner, long‐term treatment with GL induced high Pfr/Pr ratios of phyB and phyA. Moreover, GL induced the formation of numerous small phyB photobodies in the nucleus, resulting in atypical photomorphogenesis, with smaller cotyledon opening angles and longer hypocotyls in seedlings compared to RL. The abundance of phyA significantly decreased after short‐ and long‐term GL treatments. We determined that four major PHYTOCHROME‐INTERACTING FACTORs (PIFs: PIF1, PIF3, PIF4, and PIF5) act downstream of phyB in GL‐mediated cotyledon opening. In addition, GL plays opposite roles in regulating different PIFs. For example, under continuous GL, the protein levels of all PIFs decreased, whereas the transcript levels of PIF4 and PIF5 strongly increased compared with dark treatment. Taken together, our work provides a detailed molecular framework for understanding the role of the antagonistic regulations of phyB and phyA in GL‐mediated atypical photomorphogenesis. [ABSTRACT FROM AUTHOR]

The embryogenic transition of plant somatic cells to produce somatic embryos requires extensive reprogramming of the cell transcriptome. The prominent role of transcription factors (TFs) and miRNAs in controlling somatic embryogenesis (SE) induction in plants was documented. The profiling of MIRNA expression in the embryogenic culture of Arabidopsis implied the contribution of the miR156 and miR169 to the embryogenic induction. In the present study, the function of miR156 and miR169 and the candidate targets, SPL and NF-YA genes, were investigated in Arabidopsis SE. The results showed that misexpression of MIRNA156 and candidate SPL target genes (SPL2, 3, 4, 5, 9, 10, 11, 13, 15) negatively affected the embryogenic potential of transgenic explants, suggesting that specific fine-tuning of the miR156 and target genes expression levels seems essential for efficient SE induction. The results revealed that SPL11 under the control of miR156 might contribute to SE induction by regulating the master regulators of SE, the LEC (LEAFY COTYLEDON) genes (LEC1, LEC2, FUS3). Moreover, the role of miR169 and its candidate NF-YA targets in SE induction was demonstrated. The results showed that several miR169 targets, including NF-YA1, 3, 5, 8, and 10, positively regulated SE. We found, that miR169 via NF-YA5 seems to modulate the expression of a master SE regulator LEC1/NF-YA and other auxin-related genes: YUCCA (YUC4, 10) and PIN1 in SE induction. The study provided new insights into miR156-SPL and miR169-NF-YA functions in the auxin-related and LEC-controlled regulatory network of SE. [ABSTRACT FROM AUTHOR]

SUMMARY: HSP90Cs are essential molecular chaperones localized in the plastid stroma that maintain protein homeostasis and assist the import and thylakoid transport of chloroplast proteins. While HSP90C contains all conserved domains as an HSP90 family protein, it also possesses a unique feature in its variable C‐terminal extension (CTE) region. This study elucidated the specific function of this HSP90C CTE region. Our phylogenetic analyses revealed that this intrinsically disordered region contains a highly conserved DPW motif in the green lineages. With biochemical assays, we showed that the CTE is required for the chaperone to effectively interact with client proteins PsbO1 and LHCB2 to regulate ATP‐independent chaperone activity and to effectuate its ATP hydrolysis. The CTE truncation mutants could support plant growth and development reminiscing the wild type under normal conditions except for a minor phenotype in cotyledon when expressed at a level comparable to wild type. However, higher HSP90C expression was observed to correlate with a stronger response to specific photosystem II inhibitor DCMU, and CTE truncations dampened the response. Additionally, when treated with lincomycin to inhibit chloroplast protein translation, CTE truncation mutants showed a delayed response to PsbO1 expression repression, suggesting its role in chloroplast retrograde signaling. Our study therefore provides insights into the mechanism of HSP90C in client protein binding and the regulation of green chloroplast maturation and function, especially under stress conditions. [ABSTRACT FROM AUTHOR]

Copyright of Journal of Northwest A & F University - Natural Science Edition is the property of Editorial Department of Journal of Northwest A&F University (Natural Science Edition) and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Alfin-like proteins (ALs) form a plant-specific transcription factor (TF) gene family involved in the regulation of plant growth and development, and abiotic stress response. In this study, 30 ALs were identified in Brassica napus ecotype 'Zhongshuang 11' genome (BnaALs), and unevenly distributed on 15 chromosomes. Structural characteristic analysis showed that all of the BnaALs contained two highly conserved domains: the N terminal DUF3594 domain and the C-terminal PHD-finger domain. The BnaALs were classified into four groups (Group I-IV), supported by conserved intron–exon and protein motif structures in each group. The allopolyploid event between B. oleracea and B. rapa ancestors and the small-scale duplication events in B. napus both contributed to the large BnaALs expansion. The promoter regions of BnaALs contained multiple abiotic stress cis-elements. The BnaALs in I-IV groups were mainly expressed in cotyledon, petal, root, silique, and seed tissues, and the duplicated gene pairs shared highly similar expression patterns. RNA-seq and RT-qPCR analysis showed that BnaALs were obviously induced by low nitrogen (LN) and low phosphorus (LP) treatments in roots. Overexpressing BnaAL02 and BnaAL28 in Arabidopsis demonstrated their functions in response to LN and LP stresses. BnaAL28 enhanced primary roots' (PRs) length and lateral roots' (LRs) number under LP and LN conditions, where BnaAL02 can inhibit LR numbers under the two conditions. They can promote root hair (RH) elongation under LP conditions; however, they suppressed RH elongation under LN conditions. Our result provides new insight into the functional dissection of this family in response to nutrient stresses in plants. [ABSTRACT FROM AUTHOR]

