626 results on '"Cytoplasmic streaming"'
Search Results
2. Induction Changes of Chlorophyll Fluorescence in Chara Cells Related to Metabolite Exchange between Chloroplasts and Cytoplasmic Flow
- Author
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Alexander A. Bulychev
- Subjects
Chara ,biology ,Chemistry ,Biophysics ,Cell Biology ,biology.organism_classification ,Photosynthesis ,Biochemistry ,Chloroplast membrane ,Cytoplasmic streaming ,Chloroplast ,Cytoplasm ,Electrochemical gradient ,Chlorophyll fluorescence - Abstract
Induction changes in chlorophyll fluorescence are associated with photosynthetic electron transfer, generation of the transmembrane proton gradient, and production of carbohydrates in the CO2 fixation cycle. The reactions of photosynthesis are also accompanied by the outflow of photoproducts from illuminated chloroplasts and their long-distance transport. The exchange of metabolites across the chloroplast envelope membranes is carried out by transporters that are active in the light and cease to operate in darkness. Inactivation of light-dependent envelope transporters in Chara cells interrupts spatial signaling manifested as a transient fluorescence rise in response to illumination of a distant cell area. The dark adaptation was found to down-regulate the entry of metabolites from the streaming cytoplasm into shaded chloroplasts but had rather low influence on metabolite export from illuminated plastids. Fluorescence induction curves were quite sensitive to illumination or darkening of the sample area residing outside the region of photometric assay. The amplitude of slow fluorescence changes observed under dim illumination of the whole Chara internode was substantially larger than under narrow-field illumination of the fluorescence assay region. The results indicate that the slow increase in fluorescence during the induction period in characean cells results not only from photosynthetic activity of chloroplasts in the examined cell region but also from interactions between the analyzed and neighboring cell areas. When the cytoplasmic streaming was arrested by cytochalasin D, similar induction changes were induced by local and global illumination, indicating a disruption of long-range interactions. The results suggest that the liquid flow not only carries metabolites from illuminated to shaded cell parts but also facilitates the export of photometabolites from chloroplasts to the cytoplasm.
- Published
- 2021
3. Heterologous transformation of Camelina sativa with high-speed chimeric myosin XI-2 promotes plant growth and leads to increased seed yield
- Author
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Motoki Tominaga, Kohji Ito, and Zhongrui Duan
- Subjects
0106 biological sciences ,0303 health sciences ,biology ,fungi ,Camelina sativa ,food and beverages ,Brassicaceae ,Plant Science ,Genetically modified crops ,biology.organism_classification ,01 natural sciences ,Camelina ,Cytoplasmic streaming ,Cell biology ,03 medical and health sciences ,Transformation (genetics) ,Arabidopsis ,Myosin ,Agronomy and Crop Science ,030304 developmental biology ,010606 plant biology & botany ,Biotechnology - Abstract
Camelina sativa is a Brassicaceae oilseed plant used as a biotechnology platform for biofuel and healthy vegetable oil. As Camelina is closely related to the model plant Arabidopsis, the genetic tools of Arabidopsis are considered useful when applied to Camelina. Myosin XI-2 is one of the major motive forces driving cytoplasmic streaming in Arabidopsis. In our previous study, high-speed chimeric myosin XI-2, a myosin XI-2 artificially modified by genetically exchanging the motor domain of Arabidopsis myosin XI-2 with the faster Chara myosin XI, was shown to accelerate cytoplasmic streaming and promote plant growth in Arabidopsis. Here, we heterologously transformed this high-speed Chara-Arabidopsis chimeric myosin XI-2 gene in Camelina. The transgenic plants exhibited not only enhancement of leaf development and main stem elongation but also early flowering and seed setting, indicating that the high-speed chimeric myosin XI-2 can improve plant growth in Camelina. Interestingly, total seed yield was significantly increased in the transgenic plants as the total seed number increased. Our results suggest that the high-speed myosin XI system might also be effective to improve the growth of other closely related plant species.
- Published
- 2020
4. Cytoplasmic streaming drifts the polarity cue and enables posteriorization of the Caenorhabditis elegans zygote at the side opposite of sperm entry
- Author
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Akatsuki Kimura and Kenji Kimura
- Subjects
0303 health sciences ,Zygote ,biology ,Pronucleus ,Cell Biology ,Articles ,biology.organism_classification ,Cell biology ,Cytoplasmic streaming ,03 medical and health sciences ,0302 clinical medicine ,Sperm entry ,Centrosome ,Cell polarity ,Cell cortex ,Molecular Biology ,030217 neurology & neurosurgery ,Caenorhabditis elegans ,Cytoskeleton ,030304 developmental biology - Abstract
Cell polarization is required to define body axes during development. The position of spatial cues for polarization is critical to direct the body axes. In Caenorhabditis elegans zygotes, the sperm-derived pronucleus/centrosome complex (SPCC) serves as the spatial cue to specify the anterior-posterior axis. Approximately 30 min after fertilization, the contractility of the cell cortex is relaxed near the SPCC, which is the earliest sign of polarization and called symmetry breaking (SB). It is unclear how the position of SPCC at SB is determined after fertilization. Here, we show that SPCC drifts dynamically through the cell-wide flow of the cytoplasm, called meiotic cytoplasmic streaming. This flow occasionally brings SPCC to the opposite side of the sperm entry site before SB. Our results demonstrate that cytoplasmic flow determines stochastically the position of the spatial cue of the body axis, even in an organism like C. elegans for which development is stereotyped.
- Published
- 2020
5. Arabidopsis thaliana myosin XIK is recruited to the Golgi through interaction with a MyoB receptor
- Author
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Stanley W. Botchway, Hongbo Gao, Chiara Perico, Kate J. Heesom, and Imogen Sparkes
- Subjects
Cell biology ,QH301-705.5 ,Arabidopsis ,Myosin ,Golgi Apparatus ,Medicine (miscellaneous) ,Plant cell biology ,macromolecular substances ,Myosins ,Article ,General Biochemistry, Genetics and Molecular Biology ,symbols.namesake ,Organelle ,Biology (General) ,Golgi membrane ,biology ,Arabidopsis Proteins ,Chemistry ,Membrane Proteins ,Golgi apparatus ,Actin cytoskeleton ,biology.organism_classification ,Myosin complex ,Cytoplasmic streaming ,symbols ,Plant sciences ,General Agricultural and Biological Sciences ,Plant cytoskeleton - Abstract
Plant cell organelles are highly mobile and their positioning play key roles in plant growth, development and responses to changing environmental conditions. Movement is acto-myosin dependent. Despite controlling the dynamics of several organelles, myosin and myosin receptors identified so far in Arabidopsis thaliana generally do not localise to the organelles whose movement they control, raising the issue of how specificity is determined. Here we show that a MyoB myosin receptor, MRF7, specifically localises to the Golgi membrane and affects its movement. Myosin XI-K was identified as a putative MRF7 interactor through mass spectrometry analysis. Co-expression of MRF7 and XI-K tail triggers the relocation of XI-K to the Golgi, linking a MyoB/myosin complex to a specific organelle in Arabidopsis. FRET-FLIM confirmed the in vivo interaction between MRF7 and XI-K tail on the Golgi and in the cytosol, suggesting that myosin/myosin receptor complexes perhaps cycle on and off organelle membranes. This work supports a traditional mechanism for organelle movement where myosins bind to receptors and adaptors on the organelle membranes, allowing them to actively move on the actin cytoskeleton, rather than passively in the recently proposed cytoplasmic streaming model., Perico et al. use co-expression analysis and a FRET-FLIM approach to show that the Arabidopsis MyoB myosin receptor, MRF7, triggers the relocation of Myosin XI-K to the Golgi. As such, this study provides evidence for plant myosin recruitment and control of organelle movement.
- Published
- 2021
6. Discovery of the fastest myosin, its amino acid sequence, and structural features
- Author
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Kano Suzuki, M. Tamanaha, Tomoaki Nishiyama, K. Yoshimura, Takeshi Murata, Kaoru Ito, Hidetoshi Sakayama, Motoki Tominaga, T. Imi, and Takeshi Haraguchi
- Subjects
Chara ,biology ,Chemistry ,High velocity ,Chara braunii ,Myosin ,Chara corallina ,Biophysics ,biology.organism_classification ,Peptide sequence ,Actin ,Cytoplasmic streaming - Abstract
Cytoplasmic streaming with extremely high velocity (~70 μm s−1) occurs in cells of the characean algae (Chara). Because cytoplasmic streaming is caused by organelle-associated myosin XI sliding along actin filaments, it has been suggested that a myosin XI, which has a velocity of 70 μm s−1, the fastest myosin measured so far, exists in Chara cells. However, the previously cloned Chara corallina myosin XI (CcXI) moved actin filaments at a velocity of around 20 μm s−1, suggesting that an unknown myosin XI with a velocity of 70 μm s−1 may be present in Chara. Recently, the genome sequence of Chara braunii has been published, revealing that this alga has four myosin XI genes. In the work reported in this paper, we cloned these four myosin XIs (CbXI-1, 2, 3, and 4) and measured their velocities. While the velocities of CbXI-3 and CbXI-4 were similar to that of CcXI, the velocities of CbXI-1 and CbXI-2 were estimated to be 73 and 66 μm s−1, respectively, suggesting that CbXI-1 and CbXI-2 are the main contributors to cytoplasmic streaming in Chara cells and showing that CbXI-1 is the fastest myosin yet found. We also report the first atomic structure (2.8 Å resolution) of myosin XI using X-ray crystallography. Based on this crystal structure and the recently published cryo-EM structure of acto-myosin XI at low resolution (4.3 Å), it appears that the actin-binding region contributes to the fast movement of Chara myosin XI. Mutation experiments of actin-binding surface loop 2 support this hypothesis.Significance statementIt has been suggested for more than 50 years that the fastest myosin in the biological world, with a velocity of 70 μm s−1, exists in the alga Chara because cytoplasmic streaming with a velocity of 70 μm s−1 occurs in Chara cells. However, a myosin with that velocity has not yet been identified. In this work, we succeeded in cloning a myosin XI with a velocity of 73 μm s−1, the fastest myosin so far measured. We also successfully crystallized myosin XI for the first time. Structural analyses and mutation experiments suggest that the central regions that define the fast movement of Chara myosin XI are the actin-binding sites.
