686 results on '"Cooper, Philip J"'
Search Results
102. Urbanisation and asthma in low-income and middle-income countries: a systematic review of the urban–rural differences in asthma prevalence
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Rodriguez, Alejandro, primary, Brickley, Elizabeth, additional, Rodrigues, Laura, additional, Normansell, Rebecca Alice, additional, Barreto, Mauricio, additional, and Cooper, Philip J, additional
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- 2019
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103. Parasites and allergy: a case of more means less and less means more?
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Cooper, Philip J, primary and Amoah, Abena S., additional
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- 2019
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104. Impact of early life exposures to geohelminth infections on the development of vaccine immunity, allergic sensitization, and allergic inflammatory diseases in children living in tropical Ecuador: the ECUAVIDA birth cohort study
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Sandoval Carlos A, Guadalupe Irene, Chico Martha E, Cooper Philip J, Mitre Edward, Platts-Mills Thomas AE, Barreto Mauricio L, Rodrigues Laura C, Strachan David P, and Griffin George E
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Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Geohelminth infections are highly prevalent infectious diseases of childhood in many regions of the Tropics, and are associated with significant morbidity especially among pre-school and school-age children. There is growing concern that geohelminth infections, particularly exposures occurring during early life in utero through maternal infections or during infancy, may affect vaccine immunogenicity in populations among whom these infections are endemic. Further, the low prevalence of allergic disease in the rural Tropics has been attributed to the immune modulatory effects of these infections and there is concern that widespread use of anthelmintic treatment in high-risk groups may be associated with an increase in the prevalence of allergic diseases. Because the most widely used vaccines are administered during the first year of life and the antecedents of allergic disease are considered to occur in early childhood, the present study has been designed to investigate the impact of early exposures to geohelminths on the development of protective immunity to vaccines, allergic sensitization, and allergic disease. Methods/Design A cohort of 2,403 neonates followed up to 8 years of age. Primary exposures are infections with geohelminth parasites during the last trimester of pregnancy and the first 2 years of life. Primary study outcomes are the development of protective immunity to common childhood vaccines (i.e. rotavirus, Haemophilus influenzae type B, Hepatitis B, tetanus toxoid, and oral poliovirus type 3) during the first 5 years of life, the development of eczema by 3 years of age, the development of allergen skin test reactivity at 5 years of age, and the development of asthma at 5 and 8 years of age. Potential immunological mechanisms by which geohelminth infections may affect the study outcomes will be investigated also. Discussion The study will provide information on the potential effects of early exposures to geohelminths (during pregnancy and the first 2 years of life) on the development of vaccine immunity and allergy. The data will inform an ongoing debate of potential effects of geohelminths on child health and will contribute to policy decisions on new interventions designed to improve vaccine immunogenicity and protect against the development of allergic diseases. Trial registration Current Controlled Trials ISRCTN41239086.
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- 2011
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105. Poverty, dirt, infections and non-atopic wheezing in children from a Brazilian urban center
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Cooper Philip J, Cruz Alvaro A, Prado Matildes, Alvim Sheila, Amorim Leila D, Esquivel Renata, Fiaccone Rosemeire, Cunha Sergio S, Barreto Mauricio L, Santos Darci N, Strina Agostino, Alcantara-Neves Neuza, and Rodrigues Laura C
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Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background The causation of asthma is poorly understood. Risk factors for atopic and non-atopic asthma may be different. This study aimed to analyze the associations between markers of poverty, dirt and infections and wheezing in atopic and non-atopic children. Methods 1445 children were recruited from a population-based cohort in Salvador, Brazil. Wheezing was assessed using the ISAAC questionnaire and atopy defined as allergen-specific IgE ≥0.70 kU/L. Relevant social factors, environmental exposures and serological markers for childhood infections were investigated as risk factors using multivariate multinomial logistic regression. Results Common risk factors for wheezing in atopic and non-atopic children, respectively, were parental asthma and respiratory infection in early childhood. No other factor was associated with wheezing in atopic children. Factors associated with wheezing in non-atopics were low maternal educational level (OR 1.49, 95% CI 0.98-2.38), low frequency of room cleaning (OR 2.49, 95% CI 1.27-4.90), presence of rodents in the house (OR 1.48, 95% CI 1.06-2.09), and day care attendance (OR 1.52, 95% CI 1.01-2.29). Conclusions Non-atopic wheezing was associated with risk factors indicative of poverty, dirt and infections. Further research is required to more precisely define the mediating exposures and the mechanisms by which they may cause non-atopic wheeze.
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- 2010
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106. Estimating adjusted prevalence ratio in clustered cross-sectional epidemiological data
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Moncayo Ana-Lucia, do Carmo Maria, Barreto Maurício L, Cunha Sérgio, Oliveira Nelson F, Fiaccone Rosemeire L, Santos Carlos, Rodrigues Laura C, Cooper Philip J, and Amorim Leila D
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Medicine (General) ,R5-920 - Abstract
Abstract Background Many epidemiologic studies report the odds ratio as a measure of association for cross-sectional studies with common outcomes. In such cases, the prevalence ratios may not be inferred from the estimated odds ratios. This paper overviews the most commonly used procedures to obtain adjusted prevalence ratios and extends the discussion to the analysis of clustered cross-sectional studies. Methods Prevalence ratios(PR) were estimated using logistic models with random effects. Their 95% confidence intervals were obtained using delta method and clustered bootstrap. The performance of these approaches was evaluated through simulation studies. Using data from two studies with health-related outcomes in children, we discuss the interpretation of the measures of association and their implications. Results The results from data analysis highlighted major differences between estimated OR and PR. Results from simulation studies indicate an improved performance of delta method compared to bootstrap when there are small number of clusters. Conclusion We recommend the use of logistic model with random effects for analysis of clustered data. The choice of method to estimate confidence intervals for PR (delta or bootstrap method) should be based on study design.
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- 2008
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107. Environmental determinants of total IgE among school children living in the rural Tropics: importance of geohelminth infections and effect of anthelmintic treatment
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Benitez Susana M, Moncayo Ana-Lucia, Alexander Neal, Cooper Philip J, Chico Martha E, Vaca Maritza G, and Griffin George E
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Immunologic diseases. Allergy ,RC581-607 - Abstract
Abstract Background The environmental factors that determine the elevated levels of polyclonal IgE observed in populations living in the Tropics are poorly understood but may include geohelminth infections. We investigated the association between geohelminth infections and total IgE levels in school children in rural tropical Ecuador, and assessed the effect on IgE of repeated anthelmintic treatments over a period of 12 months. The study was nested within a cluster-randomized study that randomized 68 schools to receive either 400 mg of albendazole every 2 months over a year or no treatment. We studied random samples of children completing follow-up and representing four groups stratified by the presence of geohelminth infection at baseline and treatment allocation. We measured levels of total IgE and anti-A. lumbricoides IgG (used as a measure of past and current geohelminth infectious exposure) in blood samples collected at the start of the study and after 12 months. Results We observed elevated levels of total IgE (compared to standard reference values) at the start of the study in this population of school children (geometric mean, 1,004 IU/mL, range 12 to 22,608 IU/mL)) and baseline IgE levels were strongly associated with parameters of geohelminth infection but not with age, nutritional and socioeconomic status. After 12 months, levels of IgE fell significantly in the treatment (by 35.1%) and no treatment (by 10.4%) groups, respectively, but the fall was significantly greater in the treatment group. Falls in IgE were independently associated with albendazole treatment, having a baseline geohelminth infection and with high baseline levels of anti-A. lumbricoides IgG. Increases in IgE at 12 months were associated with the presence of geohelminth infections and increasing levels of anti-A. lumbricoides IgG at 12 months independent of treatment allocation. Conclusion The data provide evidence that geohelminth infections are an important determinant of total IgE in school children in the rural Tropics and that periodic anthelmintic treatments over 12 months are associated with reductions in IgE. The failure of anthelmintic treatment to reduce IgE levels to that considered normal in industrialized countries may be attributed to continued exposure of children to geohelminths or to the effects of infections in early life in programming a long-lasting Th2-biassed immunity.