Background: Plant long non-coding RNAs (lncRNAs) have important regulatory roles in responses to various biotic and abiotic stresses, including light quality. However, no lncRNAs have been specifically linked to the Shade Avoidance Response (SAS). Results: To better understand the involvement of lncRNAs in shade avoidance, we examined RNA-seq libraries for lncRNAs with the potential to function in the neighbor proximity phenomenon in Arabidopsis thaliana (A. thaliana). Using transcriptomes generated from seedlings exposed to high and low red/far-red (R/FR) light conditions, we identified 13 lncRNA genes differentially expressed in cotyledons and 138 in hypocotyls. To infer possible functions for these lncRNAs, we used a 'guilt-by-association' approach to identify genes co-expressed with lncRNAs in a weighted gene co-expression network. Of 34 co-expression modules, 10 showed biological functions related to differential growth. We identified three potential lncRNAs co-regulated with genes related to SAS. T-DNA insertions in two of these lncRNAs were correlated with morphological differences in seedling responses to increased FR light, supporting our strategy for computational identification of lncRNAs involved in SAS. Conclusions: Using a computational approach, we identified multiple lncRNAs in Arabidopsis involved in SAS. T-DNA insertions caused altered phenotypes under low R/FR light, suggesting functional roles in shade avoidance. Further experiments are needed to determine the specific mechanisms of these lncRNAs in SAS. [ABSTRACT FROM AUTHOR]

Summary: The homology of the single cotyledon of grasses and the ontogeny of the scutellum and coleoptile as the initial, highly modified structures of the grass embryo are investigated using leaf developmental genetics and targeted transcript analyses in the model grass Zea mays subsp. mays.Transcripts of leaf developmental genes are identified in both the initiating scutellum and the coleoptile, while mutations disrupting mediolateral leaf development also disrupt scutellum and coleoptile morphology, suggesting that these grass‐specific organs are modified leaves.Higher‐order mutations in WUSCHEL‐LIKE HOMEOBOX3 (WOX3) genes, involved in mediolateral patterning of plant lateral organs, inform a model for the fusion of coleoptilar margins during maize embryo development.Genetic, RNA‐targeting, and morphological evidence supports models for cotyledon evolution where the scutellum and coleoptile, respectively, comprise the distal and proximal domains of the highly modified, single grass cotyledon. [ABSTRACT FROM AUTHOR]

The current study investigated the impact of germination duration on the functional components (vitamin C, γ-aminobutyric acid (GABA), polyphenols, flavonoids) and antioxidant activity of germs and cotyledons of the germinated Chinese chestnut (Castanea mollissima). We utilized seeds of the "Zaofeng" Chinese chestnut to germinate, and sowed the seeds in wet sand at 22 °C and 85% relative humidity. The germination rate, length, diameter, and fresh weight of the sprouts were investigated at 0, 2, 4, 6, 8, and 10 days after sowing, and the kinetic changes of amylose, amylopectin, sugar components, soluble protein, vitamin C, GABA, total phenols, flavonoids, and the DPPH and ABTS free radical scavenging activity in the germs and cotyledons were monitored, respectively. The findings revealed that the germination rate and germ biomass increased continuously during germination. The germination rate reached 90% on the 8th day after sowing. Germination reduced amylose in cotyledons from 42.3% to 34.2%, amylopectin from 42.9% to 25.8%, total sugar from 12.6% to 11.4%, and vitamin C from 1.45 mg/g to 0.77 mg/g. Meanwhile, soluble protein in the embryos rose from 0.31% to 0.60%, vitamin C from 21.1 to 29.4 mg/g, GABA from 0.49 to 1.68 mg/g, total flavonoids from 53.6 to 129.7 mg/g, and ABTS antioxidant activity from 1.52 to 3.27 μmol TE/g. The average contents of D-fructose, inositol, vitamin C, GABA, polyphenols, and flavonoids and the DPPH and ABTS antioxidant activity in germs were as high as 22.5, 6, 35, 7.5, 10, 20, and 10 and 20-fold those of cotyledons, respectively. Especially, the average content of glucose in germ was as high as 80-fold that of cotyledon. D-xylulose, D-galacturonic acid, and D-ribose were only found in germs, but not in cotyledons. Considering the germ biomass and functional components content, germs of Chinese chestnuts germinated at 22 °C for 8 days are considered the most suitable raw material for functional food products. In conclusion, controlled germination not only enhances the physicochemical and functional properties of Chinese chestnut germs but also reduces the caloric content and improves the nutritional composition of the cotyledons appropriately. Moreover, the comprehensive evaluation of compositional changes and functionality in the embryo and cotyledon of Chinese chestnuts will provide a solid foundation for subsequent functional food processing utilizing germinated Chinese chestnuts. [ABSTRACT FROM AUTHOR]