- Published
- 2021
7. Cell size has gene expression and biophysical consequences for cellular function
- Author
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John A. Raven, Charles A. Knight, and John Beardall
- Subjects
biology ,Giant cell ,Ulvophyceae ,Gene expression ,Morphogenesis ,biology.organism_classification ,Cytoskeleton ,Function (biology) ,Cell biology ,Cell size ,Cytoplasmic streaming - Published
- 2019
8. ANGUSTIFOLIA Regulates Actin Filament Alignment for Nuclear Positioning in Leaves
- Author
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Tomoyuki Furuya, Yoichiro Fukao, Haruna Ohnishi, Ikuko Hara-Nishimura, Koro Hattori, Kosei Iwabuchi, Hirokazu Tsukaya, and Kentaro Tamura
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0106 biological sciences ,Pavement cells ,biology ,Physiology ,Chemistry ,Mutant ,Plant Science ,biology.organism_classification ,01 natural sciences ,Cell biology ,Cytoplasmic streaming ,Protein filament ,Arabidopsis ,Cell polarity ,Genetics ,Arabidopsis thaliana ,Actin ,010606 plant biology & botany - Abstract
During dark adaptation, plant nuclei move centripetally toward the midplane of the leaf blade; thus, the nuclei on both the adaxial and abaxial sides become positioned at the inner periclinal walls of cells. This centripetal nuclear positioning implies that a characteristic cell polarity exists within a leaf, but little is known about the mechanism underlying this process. Here, we show that ANGUSTIFOLIA (AN) and ACTIN7 regulate centripetal nuclear positioning in Arabidopsis (Arabidopsis thaliana) leaves. Two mutants defective in the positioning of nuclei in the dark were isolated and designated as unusual nuclear positioning1 (unp1) and unp2. In the dark, nuclei of unp1 were positioned at the anticlinal walls of adaxial and abaxial mesophyll cells and abaxial pavement cells, whereas the nuclei of unp2 were positioned at the anticlinal walls of mesophyll and pavement cells on both the adaxial and abaxial sides. unp1 was caused by a dominant-negative mutation in ACTIN7, and unp2 resulted from a recessive mutation in AN. Actin filaments in unp1 were fragmented and reduced in number, which led to pleiotropic defects in nuclear morphology, cytoplasmic streaming, and plant growth. The mutation in AN caused aberrant positioning of nuclei-associated actin filaments at the anticlinal walls. AN was detected in the cytosol, where it interacted physically with plant-specific dual-specificity tyrosine phosphorylation-regulated kinases (DYRKPs) and itself. The DYRK inhibitor (1Z)-1-(3-ethyl-5-hydroxy-2(3H)-benzothiazolylidene)-2-propanone significantly inhibited dark-induced nuclear positioning. Collectively, these results suggest that the AN-DYRKP complex regulates the alignment of actin filaments during centripetal nuclear positioning in leaf cells.
- Published
- 2018
9. Extensive tubular vacuole system in an arbuscular mycorrhizal fungus, Gigaspora margarita
- Author
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T. Kojima, Yukari Uetake, Tatsuhiro Ezawa, and Masanori Saito
- Subjects
Hypha ,biology ,Physiology ,fungi ,Germ tube ,Plant Science ,Vacuole ,biology.organism_classification ,Cytoplasmic streaming ,Arbuscular mycorrhiza ,Botany ,Biophysics ,Ultrastructure ,Mycorrhiza ,Phycomycetes - Abstract
Summary • A tubular vacuolar system is reported here for the first time in living hyphae of Gigaspora margarita, an arbuscular mycorrhizal fungus, during various phases in the development of a symbiotic relationship with onion (Allium cepa) seedlings. • Germ tubes, extraradical hyphae and intercellular hyphae were labeled with Oregon Green 488 carboxylic acid diacetate and observed by laser scanning confocal microscopy. Emphasis was placed on the relationship between the shape of vacuoles and the presence of cytoplasmic streaming. • In germ tubes, labeled vacuoles showed a variety of profiles, including spherical and tubular (
- Published
- 2021
10. Allicin From Garlic Disrupts the Cytoskeleton in Plants
- Author
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Schreiber M, Alan J. Slusarenko, Martin C.H. Gruhlke, Mertes Ca, Ulrike Noll, and Monika Hermanns
- Subjects
Allicin ,biology ,Chemistry ,Golgi apparatus ,biology.organism_classification ,Green fluorescent protein ,Cell biology ,Cytoplasmic streaming ,symbols.namesake ,chemistry.chemical_compound ,Arabidopsis ,symbols ,Cytoskeleton ,Thiosulfinate ,Actin - Abstract
Allicin is a defence substance produced by garlic cells upon injury. It is a thiosulfinate showing redox-activity and a broad range of antimicrobial and biocidal activity. It is known that allicin efficiently oxidizes thiol-groups and it has been described as a redox toxin. In order to learn more about the effect of allicin on plants we used pure synthetized allicin, and investigated cytoplasmic streaming in sterile filaments of Tradescantia fluminensis, organelle movement using transgenic Arabidopsis with organelle-specifics GFP-tags, and effects on actin and tubulin in the cytoskeleton using GFP-tagged lines. Auxin distribution in roots was investigated using PIN1:GFP, PIN3:GFP, DR5:GFP and DII-VENUS Arabidopsis reporter lines.Allicin inhibited cytoplasmic streaming in T. fluminensis and organelle movement of peroxisomes and the Golgi apparatus in a concentration-dependent manner, inhibited root growth and destroyed the correct root tip distribution of auxin.We speculate that the cytoskeleton can be a primary “receptor” for allicin’s oxidizing properties and as a consequence cytoskeleton-dependent cellular processes are disrupted.
- Published
- 2021
11. Going with the flow: insights from Caenorhabditis elegans zygote polarization
- Author
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Iolo Squires, John R. Packer, Alicia G. Gubieda, Josana Rodriguez, and Jack Martin
- Subjects
Physics ,Zygote ,Embryo, Nonmammalian ,biology ,Cell Polarity ,Articles ,Actomyosin ,Protein Serine-Threonine Kinases ,Polarization (waves) ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,Cell biology ,Cytoplasmic streaming ,Signalling ,Cell polarity ,Asymmetric cell division ,Asymmetric distribution ,Animals ,General Agricultural and Biological Sciences ,Caenorhabditis elegans ,Caenorhabditis elegans Proteins ,Body Patterning ,Signal Transduction - Abstract
Cell polarity is the asymmetric distribution of cellular components along a defined axis. Polarity relies on complex signalling networks between conserved patterning proteins, including the PAR (partitioning defective) proteins, which become segregated in response to upstream symmetry breaking cues. Although the mechanisms that drive the asymmetric localization of these proteins are dependent upon cell type and context, in many cases the regulation of actomyosin cytoskeleton dynamics is central to the transport, recruitment and/or stabilization of these polarity effectors into defined subcellular domains. The transport or advection of PAR proteins by an actomyosin flow was first observed in theCaenorhabditis elegans zygote more than a decade ago. Since then a multifaceted approach, using molecular methods, high-throughput screens, and biophysical and computational models, has revealed further aspects of this flow and how polarity regulators respond to and modulate it. Here, we review recent findings on the interplay between actomyosin flow and the PAR patterning networks in the polarization of theC. eleganszygote. We also discuss how these discoveries and developed methods are shaping our understanding of other flow-dependent polarizing systems.This article is part of a discussion meeting issue ‘Contemporary morphogenesis’.
- Published
- 2020
12. Motility: Life in Syrup
- Author
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Tom Fenchel and Genoveva F. Esteban
- Subjects
Food particles ,Cell division ,biology ,Protozoa ,Motility ,Water current ,biology.organism_classification ,Cytoplasmic streaming ,Cell biology - Abstract
All protozoa show some sort of motility: practically all forms move freely in the environment during at least some part of their life cycle. Even species that are normally sedentary show motility in the form of contraction or the ability to generate water currents from which food particles may be strained. All protozoa, of course, show a sort of motility during phagocytosis, during the process of “cyclosis” (the intracellular movement of food vacuoles and other organelles) and during cell division. These last-mentioned aspects of protozoan motility will receive little attention here. Instead, we will concentrate on swimming, the generation of feeding currents, creeping motility on surfaces, and, in a following chapter, motile behaviour that allows the organisms to orientate themselves with respect to environmental gradients of different sorts.
- Published
- 2020
13. Cytoplasmic streaming drifts the polarity cue and specifies the cell polarity in Caenorhabditis elegans zygotes
- Author
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Akatsuki Kimura and Kenji Kimura
- Subjects
Physics ,0303 health sciences ,biology ,Polarity (physics) ,biology.organism_classification ,Cytoplasmic streaming ,Cell biology ,03 medical and health sciences ,0302 clinical medicine ,Sperm entry ,Centrosome ,Cytoplasm ,Cell polarity ,Cell cortex ,030217 neurology & neurosurgery ,Caenorhabditis elegans ,030304 developmental biology - Abstract
Cell polarisation is required to define body axes during development. The position of spatial cues for polarisation is critical to direct the body axes. InCaenorhabditis eleganszygotes, the sperm-derived pronucleus/centrosome complex (SPCC) serves as the spatial cue to specify the anterior–posterior axis. Approximately 30 minutes after fertilisation, the contractility of the cell cortex is relaxed near the SPCC, which is the earliest sign of polarisation and called symmetry breaking (SB). It is unclear how the position of SPCC at SB is determined after fertilisation. Here, we show that SPCC drifts dynamically through the cell-wide flow of the cytoplasm, called meiotic cytoplasmic streaming. This flow occasionally brings SPCC to the opposite side of the sperm entry site before SB. Our results demonstrate that cytoplasmic flow determines stochastically the position of the spatial cue of the body axis, even in an organism likeC. elegansfor which development is stereotyped.
- Published
- 2019
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14. Intracellular trafficking and cytoplasmic streaming under abiotic stress conditions
- Author
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Anil Kumar Singh and Jeshima Khan Yasin
- Subjects
Budding ,biology ,Cytoplasm ,Chemistry ,Vesicle ,Arabidopsis ,fungi ,Vacuole ,biology.organism_classification ,Intracellular ,Green fluorescent protein ,Cell biology ,Cytoplasmic streaming - Abstract
Cytoplasmic streaming is one among the vital activities of the living cells. In plants cytolplasmic streaming could clearly be seen in hypocotyls of growing seedlings. To observe cytoplsmic streaming and its correlated intracellular trafficking an investigation was conducted in legumes in comparison with GFP-AtRab75 and 35S::GFP:δTIP tonoplast fusion protein expressing arabidopsis lines. These seedlings were observed under confocal microscopy with different buffer incubation treatments and under different stress conditions. GFP expressing 35S::GFP:δTIP tonoplast lines were looking similar to the control lines and differ under stress conditions. Movement of cytoplasmic invaginations within the tonoplast and cytoplasmic sub vesicle or bulb budding during cytoplasmic streaming was observed in hypocotyls of At-GFP tonoplast plants. We found the cytoplasmic bulbs/ vesicles or sub vesicle formation from the plasma membrane. The streaming speed also depends on the incubation medium in which the specimen was incubated, indicating that the external stimuli as well as internal stimuli can alter the speed of streaming
- Published
- 2019
15. Photoregulation of photosystem II activity mediated by cytoplasmic streaming in Chara and its relation to pH bands
- Author
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A.V. Komarova and Alexander A. Bulychev
- Subjects
0106 biological sciences ,0301 basic medicine ,Chloroplasts ,Light Signal Transduction ,Time Factors ,Light ,Photosystem II ,Biophysics ,Cytoplasmic Streaming ,Biology ,Photosynthesis ,Chara ,01 natural sciences ,Biochemistry ,03 medical and health sciences ,Organelle ,Chlorophyll fluorescence ,Photosystem II Protein Complex ,Cell Biology ,Hydrogen-Ion Concentration ,biology.organism_classification ,Cytoplasmic streaming ,Chloroplast ,030104 developmental biology ,Energy Transfer ,Cytoplasm ,Cytophotometry ,Protons ,010606 plant biology & botany - Abstract
Chloroplasts in vivo exposed to strong light export assimilates and excess reducing power to the cytoplasm for metabolic conversions and allocation to neighboring and distant organelles. The cytoplasmic streaming, being particularly fast in characean internodes, distributes the exported metabolites from brightly illuminated cell spots to light-limited regions, which is evident from the transient increase in chlorophyll fluorescence of shaded areas in response to illumination of distant cell regions situated upstream the liquid flow. It is not yet known whether long-distance communications between anchored chloroplasts are interfered by pH banding that commonly arises in characean internodes under the action of continuous or fluctuating light. In this study, microfluorometry, pH-microsensors, and local illumination were combined to examine long-distance transport and subsequent reentry of photosynthetic metabolites, including triose phosphates, into chloroplasts of cell regions producing external alkaline and acid bands. The lateral transmission of metabolic signals between distant chloroplasts was found to operate effectively in cell areas underlying acid zones but was almost fully blocked under alkaline zones. The rates of linear electron flow in chloroplasts of these regions were nearly equal under dim background light, but differed substantially at high light when availability of CO2, rather than irradiance, was the rate-limiting factor. Different productions of assimilates by chloroplasts underlying CO2-sufficient acid and CO2-deficient alkaline zones were a cause for contrasting manifestations of long-distance transport of photosynthetic metabolites. Nonuniform cytoplasmic pH in cells exhibiting pH bands might contribute to different activities of metabolic translocators under high and low pH zones.