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- 2008
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108. Autoimmunity and onchocerciasis
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Cooper, Philip J.
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- 1996
109. A guide to modern statistical analysis of immunological data
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Yazdanbakhsh Maria, Cooper Philip J, Genser Bernd, Barreto Mauricio L, and Rodrigues Laura C
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Immunologic diseases. Allergy ,RC581-607 - Abstract
Abstract Background The number of subjects that can be recruited in immunological studies and the number of immunological parameters that can be measured has increased rapidly over the past decade and is likely to continue to expand. Large and complex immunological datasets can now be used to investigate complex scientific questions, but to make the most of the potential in such data and to get the right answers sophisticated statistical approaches are necessary. Such approaches are used in many other scientific disciplines, but immunological studies on the whole still use simple statistical techniques for data analysis. Results The paper provides an overview of the range of statistical methods that can be used to answer different immunological study questions. We discuss specific aspects of immunological studies and give examples of typical scientific questions related to immunological data. We review classical bivariate and multivariate statistical techniques (factor analysis, cluster analysis, discriminant analysis) and more advanced methods aimed to explore causal relationships (path analysis/structural equation modelling) and illustrate their application to immunological data. We show the main features of each method, the type of study question they can answer, the type of data they can be applied to, the assumptions required for each method and the software that can be used. Conclusion This paper will help the immunologist to choose the correct statistical approach for a particular research question.
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- 2007
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110. Impact of long-term treatment of onchocerciasis with ivermectin in Ecuador: potential for elimination of infection
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Proaño Roberto, Rivera Jorge, Mancero Tamara, Lovato Raquel, Cooper Philip J, Vieira Juan, López Andrea A, Guderian Ronald H, and Guzmán José
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Medicine - Abstract
Abstract Background Onchocerciasis is a leading cause of blindness worldwide, hence elimination of the infection is an important health priority. Community-based treatment programs with ivermectin form the basis of control programs for the disease in Latin America. The long-term administration of ivermectin could eliminate Onchocerca volvulus infection from endemic areas in Latin America. Methods A strategy of annual to twice-annual treatments with ivermectin has been used for onchocerciasis in endemic communities in Ecuador for up to 14 years. The impact of ivermectin treatment on ocular morbidity, and O. volvulus infection and transmission was monitored in seven sentinel communities. Results Over the period 1990–2003, high rates of treatment coverage of the eligible population were maintained in endemic communities (mean 85.2% per treatment round). Ivermectin reduced the prevalence of anterior segment disease of the eye to 0% in sentinel communities and had a major impact on the prevalence and transmission of infection, with possible elimination of infection in some foci. Conclusion The distribution of ivermectin in endemic communities in Ecuador might have eliminated ocular morbidity and significant progress has been made towards elimination of the infection. A strategy of more frequent treatments with ivermectin may be required in communities where the infection persists to achieve the objective of elimination of the infection from Ecuador. The elimination of the infection from an endemic country in Latin America would be a major public health achievement and could stimulate the implementation of elimination strategies in other endemic countries.
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- 2007
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111. Leishmania isoenzyme polymorphisms in Ecuador: Relationships with geographic distribution and clinical presentation
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Mimori Tatsuyuki, Barroso Paola A, Korenaga Masataka, Gomez Eduardo A, Kato Hirotomo, Uezato Hiroshi, Marco Jorge D, Armijos Rodrigo X, Calvopina Manuel, Cooper Philip J, Nonaka Shigeo, and Hashiguchi Yoshihisa
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Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Determinants of the clinical presentation of the leishmaniases are poorly understood but Leishmania species and strain differences are important. To examine the relationship between clinical presentation, species and isoenzyme polymorphisms, 56 Leishmania isolates from distinct presentations of American tegumentary leishmaniasis (ATL) from Ecuador were analyzed. Methods Isolates were characterized by multilocus enzyme electrophoresis for polymorphisms of 11 isoenzymes. Patients were infected in four different ecologic regions: highland and lowland jungle of the Pacific coast, Amazonian lowlands and Andean highlands. Results Six Leishmania species constituting 21 zymodemes were identified: L. (Viannia) panamensis (21 isolates, 7 zymodemes), L. (V.) guyanensis (7 isolates, 4 zymodemes), L. (V.) braziliensis (5 isolates, 3 zymodemes), L. (Leishmania) mexicana (11 isolates, 4 zymodemes), L. (L.) amazonensis (10 isolates, 2 zymodemes) and L. (L.) major (2 isolates, 1 zymodeme). L. panamensis was the species most frequently identified in the Pacific region and was associated with several clinical variants of cutaneous disease (CL); eight cases of leishmaniasis recidiva cutis (LRC) found in the Pacific highlands were associated with 3 zymodemes of this species. Mucocutaneous leishmaniasis found only in the Amazonian focus was associated with 3 zymodemes of L. braziliensis. The papular variant of CL, Uta, found in the Andean highlands was related predominantly with a single zymodeme of L. mexicana. Conclusion Our data show a high degree of phenotypic variation within species, and some evidence for associations between specific variants of ATL (i.e. Uta and LRC) and specific Leishmania zymodemes. This study further defines the geographic distribution of Leishmania species and clinical variants of ATL in Ecuador.
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- 2006
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112. Risk factors for asthma and allergy associated with urban migration: background and methodology of a cross-sectional study in Afro-Ecuadorian school children in Northeastern Ecuador (Esmeraldas-SCAALA Study)
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Stein Renato T, de Carvalho Lain, Genser Bernd, Alcântara-Neves Neuza M, Rodriguez Alejandro, Vaca Maritza G, Chico Martha E, Cooper Philip J, Cruz Alvaro A, Rodrigues Laura C, and Barreto Mauricio L
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Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background Asthma and allergic diseases are becoming increasingly frequent in children in urban centres of Latin America although the prevalence of allergic disease is still low in rural areas. Understanding better why the prevalence of asthma is greater in urban migrant populations and the role of risk factors such as life style and environmental exposures, may be key to understand what is behind this trend. Methods/design The Esmeraldas-SCAALA (Social Changes, Asthma and Allergy in Latin America) study consists of cross-sectional and nested case-control studies of school children in rural and urban areas of Esmeraldas Province in Ecuador. The cross-sectional study will investigate risk factors for atopy and allergic disease in rural and migrant urban Afro-Ecuadorian school children and the nested case-control study will examine environmental, biologic and social risk factors for asthma among asthma cases and non-asthmatic controls from the cross-sectional study. Data will be collected through standardised questionnaires, skin prick testing to relevant aeroallergen extracts, stool examinations for parasites, blood sampling (for measurement of IgE, interleukins and other immunological parameters), anthropometric measurements for assessment of nutritional status, exercise testing for assessment of exercise-induced bronchospasm and dust sampling for measurement of household endotoxin and allergen levels. Discussion The information will be used to identify the factors associated with an increased risk of asthma and allergies in migrant and urbanizing populations, to improve the understanding of the causes of the increase in asthma prevalence and to identify potentially modifiable factors to inform the design of prevention programmes to reduce the risk of allergy in urban populations in Latin America.
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- 2006
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113. Risk factors and immunological pathways for asthma and other allergic diseases in children: background and methodology of a longitudinal study in a large urban center in Northeastern Brazil (Salvador-SCAALA study)
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Genser Bernd, Stein Renato T, Cruz Álvaro A, Carvalho Lain P, Alcântara-Neves Neuza, Cunha Sergio S, Barreto Mauricio L, Cooper Philip J, and Rodrigues Laura C
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Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background The prevalence of asthma and allergic diseases has increased in industrialised countries, and it is known that rates vary according whether the area is urban or rural and to socio-economic status. Surveys conducted in some urban settings in Latin America found high prevalence rates, only exceeded by the rates observed in industrialised English-speaking countries. It is likely that the marked changes in the environment, life style and living conditions in Latin America are responsible for these observations. The understanding of the epidemiological and immunological changes that underlie the increase in asthma and allergic diseases in Latin America aimed by SCAALA studies in Brazil and Ecuador will be crucial for the identification of novel preventive interventions. Methods/Design The Salvador-SCAALA project described here is a longitudinal study involving children aged 4–11 years living in the city of Salvador, Northeastern Brazil. Data on asthma and allergic diseases (rhinitis and eczema) and potential risk factors will be collected in successive surveys using standardised questionnaire. This will be completed with data on dust collection (to dust mite and endotoxin), skin test to most common allergens, stool examinations to helminth and parasites, blood samples (to infection, total and specific IgE, and immunological makers), formaldehyde, physical inspection to diagnoses of eczema, and anthropometric measures. Data on earlier exposures when these children were 0–3 years old are available from a different project. Discussion It is expected that knowledge generated may help identify public health interventions that may enable countries in LA to enjoy the benefits of a "modern" lifestyle while avoiding – or minimising – increases in morbidity caused by asthma and allergies.