Light is crucial for plants and serves as a signal for modulating their growth. Under shade, where red to far-red light ratio is low, plants exhibit shade avoidance responses (SAR). LONG HYPOCOTYL IN FAR-RED 1 (HFR1) and ELONGATED HYPOCOTYL 5 (HY5) are known to be negative regulators of SAR and physically interact with one another. However, transcriptional regulatory network underlying SAR by these two transcription factors has not been explored. Here, we performed organ-specific transcriptome analyses of Arabidopsis thaliana hfr1-5, hy5-215 and hfr1hy5 to identify genes that are co-regulated by HFR1 and HY5 in hypocotyls and cotyledons. Genes co-regulated by HFR1 and HY5 were enriched in various processes related to cell wall modification and chlorophyll biosynthesis in hypocotyls. Phytohormone (abscisic acid and jasmonic acid) and light responses were significantly regulated by HFR1 and HY5 in both organs, though it is more prominent under shade in cotyledons. HFR1 and HY5 also differentially regulate the expression of the cell wall-related genes for xyloglucan endotransglucosylase/hydrolase, expansin, arabinogalactan protein and class III peroxidase depending on the organs. Furthermore, HFR1 and HY5 cooperatively regulated hypocotyl responsiveness to shade through auxin metabolism. Together, our study illustrates the importance of the HFR1-HY5 module in regulating organ-specific shade responses in Arabidopsis. [ABSTRACT FROM AUTHOR]

Cold stress affects the seed germination and early growth of winter rapeseed, leading to yield losses. We employed transmission electron microscopy, physiological analyses, metabolome profiling, and transcriptome sequencing to understand the effect of cold stress (0 °C, LW) on the cotyledons of cold-tolerant (GX74) and -sensitive (XY15) rapeseeds. The mesophyll cells in cold-treated XY15 were severely damaged compared to slightly damaged cells in GX74. The fructose, glucose, malondialdehyde, and proline contents increased after cold stress in both genotypes; however, GX74 had significantly higher content than XY15. The pyruvic acid content increased after cold stress in GX74, but decreased in XY15. Metabolome analysis detected 590 compounds, of which 32 and 74 were differentially accumulated in GX74 (CK vs. cold stress) and XY15 (CK vs. cold stressed). Arachidonic acid and magnoflorine were the most up-accumulated metabolites in GX74 subjected to cold stress compared to CK. There were 461 and 1481 differentially expressed genes (DEGs) specific to XY15 and GX74 rapeseeds, respectively. Generally, the commonly expressed genes had higher expressions in GX74 compared to XY15 in CK and cold stress conditions. The expression changes in DEGs related to photosynthesis-antenna proteins, chlorophyll biosynthesis, and sugar biosynthesis-related pathways were consistent with the fructose and glucose levels in cotyledons. Compared to XY15, GX74 showed upregulation of a higher number of genes/transcripts related to arachidonic acid, pyruvic acid, arginine and proline biosynthesis, cell wall changes, reactive oxygen species scavenging, cold-responsive pathways, and phytohormone-related pathways. Taken together, our results provide a detailed overview of the cold stress responses in rapeseed cotyledons. [ABSTRACT FROM AUTHOR]

The article examines the GoPGS gene's role in regulating pigment gland size in cotton plants and its connection to biotic stress tolerance. Researchers discovered that suppressing the GoPGS gene resulted in larger pigment glands and increased resistance to pests and pathogens. They also found that the GoPGS gene is controlled by the GoPGF gene and is involved in the jasmonic acid pathway. These findings offer insights into the development of cotton pigment glands and their role in defending against biotic stress. Manipulating the GoPGS gene's activity may be a potential method for enhancing cotton plants' resistance to biotic stresses. [Extracted from the article]