- Published
- 2017
16. Wpływ temperatury na ruch plazmy u Elodea densa Casp. [The influnce of temperature on the protoplasmic streaming in Elodea densa Casp.]
- Author
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J. Zurzycki
- Subjects
biology ,Chemistry ,lcsh:Botany ,Botany ,Plant Science ,Elodea ,CASP ,biology.organism_classification ,Cytoplasmic streaming ,lcsh:QK1-989 - Published
- 2017
17. Endomembrane architecture and dynamics during secretion of the extracellular matrix of the unicellular charophyte, Penium margaritaceum
- Author
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Reagan Reed, Li Sun, David S. Domozych, Mingjia Li, Zhangjun Fei, Chen Jiao, Jocelyn K. C. Rose, Kattia Palacio-Lopez, Susan Jeon, and Iben Sørensen
- Subjects
Golgi body ,Physiology ,Charophyceae ,extracellular matrix ,Golgi Apparatus ,Plant Science ,tomography ,chemistry.chemical_compound ,symbols.namesake ,Cell Wall ,Chlorophyta ,Polysaccharides ,endomembrane system ,Endomembrane system ,Secretion ,biology ,AcademicSubjects/SCI01210 ,Brefeldin A ,Golgi apparatus ,biology.organism_classification ,Penium ,Research Papers ,Cytoplasmic streaming ,Cell biology ,chemistry ,Cytoplasm ,symbols ,Green algae ,Charophyte - Abstract
The extracellular matrix (ECM) of many charophytes, the assemblage of green algae that are the sister group to land plants, is complex, produced in large amounts, and has multiple essential functions. An extensive secretory apparatus and endomembrane system are presumably needed to synthesize and secrete the ECM, but structural details of such a system have not been fully characterized. Penium margaritaceum is a valuable unicellular model charophyte for studying secretion dynamics. We report that Penium has a highly organized endomembrane system, consisting of 150–200 non-mobile Golgi bodies that process and package ECM components into different sets of vesicles that traffic to the cortical cytoplasm, where they are transported around the cell by cytoplasmic streaming. At either fixed or transient areas, specific cytoplasmic vesicles fuse with the plasma membrane and secrete their constituents. Extracellular polysaccharide (EPS) production was observed to occur in one location of the Golgi body and sometimes in unique Golgi hybrids. Treatment of cells with brefeldin A caused disruption of the Golgi body, and inhibition of EPS secretion and cell wall expansion. The structure of the endomembrane system in Penium provides mechanistic insights into how extant charophytes generate large quantities of ECM, which in their ancestors facilitated the colonization of land., A layered endomembrane system consisting of linear rows of Golgi bodies and a peripheral vesicle network fuel the secretion of the complex extracellular matrix of the unicellular charophyte, Penium.
- Published
- 2019
18. What Drives Symbiotic Calcium Signalling in Legumes? Insights and Challenges of Imaging
- Author
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Valerie Livina and Teresa Vaz Martins
- Subjects
0106 biological sciences ,0301 basic medicine ,Root nodule ,legumes ,chemistry.chemical_element ,Review ,Root hair ,Calcium ,01 natural sciences ,Image recording ,Catalysis ,Inorganic Chemistry ,lcsh:Chemistry ,03 medical and health sciences ,Symbiosis ,Live cell imaging ,Ca2+ ,Calcium Signaling ,Physical and Theoretical Chemistry ,Molecular Biology ,lcsh:QH301-705.5 ,Spectroscopy ,Calcium signaling ,biology ,Chemistry ,Organic Chemistry ,imaging ,Fabaceae ,General Medicine ,biology.organism_classification ,symbiosis ,Computer Science Applications ,Cytoplasmic streaming ,Cell biology ,Signalling ,030104 developmental biology ,Microscopy, Fluorescence ,lcsh:Biology (General) ,lcsh:QD1-999 ,Rhizobium ,010606 plant biology & botany - Abstract
We review the contribution of bioimaging in building a coherent understanding of Ca 2 + signalling during legume-bacteria symbiosis. Currently, two different calcium signals are believed to control key steps of the symbiosis: a Ca 2 + gradient at the tip of the legume root hair is involved in the development of an infection thread, while nuclear Ca 2 + oscillations, the hallmark signal of this symbiosis, control the formation of the root nodule, where bacteria fix nitrogen. Additionally, different Ca 2 + spiking signatures have been associated with specific infection stages. Bioimaging is intrinsically a cross-disciplinary area that requires integration of image recording, processing and analysis. We used experimental examples to critically evaluate previously-established conclusions and draw attention to challenges caused by the varying nature of the signal-to-noise ratio in live imaging. We hypothesise that nuclear Ca 2 + spiking is a wide-range signal involving the entire root hair and that the Ca 2 + signature may be related to cytoplasmic streaming.
- Published
- 2019
19. Interchloroplast communications in Chara are suppressed under the alkaline bands and are relieved after the plasma membrane excitation
- Author
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Natalia A. Krupenina and Alexander A. Bulychev
- Subjects
Chloroplasts ,Light ,Biophysics ,Cytoplasmic Streaming ,02 engineering and technology ,Cell Communication ,Photosynthesis ,01 natural sciences ,Chara ,Electrochemistry ,Physical and Theoretical Chemistry ,Chlorophyll fluorescence ,biology ,Chemistry ,010401 analytical chemistry ,Cell Membrane ,General Medicine ,Hydrogen-Ion Concentration ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Electron transport chain ,0104 chemical sciences ,Cytoplasmic streaming ,Chloroplast ,Membrane ,Cytoplasm ,Protons ,0210 nano-technology - Abstract
Immobile chloroplasts in Chara internodal cells release photometabolites into the streaming cytoplasm that distributes the exported solutes and provides metabolic connectivity between spatially remote plastids. The metabolite transmission by fluid flow is evident from chlorophyll fluorescence changes in shaded chloroplasts upon local illumination applied upstream of the analyzed area. The connectivity correlates with the pH pattern on cell surface: it is strong in cell regions with high H+-pump activity and is low in regions featuring large passive H+ influx (OH– efflux). One explanation for low connectivity under the alkaline bands is that H+ influx lowers the cytoplasmic pH, thus retarding metabolic conversions of solutes carried by the microfluidic transporter. The cessation of H+ influx across the plasma membrane by eliciting the action potential and by adding NH4Cl into the medium greatly enhanced the amplitude of cyclosis-mediated fluorescence transients. The transition from latent to the transmissive state after the dark pretreatment was paralleled by the temporary increase in chlorophyll fluorescence, reflecting changes in photosynthetic electron transport. It is proposed that the connectivity between distant chloroplasts is controlled by cytoplasmic pH.
- Published
- 2019
20. Profiles of Physarum Microplasmodial Phosphatase Activity Crucial to Cytoplasmic Streaming and Spherule Formation
- Author
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Takako S Kaneko, Kyoko Ogawa, Kazuhiro Kohama, Chisa Y Okada, and Akio Nakamura
- Subjects
0301 basic medicine ,Phosphatase ,Biophysics ,Protozoan Proteins ,Cytoplasmic Streaming ,Physarum polycephalum ,Biochemistry ,Physarum ,03 medical and health sciences ,Complementary DNA ,Amino Acid Sequence ,Cloning, Molecular ,Phosphorylation ,Peptide sequence ,chemistry.chemical_classification ,Myosin Type II ,030102 biochemistry & molecular biology ,biology ,Chemistry ,fungi ,Cell Biology ,General Medicine ,biology.organism_classification ,Phosphoric Monoester Hydrolases ,Recombinant Proteins ,Amino acid ,Cytoplasmic streaming ,Open reading frame ,030104 developmental biology - Abstract
This study aimed to investigate for the first time, the profile of Physarum microplasmodial phosphatase (PPH) activity toward the phosphorylated light chain of Physarum myosin II (PLCM) at pH 7.6, the velocity of cytoplasmic streaming, and PPH expression in spherule formation during dark starvation (DS). In this study, we cloned the full-length cDNA of PPH using polymerase chain reaction, based on the N-terminal amino acid sequence of the purified enzyme. The cDNA contained an open reading frame (ORF) of 1245 bp, corresponding to 415 amino acids. We confirmed that a rapid increase in PPH activity toward PLCM and a rapid decrease in cytoplasmic streaming velocity precede spherule formation by Physarum microplasmodia. The profiles of increase in PPH activity toward PLCM, PPH expression, and PPH accumulation during DS were correlated with spherule formation in the Physarum microplasmodia. Moreover, application of the wheat germ cell-free expression system resulted in the successful production of recombinant PPH and in the expression of phosphatase activity toward PLCM. These results suggest that PPH is involved in the cessation of cytoplasmic streaming in Physarum microplasmodia during DS.
- Published
- 2019
21. Syncytial germline architecture is actively maintained by contraction of an internal actomyosin corset
- Author
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Ronen Zaidel-Bar, Agarwal Priti, Yusuke Toyama, Sabyasachi Dasgupta, Hui Ting Ong, Matej Krajnc, and Anup Padmanabhan
- Subjects
0301 basic medicine ,Contraction (grammar) ,Science ,Cytoplasmic Streaming ,General Physics and Astronomy ,Myosins ,Giant Cells ,Models, Biological ,Article ,General Biochemistry, Genetics and Molecular Biology ,Germline ,Membrane tension ,Contractility ,03 medical and health sciences ,Animals ,Caenorhabditis elegans ,Caenorhabditis elegans Proteins ,Gonads ,lcsh:Science ,Cytoskeleton ,Multidisciplinary ,biology ,Actomyosin ,General Chemistry ,biology.organism_classification ,Cell biology ,Germ Cells ,030104 developmental biology ,Actomyosin structure ,lcsh:Q ,Laser microsurgery - Abstract
Syncytial architecture is an evolutionarily-conserved feature of the germline of many species and plays a crucial role in their fertility. However, the mechanism supporting syncytial organization is largely unknown. Here, we identify a corset-like actomyosin structure within the syncytial germline of Caenorhabditis elegans, surrounding the common rachis. Using laser microsurgery, we demonstrate that actomyosin contractility within this structure generates tension both in the plane of the rachis surface and perpendicular to it, opposing membrane tension. Genetic and pharmacological perturbations, as well as mathematical modeling, reveal a balance of forces within the gonad and show how changing the tension within the actomyosin corset impinges on syncytial germline structure, leading, in extreme cases, to sterility. Thus, our work highlights a unique tissue-level cytoskeletal structure, and explains the critical role of actomyosin contractility in the preservation of a functional germline., Germline cells in many species are fused to form a syncytium but the mechanics behind the maintenance of these structures are poorly defined. Here, the authors propose an inner contractile actomyosin corset provides a supportive framework to maintain germline architecture in C. elegans.