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- 2006
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114. Rural to urban migration is associated with increased prevalence of childhood wheeze in a Latin-American city
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Rodriguez, Alejandro, Vaca, Maritza G, Chico, Martha E, Rodrigues, Laura C, Barreto, Mauricio L, and Cooper, Philip J
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Latin America ,internal migration ,wheeze ,population characteristics ,Asthma - Abstract
INTRODUCTION: The urbanisation process has been associated with increases in asthma prevalence in urban and rural areas of low-income and middle-income countries (LMICs). However, although rural to urban migration and migration between cities are considered important determinants of this process, few studies have evaluated the effects of internal migration on asthma in urban populations of LMICs. The present study evaluated the effects of internal migration on the prevalence of wheeze in an urban area of Latin America. METHODS: We did a cross-sectional analysis of 2510 schoolchildren living in the city of Esmeraldas, Ecuador. Logistic regression was used to analyse associations between childhood wheeze and different aspects of migration among schoolchildren. RESULTS: 31% of schoolchildren were migrants. Rural to urban migrants had a higher prevalence of wheeze, (adj.OR=2.01,95% CI1.30 to 3.01, p=0.001) compared with non-migrants. Age of migration and time since migration were associated with wheeze only for rural to urban migrants but not for urban to urban migrants. Children who had migrated after 3 years of age had a greater risk of wheeze (OR 2.51, 95% CI 1.56 to 3.97, p=0.001) than non-migrants while migrants with less than 5 years living in the new residence had a higher prevalence of wheeze than non-migrants (
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- 2017
115. BMC Immunol
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Genser, Bernd, Fischer, Joachim E., Figueiredo, Camila A., Alcântara-Neves, Neuza Maria, Barreto, Mauricio L., and Philip J. Cooper, Philip J. Cooper, et al.
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Conceptual frameworks ,Immuno-epidemiology ,Statistical analysis ,Cytokines ,Correlated immune markers - Abstract
Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2017-06-05T12:30:49Z No. of bitstreams: 1 Mauricio Barreto. Applied...2016.pdf: 1478041 bytes, checksum: f331a7cf1475e0df9da3df21f0826725 (MD5) Made available in DSpace on 2017-06-05T12:30:49Z (GMT). No. of bitstreams: 1 Mauricio Barreto. Applied...2016.pdf: 1478041 bytes, checksum: f331a7cf1475e0df9da3df21f0826725 (MD5) Background: Immunologists often measure several correlated immunological markers, such as concentrations of different cytokines produced by different immune cells and/or measured under different conditions, to draw insights from complex immunological mechanisms. Although there have been recent methodological efforts to improve the statistical analysis of immunological data, a framework is still needed for the simultaneous analysis of multiple, often correlated, immune markers. This framework would allow the immunologists’ hypotheses about the underlying biological mechanisms to be integrated. Results: We present an analytical approach for statistical analys is of correlated immune markers, such as those commonly collected in modern immuno-epidemiological studies. We demonstrate i) how to deal with interdependencies among multiple measurements of the same immune marker, ii) how to analyse association patterns among different markers, iii) how to aggregate different measures and/or markers to immunological summary scores, iv) how to model the inter-relationships among these scores, and v) how to use these scores in epidemiological association analyses. We illustrate the application of our approach to multiple cytokine measurements from 818 children enrolled in a large immuno-epidemiological study (SCAALA Salvador), which aimed to quantify the major immunological mechanisms underlying atopic diseases or asthma. We demonstrate how to aggregate systematically the information captured in multiple cytokine measurements to immunological summary scores aimed at reflecting the presumed underlying immunological mechanisms (Th1/Th2 balance and immune regulatory network). We show how these aggregated immune scores can be used as predictors in regression models with outcomes of immunological studies (e.g. specific IgE) and compare the results to those obtained by a traditional multivariate regression approach. Conclusion: The proposed analytical approach may be especially useful to quantify complex immune responses in immuno-epidemiological studies, where investigators examine the relationship among epidemiological patterns, immune response, and disease outcomes. London
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- 2017
116. Dissociation between skin test reactivity and anti-aeroallergen IgE: Determinants among urban Brazilian children
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Alcantara-Neves, Neuza M., Veiga, Rafael V., Ponte, João C. M., da Cunha, Sérgio S., Simões, Silvia M., Cruz, Álvaro A., Yazdanbakhsh, Maria, Matos, Sheila M., Silva, Thiago Magalhães, Figueiredo, Camila A., Pontes-de-Carvalho, Lain C., Rodrigues, Laura C., Fiaccone, Rosemeire L., Cooper, Philip J., and Barreto, Maurício L.
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lcsh:Medicine ,Families ,Feces ,Allergies ,Medicine and Health Sciences ,Simplexvirus ,Enzyme-Linked Immunoassays ,Child ,lcsh:Science ,Children ,Pathology and laboratory medicine ,Organic Compounds ,Medical microbiology ,Chemistry ,Trichuris ,Helminth Infections ,Child, Preschool ,Physical Sciences ,Viruses ,Pathogens ,Brazil ,Research Article ,Herpesviruses ,Immunology ,Carbohydrates ,Enzyme-Linked Immunosorbent Assay ,Rodentia ,Research and Analysis Methods ,Microbiology ,Polymorphism, Single Nucleotide ,Diagnostic Medicine ,Helminths ,Parasitic Diseases ,Hypersensitivity ,Animals ,Epstein-Barr virus ,Humans ,Immunoassays ,Ascaris lumbricoides ,Skin Tests ,Receptors, IgE ,Organic Chemistry ,lcsh:R ,Organisms ,Chemical Compounds ,Viral pathogens ,Urban Health ,Biology and Life Sciences ,Allergens ,Immunoglobulin E ,Invertebrates ,Microbial pathogens ,Age Groups ,Immunoglobulin G ,People and Places ,Immunologic Techniques ,Cats ,Immunoglobulin epsilon-Chains ,Clinical Immunology ,Population Groupings ,lcsh:Q ,Clinical Medicine ,DNA viruses - Abstract
BACKGROUND: The dissociation between specific IgE and skin prick test reactivity to aeroallergens, a common finding in populations living in low and middle-income countries, has important implications for the diagnosis and treatment of allergic diseases. Few studies have investigated the determinants of this dissociation. In the present study, we explored potential factors explaining this dissociation in children living in an urban area of Northeast Brazil, focusing in particular on factors associated with poor hygiene. METHODS: Of 1445 children from low income communities, investigated for risk factors of allergies, we studied 481 with specific IgE antibodies to any of Blomia tropicalis, Dermatophagoides pteronyssinus, Periplaneta americana and Blatella germanica allergens. Data on demographic, environmental and social exposures were collected by questionnaire; serum IgG and stool examinations were done to detect current or past infections with viral, bacterial, protozoan and intestinal helminth pathogens. We measured atopy by skin prick testing (SPT) and specific IgE (sIgE) to aerollergens in serum (by ImmunoCAP). SIgE reactivity to B. tropicalis extract depleted of carbohydrates was measured by an in-house ELISA. Total IgE was measured by in house capture ELISA. SNPs were typed using Illumina Omni 2.5. RESULTS: Negative skin prick tests in the presence of specific IgE antibodies were frequent. Factors independently associated with a reduced frequency of positive skin prick tests were large number of siblings, the presence of IgG to herpes simplex virus, Ascaris lumbricoides and Trichuris trichiura infections, living in neighborhoods with infrequent garbage collection, presence of rodents and cats in the household and sIgE reactivity to glycosylated B. tropicalis allergens. Also, SNP on IGHE (rs61737468) was negatively associated with SPT reactivity. CONCLUSIONS: A variety of factors were found to be associated with decreased frequency of SPT such as unhygienic living conditions, infections, total IgE, IgE response to glycosylated allergens and genetic polymorphisms, indicating that multiple mechanisms may be involved. Our data, showing that exposures to an unhygienic environment and childhood infections modulate immediate allergen skin test reactivity, provide support for the "hygiene hypothesis".