Day length modulates hypocotyl elongation in seedlings to optimize their overall fitness. Variations in cell growth‐associated genes are regulated by several transcription factors. However, the specific transcription factors through which the plant clock increases plant fitness are still being elucidated. In this study, we identified the no apical meristem, Arabidopsis thaliana‐activating factor (ATAF‐1/2), and cup‐shaped cotyledon (NAC) family transcription factor ATAF1 as a novel repressor of hypocotyl elongation under a short‐day (SD) photoperiod. Variations in day length profoundly affected the transcriptional and protein levels of ATAF1. ATAF1‐deficient mutant exhibited increased hypocotyl length and cell growth‐promoting gene expression under SD conditions. Moreover, ATAF1 directly targeted and repressed the expression of the cycling Dof factor 1/5 (CDF1/5), two key transcription factors involved in hypocotyl elongation under SD conditions. Additionally, ATAF1 interacted with and negatively modulated the effects of phytochrome‐interacting factor (PIF), thus inhibiting PIF‐promoted gene expression and hypocotyl elongation. Taken together, our results revealed ATAF1–PIF as a crucial pair modulating the expression of key transcription factors to facilitate plant growth during day/night cycles under fluctuating light conditions. Summary statement: This study identified Arabidopsis NAC transcription factor Arabidopsis thaliana‐activating factor (ATAF1) as a novel repressor of hypocotyl elongation under short‐day conditions. ATAF1 controls the transcription levels of key regulator CDF1/5 by repressing the central regulators phytochrome‐interacting factor via protein–protein interaction. [ABSTRACT FROM AUTHOR]

A stoma forms by a series of asymmetric divisions of stomatal lineage precursor cell and the terminal division of a guard mother cell (GMC). GMC division is restricted to once through genetic regulation mechanisms. Here, we show that nitric oxide (NO) is involved in the regulation of the GMC division. NO donor treatment results in the formation of single guard cells (SGCs). SGCs are also produced in plants that accumulate high NO, whereas clustered guard cells (GCs) appear in plants with low NO accumulation. NO treatment promotes the formation of SGCs in the stomatal signalling mutants sdd1, epf1 epf2, tmm1, erl1 erl2 and er erl1 erl2, reduces the cell number per stomatal cluster in the fama‐1 and flp1 myb88, but has no effect on stomatal of cdkb1;1 cyca2;234. Aminocyclopropane‐1‐carboxylic acid (ACC), a positive regulator of GMC division, reduces the NO‐induced SGC formation. Further investigation found NO inhibits ACC synthesis by repressing the expression of several ACC SYNTHASE (ACS) genes, and in turn ACC represses NO accumulation by promoting the expression of HEMOGLOBIN 1 (HB1) encoding a NO scavenger. This work shows NO plays a role in the regulation of GMC division by modulating ACC accumulation in the Arabidopsis cotyledon. Summary statement: Nitric oxide is able to repress the terminal division of guard mother cell (GMC) by reducing the accumulation of aminocyclopropane‐1‐carboxylic acid which is a positive regulator of GMC division. [ABSTRACT FROM AUTHOR]

Black soybeans with green cotyledon have long been widely consumed in the East due to their high content of health-promoting anthocyanins and lutein. However, major anti-nutritional and allergenic components such as lectin, Kunitz trypsin inhibitor (KTI), P34, lipoxygenase, and stachyose are contained in mature seed. The objective of this research is to breed a soybean line with a black seed coat, a green cotyledon, and the penta null genotype (lele-titi-p34p34-lox1lox1lox2lox2lox3lox3-rs2rs2) for all five components. The F2 plant strain with penta null genotype for lectin, KTI, P34, lipoxygenase, and stachyose components was developed. The breeding line has purple flower, determinate growth habit, brown pod, black seed coat and green cotyledon. The stem height of the breeding line was 57.0 cm and 100 seed weight was 31.5 g. This is the first soybean breeding line with black seed coat, green cotyledon and penta null genotypes for lectin, KTI, P34, lipoxygenase, and stachyose factors. This line will be used as parent to improve a black soybean cultivar with green cotyledon that have significantly reduced anti-nutritional and allergenic traits. [ABSTRACT FROM AUTHOR]

The article presents the biological features of Arctium tomentosum Mill. in natural and sowing conditions, the changes in morpho-anatomical structure of vegetative organs in ontogenesis. The growth rate of the germinal root was quite active, and the formation of many lateral roots was observed at the juvenile stage of life. There was an increase of the neck of the germinal root in the immature state, the formation of primary and secondary lateral roots in length, and an increase in the level of growth of the germinal root in the virginal age state. In the generative state, in the second year of life, the lateral roots form two distinct layers. The seed shell in the natural environment is lamellar, without protein, the seed is well ripened. In the next juvenile state, it was observed that the components of the xylem and phloem were not fully formed in the leaf-like cotyledon, with an underdeveloped mesophyll, of a homogeneous type. The first anatomical features in the root structure have been clarified. The size and shape of mesophyll cells are stable, columnar and loose parenchyma are determined, conductive tissues are formed. The anatomical structure of the root undergoes a period of over-development. In the generative state, the size of the central cylinder increased in the structure of the root, the layer of cutin thickened on the leaves, and the layer of columnar mesophyll containing chlorophyll grains increased. There was an accumulation of idiotic cells and needle-like calcium oxalate druzes in the root. [ABSTRACT FROM AUTHOR]