- Published
- 2018
22. Implication of long-distance cytoplasmic transport into dynamics of local pH on the surface of microinjured Chara cells
- Author
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Alexander A. Bulychev and A.V. Komarova
- Subjects
Chlorophyll ,0106 biological sciences ,0301 basic medicine ,Cytoplasm ,Perforation (oil well) ,Plant Science ,Chara ,01 natural sciences ,Fluorescence ,Cell membrane ,03 medical and health sciences ,medicine ,Photosynthesis ,biology ,Cell Membrane ,Biological Transport ,Cell Biology ,General Medicine ,Hydrogen-Ion Concentration ,biology.organism_classification ,Cytoplasmic streaming ,Chloroplast ,Cytosol ,030104 developmental biology ,medicine.anatomical_structure ,Biochemistry ,Biophysics ,Microelectrodes ,Intracellular ,010606 plant biology & botany - Abstract
Cytoplasmic streaming is essential for intracellular communications but its specific functions are not well known. In Chara corallina internodes, long-distance interactions mediated by cyclosis are clearly evident with microscopy-pulse amplitude modulation (PAM) fluorometer under application of localized light (LL) pulses to a remote cell region. Measurements of LL-induced profiles of chlorophyll fluorescence F' at various distances from the LL source suggest that illuminated chloroplasts release into the streaming cytoplasm excess reducing equivalents that are entrained by the fluid flow and transiently reduce the intersystem electron carriers in chloroplasts of downstream shaded areas. The reducing equivalents propagate to distances up to 4.5 mm from the LL source, with the transport rate nearly equal to the velocity of liquid flow. The F' transients disappeared after the arrest of streaming with cytochalasin D and reappeared upon its recovery in washed cells. The F' responses to a distant LL were used as an indicator for the passage of cytosolic reductants across the analyzed cell area during measurements of cell surface pH (pHo) in intact and microperforated internodes. In microwounded cell regions, the LL-induced increase in F' occurred synchronously with the increase in pHo, by contrast to a slight decrease in pHo observed prior to perforation. The results show that reducing agents transported with the cytoplasmic flow are involved in rapid pH changes on the surface of microinjured cells. A possibility is considered that cytoplasmic reductants are processed by stress-activated plasmalemmal NADPH oxidase carrying electrons to oxygen with the eventual H+ consumption on the outer cell side.
- Published
- 2016
23. Dopamine and Their Antagonist Modulates Ion Transport and Cytoplasmic Streaming in Chara Cells
- Author
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Olga M. Zherelova, R. Sh. Shtanchaev, V. M. Grischenko, and Anatolii A. Kataev
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Chara ,biology ,Dopamine ,Chemistry ,Antagonist ,Biophysics ,medicine ,biology.organism_classification ,Ion transporter ,medicine.drug ,Cytoplasmic streaming - Published
- 2018
24. Functional Diversity of Class XI Myosins in Arabidopsis thaliana
- Author
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Zhongrui Duan, Kento Takahashi, Motoki Tominaga, Nanako Hagino, Akihiko Nakano, Takeshi Haraguchi, Yuko Miyatake, Kohji Ito, Yuno Shibuya, and Sa Rula
- Subjects
0106 biological sciences ,0301 basic medicine ,Arabidopsis thaliana ,Physiology ,Velocity ,Arabidopsis ,macromolecular substances ,Plant Science ,Myosins ,Genes, Plant ,Microfilament ,ATPase activity ,01 natural sciences ,03 medical and health sciences ,Myosin ,Promoter Regions, Genetic ,Gene ,Actin ,Glucuronidase ,Adenosine Triphosphatases ,Cloning ,biology ,Arabidopsis Proteins ,Regular Papers ,Cell Biology ,General Medicine ,biology.organism_classification ,Cell biology ,Cytoplasmic streaming ,Myosin XI ,030104 developmental biology ,Tissue-specific expression ,010606 plant biology & botany - Abstract
Plant myosin XI acts as a motive force for cytoplasmic streaming through interacting with actin filaments within the cell. Arabidopsis thaliana (At) has 13 genes belonging to the myosin XI family. Previous reverse genetic approaches suggest that At myosin XIs are partially redundant, but are functionally diverse for their specific tasks within the plant. However, the tissue-specific expression and enzymatic properties of myosin XIs have to date been poorly understood, primarily because of the difficulty in cloning and expressing large myosin XI genes and proteins. In this study, we cloned full-length cDNAs and promoter regions for all 13 At myosin XIs and identified tissue-specific expression (using promoter–reporter assays) and motile and enzymatic activities (using in vitro assays). In general, myosins belonging to the same class have similar velocities and ATPase activities. However, the velocities and ATPase activities of the 13 At myosin XIs are significantly different and are classified broadly into three groups based on velocity (high group, medium group and low group). Interestingly, the velocity groups appear roughly correlated with the tissue-specific expression patterns. Generally, ubiquitously expressed At myosin XIs belong to the medium-velocity group, pollen-specific At myosin XIs belong to the high-velocity group and only one At myosin XI (XI-I) is classified as belonging to the low-velocity group. In this study, we demonstrated the diversity of the 13 myosin XIs in Arabidopsis at the molecular and tissue levels. Our results indicate that myosin XIs in higher plants have distinct motile and enzymatic activities adapted for their specific roles.
- Published
- 2018
25. Developmentally regulated H2Av buffering via dynamic sequestration to lipid droplets in Drosophila embryos
- Author
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Matthew Richard Johnson, Roxan Amanda Stephenson, Sina Ghaemmaghami, and Michael A. Welte
- Subjects
0301 basic medicine ,Embryo, Nonmammalian ,lipid droplets ,Gene Dosage ,Cytoplasmic Streaming ,Midblastula ,Histones ,Lipid droplet ,Drosophila Proteins ,Biology (General) ,biology ,D. melanogaster ,Chemistry ,General Neuroscience ,Gene Expression Regulation, Developmental ,General Medicine ,Cell biology ,Histone ,Drosophila melanogaster ,Medicine ,H2Av ,Research Article ,QH301-705.5 ,Science ,Active Transport, Cell Nucleus ,Embryonic Development ,Histone exchange ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Chromosomes ,03 medical and health sciences ,Drosophila embryos ,Animals ,Blastoderm ,Interphase ,protein buffering ,Cell Nucleus ,General Immunology and Microbiology ,Cell Biology ,biology.organism_classification ,Kinetics ,030104 developmental biology ,Cytoplasm ,biology.protein ,Nuclear transport ,Developmental biology ,Developmental Biology - Abstract
Regulating nuclear histone balance is essential for survival, yet in early Drosophila melanogaster embryos many regulatory strategies employed in somatic cells are unavailable. Previous work had suggested that lipid droplets (LDs) buffer nuclear accumulation of the histone variant H2Av. Here, we elucidate the buffering mechanism and demonstrate that it is developmentally controlled. Using live imaging, we find that H2Av continuously exchanges between LDs. Our data suggest that the major driving force for H2Av accumulation in nuclei is H2Av abundance in the cytoplasm and that LD binding slows nuclear import kinetically, by limiting this cytoplasmic pool. Nuclear H2Av accumulation is indeed inversely regulated by overall buffering capacity. Histone exchange between LDs abruptly ceases during the midblastula transition, presumably to allow canonical regulatory mechanisms to take over. These findings provide a mechanistic basis for the emerging role of LDs as regulators of protein homeostasis and demonstrate that LDs can control developmental progression.
- Published
- 2018
26. The molecular mechanism and physiological role of cytoplasmic streaming
- Author
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Motoki Tominaga and Kohji Ito
- Subjects
fungi ,food and beverages ,Cytoplasmic Streaming ,Plant Science ,Biology ,Myosins ,biology.organism_classification ,Plant Physiological Phenomena ,Cell biology ,Cytoplasmic streaming ,Plant development ,Myosin ,Molecular mechanism ,Arabidopsis thaliana ,Plant Proteins - Abstract
Cytoplasmic streaming occurs widely in plants ranging from algae to angiosperms. However, the molecular mechanism and physiological role of cytoplasmic streaming have long remained unelucidated. Recent molecular genetic approaches have identified specific myosin members (XI-2 and XI-K as major and XI-1, XI-B, and XI-I as minor motive forces) for the generation of cytoplasmic streaming among 13 myosin XIs in Arabidopsis thaliana. Simultaneous knockout of these myosin XI members led to a reduced velocity of cytoplasmic streaming and marked defects of plant development. Furthermore, the artificial modifications of myosin XI-2 velocity changed plant and cell sizes along with the velocity of cytoplasmic streaming. Therefore, we assume that cytoplasmic streaming is one of the key regulators in determining plant size.
- Published
- 2015
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27. Correlation between electric potential and peristaltic behavior in Physarum polycephalum
- Author
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Changhong Liu, Yang Ye, Yi-Qing Qian, Ruo-nan Jia, and Yutong Zheng
- Subjects
Statistics and Probability ,Amoeboid movement ,Plasmodium (life cycle) ,biology ,Applied Mathematics ,Statistics as Topic ,Cytoplasmic Streaming ,Physarum polycephalum ,General Medicine ,Anatomy ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,Microscopic observation ,Cytoplasmic streaming ,Electromagnetic Fields ,Biological Clocks ,Cell Movement ,Modeling and Simulation ,parasitic diseases ,Peristalsis ,Electric potential ,Biological system - Abstract
Plasmodium of Physarum polycephalum is a model species of eukaryotic microorganisms for studying amoeboid movement. Plasmodium’s natural movements are characterized by the rhythmic back-and-forth streaming of cytoplasm peristalsis, which results in the directed locomotion of plasmodium, and the periodic change of the electric potential on the surface of plasmodium. Although it was suggested the causal connection between the cytoplasmic streaming and the electric potential in P. polycephalum , the relationship between its plasmodium peristaltic behavior and the surface electric potential had not been statistically proven. In this study, based on the modern microscopic observation and the new electric potential measurement, we proved the consistence between the frequency spectrums of the electric potential wave and the peristaltic wave during the growth of plasmodium and the synchronization of their waveforms through cross-correlational analysis. And we concluded that the correlation exists between the peristaltic wave and the electric potential wave. This study added new evidence to the hypothesis of the sharing inner biological mechanism between plasmodium’s peristaltic behavior and electric potential as previous studies indicated, and brought a new perspective towards the future research on amoeboid movement .
- Published
- 2015
28. Regulation of the formin cappuccino is critical for polarity ofDrosophilaoocytes
- Author
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Margot E. Quinlan, Justin S. Bois, and Batbileg Bor
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Mutant ,Cell Biology ,Biology ,Oocyte ,biology.organism_classification ,Phenotype ,Cell biology ,Cytoplasmic streaming ,medicine.anatomical_structure ,Structural Biology ,Formins ,medicine ,biology.protein ,Drosophila melanogaster ,Drosophila Protein ,Actin - Abstract
The Drosophila formin Cappuccino (Capu) creates an actin mesh-like structure that traverses the oocyte during midoogenesis. This mesh is thought to prevent premature onset of fast cytoplasmic streaming which normally happens during late-oogenesis. Proper cytoskeletal organization and cytoplasmic streaming are crucial for localization of polarity determinants such as osk, grk, bcd, and nanos mRNAs. Capu mutants disrupt these events, leading to female sterility. Capu is regulated by another nucleator, Spire, as well as by autoinhibition in vitro. Studies in vivo confirm that Spire modulates Capu's function in oocytes; however, how autoinhibition contributes is still unclear. To study the role of autoinhibition in flies, we expressed a Capu construct that is missing the Capu Inhibitory Domain, CapuΔN. Consistent with a gain of activity due to loss of autoinhibition, the actin mesh was denser in CapuΔN oocytes. Further, cytoplasmic streaming was delayed and fertility levels decreased. Localization of osk mRNA in early stages, and bcd and nanos in late stages, were disrupted in CapuΔN-expressing oocytes. Finally, evidence that these phenotypes were due to a loss of autoinhibition comes from coexpression of the N-terminal half of Capu with CapuΔN, which suppressed the defects in actin, cytoplasmic streaming and fertility. From these results, we conclude that Capu can be autoinhibited during Drosophila oocyte development. © 2014 Wiley Periodicals, Inc.