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- 2017
117. Eotaxin and RANTES Expression by the Dermal Endothelium Is Associated with Eosinophil Infiltration after Ivermectin Treatment of Onchocerciasis
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Cooper, Philip J., Beck, Lisa A., Espinel, Ivan, Deyampert, Nicole M., Hartnell, Adele, Jose, Peter J., Paredes, Wilson, Guderian, Ronald H., and Nutman, Thomas B.
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- 2000
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118. Migration and allergic diseases in a rural area of a developing country
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Rodriguez, Alejandro, Vaca, Maritza G., Chico, Martha E., Rodrigues, Laura C., Barreto, Mauricio L., and Cooper, Philip J.
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- 2016
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119. Geographic distribution of human Blastocystis subtypes in South America
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Ramírez, Juan David, Sánchez, Angie, Hernández, Carolina, Flórez, Carolina, Bernal, María Consuelo, Giraldo, Julio Cesar, Reyes, Patricia, López, Myriam Consuelo, García, Lineth, Cooper, Philip J., Vicuña, Yosselin, Mongi, Florencia, and Casero, Rodolfo D.
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- 2016
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120. Soil‐transmitted helminth parasites and allergy: Observations from Ecuador
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Chico, Martha E., primary, Vaca, Maritza G., additional, Rodriguez, Alejandro, additional, and Cooper, Philip J., additional
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- 2018
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121. Predictors of repeated acute hospital attendance for asthma in children: A systematic review and meta‐analysis
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Ardura‐Garcia, Cristina, primary, Stolbrink, Marie, additional, Zaidi, Seher, additional, Cooper, Philip J., additional, and Blakey, John D., additional
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- 2018
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122. Soil-transmitted helminth infections and nutritional status in Ecuador: findings from a national survey and implications for control strategies
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Moncayo, Ana L, primary, Lovato, Raquel, additional, and Cooper, Philip J, additional
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- 2018
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123. RELAPSE OF NEW WORLD DIFFUSE CUTANEOUS LEISHMANIASIS CAUSED BY LEISHMANIA (LEISHMANIA) MEXICANA AFTER MILTEFOSINE TREATMENT
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Calvopina, Manuel, Gomez, Eduardo A., Sindermann, Herbert, Cooper, Philip J., Hashiguchi, Yoshihisa, Calvopina, Manuel, Gomez, Eduardo A., Sindermann, Herbert, Cooper, Philip J., and Hashiguchi, Yoshihisa
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- 2018
124. Leishmania isoenzyme polymorphisms in Ecuador: Relationships with geographic distribution and clinical presentation
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Calvopina, Manuel, Armijos, Rodrigo X., Marco, Jorge D., Uezato, Hiroshi, Kato, Hirotomo, Gomez, Eduardo A., Korenaga, Masataka, Barroso, Paola A., Mimori, Tatsuyuki, Cooper, Philip J., Nonaka, Shigeo, Hashiguchi, Yoshihisa, Calvopina, Manuel, Armijos, Rodrigo X., Marco, Jorge D., Uezato, Hiroshi, Kato, Hirotomo, Gomez, Eduardo A., Korenaga, Masataka, Barroso, Paola A., Mimori, Tatsuyuki, Cooper, Philip J., Nonaka, Shigeo, and Hashiguchi, Yoshihisa
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- 2018
125. Hygiene, atopy and wheeze–eczema–rhinitis symptoms in schoolchildren from urban and rural Ecuador
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Cooper, Philip J, Vaca, Maritza, Rodriguez, Alejandro, Chico, Martha E, Santos, Darci N, Rodrigues, Laura C, and Barreto, Mauricio L
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Hypersensitivity, Immediate ,Male ,Rural Population ,Wheeze-Rhinitis-Eczema ,Adolescent ,Urban Population ,Urban-Rural ,Eczema ,Respiratory Epidemiology ,Feces ,Risk Factors ,Surveys and Questionnaires ,Prevalence ,Animals ,Humans ,Child ,Students ,Respiratory Sounds ,Rhinitis ,Skin Tests ,Schools ,Atopy ,Farming ,Hygiene ,Allergens ,Cross-Sectional Studies ,Child, Preschool ,Housing ,Female ,Ecuador - Abstract
Background Rural residence is protective against atopy and wheeze–rhinitis–eczema symptoms in developed countries, an effect attributed to farming and poor hygiene exposures. There are few data from developing countries addressing this question. We compared atopy and wheeze–rhinitis–eczema symptoms between urban and rural Ecuador, and explored the effects of farming and poor hygiene exposures. Methods We performed cross sectional studies of schoolchildren living in rural and urban Ecuador. Data on symptoms and farming/hygiene exposures were collected by parental questionnaire, atopy by allergen skin prick test reactivity and geohelminth infections by stool examinations. Results Among 2526 urban and 4295 rural schoolchildren, prevalence was: atopy (10.0% vs 12.5%, p=0.06), wheeze (9.4% vs 10.1%, p=0.05), rhinitis (8.1% vs 6.4%, p=0.02) and eczema (5.9% vs 4.7%, p=0.06). A small proportion of symptoms were attributable to atopy (range 3.9–10.7%) with greater attributable fractions for respiratory symptoms observed in urban schoolchildren. Respiratory symptoms were associated with poor hygiene/farming exposures: wheeze with lack of access to potable water; and rhinitis with household pets, no bathroom facilities and contact with large farm animals. Birth order was inversely associated with respiratory symptoms. Area of residence and atopy had few effects on these associations. Conclusions Urban schoolchildren living in Ecuador have a similar prevalence of atopy, eczema and wheeze but a higher prevalence of rhinitis compared with rural children. Some farming and poor hygiene exposures were associated with an increase in the prevalence of wheeze or rhinitis while birth order was inversely associated with these symptoms.
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- 2013
126. IgG1 Fc N-glycan galactosylation as a biomarker for immune activation
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De Jong, Sanne E., Selman, Maurice H J, Adegnika, Ayola A., Amoah, Abena S., Van Riet, Elly, Kruize, Yvonne C M, Raynes, John G., Rodriguez, Alejandro, Boakye, Daniel, Von Mutius, Erika, Knulst, André C., Genuneit, Jon, Cooper, Philip J., Hokke, Cornelis H., Wuhrer, Manfred, and Yazdanbakhsh, Maria
- Subjects
Male ,0301 basic medicine ,Glycan ,Glycosylation ,Adolescent ,Inflammation ,Receptors, Fc ,Communicable Diseases ,Ghana ,Article ,Immunoglobulin G ,03 medical and health sciences ,Polysaccharides ,Germany ,Journal Article ,medicine ,Animals ,Humans ,Schistosomiasis ,Gabon ,Effector functions ,Child ,Receptor ,Netherlands ,Multidisciplinary ,biology ,Total ige ,Immunoglobulin E ,3. Good health ,carbohydrates (lipids) ,C-Reactive Protein ,030104 developmental biology ,Child, Preschool ,Immunology ,biology.protein ,Schistosoma ,Biomarker (medicine) ,Female ,lipids (amino acids, peptides, and proteins) ,Ecuador ,medicine.symptom ,Biomarkers ,Immune activation - Abstract
Immunoglobulin G (IgG) Fc N-glycosylation affects antibody-mediated effector functions and varies with inflammation rooted in both communicable and non-communicable diseases. Worldwide, communicable and non-communicable diseases tend to segregate geographically. Therefore, we studied whether IgG Fc N-glycosylation varies in populations with different environmental exposures in different parts of the world. IgG Fc N-glycosylation was analysed in serum/plasma of 700 school-age children from different communities of Gabon, Ghana, Ecuador, the Netherlands and Germany. IgG1 galactosylation levels were generally higher in more affluent countries and in more urban communities. High IgG1 galactosylation levels correlated with low total IgE levels, low C-reactive protein levels and low prevalence of parasitic infections. Linear mixed modelling showed that only positivity for parasitic infections was a significant predictor of reduced IgG1 galactosylation levels. That IgG1 galactosylation is a predictor of immune activation is supported by the observation that asthmatic children seemed to have reduced IgG1 galactosylation levels as well. This indicates that IgG1 galactosylation levels could be used as a biomarker for immune activation of populations, providing a valuable tool for studies examining the epidemiological transition from communicable to non-communicable diseases.