Because of the lack of good seedling positioning during vegetable grafting, there are issues such as high labor costs and long grafting time. This article proposes a negative pressure suction seedling positioning method for seed leaves based on the characteristic parameters of cucumber spike wood, and designs a flexible adsorption positioning mechanism for spike wood. Firstly, the ventral surface curve trajectories of cucumber cotyledons were extracted using Matlab software, and then a shape-adaptive design was applied to the attachment surface of the flexible suction positioning mechanism, and a computational fluid dynamics model of the airflow field was established. By combining Fluent simulation analysis with orthogonal experiments, the effect of suction hole diameter, vacuum negative pressure value, suction hole quantity, and suction hole depth on the adsorption effect of the suction head was analyzed, the main and secondary factors and operational indicators that affect the adsorption effect are evaluated. The optimal parameter combination: suction hole diameter of 1.5 mm, vacuum negative pressure value of 2 kPa, suction hole quantity of 42, and suction hole depth of 2 mm, has been found. A verification experiment was conducted on a test bench, and the experimental results show that the success rate of leaf absorption using the optimal parameter combination is 97.69%, which indicates that the suction head is designed reasonably and meets the requirements of grafting. [ABSTRACT FROM AUTHOR]

In our research, we utilized six small-fruited pepper germplasms as materials, selected cotyledons with the petiole and hypocotyls as explants, and conducted in vitro regeneration studies. Our outcomes specify that the most suitable explant is cotyledon with the petiole, and the suitable genotype is HNUCA341. The optimal medium for inducing and elongating adventitious buds for this genotype is Murashige and Skoog medium (MS) + 9.12 μM Zeatin (ZT) + 0.57 μM 3-Indoleacetic acid (IAA), with a bud induction rate of 44.4%. The best rooting induction medium is MS + 1.14 μM IAA, with a rooting rate of 86.7%. Research on the addition of exogenous hormones has revealed that the induction speed of buds in small-fruited pepper (HNUCA341) in the combination of ZT and IAA hormones (abbreviated as ZI) is quicker, and the induction effect is better. The histological observations indicate that ZI treatment accelerates the initiation of explant division and differentiation, causing a shorter duration of vascular-bundle tissue production. The plant hormone signaling pathway was significantly enriched by Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, including ARR9 (LOC107843874, LOC107843885), ARR4 (LOC107848380, LOC107862455), AHK4 (LOC107870540), AHP1 (LOC107839518), LAX2 (LOC107846008), SAUR36 (LOC107852624), IAA8 (LOC107841020), IAA16 (LOC107839415), PYL4 (LOC107843441), and PYL6 (LOC107871127); these significantly enriched genes may be associated with in vitro regeneration. In addition, the carbon metabolism pathway and plant mitogen-activated protein kinase (MAPK) signaling pathway are also significantly enriched in KEGG. The results of the Gene Ontology (GO) analysis revealed that differentially expressed genes related to carbon metabolism and fixation, photosynthesis and MAPK signaling pathways were upregulated under ZI treatment. It was found that they might be associated with enhanced regeneration in vitro. Furthermore, we also screened out differentially expressed transcription factors, primarily from the MYB, bHLH, AP2/ERF, and NAC families. Overall, our work accumulated important data for the in-depth analysis of the molecular mechanism of in vitro regeneration of pepper, and provides valuable germplasm for establishing an efficient stable pepper genetic-transformation system based on tissue culture. [ABSTRACT FROM AUTHOR]

Background: The co-occurrence of C4 and CAM photosynthesis in a single species seems to be unusual and rare. This is likely due to the difficulty in effectively co-regulating both pathways. Here, we conducted a comparative transcriptomic analysis of leaves and cotyledons of the C4-like species Sesuvium sesuvioides (Aizoaceae) using RNA-seq. Results: When compared to cotyledons, phosphoenolpyruvate carboxylase 4 (PEPC4) and some key C4 genes were found to be up-regulated in leaves. During the day, the expression of NADP-dependent malic enzyme (NADP-ME) was significantly higher in cotyledons than in leaves. The titratable acidity confirmed higher acidity in the morning than in the previous evening indicating the induction of weak CAM in cotyledons by environmental conditions. Comparison of the leaves of S. sesuvioides (C4-like) and S. portulacastrum (C3) revealed that PEPC1 was significantly higher in S. sesuvioides, while PEPC3 and PEPC4 were up-regulated in S. portulacastrum. Finally, potential key regulatory elements involved in the C4-like and CAM pathways were identified. Conclusions: These findings provide a new species in which C4-like and CAM co-occur and raise the question if this phenomenon is indeed so rare or just hard to detect and probably more common in succulent C4 lineages. [ABSTRACT FROM AUTHOR]