- Published
- 2015
29. Ethylene promotes pollen tube growth by affecting actin filament organization via the cGMP-dependent pathway in Arabidopsis thaliana
- Author
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Wantong Si, Xin Liu, Johannes Liesche, Honglei Jia, Jun Yang, Guo Junkang, Yanfeng Hu, and Jisheng Li
- Subjects
0301 basic medicine ,Ethylene ,Actin filament organization ,Arabidopsis ,Plant Science ,Pollen Tube ,Biology ,medicine.disease_cause ,03 medical and health sciences ,chemistry.chemical_compound ,Pollen ,medicine ,Arabidopsis thaliana ,Actin ,Cell Biology ,General Medicine ,Ethylenes ,biology.organism_classification ,Cell biology ,Cytoplasmic streaming ,Vesicular transport protein ,Actin Cytoskeleton ,030104 developmental biology ,chemistry ,Biochemistry ,Pollen tube - Abstract
Ethylene and cGMP are key regulators of plant developmental processes. In this study, we demonstrate that ethylene or cGMP promote pollen tube growth in a dose-dependent manner. The etr1-1 mutant was found to be insensitive to ethylene with regard to pollen tube growth, while the growth-promoting effect of ethylene in etr2-2, ein4-4, or ein4-7 did not change, suggesting that ethylene signaling was mainly perceived by ETR1. However, the function of cGMP was not inhibited in etr1-1 and pollen tubes became insensitive to ethylene when the endogenous cGMP level was artificially decreased. This shows that cGMP is necessary for the control of pollen tube growth and that it might be a downstream component of ETR1 in the ethylene signaling pathway. Our study also found that ethylene or cGMP increase the actin bundles and elevated the percentage of relative amount of F-actin, while removal of cGMP decreased actin bundles abundance and altered the ratio of F-actin in the tip and base regions of pollen tubes. In conclusion, our data suggests that ethylene functions as the upstream signal of cGMP, and that both signals promote pollen germination and tube growth by regulating F-actin, which is essential for vesicular transport and cytoplasmic streaming.
- Published
- 2017
30. Adenylyl cyclase mRNA localizes to the posterior of polarized DICTYOSTELIUM cells during chemotaxis
- Author
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Joshua Parker, Daniel R. Larson, Paul W. Kriebel, Wolfgang Losert, Carole A. Parent, Satarupa Das, Weiye Wang, and Can Guven
- Subjects
0301 basic medicine ,Cytoplasm ,mRNA ,Protozoan Proteins ,Cytoplasmic Streaming ,Biology ,Cycloheximide ,Regulatory Sequences, Ribonucleic Acid ,Dictyostelium discoideum ,RNA Transport ,Adenylyl cyclase ,03 medical and health sciences ,chemistry.chemical_compound ,Cell polarity ,Protein biosynthesis ,Animals ,Dictyostelium ,RNA, Messenger ,lcsh:QH573-671 ,skin and connective tissue diseases ,Cells, Cultured ,In Situ Hybridization, Fluorescence ,lcsh:Cytology ,Chemotaxis ,food and beverages ,Cell Polarity ,Cell Biology ,biology.organism_classification ,eye diseases ,Cell biology ,Vesicular transport protein ,stomatognathic diseases ,030104 developmental biology ,Signal relay ,chemistry ,Protein Biosynthesis ,RNA, Protozoan ,Research Article ,Adenylyl Cyclases ,Signal Transduction - Abstract
Background In Dictyostelium discoideum, vesicular transport of the adenylyl cyclase A (ACA) to the posterior of polarized cells is essential to relay exogenous 3′,5′-cyclic adenosine monophosphate (cAMP) signals during chemotaxis and for the collective migration of cells in head-to-tail arrangements called streams. Results Using fluorescence in situ hybridization (FISH), we discovered that the ACA mRNA is asymmetrically distributed at the posterior of polarized cells. Using both standard estimators and Monte Carlo simulation methods, we found that the ACA mRNA enrichment depends on the position of the cell within a stream, with the posterior localization of ACA mRNA being strongest for cells at the end of a stream. By monitoring the recovery of ACA-YFP after cycloheximide (CHX) treatment, we observed that ACA mRNA and newly synthesized ACA-YFP first emerge as fluorescent punctae that later accumulate to the posterior of cells. We also found that the ACA mRNA localization requires 3′ ACA cis-acting elements. Conclusions Together, our findings suggest that the asymmetric distribution of ACA mRNA allows the local translation and accumulation of ACA protein at the posterior of cells. These data represent a novel functional role for localized translation in the relay of chemotactic signal during chemotaxis. Electronic supplementary material The online version of this article (doi:10.1186/s12860-017-0139-7) contains supplementary material, which is available to authorized users.
- Published
- 2017
31. Probing the effect of tip pressure on fungal growth: Application to Aspergillus nidulans
- Author
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Gustavo R. Plaza, Qingxuan Li, Blanca González-Bermúdez, Gustavo V. Guinea, Miguel A. Peñalva, and Ministerio de Economía y Competitividad (España)
- Subjects
0301 basic medicine ,Hyphal growth ,Cytoplasm ,Hypha ,030106 microbiology ,Turgor pressure ,Hyphal tip ,Acrylic Resins ,Cytoplasmic Streaming ,Models, Biological ,Aspergillus nidulans ,03 medical and health sciences ,Cell Wall ,Pressure ,Growth rate ,Microscopy ,biology ,Chemistry ,fungi ,Water ,Equipment Design ,biology.organism_classification ,Cytoplasmic streaming ,Biomechanical Phenomena ,030104 developmental biology ,Biophysics - Abstract
The study of fungal cells is of great interest due to their importance as pathogens and as fermenting fungi and for their appropriateness as model organisms. The differential pressure between the hyphal cytoplasm and the bordering medium is essential for the growth process, because the pressure is correlated with the growth rate. Notably, during the invasion of tissues, the external pressure at the tip of the hypha may be different from the pressure in the surrounding medium. We report the use of a method, based on the micropipette-aspiration technique, to study the influence of this external pressure at the hyphal tip. Moreover, this technique makes it possible to study hyphal growth mechanics in the case of very thin hyphae, not accessible to turgor pressure probes.We found a correlation between the local pressure at the tip and the growth rate for the species Arpergillus nidulans. Importantly, the proposed method allows one to measure the pressure at the tip required to arrest the hyphal growth. Determining that pressure could be useful to develop newmedical treatments for fungal infections.Finally, we provide a mechanical model for these experiments, taking into account the cytoplasm flow and the wall deformation., The authors received support from the Ministerio de Economía y Competitividad, Spain, througth Projects No. MAT2016-76847-R, No. BIO2015-30695R, and No.MAT2016-79832-R.
- Published
- 2017
32. Myosin-driven transport network in plants is functionally robust and distinctive
- Author
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Bo Liu and Vitaly Citovsky
- Subjects
0301 basic medicine ,Multidisciplinary ,Cell division ,Arabidopsis Proteins ,Saccharomyces cerevisiae ,Arabidopsis ,Cytoplasmic Streaming ,Receptors, Cell Surface ,macromolecular substances ,Biology ,Myosins ,biology.organism_classification ,Plant Roots ,Cell biology ,Motor protein ,03 medical and health sciences ,Protein Transport ,030104 developmental biology ,Microtubule ,Commentaries ,Myosin ,Kinesin ,Endomembrane system ,Cytoskeleton ,Phylogeny - Abstract
Directional transport of intracellular cargoes by cytoskeleton-based motors is one of the signature features of eukaryotic cells. It was proposed that the last common ancestor of eukaryotes possessed several prototype motor proteins, including evolutionarily related kinesins and myosins (1, 2). Among these, there was an ancient myosin lineage that includes extant class V myosins conserved in animals, fungi, and Amoebozoa, and closely related class XI myosins conserved in green algae and plants (3, 4). Together with other recent studies, the paper by Kurth et al. in PNAS (5) uncovers a brand new mechanism underlying intracellular transport of myosin cargoes. Most importantly, the Kurth et al. paper shows that the green branch of the tree of life has evolved a very dense and largely unique endomembrane transport network empowered by myosins XI. It is well recognized that long-range cargo transport is actin-centric in fungal and plant cells but mostly relies on microtubule-based motors in vertebrates (6, 7). The transport systems based on myosins V and XI exhibit remarkable variability in their functions and molecular organization in fungi and plants, respectively. First of all, myosin XI motors have much higher velocities, often greater than one order-of-magnitude faster, than myosin V (8). Most of what is known on myosin V-driven transport in the budding yeast Saccharomyces cerevisiae has to do with the delivery of secretory vesicles and organelles to a growing bud of the daughter cell (6, 9). On the other hand, plants harness both diffuse and polar cell growth mechanisms and exhibit vigorous intracellular dynamics in their fully expanded cells (10). Despite these differences, it seems instructive to compare the myosin V-dependent transport of secretory vesicles in yeast to the myosin XI-dependent transport of endomembrane vesicles in plants based on the novel data and concepts presented by Kurth … [↵][1]1To whom correspondence should be addressed. Email: vitaly.citovsky{at}stonybrook.edu. [1]: #xref-corresp-1-1
- Published
- 2017
33. Myosin-driven transport network in plants
- Author
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Valera V. Peremyslov, Valerian V. Dolja, Eugene V. Koonin, Kira S. Makarova, Elizabeth G. Kurth, Jaime Iranzo, Sergei L. Mekhedov, and Hannah L. Turner
- Subjects
0106 biological sciences ,0301 basic medicine ,Genetics ,Multidisciplinary ,Biological Transport ,macromolecular substances ,Myosins ,Plants ,Biology ,Subcellular localization ,biology.organism_classification ,01 natural sciences ,Actins ,Cytoplasmic streaming ,03 medical and health sciences ,030104 developmental biology ,PNAS Plus ,Cytoplasm ,Arabidopsis ,Myosin ,Gene family ,Endomembrane system ,Gene knockout ,010606 plant biology & botany - Abstract
We investigate the myosin XI-driven transport network in Arabidopsis using protein-protein interaction, subcellular localization, gene knockout, and bioinformatics analyses. The two major groups of nodes in this network are myosins XI and their membrane-anchored receptors (MyoB) that, together, drive endomembrane trafficking and cytoplasmic streaming in the plant cells. The network shows high node connectivity and is dominated by generalists, with a smaller fraction of more specialized myosins and receptors. We show that interaction with myosins and association with motile vesicles are common properties of the MyoB family receptors. We identify previously uncharacterized myosin-binding proteins, putative myosin adaptors that belong to two unrelated families, with four members each (MadA and MadB). Surprisingly, MadA1 localizes to the nucleus and is rapidly transported to the cytoplasm, suggesting the existence of myosin XI-driven nucleocytoplasmic trafficking. In contrast, MadA2 and MadA3, as well as MadB1, partition between the cytosolic pools of motile endomembrane vesicles that colocalize with myosin XI-K and diffuse material that does not. Gene knockout analysis shows that MadB1-4 contribute to polarized root hair growth, phenocopying myosins, whereas MadA1-4 are redundant for this process. Phylogenetic analysis reveals congruent evolutionary histories of the myosin XI, MyoB, MadA, and MadB families. All these gene families emerged in green algae and show concurrent expansions via serial duplication in flowering plants. Thus, the myosin XI transport network increased in complexity and robustness concomitantly with the land colonization by flowering plants and, by inference, could have been a major contributor to this process.