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- 2016
- Full Text
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127. Exposure to poor hygiene and early life infections and the risk of wheeze or asthma in Latin American children: a systematic review
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Ardura-Garcia, Cristina, Cooper, Philip J, and Garner, Paul
- Published
- 2015
- Full Text
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128. 168 - Ivermectin
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Cooper, Philip J. and Nutman, Thomas B.
- Published
- 2020
- Full Text
- View/download PDF
129. Whipworms in humans and pigs: origins and demography
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Hawash, Mohamed Bayoumi Fahmy, Betson, Martha, Al-Jubury, Azmi, Ketzis, Jennifer, LeeWillingham, Arve, Bertelsen, Mads Frost, Cooper, Philip J., Littlewood, D. Tim. J., Zhu, Xing-Quan, and Nejsum, Peter
- Subjects
Demographic history ,Whipworms ,Trichuris ,Infectious Diseases ,Evolution ,Humans ,Pigs ,Parasitology - Abstract
BACKGROUND: Trichuris suis and T. trichiura are two different whipworm species that infect pigs and humans, respectively. T. suis is found in pigs worldwide while T. trichiura is responsible for nearly 460 million infections in people, mainly in areas of poor sanitation in tropical and subtropical areas. The evolutionary relationship and the historical factors responsible for this worldwide distribution are poorly understood. In this study, we aimed to reconstruct the demographic history of Trichuris in humans and pigs, the evolutionary origin of Trichuris in these hosts and factors responsible for parasite dispersal globally.METHODS: Parts of the mitochondrial nad1 and rrnL genes were sequenced followed by population genetic and phylogenetic analyses. Populations of Trichuris examined were recovered from humans (n = 31), pigs (n = 58) and non-human primates (n = 49) in different countries on different continents, namely Denmark, USA, Uganda, Ecuador, China and St. Kitts (Caribbean). Additional sequences available from GenBank were incorporated into the analyses.RESULTS: We found no differentiation between human-derived Trichuris in Uganda and the majority of the Trichuris samples from non-human primates suggesting a common African origin of the parasite, which then was transmitted to Asia and further to South America. On the other hand, there was no differentiation between pig-derived Trichuris from Europe and the New World suggesting dispersal relates to human activities by transporting pigs and their parasites through colonisation and trade. Evidence for recent pig transport from China to Ecuador and from Europe to Uganda was also observed from their parasites. In contrast, there was high genetic differentiation between the pig Trichuris in Denmark and China in concordance with the host genetics.CONCLUSIONS: We found evidence for an African origin of T. trichiura which were then transmitted with human ancestors to Asia and further to South America. A host shift to pigs may have occurred in Asia from where T. suis seems to have been transmitted globally by a combination of natural host dispersal and anthropogenic factors.
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- 2016
- Full Text
- View/download PDF
130. Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch‐degrader Ruminococcus bromii
- Author
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Mukhopadhya, Indrani, primary, Moraïs, Sarah, additional, Laverde‐Gomez, Jenny, additional, Sheridan, Paul O., additional, Walker, Alan W., additional, Kelly, William, additional, Klieve, Athol V., additional, Ouwerkerk, Diane, additional, Duncan, Sylvia H., additional, Louis, Petra, additional, Koropatkin, Nicole, additional, Cockburn, Darrell, additional, Kibler, Ryan, additional, Cooper, Philip J., additional, Sandoval, Carlos, additional, Crost, Emmanuelle, additional, Juge, Nathalie, additional, Bayer, Edward A., additional, and Flint, Harry J., additional
- Published
- 2017
- Full Text
- View/download PDF
131. Comparison of Cytokine Responses in Ecuadorian Children Infected with Giardia, Ascaris, or Both Parasites
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Weatherhead, Jill, primary, Vaca, Maritza, additional, Cooper, Philip J., additional, Cortés, Andrea Arévalo, additional, Chico, Martha, additional, Sandoval, Carlos, additional, Mejia, Rojelio, additional, and Loor, Sophia, additional
- Published
- 2017
- Full Text
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132. Cohort Profile: The Ecuador Life (ECUAVIDA) study in Esmeraldas Province, Ecuador
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Cooper, Philip J, Chico, Martha E, Platts-Mills, Thomas Ae, Rodrigues, Laura C, Strachan, David P, and Barreto, Mauricio L
- Subjects
Adult ,Hypersensitivity, Immediate ,Male ,Rural Population ,Eczema ,Helminthiasis ,Young Adult ,Pregnancy ,Surveys and Questionnaires ,Helminth ,Humans ,Prospective Studies ,Child ,Cohort Profiles ,Skin Tests ,Allergic Diseases ,Infant, Newborn ,Infant ,Environmental Exposure ,Asthma ,Immunity, Innate ,Microbial Exposures ,Child, Preschool ,Pregnancy Complications, Parasitic ,Female ,Ecuador - Abstract
Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2015-06-11T17:27:14Z No. of bitstreams: 1 Mauricio Lima. 2014.pdf: 1013895 bytes, checksum: 049178f11b0a0acea7bc1bf41a3008c7 (MD5) Made available in DSpace on 2015-06-11T17:27:14Z (GMT). No. of bitstreams: 1 Mauricio Lima. 2014.pdf: 1013895 bytes, checksum: 049178f11b0a0acea7bc1bf41a3008c7 (MD5) Previous issue date: 2014-07 The ECUAVIDA birth cohort is studying the impact of exposures to soil-transmitted helminth (STH) parasites and early-life microbial exposures on the development of atopy, allergic diseases and immune responses in childhood. A total of 2404 newborns were recruited between 2006 and 2009 in a public hospital serving the rural district of Quininde, Esmeraldas Province, in a tropical region of coastal Ecuador. Detailed measurements were done around the time of the birth, at 7 and 13 months and at 2 and 3 years, and data collection is ongoing at 5 and 8 years. Data being collected include questionnaires for: sociodemographic, lifestyle, psychosocial (at 4-6 years only) and dietary (at 6-7 years only) factors; childhood morbidity and clinical outcomes; stool samples for parasites; blood samples for DNA, measurements of vaccine responses and other measures of immune function/inflammation; and anthropometrics. Allergen skin prick test reactivity is done from 2 years and measures of airway function and inflammation at 8 years. London
- Published
- 2015
133. Thorax
- Author
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Cooper, Philip J., Vaca-Martínez, Gioconda Maritza, Rodriguez, Alejandro, Chico, Martha E., Santos, D. N., Rodrigues, Laura C., and Barreto, Mauricio Lima
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Wheeze-Rhinitis-Eczema ,Atopy ,Farming ,Urban-Rural ,Hygiene - Abstract
Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2015-05-28T13:00:14Z No. of bitstreams: 1 Barreto. 2014.pdf: 335655 bytes, checksum: 77a4aa35068cbe90207abc0a1bc0b559 (MD5) Made available in DSpace on 2015-05-28T13:00:14Z (GMT). No. of bitstreams: 1 Barreto. 2014.pdf: 335655 bytes, checksum: 77a4aa35068cbe90207abc0a1bc0b559 (MD5) BACKGROUND: Rural residence is protective against atopy and wheeze-rhinitis-eczema symptoms in developed countries, an effect attributed to farming and poor hygiene exposures. There are few data from developing countries addressing this question. We compared atopy and wheeze-rhinitis-eczema symptoms between urban and rural Ecuador, and explored the effects of farming and poor hygiene exposures. METHODS: We performed cross sectional studies of schoolchildren living in rural and urban Ecuador. Data on symptoms and farming/hygiene exposures were collected by parental questionnaire, atopy by allergen skin prick test reactivity and geohelminth infections by stool examinations. RESULTS: Among 2526 urban and 4295 rural schoolchildren, prevalence was: atopy (10.0% vs 12.5%, p=0.06), wheeze (9.4% vs 10.1%, p=0.05), rhinitis (8.1% vs 6.4%, p=0.02) and eczema (5.9% vs 4.7%, p=0.06). A small proportion of symptoms were attributable to atopy (range 3.9-10.7%) with greater attributable fractions for respiratory symptoms observed in urban schoolchildren. Respiratory symptoms were associated with poor hygiene/farming exposures: wheeze with lack of access to potable water; and rhinitis with household pets, no bathroom facilities and contact with large farm animals. Birth order was inversely associated with respiratory symptoms. Area of residence and atopy had few effects on these associations. CONCLUSIONS: Urban schoolchildren living in Ecuador have a similar prevalence of atopy, eczema and wheeze but a higher prevalence of rhinitis compared with rural children. Some farming and poor hygiene exposures were associated with an increase in the prevalence of wheeze or rhinitis while birth order was inversely associated with these symptoms. New York
- Published
- 2015
134. Environ. Health
- Author
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Rodriguez, Alejandro, Vaca-Martínez, Gioconda Maritza, Chico, Martha E., Rodrigues, Laura C., Barreto, Mauricio Lima, and Cooper, Philip J.