SUMMARY: Plant triacylglycerols (TAG) are used in food and various industrial feedstocks. LEAFY COTYLEDON 2 (LEC2), a master positive regulator of TAG biosynthesis, regulates a complex network of transcription factors (TFs) during seed development. Aside from WRINKLED1 (WRI1), the TFs regulated by LEC2 related to TAG biosynthesis have not yet been identified. Previously, we identified 25 seed‐expressing TFs that were upregulated in Arabidopsis leaves that overexpressed senescence‐induced LEC2. In this study, each of the 25 TFs was transiently expressed in the leaves of Nicotiana benthamiana to identify unknown TFs that regulate TAG biosynthesis. The TAG content of the transformed leaves was analyzed using thin layer chromatography and gas chromatography. We observed that five TFs, ARABIDOPSIS RESPONSIVE REGULATOR 21 (ARR21), AINTEGUMENTA‐LIKE 6 (AIL6), APETALA2/ETHYLENE RESPONSIVE FACTOR 55 (ERF55), WRKY DNA‐BINDING PROTEIN 8 (WRKY8), and ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 38 (ANAC038) increased TAG synthesis in the leaves. Among these, the promoters of AIL6, ERF55, WRKY8, and ANAC038 contain RY motifs, which are LEC2‐binding sites activated by LEC2. AIL6 overexpression in Arabidopsis increased the total fatty acid (FA) content in seeds and altered the FA composition, with increases in 16:0, 18:1, and 18:2 and decreases in 18:0, 18:3, and 20:1 compared with those in the wild type (WT). AIL6 overexpression activates several FA and TAG biosynthesis genes. Therefore, our study successfully identified several new TFs regulated by LEC2 in TAG biosynthesis and showed that AIL6 increased the TAG content in seeds. [ABSTRACT FROM AUTHOR]

Qualea grandiflora Mart. is an aluminum (Al)‐accumulating Cerrado species with a metabolic dependency on Al. This study aimed to determine the presence and concentration of Al and other reserve components in Q. grandiflora seeds, as well as their respective distribution patterns, mobilization, and usage during germination and seedling growth. Thus, the concentration of Al and other minerals in seeds, seedlings, and soils was measured. Also, histochemical and energy‐dispersive X‐ray spectroscopy (EDS) analyses were performed to observe the distribution of Al, proteins, and lipids in Q. grandiflora seeds and seedlings. Additionally, the concentration of proteins and lipids was assessed as well. Hence, even in soils with low exchangeable Al3+, Q. grandiflora seeds accumulated about 6.43 g of Al/kg of dry matter (DM) together with considerable concentrations of N, P, K, Ca, and Mg. Exogenous Al had no effect on the germination properties of Q. grandiflora seeds. Furthermore, approximately 60% of the seed Al was translocated to seedling leaves. Proteins and lipids were the main organic reserves in Q. grandiflora seeds. The histochemical analysis revealed that the bulk of Al in seeds was in the cotyledons, which were also the location sites of proteins and lipids. Proteins and lipids were the primary source of energy and carbon for seedling growth. Therefore, fatty acids, proteins, and Al could play a central role during seed germination and seedling establishment, which could help to explain why this species is one of the most widespread plants in the Cerrado. [ABSTRACT FROM AUTHOR]

Introduction: Abscisic acid (ABA) can negatively regulate seed germination, but the mechanisms of ABA-mediated metabolism modulation are not well understood. Moreover, it remains unclear whether metabolic pathways vary with the different tissue parts of the embryo, such as the radicle, hypocotyl and cotyledon. Methods: In this report, we performed the first comprehensive metabolome analysis of the radicle and hypocotyl + cotyledon in Pinus koraiensis seeds in response to ABA treatment during germination. Results and discussion: Metabolome profiling showed that following ABA treatment, 67 significantly differentially accumulated metabolites in the embryo were closely associated with pyrimidine metabolism, phenylalanine metabolism, cysteine and methionine metabolism, galactose metabolism, terpenoid backbone biosynthesis, and glutathione metabolism. Meanwhile, 62 metabolites in the hypocotyl + cotyledon were primarily involved in glycerophospholipid metabolism and glycolysis/gluconeogenesis. We can conclude that ABA may inhibit Korean pine seed germination primarily by disrupting the biosynthesis of certain plant hormones mediated by cysteine and methionine metabolism and terpenoid backbone biosynthesis, as well as reducing the reactive oxygen species scavenging ability regulated by glutathione metabolism and shikimate pathway in radicle. ABA may strongly disrupt the structure and function of cellular membranes due to alterations in glycerophospholipid metabolism, and weaken glycolysis/gluconeogenesis in the hypocotyl + cotyledon, both of which are major contributors to ABAmediated inhibition of seed germination. These results highlight that the spatial modulation of metabolic pathways in Pinus koraiensis seeds underlies the germination response to ABA. [ABSTRACT FROM AUTHOR]

This study describes Siphoneugena carolynae (Myrtaceae), a new species from the Brazilian Atlantic Forest, in the state of Rio de Janeiro. The species inhabits inselberg forests and differs from all other species of Siphoneugena by the following exclusive combination of morphological characters: relatively long petioles, leaf blades chartaceous with midvein canaliculate adaxially, inflorescences in racemes with a markedly compressed and indistinguishable main axis, hypanthium markedly constricted above the ovary, calyx calyptrate, ovaries with two locules, each with four ovules, and cotyledons densely covered with foveolate glands. We herein provide taxonomic notes, morphological plates (derived from both fresh and dried material), and a distribution map. Regarding the conservation status, the new species is preliminarily assessed as Data Deficient (DD), but comments on population size and possible threats to the habitat are presented. [ABSTRACT FROM AUTHOR]