- Published
- 2017
34. Endoplasmic-reticulum-mediated microtubule alignment governs cytoplasmic streaming
- Author
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Akatsuki Kimura, Yuta Shimamoto, Alexandre Mamane, J.-F. Joanny, Seiichi Uchida, Kenji Kimura, Tohru Sasaki, Lars Hufnagel, Kohta Sato, Ritsuya Niwayama, Jun Takagi, Physico-Chimie-Curie (PCC), Centre National de la Recherche Scientifique (CNRS)-Institut Curie [Paris]-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut de Chimie du CNRS (INC), and Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut Curie [Paris]-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
0301 basic medicine ,Zygote ,Green Fluorescent Proteins ,Cytoplasmic Streaming ,Biology ,Cytoplasmic Granules ,Endoplasmic Reticulum ,Microtubules ,Time-Lapse Imaging ,Xenopus laevis ,03 medical and health sciences ,0302 clinical medicine ,Microtubule ,RNA interference ,Animals ,Caenorhabditis elegans ,Cytoskeleton ,[PHYS]Physics [physics] ,Microscopy, Confocal ,Endoplasmic reticulum ,Cell Biology ,biology.organism_classification ,Cytoplasmic streaming ,Cell biology ,030104 developmental biology ,Hydrodynamics ,RNA Interference ,030217 neurology & neurosurgery - Abstract
Cytoplasmic streaming refers to a collective movement of cytoplasm observed in many cell types. The mechanism of meiotic cytoplasmic streaming (MeiCS) in Caenorhabditis elegans zygotes is puzzling as the direction of the flow is not predefined by cell polarity and occasionally reverses. Here, we demonstrate that the endoplasmic reticulum (ER) network structure is required for the collective flow. Using a combination of RNAi, microscopy and image processing of C. elegans zygotes, we devise a theoretical model, which reproduces and predicts the emergence and reversal of the flow. We propose a positive-feedback mechanism, where a local flow generated along a microtubule is transmitted to neighbouring regions through the ER. This, in turn, aligns microtubules over a broader area to self-organize the collective flow. The proposed model could be applicable to various cytoplasmic streaming phenomena in the absence of predefined polarity. The increased mobility of cortical granules by MeiCS correlates with the efficient exocytosis of the granules to protect the zygotes from osmotic and mechanical stresses.
- Published
- 2017
35. Lateral transport of photosynthetically active intermediate at rest and after excitation of Chara cells
- Author
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Alexander A. Bulychev and A.V. Komarova
- Subjects
Chara ,biology ,Biophysics ,Cell Biology ,Plant cell ,biology.organism_classification ,Photosynthesis ,Biochemistry ,Cytoplasmic streaming ,Chloroplast ,Cytoplasm ,Proton transport ,Chlorophyll fluorescence - Abstract
Cytoplasmic streaming is vital for plant cells; however, its relation to cell functions remains largely undisclosed. Microfluorometry of chloroplasts in vivo and measurements of cell surface pH under localized illumination of cell regions located upstream the cytoplasmic flow, at a distance of few millimeters from the analyzed area, is a new means to reveal the role of liquid flow for signal transmission in large cells, such as internodes of characean algae. Properties of photoinduced signals transmitted along the cell can be clarified by comparing the effects of pointed illumination under conditions of continuous and briefly arrested cytoplasmic flow. Chlorophyll fluorescence measurements with the use of saturation pulse method showed that excitation-induced cessation of cytoplasmic streaming, concomitant with the period of localized illumination, caused a significant delay and deceleration of the lateral transmission of the photoinduced signal and, in addition, diminished the peak of maximal fluorescence F m′ in the cell response to propagated signals. The relative extent of the peak suppression was small in cell regions producing light-dependent external alkaline zones and increased substantially for cell regions with slightly acidic external pH. These and other results indicate the possible role of cytoplasmic pH in controlling chlorophyll fluorescence and photosynthetic activity in vivo. When the period of streaming cessation coincided with localized illumination, the velocity of cytoplasmic flow recovered slower than after arrest of the flow without additional illumination. The results are promising for further analysis of regulatory and protective functions of cytoplasmic streaming in photosynthesizing plant cells.
- Published
- 2014
36. C. elegans Anillin proteins regulate intercellular bridge stability and germline syncytial organization
- Author
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Amy Shaub Maddox, Jean-Claude Labbé, Monique Zetka, Nicolas T. Chartier, Eugénie Goupil, Rana Amini, and Sara Labella
- Subjects
Male ,Scaffold protein ,endocrine system ,Cell division ,Cell ,Cytoplasmic Streaming ,Giant Cells ,Cell junction ,Article ,Germline ,Oogenesis ,medicine ,Animals ,Caenorhabditis elegans ,Caenorhabditis elegans Proteins ,Gonads ,Research Articles ,Genetics ,Syncytium ,biology ,Protein Stability ,Microfilament Proteins ,Correction ,Cell Biology ,biology.organism_classification ,Cell biology ,body regions ,Germ Cells ,Intercellular Junctions ,medicine.anatomical_structure ,Cytoplasm ,Larva ,Female ,Germ cell ,Cytokinesis - Abstract
The scaffold protein ANI-2 promotes germ cell syncytial organization and compensates for the mechanical stress associated with oogenesis by conferring stability and elasticity to germ cell intercellular bridges., Cytokinesis generally produces two separate daughter cells, but in some tissues daughter nuclei remain connected to a shared cytoplasm, or syncytium, through incomplete cytokinesis. How syncytia form remains poorly understood. We studied syncytial formation in the Caenorhabditis elegans germline, in which germ cells connect to a shared cytoplasm core (the rachis) via intercellular bridges. We found that syncytial architecture initiates early in larval development, and germ cells become progressively interconnected until adulthood. The short Anillin family scaffold protein ANI-2 is enriched at intercellular bridges from the onset of germ cell specification, and ANI-2 loss resulted in destabilization of intercellular bridges and germ cell multinucleation defects. These defects were partially rescued by depleting the canonical Anillin ANI-1 or blocking cytoplasmic streaming. ANI-2 is also required for elastic deformation of the gonad during ovulation. We propose that ANI-2 promotes germ cell syncytial organization and allows for compensation of the mechanical stress associated with oogenesis by conferring stability and elasticity to germ cell intercellular bridges.
- Published
- 2014
37. Cytoplasmic Streaming of a Plant Cell near the Freezing Point
- Author
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Komatsu Yosuke, Takao Inamura, Koji Fumoto, and Tsuyoshi Kawanami
- Subjects
biology ,cryopreservation ,biology.organism_classification ,Plant cell ,Cytoplasmic streaming ,Freezing point ,cytoplasmic streaming ,Biological Engineering ,Aquatic plant ,Freezing ,Botany ,Egeria densa ,Biophysics ,Peak value ,Directional solidification - Abstract
Microscopic observations of the cooling process in plant leaf cells have been performed using a directional solidification stage in order to study on the optimum freezing condition of living tissues. Till date, several studies on the freezing or melting of cells have been conducted. However, few researchers have studied cells near the freezing point. In this study, a temperature-controlled stage was created in order to investigate the effect of cell temperature on cytoplasmic streaming, and the cells of an aquatic plant (Egeria densa ) were used. The result showed that cytoplasmic streaming is greatly affected by ambient temperature and shift in temperature conditions. Moreover, the velocity of cytoplasmic streaming has a peak value at a particular temperature, and it does not recover soon after heating from a cold state.
- Published
- 2014
38. Endoplasmic reticulum-targeted GFP reveals ER remodeling in Mesorhizobium-treated Lotus japonicus root hairs during root hair curling and infection thread formation
- Author
-
Robert W. Ridge, H. Kouchi, and Francine Perrine-Walker
- Subjects
integumentary system ,biology ,Cortical endoplasmic reticulum ,Endoplasmic reticulum ,Green Fluorescent Proteins ,fungi ,Lotus japonicus ,Mesorhizobium ,Cell Biology ,Plant Science ,General Medicine ,Root hair ,Endoplasmic Reticulum ,biology.organism_classification ,Plant Roots ,Green fluorescent protein ,Cytoplasmic streaming ,Mesorhizobium loti ,Cell biology ,Gene Expression Regulation, Plant ,Botany ,Lotus ,sense organs ,Symbiosis - Abstract
The endoplasmic reticulum (ER) of the model legume Lotus japonicus was visualized using green fluorescent protein (GFP) fused with the KDEL sequence to investigate the changes in the root hair cortical ER in the presence or absence of Mesorhizobium loti using live fluorescence imaging. Uninoculated root hairs displayed dynamic forms of ER, ranging from a highly condensed form to an open reticulum. In the presence of M. loti, a highly dynamic condensed form of the ER linked with the nucleus was found in deformed, curled, and infected root hairs, similar to that in uninoculated and inoculated growing zone I and II root hairs. An open reticulum was primarily found in mature inoculated zone III root hairs, similar to that found in inactive deformed/curled root hairs and infected root hairs with aborted infection threads. Co-imaging of GFP-labeled ER with light transmission demonstrated a correlation between the mobility of the ER and other organelles and the directionality of the cytoplasmic streaming in root hairs in the early stages of infection thread formation and growth. ER remodeling in root hair cells is discussed in terms of possible biological significance during root hair growth, deformation/curling, and infection in the Mesorhizobium-L. japonicus symbiosis.
- Published
- 2013
39. Understanding myosin functions in plants: are we there yet?
- Author
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Andreas Nebenführ and Stephanie L Madison
- Subjects
Organelles ,Genetics ,Cytoplasm ,biology ,Arabidopsis ,macromolecular substances ,Plant Science ,Myosins ,Actin cytoskeleton ,biology.organism_classification ,Physcomitrella patens ,Models, Biological ,Bryopsida ,Cell Physiological Phenomena ,Cell biology ,Cytoplasmic streaming ,Motor protein ,Actin Cytoskeleton ,Mutation ,Myosin ,Genetic redundancy ,Actin ,Plant Proteins - Abstract
Myosins are motor proteins that drive movements along actin filaments and have long been assumed to be responsible for cytoplasmic streaming in plant cells. This conjecture is now firmly established by genetic analysis in the reference species, Arabidopsis thaliana. This work and similar approaches in the moss, Physcomitrella patens, also established that myosin-driven movements are necessary for cell growth and polarity, organelle distribution and shape, and actin organization and dynamics. Identification of a mechanistic link between intracellular movements and cell expansion has proven more challenging, not the least because of the high level of apparent genetic redundancy among myosin family members. Recent progress in the creation of functional complementation constructs and identification of interaction partners promises a way out of this dilemma.