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Male ,Rural Population ,Lifestyle domains ,Adolescent ,Urban Population ,Health, Toxicology and Mutagenesis ,Schoolchildren ,Surveys and Questionnaires ,Prevalence ,Urban ,Humans ,Rural ,Child ,Developing Countries ,Respiratory Sounds ,Tropics ,Age Factors ,Public Health, Environmental and Occupational Health ,Hypothesis ,Asthma ,Wheeze ,Latin America ,Cross-Sectional Studies ,Socioeconomic Factors ,Child, Preschool ,Female ,Ecuador ,Sedentary Behavior - Abstract
Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2016-05-09T18:35:01Z No. of bitstreams: 1 Art Per Estrang Mauricio Barreto5. 2015.pdf: 786011 bytes, checksum: fd71bec3b974a09eb55081da8a1a0714 (MD5) Made available in DSpace on 2016-05-09T18:35:01Z (GMT). No. of bitstreams: 1 Art Per Estrang Mauricio Barreto5. 2015.pdf: 786011 bytes, checksum: fd71bec3b974a09eb55081da8a1a0714 (MD5) Previous issue date: 2015 Background: The acquisition of a modern lifestyle may explain variations in asthma prevalence between urban and rural areas in developing countries. However, the effects of lifestyle on asthma have been investigated as individual factors with little consideration given to the effects of lifestyle as a set of attributes. The aim of the present study was to identify modern lifestyle domains and assess how these domains might explain wheeze prevalence in urban and rural areas. Methods: We analysed data from cross-sectional studies of urban and rural schoolchildren in Esmeraldas Province, Ecuador. Variables were grouped as indicators of socioeconomic factors, sedentarism, agricultural activities and household characteristics to represent the main lifestyle features of the study population. We used multiple correspondence analyses to identify common lifestyle domains and cluster analysis to allocate children to each domain. We evaluated associations between domains and recent wheeze by logistic regression. Results: We identified 2–3 lifestyle domains for each variable group. Although wheeze prevalence was similar in urban (9.4%) and rural (10.3%) schoolchildren, lifestyle domains presented clear associations with wheeze prevalence. Domains relating to home infrastructure (termed transitional, rudimentary, and basic urban) had the strongest overall effect on wheeze prevalence in both urban (rudimentary vs. basic urban, OR = 2.38, 95% CI 1.12-5.05, p = 0.024) and rural areas (transitional vs. basic urban, OR = 2.02, 95% CI 1.1-3.73, p = 0.024; rudimentary vs. basic urban, OR = 1.88, 95% CI 1.02-3.47, p = 0.043). A high level of sedentarism was associated with wheeze in the rural areas only (OR = 1.64, 95% CI 1.23-2.18, p = 0.001). Conclusions: We identified lifestyle domains associated with wheeze prevalence, particularly living in substandard housing and a high level of sedentarism. Such factors could be modified through programmes of improved housing and education. The use of lifestyle domains provides an alternative methodology for the evaluation of variations in wheeze prevalence in populations with different levels of development. London
- Published
- 2015
135. Cohort Profile: the Ecuador Life (ECUAVIDA) study in Esmeraldas Province, Ecuador
- Author
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Cooper, Philip J., Chico, Martha E., Platts-Mills, Thomas A. E., Rodrigues, Laura C., Strachan, David P., and Barreto, Mauricio Lima
- Subjects
Allergic Diseases ,Microbial Exposures ,Helminth - Abstract
Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2015-06-11T17:27:14Z No. of bitstreams: 1 Mauricio Lima. 2014.pdf: 1013895 bytes, checksum: 049178f11b0a0acea7bc1bf41a3008c7 (MD5) Made available in DSpace on 2015-06-11T17:27:14Z (GMT). No. of bitstreams: 1 Mauricio Lima. 2014.pdf: 1013895 bytes, checksum: 049178f11b0a0acea7bc1bf41a3008c7 (MD5) Previous issue date: 2014-07 The ECUAVIDA birth cohort is studying the impact of exposures to soil-transmitted helminth (STH) parasites and early-life microbial exposures on the development of atopy, allergic diseases and immune responses in childhood. A total of 2404 newborns were recruited between 2006 and 2009 in a public hospital serving the rural district of Quininde, Esmeraldas Province, in a tropical region of coastal Ecuador. Detailed measurements were done around the time of the birth, at 7 and 13 months and at 2 and 3 years, and data collection is ongoing at 5 and 8 years. Data being collected include questionnaires for: sociodemographic, lifestyle, psychosocial (at 4-6 years only) and dietary (at 6-7 years only) factors; childhood morbidity and clinical outcomes; stool samples for parasites; blood samples for DNA, measurements of vaccine responses and other measures of immune function/inflammation; and anthropometrics. Allergen skin prick test reactivity is done from 2 years and measures of airway function and inflammation at 8 years. London
- Published
- 2014
136. Risk factors for soil-transmitted helminth infections during the first 3 years of life in the tropics; findings from a birth cohort
- Author
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Menzies, Stefanie K., Rodriguez, Alejandro, Chico, Martha, Sandoval, Carlos, Broncano, Nely, Guadalupe, Irene, and Cooper, Philip J.