This study aims to establish an efficient protocol for protoplast isolation, cell division, and callus induction in two carnation cultivars, Chabaud and Giant Chabaud, by examining the influence of different types of plant tissue, enzyme concentrations, incubation times, cotyledon ages, and medium compositions. Our results indicate that protoplast yield varies significantly between different plant tissues, with true leaves offering the highest yield and viability, especially under a 0.1% driselase concentration and a 6-h incubation time. We observed that increasing the driselase concentration to 1.0% significantly reduced protoplast yields in all tissues tested. In addition, the age of the cotyledons notably affected protoplast yield, with younger cotyledons providing higher yields. The Murashige and Skoog medium supplemented with 1 mg/L zeatin and 1 mg/L 2,4-dichlorophenoxyacetic acid (2,4-D) proved to be the most effective for promoting cell division and colony formation from protoplasts derived from cotyledons and true leaves. The study also found that plant growth regulators (PGRs) significantly influence callus proliferation, with differences observed between protoplast sources. [ABSTRACT FROM AUTHOR]

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Phytoplasmas manipulate host plant development to benefit insect vector colonization and their own invasion. However, the virulence factors and mechanisms underlying small-leaf formation caused by jujube witches' broom (JWB) phytoplasmas remain largely unknown. Here, effectors SJP1 and SJP2 from JWB phytoplasmas were identified to induce small-leaf formation in jujube (Ziziphus jujuba). In vivo interaction and expression assays showed that SJP1 and SJP2 interacted with and stabilized the transcription factor ZjTCP2. Overexpression of SJP1 and SJP2 in jujube induced ZjTCP2 accumulation. In addition, the abundance of miRNA319f_1 was significantly reduced in leaves of SJP1 and SJP2 transgenic jujube plants and showed the opposite pattern to the expression of its target, ZjTCP2 , which was consistent with the pattern in diseased leaves. Overexpression of ZjTCP2 in Arabidopsis promoted ectopic leaves arising from the adaxial side of cotyledons and reduced leaf size. Constitutive expression of the miRNA319f_1 precursor in the 35S::ZjTCP2 background reduced the abundance of ZjTCP2 mRNA and reversed the cotyledon and leaf defects in Arabidopsis. Therefore, these observations suggest that effectors SJP1 and SJP2 induced small-leaf formation, at least partly, by interacting with and activating ZjTCP2 expression both at the transcriptional and the protein level, providing new insights into small-leaf formation caused by phytoplasmas in woody plants. [ABSTRACT FROM AUTHOR]

Summary: The potential for totipotency exists in all plant cells; however, the underlying mechanisms remain largely unknown. Earlier findings have revealed that the overexpression of LEAFY COTYLEDON 2 (LEC2) can directly trigger the formation of somatic embryos on the cotyledons of Arabidopsis. Furthermore, cotyledon cells that overexpress LEC2 accumulate significant lipid reserves typically found in seeds. The precise mechanisms and functions governing lipid accumulation in this process remain unexplored.In this study, we demonstrate that WRINKLED1 (WRI1), the key regulator of lipid biosynthesis, is essential for somatic embryo formation, suggesting that WRI1‐mediated lipid biosynthesis plays a crucial role in the transition from vegetative to embryonic development.Our findings indicate a direct interaction between WRI1 and LEC2, which enhances the enrichment of LEC2 at downstream target genes and stimulates their induction. Besides, our data suggest that WRI1 forms a complex with LEC1, LEC2, and FUSCA3 (FUS3) to facilitate the accumulation of auxin and lipid for the somatic embryo induction, through strengthening the activation of YUCCA4 (YUC4) and OLEOSIN3 (OLE3) genes.Our results uncover a regulatory module controlled by WRI1, crucial for somatic embryogenesis. These findings provide valuable insights into our understanding of plant cell totipotency. [ABSTRACT FROM AUTHOR]