- Published
- 2013
40. Cellular organization in germ tube tips ofGigasporaand its phylogenetic implications
- Author
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Stephen P. Bentivenga, Robert W. Roberson, T. K. Arun Kumar, David J. McLaughlin, and Leticia Kumar
- Subjects
0106 biological sciences ,0301 basic medicine ,Hypha ,Physiology ,Hyphae ,Germ tube ,Biology ,01 natural sciences ,law.invention ,Glomeromycota ,03 medical and health sciences ,Microscopy, Electron, Transmission ,Cell Wall ,law ,Botany ,Genetics ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Organelles ,Obligate ,fungi ,Spitzenkörper ,Cell Biology ,General Medicine ,biology.organism_classification ,Biological Evolution ,Cell biology ,Cytoplasmic streaming ,030104 developmental biology ,Cytoplasm ,Electron microscope ,010606 plant biology & botany - Abstract
Comparative morphology of the fine struc- ture of fungal hyphal tips often is phylogenetically informative. In particular, morphology of the Spit- zenkorper varies among higher taxa. To date no one has thoroughly characterized the hyphal tips of members of the phylum Glomeromycota to compare them with other fungi. This is partly due to difficulty growing and manipulating living hyphae of these obligate symbionts. We observed growing germ tubes of Gigaspora gigantea, G. margarita and G. rosea with a combination of light microscopy (LM) and transmis- sion electron microscopy (TEM). For TEM, we used both traditional chemical fixation and cryo-fixation methods. Germ tubes of all species were extremely sensitive to manipulation. Healthy germ tubes often showed rapid bidirectional cytoplasmic streaming, whereas germ tubes that had been disturbed showed reduced or no cytoplasmic movement. Actively growing germ tubes contain a cluster of 10-20 spherical bodies approximately 3-8 mm behind the apex. The bodies, which we hypothesize are lipid bodies, move rapidly in healthy germ tubes. These bodies disappear immediately after any cellular perturbation. Cells prepared with cryo-techniques had superior preservation compared to those that had been processed with traditional chemical proto- cols. For example, cryo-prepared samples displayed two cell-wall layers, at least three vesicle types near the tip and three distinct cytoplasmic zones were noted. We did not detect a Spitzenkorper with either LM or TEM techniques and the tip organization of Gigaspora germ tubes appeared to be similar to hyphae in zygomycetous fungi. This observation was supported by a phylogenetic analysis of microscopic characters of hyphal tips from members of five fungal phyla. Our work emphasizes the sensitive nature of cellular organization, and the need for as little manipulation as possible to observe germ tube structure accurately.
- Published
- 2013
41. Synchronous Induction of Detachment and Reattachment of Symbiotic Chlorella spp. from the Cell Cortex of the Host Paramecium bursaria
- Author
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Yuuki Kodama and Masahiro Fujishima
- Subjects
Paramecium ,biology ,Endosymbiosis ,Centrifugation ,Chlorella ,Vacuole ,biology.organism_classification ,Microbiology ,Cytoplasmic streaming ,Cell biology ,Paramecium bursaria ,Algae ,Organelle ,Cell cortex ,Botany ,Cell Adhesion ,Symbiosis - Abstract
Paramecium bursaria harbor several hundred symbiotic Chlorella spp. Each alga is enclosed in a perialgal vacuole membrane, which can attach to the host cell cortex. How the perialgal vacuole attaches beneath the host cell cortex remains unknown. High-speed centrifugation (> 1000×g) for 1min induces rapid detachment of the algae from the host cell cortex and concentrates the algae to the posterior half of the host cell. Simultaneously, most of the host acidosomes and lysosomes accumulate in the anterior half of the host cell. Both the detached algae and the dislocated acidic vesicles recover their original positions by host cyclosis within 10min after centrifugation. These recoveries were inhibited if the host cytoplasmic streaming was arrested by nocodazole. Endosymbiotic algae during the early reinfection process also show the capability of desorption after centrifugation. These results demonstrate that adhesion of the perialgal vacuole beneath the host cell cortex is repeatedly inducible, and that host cytoplasmic streaming facilitates recovery of the algal attachment. This study is the first report to illuminate the mechanism of the induction to desorb for symbiotic algae and acidic vesicles, and will contribute to the understanding of the mechanism of algal and organelle arrangements in Paramecium.
- Published
- 2013
42. Cyclosis-mediated transfer of H2O2 elicited by localized illumination of Chara cells and its relevance to the formation of pH bands
- Author
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Alexander A. Bulychev, Alexey Eremin, and Marcus J. B. Hauser
- Subjects
Light ,Cytochalasin B ,Intracellular Space ,Cytoplasmic Streaming ,Plant Science ,Biology ,Photosynthesis ,Chara ,Fluorescence ,chemistry.chemical_compound ,Hydrogen Peroxide ,Cell Biology ,General Medicine ,Darkness ,Hydrogen-Ion Concentration ,Fluoresceins ,Plant cell ,biology.organism_classification ,Cytoplasmic streaming ,Chloroplast ,Biochemistry ,chemistry ,Cytoplasm ,Biophysics - Abstract
Cytoplasmic streaming occurs in most plant cells and is vitally important for large cells as a means of long-distance intracellular transport of metabolites and messengers. In internodal cells of characean algae, cyclosis participates in formation of light-dependent patterns of surface pH and photosynthetic activity, but lateral transport of regulatory metabolites has not been visualized yet. Hydrogen peroxide, being a signaling molecule and a stress factor, is known to accumulate under excessive irradiance. This study was aimed to examine whether H2O2 produced in chloroplasts under high light conditions is released into streaming fluid and transported downstream by cytoplasmic flow. To this end, internodes of Chara corallina were loaded with the fluorogenic probe dihydrodichlorofluorescein diacetate and illuminated locally by a narrow light beam through a thin optic fiber. Fluorescence of dihydrodichlorofluorescein (DCF), produced upon oxidation of the probe by H2O2, was measured within and around the illuminated cell region. In cells exhibiting active streaming, H2O2 first accumulated in the illuminated region and then entered into the streaming cytoplasm, giving rise to the expansion of DCF fluorescence downstream of the illuminated area. Inhibition of cyclosis by cytochalasin B prevented the spreading of DCF fluorescence along the internode. The results suggest that H2O2 released from chloroplasts under high light is transported along the cell with the cytoplasmic flow. It is proposed that the shift of cytoplasmic redox poise and light-induced elevation of cytoplasmic pH facilitate the opening of H(+)/OH(-)-permeable channels in the plasma membrane.
- Published
- 2013
43. Switch-like reprogramming of gene expression after fusion of multinucleate plasmodial cells of two Physarum polycephalum sporulation mutants
- Author
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Britta Ebeling, Markus Haas, Wolfgang Marwan, Pauline Walter, and Xenia-Katharina Hoffmann
- Subjects
Cytoplasm ,Light ,Cellular differentiation ,Spores, Protozoan ,Population ,Protozoan Proteins ,Biophysics ,Cytoplasmic Streaming ,Gene Expression ,Physarum polycephalum ,Giant Cells ,Biochemistry ,Multinucleate ,education ,Molecular Biology ,Heterokaryon ,education.field_of_study ,biology ,Plasmodium (life cycle) ,Reverse Transcriptase Polymerase Chain Reaction ,Gene Expression Profiling ,Cell Biology ,biology.organism_classification ,Cell biology ,Mutation ,Reprogramming - Abstract
Nonlinear dynamic processes involving the differential regulation of transcription factors are considered to impact the reprogramming of stem cells, germ cells, and somatic cells. Here, we fused two multinucleate plasmodial cells of Physarum polycephalum mutants defective in different sporulation control genes while being in different physiological states. The resulting heterokaryons established one of two significantly different expression patterns of marker genes while the plasmodial halves that were fused to each other synchronized spontaneously. Spontaneous synchronization suggests that switch-like control mechanisms spread over and finally control the entire plasmodium as a result of cytoplasmic mixing. Regulatory molecules due to the large volume of the vigorously streaming cytoplasm will define concentrations in acting on the population of nuclei and in the global setting of switches. Mixing of a large cytoplasmic volume is expected to damp stochasticity when individual nuclei deliver certain RNAs at low copy number into the cytoplasm. We conclude that spontaneous synchronization, the damping of molecular noise in gene expression by the large cytoplasmic volume, and the option to take multiple macroscopic samples from the same plasmodium provide unique options for studying the dynamics of cellular reprogramming at the single cell level.
- Published
- 2013
44. Myosin-II-Mediated Directional Migration of Dictyostelium Cells in Response to Cyclic Stretching of Substratum
- Author
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Kazuyuki Minami, Yoshiaki Iwadate, Yuta Nakashima, Masatsune Tsujioka, Katsuya Sato, and Chika Okimura
- Subjects
Green Fluorescent Proteins ,Biophysics ,Cytoplasmic Streaming ,macromolecular substances ,Green fluorescent protein ,chemistry.chemical_compound ,Adenosine Triphosphate ,Cell Movement ,Myosin ,Animals ,Osmotic pressure ,Dictyostelium ,Pseudopodia ,Myosin Type II ,biology ,Hydrolysis ,biology.organism_classification ,Cytoplasmic streaming ,chemistry ,Biochemistry ,Cell Biophysics ,Mutation ,Stress, Mechanical ,Adenosine triphosphate ,Intracellular - Abstract
Living cells are constantly subjected to various mechanical stimulations, such as shear flow, osmotic pressure, and hardness of substratum. They must sense the mechanical aspects of their environment and respond appropriately for proper cell function. Cells adhering to substrata must receive and respond to mechanical stimuli from the substrata to decide their shape and/or migrating direction. In response to cyclic stretching of the elastic substratum, intracellular stress fibers in fibroblasts and endothelial, osteosarcoma, and smooth muscle cells are rearranged perpendicular to the stretching direction, and the shape of those cells becomes extended in this new direction. In the case of migrating Dictyostelium cells, cyclic stretching regulates the direction of migration, and not the shape, of the cell. The cells migrate in a direction perpendicular to that of the stretching. However, the molecular mechanisms that induce the directional migration remain unknown. Here, using a microstretching device, we recorded green fluorescent protein (GFP)-myosin-II dynamics in Dictyostelium cells on an elastic substratum under cyclic stretching. Repeated stretching induced myosin II localization equally on both stretching sides in the cells. Although myosin-II-null cells migrated randomly, myosin-II-null cells expressing a variant of myosin II that cannot hydrolyze ATP migrated perpendicular to the stretching. These results indicate that Dictyostelium cells accumulate myosin II at the portion of the cell where a large strain is received and migrate in a direction other than that of the portion where myosin II accumulated. This polarity generation for migration does not require the contraction of actomyosin.