- Subjects
Male ,lcsh:Arctic medicine. Tropical medicine ,Infectious Disease Control ,Epidemiology ,lcsh:RC955-962 ,Helminthiasis ,Helminth Infection ,Soil-Transmitted Helminths ,Infectious Disease Epidemiology ,wa_110 ,Cohort Studies ,Feces ,Soil ,qx_200 ,Risk Factors ,Parasitic Diseases ,Humans ,Trichuriasis ,ws_430 ,Ascariasis ,wa_30 ,lcsh:Public aspects of medicine ,Infant, Newborn ,Infant ,lcsh:RA1-1270 ,wc_698 ,Infectious Diseases ,Logistic Models ,Child, Preschool ,Medicine ,Female ,Ecuador ,Parasitic Intestinal Diseases ,Research Article ,Neglected Tropical Diseases - Abstract
Background Soil-transmitted helminths (STH) infect more than 2 billion humans worldwide, causing significant morbidity in children. There are few data on the epidemiology and risk factors for infection in pre-school children. To investigate risk factors for infection in early childhood, we analysed data prospectively collected in the ECUAVIDA birth cohort in Ecuador. Methods and Findings Children were recruited at birth and followed up to 3 years of age with periodic collection of stool samples that were examined microscopically for STH parasites. Data on social, demographic, and environmental risk factors were collected from the mother at time of enrolment. Associations between exposures and detection of STH infections were analysed by multivariable logistic regression. Data were analysed from 1,697 children for whom a stool sample was obtained at 3 years. 42.3% had at least one STH infection in the first 3 years of life and the most common infections were caused by A. lumbricoides (33.2% of children) and T. trichiura (21.2%). Hookworm infection was detected in 0.9% of children. Risk of STH infection was associated with factors indicative of poverty in our study population such as Afro-Ecuadorian ethnicity and low maternal educational level. Maternal STH infections during pregnancy were strong risk factors for any childhood STH infection, infections with either A. lumbricoides or T. trichiura, and early age of first STH infection. Children of mothers with moderate to high infections intensities with A. lumbricoides were most at risk. Conclusions Our data show high rates of infection with STH parasites during the first 3 years of life in an Ecuadorian birth cohort, an observation that was strongly associated with maternal STH infections during pregnancy. The targeted treatment of women of childbearing age, in particular before pregnancy, with anthelmintic drugs could offer a novel approach to the prevention of STH infections in pre-school children., Author Summary Soil-transmitted helminths (STH) are intestinal worms that cause significant morbidity in school age and pre-school children in developing countries. Infections are associated with poverty, particularly through lack of access to sanitation and clean drinking water. Current control strategies rely on periodic anthelmintic treatment of schoolchildren but new strategies are required for STH control in young children. There are few data on modifiable risk factors in pre-school children. We investigated environmental and socioeconomic risk factors for STH infection in the first 3 years of life in a birth cohort from an STH-endemic region of Latin America. Our data provide evidence that maternal STH infections documented during pregnancy are an important risk factor for infection in young children, raising the possibility of a novel intervention for the prevention of STH-associated morbidity in early childhood through the deworming of women of childbearing age, in particular before pregnancy.
- Published
- 2014
137. Influence of the Damage Partition Function on the Uncertainty of the Silicon Displacement Damage Metric
- Author
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Griffin, Patrick J., primary and Cooper, Philip J., additional
- Published
- 2017
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138. IgG1 Fc N-glycan galactosylation as a biomarker for immune activation
- Author
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MS Dermatologie/Allergologie, Infection & Immunity, De Jong, Sanne E., Selman, Maurice H J, Adegnika, Ayola A., Amoah, Abena S., Van Riet, Elly, Kruize, Yvonne C M, Raynes, John G., Rodriguez, Alejandro, Boakye, Daniel, Von Mutius, Erika, Knulst, André C., Genuneit, Jon, Cooper, Philip J., Hokke, Cornelis H., Wuhrer, Manfred, Yazdanbakhsh, Maria, MS Dermatologie/Allergologie, Infection & Immunity, De Jong, Sanne E., Selman, Maurice H J, Adegnika, Ayola A., Amoah, Abena S., Van Riet, Elly, Kruize, Yvonne C M, Raynes, John G., Rodriguez, Alejandro, Boakye, Daniel, Von Mutius, Erika, Knulst, André C., Genuneit, Jon, Cooper, Philip J., Hokke, Cornelis H., Wuhrer, Manfred, and Yazdanbakhsh, Maria
- Published
- 2016
139. Whipworms in humans and pigs:origins and demography
- Author
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Hawash, Mohamed Bayoumi Fahmy, Betson, Martha, Al-Jubury, Azmi, Ketzis, Jennifer, LeeWillingham, Arve, Bertelsen, Mads Frost, Cooper, Philip J., Littlewood, D. Tim. J., Zhu, Xing-Quan, Nejsum, Peter, Hawash, Mohamed Bayoumi Fahmy, Betson, Martha, Al-Jubury, Azmi, Ketzis, Jennifer, LeeWillingham, Arve, Bertelsen, Mads Frost, Cooper, Philip J., Littlewood, D. Tim. J., Zhu, Xing-Quan, and Nejsum, Peter
- Abstract
BACKGROUND: Trichuris suis and T. trichiura are two different whipworm species that infect pigs and humans, respectively. T. suis is found in pigs worldwide while T. trichiura is responsible for nearly 460 million infections in people, mainly in areas of poor sanitation in tropical and subtropical areas. The evolutionary relationship and the historical factors responsible for this worldwide distribution are poorly understood. In this study, we aimed to reconstruct the demographic history of Trichuris in humans and pigs, the evolutionary origin of Trichuris in these hosts and factors responsible for parasite dispersal globally.METHODS: Parts of the mitochondrial nad1 and rrnL genes were sequenced followed by population genetic and phylogenetic analyses. Populations of Trichuris examined were recovered from humans (n = 31), pigs (n = 58) and non-human primates (n = 49) in different countries on different continents, namely Denmark, USA, Uganda, Ecuador, China and St. Kitts (Caribbean). Additional sequences available from GenBank were incorporated into the analyses.RESULTS: We found no differentiation between human-derived Trichuris in Uganda and the majority of the Trichuris samples from non-human primates suggesting a common African origin of the parasite, which then was transmitted to Asia and further to South America. On the other hand, there was no differentiation between pig-derived Trichuris from Europe and the New World suggesting dispersal relates to human activities by transporting pigs and their parasites through colonisation and trade. Evidence for recent pig transport from China to Ecuador and from Europe to Uganda was also observed from their parasites. In contrast, there was high genetic differentiation between the pig Trichuris in Denmark and China in concordance with the host genetics.CONCLUSIONS: We found evidence for an African origin of T. trichiura which were then transmitted with human ancestors to Asia and further to South
- Published
- 2016
140. Data on prevalence and risk factors associated with Toxocara spp infection, atopy and asthma development in Northeast Brazilian school children
- Author
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Silva, Márcia B., primary, Amor, Ana L.M., additional, Santos, Leonardo N., additional, Galvão, Alana A., additional, Oviedo V, Aida Y., additional, Silva, Eduardo S., additional, Barbosa, Cynara Gomes, additional, Cooper, Philip J., additional, Figueiredo, Camila A., additional, Ribeiro, Rita de Cassia, additional, and Alcântara-Neves, Neuza Maria, additional
- Published
- 2016
- Full Text
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141. Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
- Author
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Genser, Bernd, primary, Fischer, Joachim E., additional, Figueiredo, Camila A., additional, Alcântara-Neves, Neuza, additional, Barreto, Mauricio L., additional, Cooper, Philip J., additional, Amorim, Leila D., additional, Saemann, Marcus D., additional, Weichhart, Thomas, additional, and Rodrigues, Laura C., additional
- Published
- 2016
- Full Text
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142. Effects of maternal geohelminth infections on allergy in early childhood
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Cooper, Philip J., primary, Chico, Martha E., additional, Amorim, Leila D., additional, Sandoval, Carlos, additional, Vaca, Maritza, additional, Strina, Agostino, additional, Campos, Ana Clara, additional, Rodrigues, Laura C., additional, Barreto, Mauricio L., additional, and Strachan, David P., additional
- Published
- 2016
- Full Text
- View/download PDF
143. Maternal Helminth Infection Is Associated With Higher Infant Immunoglobulin A Titers to Antigen in Orally Administered Vaccines
- Author
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Clark, Carolyn E., primary, Fay, Michael P., additional, Chico, Martha E., additional, Sandoval, Carlos A., additional, Vaca, Maritza G., additional, Boyd, Alexis, additional, Cooper, Philip J., additional, and Nutman, Thomas B., additional
- Published
- 2016
- Full Text
- View/download PDF
144. Chapter 1 - Immunology of Ascaris and Immunomodulation
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Cooper, Philip J. and Figuieredo, Camila A.
- Published
- 2013
- Full Text
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145. Risk factors for non-atopic asthma/wheeze in children and adolescents: a systematic review
- Author
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Strina, Agostino, Barreto, Mauricio Lima, Cooper, Philip J., and Rodrigues, Laura C.