As sessile organisms, land plants experience various forms of environmental stresses throughout their life span. Therefore, plants have developed extensive and complicated defense mechanisms, including a robust DNA damage response (DDR) and DNA repair systems for maintaining genome integrity. In Arabidopsis , the NAC [NO APICAL MERISTEM (NAM), ARABIDOPSIS TRANSCRIPTION ACTIVATION FACTOR (ATAF), CUP-SHAPED COTYLEDON (CUC)] domain family transcription factor SUPPRESSOR OF GAMMA RESPONSE 1 (SOG1) plays an important role in regulating DDR. Here, we show that SOG1 plays a key role in regulating the repair of salinity-induced DNA double-strand breaks (DSBs) via the homologous recombination (HR) pathway in Arabidopsis. The sog1-1 mutant seedlings display a considerably slower rate of repair of salinity-induced DSBs. Accumulation of SOG1 protein increases in wild-type Arabidopsis under salinity stress, and it enhances the expression of HR pathway–related genes, including RAD51, RAD54 and BReast CAncer gene 1 (BRCA1), respectively, as found in SOG1 overexpression lines. SOG1 binds specifically to the AtRAD54 promoter at the 5ʹ-(N)4GTCAA(N)3C-3ʹ consensus sequence and positively regulates its expression under salinity stress. The phenotypic responses of sog1-1/atrad54 double mutants suggest that SOG1 functions upstream of RAD54 , and both these genes are essential in regulating DDR under salinity stress. Furthermore, SOG1 interacts directly with BRCA1, an important component of the HR-mediated DSB repair pathway in plants, where BRCA1 appears to facilitate the binding of SOG1 to the RAD54 promoter. At the genetic level, SOG1 and BRCA1 function interdependently in modulating RAD54 expression under salinity-induced DNA damage. Together, our results suggest that SOG1 regulates the repair of salinity-induced DSBs via the HR-mediated pathway through genetic interactions with RAD54 and BRCA1 in Arabidopsis. [ABSTRACT FROM AUTHOR]

Auxin plays a key role in plant growth and development through auxin local synthesis, polar transport, and auxin signaling. Many previous reports on Arabidopsis have found that various types of auxin‐related genes are involved in the development of the cotyledon, including the number, symmetry, and morphology of the cotyledon. However, the molecular mechanism by which auxin is involved in cotyledon formation remains to be elucidated. PID, which encodes a serine/threonine kinase localized to the plasma membrane, has been found to phosphorylate the PIN1 protein and regulate its polar distribution in the cell. The loss of function of pid resulted in an abnormal number of cotyledons and defects in inflorescence. It was interesting that the pid mutant interacted synergistically with various types of mutant to generate the severe developmental defect without cotyledon. PID and these genes were indicated to be strongly correlated with cotyledon formation. In this review, PID‐centered genetic interactions, related gene functions, and corresponding possible pathways are discussed, providing a perspective that PID and its co‐regulators control cotyledon formation through multiple pathways. [ABSTRACT FROM AUTHOR]

Leaf color is one of the most important phenotypic features in horticultural crops and directly related to the contents of photosynthetic pigments. Most leaf color mutants are determined by the altered chlorophyll or carotenoid, which can be affected by light quality and intensity. Our previous study obtained a Chinese cabbage yellow cotyledon mutant that exhibited obvious yellow phenotypes in the cotyledons and the new leaves. However, the underlying mechanisms in the formation of yellow cotyledons and leaves remain unclear. In this study, the Chinese cabbage yellow cotyledon mutant 19YC-2 exhibited obvious difference in leaf color and abnormal chloroplast ultrastructure compared to the normal green cotyledon line 19GC-2. Remarkably, low-intensity light treatment caused turn-green leaves and a significant decrease in carotenoid content in 19YC-2. RNA-seq analysis revealed that the pathways of photosynthesis antenna proteins and carotenoid biosynthesis were significantly enriched during the process of leaf color changes, and many differentially expressed genes related to the two pathways were identified to respond to different light intensities. Remarkably, BrPDS and BrLCYE genes related to carotenoid biosynthesis showed significantly higher expression in 19YC-2 than that in 19GC-2, which was positively related to the higher carotenoid content in 19YC-2. In addition, several differentially expressed transcription factors were also identified and highly correlated to the changes in carotenoid content, suggesting that they may participate in the regulatory pathway of carotenoid biosynthesis. These findings provide insights into the molecular mechanisms of leaf color changes in yellow cotyledon mutant 19YC-2 of Chinese cabbage. [ABSTRACT FROM AUTHOR]

Polycotyly, an interesting characteristic of seed-bearing dicotyledonous plants with more than two cotyledons, represents one of the least explored plant characters for utilization, even though cotyledon number was used to classify flowering plants in 1682. Gymnosperm and angiosperm species are generally known to have one or two cotyledons, but scattered reports exist on irregular cotyledon numbers in many plant species, and little is known about the extent of polycotyly in plant taxa. Here, we attempt to update the documentation of reports on polycotyly in plant species and highlight some lines of research for a better understanding of polycotyly. This effort revealed 342 angiosperm species of 237 genera in 80 (out of 416) families and 160 gymnosperm species of 26 genera in 6 (out of 12) families with reported or cited polycotyly. The most advanced research included the molecular-based inference of the phylogeny of flowering plants, showing a significant departure from the cotyledon-based classification of angiosperm plants, and the application of genetic cotyledon mutants as tools to clone and characterize the genes regulating cotyledon development. However, there were no reports on breeding lines with a 100% frequency of polycotyly. Research is needed to discover plant species with polycotyly and to explore the nature, development, genetics, evolution, and potential use of polycotyly. [ABSTRACT FROM AUTHOR]