- Published
- 2013
- Full Text
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45. Cytosolic streaming in vegetative mycelium and aerial structures of aspergillus niger
- Author
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Han A. B. Wösten, Jan Dijksterhuis, Robert-Jan Bleichrodt, Arman Vinck, M.R. van Leeuwen, and Pauline Krijgsheld
- Subjects
Hypha ,biology ,Vegetative reproduction ,aerial hypha ,Aspergillus niger ,fungus ,fungi ,RNA ,food and beverages ,conidia ,conidiophore ,Plant Science ,Articles ,biology.organism_classification ,Agricultural and Biological Sciences (miscellaneous) ,Green fluorescent protein ,Conidium ,Cytoplasmic streaming ,Aspergillus ,cytoplasmic streaming ,Botany ,development ,Mycelium ,vegetative mycelium - Abstract
Aspergillus niger forms aerial hyphae and conidiophores after a period of vegetative growth. The hyphae within the mycelium of A. niger are divided by septa. The central pore in these septa allows for cytoplasmic streaming. Here, we studied inter- and intra-compartmental streaming of the reporter protein GFP in A. niger. Expression of the gene encoding nuclear targeted GFP from the gpdA or glaA promoter resulted in strong fluorescence of nuclei within the vegetative hyphae and weak fluorescence in nuclei within the aerial structures. These data and nuclear run on experiments showed that gpdA and glaA are higher expressed in the vegetative mycelium when compared to aerial hyphae, conidiophores and conidia. Notably, gpdA or glaA driven expression of the gene encoding cytosolic GFP resulted in strongly fluorescent vegetative hyphae and aerial structures. Apparently, GFP streams from vegetative hyphae into aerial structures. This was confirmed by monitoring fluorescence of photo-activatable GFP (PA-GFP). In contrast, PA-GFP did not stream from aerial structures to vegetative hyphae. Streaming of PA-GFP within vegetative hyphae or within aerial structures of A. niger occurred at a rate of 10-15 μm s-1. Taken together, these results not only show that GFP streams from the vegetative mycelium to aerial structures but it also indicates that its encoding RNA is not streaming. Absence of RNA streaming would explain why distinct RNA profiles were found in aerial structures and the vegetative mycelium by nuclear run on analysis and micro-array analysis. © CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.
- Published
- 2013
46. Fluorescence transients in chloroplasts of Chara corallina cells during transmission of photoinduced signal with the streaming cytoplasm
- Author
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Andrei B. Rubin, A. Alova, and Alexander A. Bulychev
- Subjects
Chloroplast ,Cytoplasm ,Non-photochemical quenching ,Botany ,Biophysics ,Green algae ,Plant Science ,Biology ,biology.organism_classification ,Photosynthesis ,Chlorophyll fluorescence ,Fluorescence ,Cytoplasmic streaming - Abstract
Intracellular transport assisted by rotatory cytoplasmic movement in characean green algae exerts regulatory influence on plasmalemmal ion channels and photosynthetic activity of chloroplasts. In internodal cells of Chara corallina Klein ex Willd., the photoinduced signal transmitted with the flow of streaming cytoplasm for a distance of 1–3 mm from the site of its emergence was found to release or enhance non-photochemical quenching of chlorophyll fluorescence, depending on the intensity of background illumination in the analyzed area. Under dim background irradiance (10–30 μmol quanta/(m2s)), the distant signal transferred from brightly illuminated 0.4-mm-wide area elicited a transient increase in maximal (F′m) and actual (F) fluorescence. However, at higher background irradiances, the arrival of the same signal resulted in strong quenching of F′m and in transitory changes of F. The transformation of “low light response” to F′m changes of opposite polarity occurred at some threshold irradiance. Hence, even slight variations in irradiance at the chloroplast layer, attributed to structural features of characean internodes, might promote formation of uneven photosynthetic profile under the influence of signals transmitted along the cell with the cytoplasmic flow. Analysis of chloroplast fluorescence in situ as a function of pH in experiments with intracellular perfusion indicated that the initial response to a distant light stimulus is caused by the transient increase in cytoplasmic pH in the area of fluorescence measurements.
- Published
- 2012
47. Polar auxin transport in relation to long-distance transport of nutrients in the Charales: Table 1
- Author
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John A. Raven
- Subjects
chemistry.chemical_classification ,Chara ,animal structures ,biology ,Physiology ,fungi ,Charophyceae ,food and beverages ,Xylem ,Plant Science ,biology.organism_classification ,Cytoplasmic streaming ,fluids and secretions ,chemistry ,Auxin ,Botany ,cardiovascular system ,Charales ,Bryophyte ,Polar auxin transport - Abstract
This paper examines the significance of the recent demonstration of polar auxin transport (PAT) in the green macroalga Chara (Charophyceae: Charales) and, especially, options for explaining some features of PAT in the Charales. The occurrence of PAT in the Charales shows that PAT originated in the algal ancestors of the embryophytes (liverworts, mosses, hornworts, and vascular plants), although it is not yet known if PAT occurs elsewhere in the Charophyceae or in other algae. While in the embryophytes PAT occurs in parenchymatously constructed structures which commonly also have xylem and phloem (or their bryophyte analogues) as long-distance transport processes in parallel to PAT, in Chara corallina PAT shares the pathway for long-distance transport of nutrients though the parenchymatously constructed nodal complexes and the single giant cells of the internode. The speed of auxin movement of PAT is much more rapid than that attributable to diffusion and of the same order as the rate of cytoplasmic streaming in the giant internodal cells, yet complete inhibition of streaming by the inhibitor cytochalasin H does not slow down auxin transport. Explanations for this phenomenon are sought in the operation of other mechanochemical motors, dynein-tubulin and kinesin-tubulin, as alternatives to the myosin-actin system which powers cytoplasmic streaming. Experiments in which microtubules are disrupted, for example by colchicine, could show if one of the tubulin-based motors is involved. If these motors are involved, some mechanism is needed to amplify the speeds known for the motors to explain the order of magnitude higher speeds seen for auxin transport.
- Published
- 2012
48. Hyphal heterogeneity inAspergillus oryzaeis the result of dynamic closure of septa by Woronin bodies
- Author
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Katsuhiko Kitamoto, Brand Recter, Han A. B. Wösten, Robert-Jan Bleichrodt, G. Jerre van Veluw, and Jun-ichi Maruyama
- Subjects
Hypha ,Strain (chemistry) ,fungi ,Biology ,biology.organism_classification ,Microbiology ,Cytoplasmic streaming ,Cell biology ,Aspergillus oryzae ,Woronin body ,Cytoplasm ,Organelle ,Molecular Biology ,Mycelium - Abstract
Summary Hyphae of higher fungi are compartmentalized by septa. These septa contain a central pore that allows for inter-compartmental and inter-hyphal cytoplasmic streaming. The cytoplasm within the mycelium is therefore considered to be a continuous system. In this study, however, we demonstrate by laser dissection that 40% of the apical septa of exploring hyphae of Aspergillus oryzae are closed. Closure of septa correlated with the presence of a peroxisome-derived organelle, known as Woronin body, near the septal pore. The location of Woronin bodies in the hyphae was dynamic and, as a result, plugging of the septal pore was reversible. Septal plugging was abolished in a ΔAohex1 strain that cannot form Woronin bodies. Notably, hyphal heterogeneity was also affected in the ΔAohex1 strain. Wild-type strains of A. oryzae showed heterogeneous distribution of GFP between neighbouring hyphae at the outer part of the colony when the reporter was expressed from the promoter of the glucoamylase gene glaA or the α-glucuronidase gene aguA. In contrast, GFP fluorescence showed a normal distribution in the case of the ΔAohex1 strain. Taken together, it is concluded that Woronin bodies maintain hyphal heterogeneity in a fungal mycelium by impeding cytoplasmic continuity.
- Published
- 2012
49. Bayesian Inference of Forces Causing Cytoplasmic Streaming in Caenorhabditis elegans Embryos and Mouse Oocytes
- Author
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Tomoyuki Higuchi, Tomoya S. Kitajima, Kyosuke Shinohara, Akatsuki Kimura, Ritsuya Niwayama, Takuji Ishikawa, Hiromichi Nagao, and Lars Hufnagel
- Subjects
0301 basic medicine ,Embryology ,Cytoplasm ,Nematoda ,lcsh:Medicine ,Cytoplasmic Streaming ,Mice ,0302 clinical medicine ,Animal Cells ,lcsh:Science ,Shear Stresses ,Caenorhabditis elegans ,Likelihood Functions ,Multidisciplinary ,biology ,Physics ,Classical Mechanics ,Anatomy ,Animal Models ,Cytoplasmic streaming ,Cell Motility ,OVA ,Physical Sciences ,Mechanical Stress ,Cellular Types ,Cellular Structures and Organelles ,Research Article ,Fluid Mechanics ,Research and Analysis Methods ,Continuum Mechanics ,Models, Biological ,03 medical and health sciences ,Model Organisms ,Cell cortex ,Shear stress ,Animals ,Actin ,Pressure gradient ,Meiosis II ,lcsh:R ,Embryos ,Organisms ,Biology and Life Sciences ,Fluid Dynamics ,Bayes Theorem ,Cell Biology ,biology.organism_classification ,Invertebrates ,Flow Field ,030104 developmental biology ,Germ Cells ,Biophysics ,Caenorhabditis ,Oocytes ,Hydrodynamics ,lcsh:Q ,Stress, Mechanical ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Cellular structures are hydrodynamically interconnected, such that force generation in one location can move distal structures. One example of this phenomenon is cytoplasmic streaming, whereby active forces at the cell cortex induce streaming of the entire cytoplasm. However, it is not known how the spatial distribution and magnitude of these forces move distant objects within the cell. To address this issue, we developed a computational method that used cytoplasm hydrodynamics to infer the spatial distribution of shear stress at the cell cortex induced by active force generators from experimentally obtained flow field of cytoplasmic streaming. By applying this method, we determined the shear-stress distribution that quantitatively reproduces in vivo flow fields in Caenorhabditis elegans embryos and mouse oocytes during meiosis II. Shear stress in mouse oocytes were predicted to localize to a narrower cortical region than that with a high cortical flow velocity and corresponded with the localization of the cortical actin cap. The predicted patterns of pressure gradient in both species were consistent with species-specific cytoplasmic streaming functions. The shear-stress distribution inferred by our method can contribute to the characterization of active force generation driving biological streaming.
- Published
- 2016
50. Nucleus-associated actin in Amoeba proteus
- Author
-
Mariia Berdieva, D. S. Bogolyubov, A. V. Goodkov, and Yuliya Podlipaeva
- Subjects
0301 basic medicine ,food.ingredient ,Arp2/3 complex ,macromolecular substances ,Microbiology ,Polymerization ,Amoeba (genus) ,03 medical and health sciences ,food ,Amoeba ,Cell Nucleus ,biology ,Actin remodeling ,Actin cytoskeleton ,Amoeba proteus ,biology.organism_classification ,Bridged Bicyclo Compounds, Heterocyclic ,Immunohistochemistry ,Actins ,Chromatin ,Cytoplasmic streaming ,Cell biology ,030104 developmental biology ,Destrin ,biology.protein ,Latrunculin ,Thiazolidines ,MDia1 - Abstract
The presence, spatial distribution and forms of intranuclear and nucleus-associated cytoplasmic actin were studied in Amoeba proteus with immunocytochemical approaches. Labeling with different anti-actin antibodies and staining with TRITC-phalloidin and fluorescent deoxyribonuclease I were used. We showed that actin is abundant within the nucleus as well as in the cytoplasm of A. proteus cells. According to DNase I experiments, the predominant form of intranuclear actin is G-actin which is associated with chromatin strands. Besides, unpolymerized actin was shown to participate in organization of a prominent actin layer adjacent to the outer surface of nuclear envelope. No significant amount of F-actin was found in the nucleus. At the same time, the amoeba nucleus is enclosed in a basket-like structure formed by circumnuclear actin filaments and bundles connected with global cytoplasmic actin cytoskeleton. A supposed architectural function of actin filaments was studied by treatment with actin-depolymerizing agent latrunculin A. It disassembled the circumnuclear actin system, but did not affect the intranuclear chromatin structure. The results obtained for amoeba cells support the modern concept that actin is involved in fundamental nuclear processes that have evolved in the cells of multicellular organisms.
- Published
- 2016
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