- Subjects
Risk Factors ,Non-Atopic Asthma ,Respiratory Infections ,Non-Atopic Wheeze ,Mould - Abstract
Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2015-06-09T13:45:01Z No. of bitstreams: 1 Strina A. 2014.pdf: 465732 bytes, checksum: 3b5011498b91f1e43a44bfe7561126ac (MD5) Made available in DSpace on 2015-06-09T13:45:01Z (GMT). No. of bitstreams: 1 Strina A. 2014.pdf: 465732 bytes, checksum: 3b5011498b91f1e43a44bfe7561126ac (MD5) Previous issue date: 2014 Background: The study of non-atopic asthma/wheeze in children separately from atopic asthma is relatively recent. Studies have focused on single risk factors and had inconsistent findings. Objective: To review evidence on factors associated with non-atopic asthma/wheeze in children and adolescents. Methods: A review of studies of risk factors for non-atopic asthma/wheeze which had a non-asthmatic comparison group, and assessed atopy by skin-prick test or allergen-specific IgE. Results: Studies of non-atopic asthma/wheeze used a wide diversity of definitions of asthma/wheeze, comparison groups and methods to assess atopy. Among 30 risk factors evaluated in the 43 studies only 3 (family history of asthma/rhinitis/eczema, dampness/mold in the household, and lower respiratory tract infections in childhood)showed consistent associations with non-atopic asthma/wheeze. No or limited period of breastfeeding was less consistently associated with non-atopic asthma/wheeze. The few studies examining the effects of overweight/obesity and psychological/social factors showed consistent associations. We used a novel graphical presentation of different risk factors for non-atopic asthma/wheeze, allowing a more complete perception of the complex pattern of effects. Conclusions: More research using standardized methodology is needed on the causes of non-atopic asthma. London
- Published
- 2014
146. Effect of urban vs. rural residence on the association between atopy and wheeze in Latin America: findings from a case – control analysis
- Author
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Endara, Pablo, Vaca-Martínez, Gioconda Maritza, Platts-Mills, Thomas A. E., Barreto, Mauricio Lima, Rodrigues, Laura C., and Cooper, Philip J.
- Subjects
Wheeze ,Latin America ,Atopy ,House Dust Mite ,Tropics ,Urban ,Rural ,Geohelminths - Abstract
Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2015-06-09T13:13:28Z No. of bitstreams: 1 Mauricio Barreto 2014.pdf: 194088 bytes, checksum: 0a9d906576db3dbcd34d10b0249c4a7f (MD5) Made available in DSpace on 2015-06-09T13:13:28Z (GMT). No. of bitstreams: 1 Mauricio Barreto 2014.pdf: 194088 bytes, checksum: 0a9d906576db3dbcd34d10b0249c4a7f (MD5) Previous issue date: 2014 BACKGROUND: The association between atopy and asthma is attenuated in non-affluent populations, an effect that may be explained by childhood infections such as geohelminths. OBJECTIVE: To investigate the association between atopy and wheeze in schoolchildren living in urban and rural areas of Ecuador and examine the effects of geohelminths on this association. METHODS: We performed nested case-control studies among comparable populations of schoolchildren living in rural communities and urban neighbourhoods in the Province of Esmeraldas, Ecuador. We detected geohelminths in stool samples, measured recent wheeze and environmental exposures by parental questionnaire, and atopy by specific IgE (sIgE) and skin prick test (SPT) reactivity to aeroallergens. RESULTS: Atopy, particularly sIgE to house dust mite (HDM), was more strongly associated with recent wheeze in urban than rural schoolchildren: (urban, adj. OR 5.19, 95% CI 3.37-8.00, P < 0.0001; rural, adj. OR 1.81, 95%CI 1.09-2.99, P = 0.02; interaction, P < 0.001). The population fractions of wheeze attributable to atopy were approximately two-fold greater in urban schoolchildren: SPT to any allergen (urban 23.5% vs. rural 10.1%), SPT to HDM (urban 18.5% vs. rural 9.6%), and anti-HDM IgE (urban 26.5% vs. rural 10.5%), while anti-Ascaris IgE was related to wheeze in a high proportion of rural (49.7%) and urban (35.4%) children. The association between atopy and recent wheeze was attenuated by markers of geohelminth infections. CONCLUSIONS: Our data suggest that urban residence modifies the association between HDM atopy and recent wheeze, and this effect is explained partly by geohelminth infections. London
- Published
- 2014
147. Effect of Early-Life Geohelminth Infections on the Development of Wheezing at 5 Years of Age.
- Author
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Cooper, Philip J., Chico, Martha E., Vaca, Maritza G., Sandoval, Carlos A., Loor, Sofia, Amorim, Leila D., Rodrigues, Laura C., Barreto, Mauricio L., and Strachan, David P.
- Published
- 2018
- Full Text
- View/download PDF
148. Journal of Allergy and Clinical Immunology
- Author
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Figueiredo, Camila Alexandrina, Amorim, Leila Denise Alves Ferreira, Alcântara-Neves, Neuza Maria, Matos, Sheila Maria Alvim de, Cooper, Philip J., Rodrigues, Laura C., and Barreto, Mauricio Lima
- Subjects
children ,LCA ,SCAALA ,infections ,environment ,immune phenotypes ,hygiene hypothesis - Abstract
Texto completo. Acesso restrito. p. 1064-1068 Submitted by Santiago Fabio (fabio.ssantiago@hotmail.com) on 2013-06-17T13:32:37Z No. of bitstreams: 1 22222222222.pdf: 154786 bytes, checksum: 0e61d96490c243a4bed35abd60aa18ea (MD5) Made available in DSpace on 2013-06-17T13:32:37Z (GMT). No. of bitstreams: 1 22222222222.pdf: 154786 bytes, checksum: 0e61d96490c243a4bed35abd60aa18ea (MD5) Previous issue date: 2013 Background It has been proposed that improved hygiene and reduced experience of infections in childhood influences the development of allergic diseases. The mechanisms by which the hygiene operates are not well established but are underpinned by two apparently incompatible immunologic paradigms, the balance of TH1 versus TH2 cytokines and IL-10–mediated regulation of TH2 cytokines. Objective This study defined immunologic phenotypes with the use of latent class analysis and investigated their associations with environmental factors, markers of allergy and asthma, in a Latin American population. Methods We studied 1127 children living in urban Brazil. Data on wheeze and environmental exposures were collected with standardized questionnaires. Atopy was measured by specific IgE in serum and skin prick test reactivity to aeroallergens. Cytokines were measured in culture after the stimulation of peripheral blood leukocytes with mitogen. Infections with pathogens were assessed by serology and stool examinations. Children were classified as having high or low burden of infection. Latent class analysis was used to identify immune phenotypes on the basis of cytokine production. Logistic regression was used to evaluate the adjusted effects of environment and burden of infection on the immunologic phenotypes and the effect of the phenotypes on atopy and asthma. Results Three phenotypes were identified, labeled underresponsive, intermediate, and responsive. Children of more educated mothers, living in improved environmental conditions, and with a low burden of infection were significantly more likely to have the responsive phenotype. The responsive phenotype was significantly associated with an increased prevalence of atopy but not asthma. Conclusion Our findings contribute to a better understanding of the immune mechanisms by which the hygiene hypothesis operates in urban Latin America. Salvador
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- 2013
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149. 112 - Onchocerciasis
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Cooper, Philip J and Nutman, Thomas B
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- 2012
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150. Galactose-α-1,3-Galactose–Specific IgE Is Associated with Anaphylaxis but Not Asthma
- Author
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Cooper, Philip J., Woodfolk, Judith A., Hoskins, Janelle M., Lundbäck, Bo, Commins, Scott P., McBride, Dane C., Peters, Edward J., Nganga, Lucy W., Matos, Luis A., James, Hayley R., Perzanowski, Matthew S., Rönmark, Eva, Eapen, Saju S., Kelly, Libby A., Platts-Mills, Thomas A. E., Heymann, Peter W., and Pochan, Shawna L.
- Abstract
Rationale: IgE antibodies to the mammalian oligosaccharide galactose-α-1,3-galactose (α-gal) are common in the southeastern United States. These antibodies, which are induced by ectoparasitic ticks, can give rise to positive skin tests or serum assays with cat extract.
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- 2012
- Full Text
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